View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17835_low_7 (Length: 381)

Name: NF17835_low_7
Description: NF17835
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17835_low_7
NF17835_low_7
[»] chr1 (44 HSPs)
chr1 (7-381)||(50001193-50001566)
chr1 (18-381)||(29763605-29763967)
chr1 (3-333)||(46197703-46198032)
chr1 (160-313)||(17901916-17902070)
chr1 (199-380)||(297075-297255)
chr1 (3-82)||(12327701-12327780)
chr1 (18-82)||(51336494-51336558)
chr1 (210-313)||(6833951-6834053)
chr1 (44-130)||(13302869-13302955)
chr1 (160-261)||(34392601-34392704)
chr1 (44-130)||(4595852-4595938)
chr1 (160-261)||(8306440-8306542)
chr1 (44-110)||(24723350-24723415)
chr1 (44-142)||(42697739-42697837)
chr1 (290-379)||(8276234-8276323)
chr1 (3-72)||(24007183-24007252)
chr1 (45-97)||(19676711-19676763)
chr1 (45-97)||(21046049-21046101)
chr1 (162-261)||(21188149-21188249)
chr1 (44-82)||(7051921-7051959)
chr1 (31-97)||(16058300-16058366)
chr1 (3-65)||(21995622-21995684)
chr1 (199-261)||(22130178-22130240)
chr1 (162-227)||(44822246-44822312)
chr1 (199-257)||(45574172-45574230)
chr1 (297-366)||(28313082-28313151)
chr1 (44-97)||(42913049-42913102)
chr1 (162-261)||(7052129-7052229)
chr1 (44-266)||(21239048-21239264)
chr1 (189-261)||(24723604-24723676)
chr1 (45-120)||(21708127-21708201)
chr1 (45-120)||(21712670-21712744)
chr1 (201-256)||(23194667-23194722)
chr1 (44-131)||(45755486-45755573)
chr1 (44-130)||(22350684-22350769)
chr1 (30-120)||(41373348-41373437)
chr1 (45-97)||(20633631-20633683)
chr1 (199-255)||(28313192-28313248)
chr1 (244-295)||(35894013-35894063)
chr1 (44-110)||(7320593-7320658)
chr1 (45-75)||(22145666-22145696)
chr1 (44-82)||(51324519-51324557)
chr1 (44-81)||(24727383-24727420)
chr1 (44-120)||(48444369-48444444)
[»] chr5 (40 HSPs)
chr5 (19-381)||(17011445-17011806)
chr5 (3-381)||(29448557-29448934)
chr5 (45-319)||(265817-266090)
chr5 (199-381)||(33472716-33472897)
chr5 (199-380)||(27868727-27868907)
chr5 (3-112)||(10774622-10774730)
chr5 (199-381)||(41875745-41875926)
chr5 (171-261)||(21503975-21504065)
chr5 (44-130)||(20469175-20469261)
chr5 (44-130)||(21617927-21618013)
chr5 (5-82)||(31456975-31457052)
chr5 (3-82)||(30616629-30616708)
chr5 (199-368)||(9776837-9777005)
chr5 (125-261)||(20313111-20313248)
chr5 (162-265)||(36508859-36508963)
chr5 (162-258)||(17875896-17875993)
chr5 (44-120)||(25249827-25249903)
chr5 (44-120)||(25313611-25313687)
chr5 (44-98)||(6551289-6551343)
chr5 (199-364)||(37804225-37804389)
chr5 (44-97)||(21300043-21300096)
chr5 (18-83)||(21554276-21554341)
chr5 (162-258)||(30138199-30138296)
chr5 (18-78)||(21556922-21556982)
chr5 (199-261)||(18419289-18419351)
chr5 (162-227)||(31456721-31456787)
chr5 (44-97)||(20566546-20566599)
chr5 (201-298)||(24594218-24594314)
chr5 (3-112)||(26832608-26832715)
chr5 (45-82)||(36508633-36508670)
