View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17834_low_13 (Length: 246)
Name: NF17834_low_13
Description: NF17834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17834_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 230
Target Start/End: Complemental strand, 47042488 - 47042269
Alignment:
| Q |
11 |
cataggagtaacgggactttgagtagcagctagcgatgattgataaacaaacttggtcaagattttcatagttatgatgttgttttataaggaaaaatca |
110 |
Q |
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| T |
47042488 |
catagaagtaacgggactttgagtagcagctagcgatgattgataaacaaacttggtcaagattttcatagttatgatgttgttttataaggacaaatca |
47042389 |
T |
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| Q |
111 |
gcatacaaggatgatgaaaataaaatgtttcattctaattggaaacattcaaatttgaaatagcatttttcgatgaggttaaaatgaccaacaccccaac |
210 |
Q |
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| T |
47042388 |
gcatacaaggatgttgaaaataaaatgtttcattctaactggaaacattcaaatttgaaatagcatttttcgatgaggttaaaatgaccaacactccaac |
47042289 |
T |
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| Q |
211 |
gagtcaggggtagaaaaagc |
230 |
Q |
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| T |
47042288 |
gagtcaggggtagaaaaagc |
47042269 |
T |
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