View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17833_low_64 (Length: 369)
Name: NF17833_low_64
Description: NF17833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17833_low_64 |
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Alignment Details
Target: chr7 (Bit Score: 326; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 1 - 352
Target Start/End: Original strand, 32223364 - 32223721
Alignment:
| Q |
1 |
acctgttttaatttgtctagtttaggtctcccccagttttcaactttcaatttcaaattattactatatggttaatgtagta-----agatgaaagaaag |
95 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
32223364 |
acctgttttaatttgtctagtttaggtctcccccagttttcaactttcaatttcaaattattactatatggttaatgtagtatagtaagatgaaagaaag |
32223463 |
T |
|
| Q |
96 |
caagattcacagctccactagtagtagaaatagaaatggaaattaaaacaa-ggccattgaattctggtgcaaggtacagaactttagcaacacctgtat |
194 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32223464 |
caagattcacagctccactaatagtagaaatagaaatggaaattaaaacaaaggccattgaattctggtgcaaggtacagaactttagcaacacctgtat |
32223563 |
T |
|
| Q |
195 |
agaaaaatgaagcaacaaatttcgtctttgttgaatatacatccgtcactcattgtttggtcattctctaaccaccaccatcaccaccacactaacccct |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32223564 |
agaaaaatgaagcaacaaatttcgtctttgttgaatatacatccgtcactcattgtttggtcattctctaaccaccaccatcaccaccacactaacccct |
32223663 |
T |
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| Q |
295 |
atgcaattaaacttaactctggtttactcactccccattcacatacagccacattcat |
352 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32223664 |
atgcaattaaacttaactctggtttactcactccccattcacatacagccacattcat |
32223721 |
T |
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