chr5 (325-381)||(263577-263633)
chr5 (49-97)||(7485002-7485050)
chr5 (55-127)||(19921609-19921680)
chr5 (201-257)||(24668312-24668368)
chr5 (201-257)||(24738081-24738137)
chr5 (201-257)||(24750850-24750906)
chr5 (44-75)||(18744896-18744927)
chr5 (203-261)||(21398956-21399014)
chr5 (44-110)||(21914491-21914556)
chr5 (44-97)||(31622117-31622170)
[»] chr3 (73 HSPs)
chr3 (20-381)||(16979629-16979989)
chr3 (45-381)||(22652490-22652825)
chr3 (199-379)||(26054587-26054766)
chr3 (199-379)||(5224044-5224222)
chr3 (199-379)||(15465815-15465994)
chr3 (199-381)||(42246-42427)
chr3 (18-95)||(36528869-36528946)
chr3 (160-260)||(45803451-45803552)
chr3 (199-381)||(16324693-16324874)
chr3 (199-381)||(54521481-54521662)
chr3 (160-258)||(13522463-13522561)
chr3 (125-261)||(48043557-48043694)
chr3 (199-380)||(13436958-13437138)
chr3 (199-368)||(12305794-12305962)
chr3 (3-97)||(24177694-24177788)
chr3 (125-261)||(25201972-25202107)
chr3 (18-91)||(3263936-3264009)
chr3 (5-82)||(15446828-15446905)
chr3 (44-120)||(33565064-33565140)
chr3 (160-259)||(48631170-48631270)
chr3 (44-130)||(13185862-13185948)
chr3 (48-120)||(11885560-11885632)
chr3 (44-120)||(35960927-35961003)
chr3 (31-130)||(11563692-11563791)
chr3 (199-298)||(55291754-55291852)
chr3 (161-261)||(3527270-3527372)
chr3 (3-65)||(37641462-37641524)
chr3 (199-261)||(43549808-43549870)
chr3 (44-97)||(40807996-40808049)
chr3 (44-97)||(44274418-44274471)
chr3 (45-97)||(17044966-17045018)
chr3 (45-97)||(17047126-17047178)
chr3 (45-97)||(17541434-17541486)
chr3 (45-97)||(22306583-22306635)
chr3 (199-333)||(3803580-3803713)
chr3 (199-266)||(46722739-46722806)
chr3 (44-82)||(5200242-5200280)
chr3 (44-98)||(15566743-15566797)
chr3 (44-82)||(16050942-16050980)
chr3 (31-97)||(17518859-17518925)
chr3 (31-97)||(17533721-17533787)
chr3 (46-120)||(18699431-18699505)
chr3 (44-82)||(19568207-19568245)
chr3 (46-120)||(22758835-22758909)
chr3 (199-257)||(29544186-29544244)
chr3 (44-82)||(40812848-40812886)
chr3 (44-130)||(42323970-42324056)
chr3 (31-97)||(49900730-49900796)
chr3 (45-118)||(11259411-11259483)
chr3 (18-78)||(14967203-14967263)
chr3 (199-258)||(6820010-6820069)
chr3 (199-257)||(10555148-10555206)
chr3 (199-257)||(18890265-18890323)
chr3 (19-65)||(52465345-52465391)
chr3 (18-112)||(52988831-52988923)
chr3 (48-97)||(14508847-14508896)
chr3 (162-257)||(6805043-6805139)
chr3 (49-97)||(10311527-10311575)
chr3 (45-97)||(17539106-17539158)
chr3 (49-120)||(17694045-17694115)
chr3 (126-173)||(21845732-21845778)
chr3 (162-227)||(3160742-3160808)
chr3 (44-82)||(9510915-9510953)
chr3 (44-82)||(9518890-9518928)
chr3 (44-82)||(10563723-10563761)
chr3 (46-120)||(43888756-43888830)
chr3 (199-261)||(43929228-43929290)
chr3 (45-131)||(49968859-49968944)
chr3 (44-97)||(12509349-12509402)
chr3 (45-82)||(15931508-15931545)
chr3 (45-82)||(41172371-41172408)
chr3 (160-227)||(12155141-12155209)
chr3 (45-97)||(35354602-35354654)
[»] chr4 (50 HSPs)
chr4 (18-381)||(40620249-40620611)
chr4 (45-381)||(10694245-10694580)
chr4 (3-381)||(15008685-15009057)
chr4 (45-381)||(10908011-10908346)
chr4 (199-381)||(28385962-28386143)
chr4 (199-381)||(49547096-49547277)
chr4 (18-82)||(14186973-14187037)
chr4 (199-368)||(33849474-33849642)
chr4 (125-261)||(35660724-35660862)
chr4 (44-120)||(9924131-9924207)
chr4 (160-254)||(9622330-9622425)
chr4 (199-368)||(15534853-15535021)
chr4 (160-261)||(16296707-16296809)
chr4 (44-142)||(21151-21249)
chr4 (44-130)||(9870443-9870529)
chr4 (18-112)||(10057648-10057740)
chr4 (44-110)||(11478652-11478718)
chr4 (44-142)||(21062596-21062694)
chr4 (199-368)||(36038542-36038710)
chr4 (44-97)||(15115222-15115275)
chr4 (232-368)||(9638739-9638874)
chr4 (45-97)||(11425943-11425995)
chr4 (162-261)||(19434775-19434875)
chr4 (45-97)||(25091653-25091705)
chr4 (45-97)||(53630474-53630526)
chr4 (44-82)||(19434558-19434596)
chr4 (45-82)||(35811376-35811413)
chr4 (45-97)||(10356436-10356488)
chr4 (162-261)||(14549486-14549586)
chr4 (44-120)||(37019648-37019723)
chr4 (199-258)||(15344775-15344834)
chr4 (44-119)||(15613069-15613143)
chr4 (44-119)||(51993540-51993614)
chr4 (44-82)||(2424386-2424424)
chr4 (44-82)||(14549775-14549813)
chr4 (199-257)||(16277440-16277498)
chr4 (199-261)||(18230578-18230640)
chr4 (30-120)||(19243577-19243666)
chr4 (199-257)||(53387050-53387108)
chr4 (49-97)||(6633541-6633589)
chr4 (162-261)||(18462859-18462959)
chr4 (45-97)||(19610324-19610376)
chr4 (45-97)||(42875797-42875849)
chr4 (199-258)||(12611751-12611810)
chr4 (49-120)||(15011474-15011545)
chr4 (44-82)||(14186067-14186105)
chr4 (162-227)||(14477502-14477568)
chr4 (45-82)||(16998540-16998577)
chr4 (44-112)||(27996778-27996844)
chr4 (49-97)||(46001535-46001583)
[»] scaffold0515 (1 HSPs)
scaffold0515 (3-381)||(4753-5123)
[»] scaffold0306 (1 HSPs)
scaffold0306 (3-381)||(4753-5123)
[»] scaffold0057 (2 HSPs)
scaffold0057 (3-333)||(69811-70140)
scaffold0057 (199-258)||(72277-72336)
[»] chr2 (57 HSPs)
chr2 (18-381)||(25183906-25184268)
chr2 (18-381)||(21080942-21081304)
chr2 (3-381)||(21915341-21915718)
chr2 (53-381)||(18357975-18358302)
chr2 (199-379)||(31345840-31346019)
chr2 (199-380)||(23338552-23338732)
chr2 (3-82)||(357896-357975)
chr2 (31-129)||(22501939-22502037)
chr2 (31-129)||(22509873-22509971)
chr2 (160-260)||(12626546-12626647)
chr2 (44-120)||(14694303-14694379)
chr2 (160-265)||(19647066-19647172)
chr2 (44-130)||(25142171-25142257)
chr2 (3-97)||(40912320-40912414)
chr2 (44-120)||(27852645-27852721)
chr2 (199-375)||(13100887-13101062)
chr2 (125-257)||(36734530-36734664)
chr2 (199-368)||(20261891-20262059)
chr2 (44-129)||(3539805-3539890)
chr2 (160-295)||(149620-149755)
chr2 (162-257)||(1383768-1383864)
chr2 (44-120)||(24516164-24516239)
chr2 (162-261)||(45535762-45535862)
chr2 (199-364)||(10684085-10684249)
chr2 (31-97)||(17307486-17307552)
chr2 (45-97)||(5031129-5031181)
chr2 (45-97)||(24780840-24780892)
chr2 (44-136)||(25046079-25046171)
chr2 (45-120)||(2523747-2523821)
chr2 (18-65)||(34858165-34858212)
chr2 (18-65)||(34873227-34873274)
chr2 (44-142)||(5986132-5986230)
chr2 (199-261)||(41301082-41301144)
chr2 (18-63)||(34491213-34491258)
chr2 (45-97)||(9975929-9975981)
chr2 (171-227)||(45535666-45535722)
chr2 (3-70)||(27484447-27484514)
chr2 (218-265)||(28345209-28345256)
chr2 (60-110)||(18390229-18390279)
chr2 (199-257)||(21072841-21072899)
chr2 (46-120)||(23068408-23068482)
chr2 (162-227)||(24884231-24884297)
chr2 (171-257)||(28652677-28652763)
chr2 (199-257)||(43707200-43707258)
chr2 (44-97)||(19201199-19201252)
chr2 (45-97)||(24436648-24436700)
chr2 (49-97)||(37270699-37270747)
chr2 (47-82)||(1383545-1383580)
chr2 (45-120)||(39683190-39683264)
chr2 (199-257)||(20590435-20590493)
chr2 (44-82)||(44072572-44072610)
chr2 (210-266)||(14183631-14183687)
chr2 (45-97)||(22251448-22251500)
chr2 (171-227)||(22501730-22501786)
chr2 (171-227)||(22509664-22509720)
chr2 (44-112)||(24792758-24792824)
chr2 (44-120)||(34401735-34401810)
[»] scaffold0083 (3 HSPs)
scaffold0083 (3-381)||(1654-2031)
scaffold0083 (44-82)||(5044-5082)
scaffold0083 (44-82)||(10754-10792)
[»] chr8 (58 HSPs)
chr8 (3-381)||(23478799-23479176)
chr8 (3-381)||(16198553-16198930)
chr8 (3-381)||(19880547-19880916)
chr8 (3-381)||(26454430-26454802)
chr8 (44-381)||(25657513-25657849)
chr8 (5-184)||(17158923-17159102)
chr8 (199-379)||(14397063-14397241)
chr8 (199-381)||(8413901-8414082)
chr8 (171-257)||(22483620-22483706)
chr8 (223-381)||(11775441-11775598)
chr8 (31-130)||(20022026-20022125)
chr8 (18-75)||(12577901-12577958)
chr8 (160-259)||(20879311-20879411)
chr8 (160-245)||(22610380-22610466)
chr8 (44-129)||(36727037-36727122)
chr8 (44-120)||(22254743-22254819)
chr8 (44-120)||(45469218-45469294)
chr8 (44-119)||(23899986-23900061)
chr8 (44-98)||(4380616-4380670)
chr8 (160-245)||(23884021-23884107)
chr8 (44-130)||(31722492-31722578)
chr8 (160-261)||(36732598-36732700)
chr8 (44-120)||(17906848-17906923)
chr8 (3-75)||(41680091-41680163)
chr8 (44-82)||(5761548-5761586)
chr8 (44-82)||(22532131-22532169)
chr8 (44-82)||(22536816-22536854)
chr8 (44-97)||(6101752-6101805)
chr8 (45-98)||(17218701-17218754)
chr8 (45-98)||(18761447-18761500)
chr8 (203-336)||(19882711-19882843)
chr8 (44-97)||(20397509-20397562)
chr8 (162-258)||(20517172-20517269)
chr8 (44-136)||(19700122-19700214)
chr8 (45-97)||(20083638-20083690)
chr8 (171-227)||(21676717-21676773)
chr8 (45-97)||(42817907-42817959)
chr8 (297-380)||(17795952-17796035)
chr8 (44-111)||(23419427-23419494)
chr8 (199-258)||(25483594-25483653)
chr8 (44-110)||(22317910-22317975)
chr8 (44-130)||(23948230-23948316)
chr8 (28-65)||(3273922-3273959)
chr8 (19-60)||(22237024-22237065)
chr8 (162-254)||(22344966-22345059)
chr8 (162-254)||(22356626-22356719)
chr8 (45-82)||(39936007-39936044)
chr8 (45-97)||(19140765-19140816)
chr8 (49-97)||(37292705-37292753)
chr8 (45-112)||(13660854-13660920)
chr8 (45-112)||(13719497-13719563)
chr8 (44-75)||(22610266-22610297)
chr8 (49-79)||(34758885-34758915)
chr8 (49-82)||(6573060-6573093)
chr8 (49-97)||(6202776-6202824)
chr8 (31-75)||(22208291-22208335)
chr8 (44-112)||(22583659-22583726)
chr8 (44-112)||(23889785-23889852)
[»] scaffold0138 (2 HSPs)
scaffold0138 (3-319)||(20876-21191)
scaffold0138 (3-381)||(33830-34206)
[»] chr6 (46 HSPs)
chr6 (3-381)||(15173411-15173788)
chr6 (3-355)||(15900612-15900963)
chr6 (105-355)||(15891629-15891878)
chr6 (199-379)||(23415625-23415804)
chr6 (203-379)||(27557383-27557558)
chr6 (199-381)||(23956581-23956762)
chr6 (160-313)||(29045049-29045202)
chr6 (18-120)||(27329954-27330055)
chr6 (18-120)||(27390694-27390795)
chr6 (199-368)||(28288659-28288827)
chr6 (44-120)||(18928658-18928734)
chr6 (44-130)||(15890711-15890796)
chr6 (44-151)||(31731903-31732009)
chr6 (160-245)||(1818804-1818890)
chr6 (199-368)||(12942861-12943029)
chr6 (3-112)||(27852193-27852300)
chr6 (45-97)||(7827972-7828024)
chr6 (44-112)||(12041619-12041687)
chr6 (45-97)||(23150287-23150339)
chr6 (45-120)||(19655231-19655305)
chr6 (46-97)||(24267849-24267900)
chr6 (297-380)||(25807852-25807935)
chr6 (45-112)||(27572122-27572188)
chr6 (199-257)||(13765188-13765246)
chr6 (44-98)||(15998888-15998942)
chr6 (46-120)||(19772667-19772741)
chr6 (18-64)||(28103421-28103467)
chr6 (199-257)||(31021874-31021932)
chr6 (45-130)||(19401062-19401146)
chr6 (44-129)||(23501641-23501725)
chr6 (45-97)||(18703568-18703620)
chr6 (45-97)||(18709503-18709555)
chr6 (232-379)||(19825674-19825820)
chr6 (199-255)||(23226010-23226066)
chr6 (162-227)||(18585549-18585615)
chr6 (48-82)||(18585820-18585854)
chr6 (3-65)||(20733202-20733264)
chr6 (46-120)||(22806716-22806790)
chr6 (44-82)||(28948590-28948628)
chr6 (45-82)||(27125477-27125514)
chr6 (199-258)||(20556185-20556244)
chr6 (45-120)||(26923659-26923733)
chr6 (175-261)||(10446048-10446134)
chr6 (46-120)||(15704565-15704639)
chr6 (49-79)||(29625201-29625231)
chr6 (44-76)||(30673401-30673433)
[»] scaffold0462 (3 HSPs)
scaffold0462 (3-380)||(10941-11317)
scaffold0462 (211-295)||(1073-1156)
scaffold0462 (211-295)||(6579-6662)
[»] chr7 (87 HSPs)
chr7 (3-381)||(16549963-16550337)
chr7 (3-381)||(16615325-16615699)
chr7 (44-381)||(32160199-32160535)
chr7 (18-333)||(29052155-29052462)
chr7 (199-379)||(1856553-1856731)
chr7 (199-379)||(13917725-13917904)
chr7 (199-379)||(25926452-25926631)
chr7 (160-306)||(13315195-13315341)
chr7 (160-313)||(19282831-19282984)
chr7 (199-368)||(16108011-16108179)
chr7 (44-130)||(35771440-35771526)
chr7 (162-258)||(14274062-14274159)
chr7 (44-151)||(4071767-4071873)
chr7 (44-131)||(14218894-14218981)
chr7 (44-151)||(15289052-15289158)
chr7 (162-295)||(12754781-12754914)
chr7 (31-97)||(13147458-13147524)
chr7 (44-110)||(48807324-48807390)
chr7 (199-379)||(11661826-11662005)
chr7 (31-120)||(12127149-12127237)
chr7 (199-379)||(14188446-14188625)
chr7 (18-130)||(30820124-30820234)
chr7 (199-298)||(14105580-14105678)
chr7 (199-298)||(14415597-14415695)
chr7 (199-261)||(4325933-4325995)
chr7 (44-110)||(12754611-12754676)
chr7 (3-65)||(19485931-19485993)
chr7 (199-364)||(23664275-23664439)
chr7 (45-110)||(16078317-16078382)
chr7 (44-97)||(20586352-20586405)
chr7 (45-97)||(8851159-8851211)
chr7 (45-97)||(12372274-12372326)
chr7 (45-97)||(12465260-12465312)
chr7 (46-118)||(14928290-14928362)
chr7 (46-118)||(15351756-15351828)
chr7 (43-130)||(11054681-11054767)
chr7 (218-364)||(29797286-29797431)
chr7 (218-364)||(29801105-29801250)
chr7 (44-98)||(4690662-4690716)
chr7 (199-364)||(11303923-11304087)
chr7 (199-265)||(13648115-13648181)
chr7 (44-130)||(15095636-15095721)
chr7 (199-261)||(44190369-44190431)
chr7 (45-97)||(11067468-11067520)
chr7 (45-97)||(12322930-12322982)
chr7 (46-118)||(14259373-14259445)
chr7 (45-97)||(20620286-20620338)
chr7 (45-97)||(32433589-32433641)
chr7 (171-245)||(36300766-36300841)
chr7 (44-130)||(13698637-13698723)
chr7 (199-257)||(16462910-16462968)
chr7 (44-98)||(18955329-18955383)
chr7 (160-261)||(38295438-38295540)
chr7 (162-255)||(42565948-42566042)
chr7 (31-97)||(44374843-44374909)
chr7 (31-97)||(44383708-44383774)
chr7 (18-60)||(46579732-46579774)
chr7 (44-82)||(47974819-47974857)
chr7 (44-97)||(14180397-14180450)
chr7 (199-256)||(17505117-17505174)
chr7 (199-256)||(17548040-17548097)
chr7 (218-295)||(19194995-19195071)
chr7 (44-97)||(20214147-20214200)
chr7 (44-97)||(24269946-24269999)
chr7 (45-82)||(33002168-33002205)
chr7 (5-130)||(36685106-36685229)
chr7 (44-97)||(46386087-46386140)
chr7 (49-97)||(10277327-10277375)
chr7 (159-261)||(18570481-18570584)
chr7 (162-261)||(47975007-47975107)
chr7 (44-75)||(8488093-8488124)
chr7 (44-75)||(8513752-8513783)
chr7 (199-266)||(13256525-13256592)
chr7 (44-75)||(16250221-16250252)
chr7 (46-120)||(32302203-32302278)
chr7 (44-82)||(10658850-10658888)
chr7 (44-130)||(15140181-15140266)
chr7 (45-79)||(16999454-16999488)
chr7 (44-98)||(18990846-18990900)
chr7 (203-257)||(25942312-25942366)
chr7 (199-261)||(39431340-39431402)
chr7 (45-75)||(43276744-43276774)
chr7 (45-82)||(18074647-18074684)
chr7 (44-97)||(36704570-36704623)
chr7 (31-75)||(58399-58443)
chr7 (160-243)||(8930881-8930965)
chr7 (31-75)||(19195633-19195677)
[»] scaffold0436 (1 HSPs)
scaffold0436 (18-381)||(8677-9039)
[»] scaffold0034 (2 HSPs)
scaffold0034 (3-336)||(29174-29506)
scaffold0034 (46-120)||(120931-121005)
[»] scaffold0046 (1 HSPs)
scaffold0046 (3-381)||(21735-22102)
[»] scaffold0058 (4 HSPs)
scaffold0058 (3-177)||(6288-6462)
scaffold0058 (270-381)||(6177-6288)
scaffold0058 (199-295)||(39965-40060)
scaffold0058 (162-227)||(59771-59837)
[»] scaffold0061 (2 HSPs)
scaffold0061 (126-355)||(14667-14895)
scaffold0061 (126-355)||(23725-23953)
[»] scaffold0200 (1 HSPs)
scaffold0200 (199-379)||(18314-18493)
[»] scaffold0051 (1 HSPs)
scaffold0051 (199-379)||(31864-32042)
[»] scaffold0117 (1 HSPs)
scaffold0117 (199-333)||(42438-42571)
[»] scaffold0293 (1 HSPs)
scaffold0293 (199-318)||(19452-19570)
[»] scaffold0001 (5 HSPs)
scaffold0001 (199-381)||(169158-169339)
scaffold0001 (199-381)||(176511-176692)
scaffold0001 (44-97)||(77687-77740)
scaffold0001 (45-97)||(31994-32046)
scaffold0001 (45-97)||(37301-37353)
[»] scaffold0113 (1 HSPs)
scaffold0113 (44-266)||(35323-35543)
[»] scaffold0439 (1 HSPs)
scaffold0439 (160-258)||(12080-12178)
[»] scaffold0035 (2 HSPs)
scaffold0035 (125-261)||(43866-44003)
scaffold0035 (125-261)||(39174-39311)
[»] scaffold0004 (4 HSPs)
scaffold0004 (160-306)||(66194-66338)
scaffold0004 (49-130)||(110141-110222)
scaffold0004 (44-78)||(328287-328321)
scaffold0004 (45-75)||(73109-73139)
[»] scaffold0802 (1 HSPs)
scaffold0802 (44-120)||(4708-4784)
[»] scaffold0453 (1 HSPs)
scaffold0453 (199-367)||(7163-7330)
[»] scaffold0422 (1 HSPs)
scaffold0422 (199-380)||(3683-3863)
[»] scaffold0026 (2 HSPs)
scaffold0026 (162-295)||(21925-22058)
scaffold0026 (44-97)||(146723-146776)
[»] scaffold0819 (1 HSPs)
scaffold0819 (3-112)||(5352-5460)
[»] scaffold0628 (1 HSPs)
scaffold0628 (31-120)||(1044-1133)
[»] scaffold0205 (2 HSPs)
scaffold0205 (125-261)||(5695-5832)
scaffold0205 (46-120)||(30631-30705)
[»] scaffold0086 (1 HSPs)
scaffold0086 (125-261)||(35565-35702)
[»] scaffold0071 (1 HSPs)
scaffold0071 (5-82)||(15287-15364)
[»] scaffold0220 (2 HSPs)
scaffold0220 (44-120)||(19931-20007)
scaffold0220 (290-367)||(13679-13756)
[»] scaffold0577 (1 HSPs)
scaffold0577 (18-129)||(9029-9138)
[»] scaffold0037 (2 HSPs)
scaffold0037 (44-130)||(112965-113052)
scaffold0037 (43-110)||(117805-117873)
[»] scaffold0632 (1 HSPs)
scaffold0632 (3-97)||(1165-1259)
[»] scaffold1941 (1 HSPs)
scaffold1941 (44-120)||(116-191)
[»] scaffold0555 (1 HSPs)
scaffold0555 (173-257)||(8925-9009)
[»] scaffold0139 (1 HSPs)
scaffold0139 (3-75)||(23556-23628)
[»] scaffold0203 (1 HSPs)
scaffold0203 (31-98)||(17926-17993)
[»] scaffold0156 (1 HSPs)
scaffold0156 (3-130)||(16572-16698)
[»] scaffold0589 (1 HSPs)
scaffold0589 (44-142)||(4340-4438)
[»] scaffold0411 (1 HSPs)
scaffold0411 (44-130)||(13416-13501)
[»] scaffold0075 (1 HSPs)
scaffold0075 (44-142)||(60850-60948)
[»] scaffold0031 (1 HSPs)
scaffold0031 (160-261)||(127459-127561)
[»] scaffold0008 (1 HSPs)
scaffold0008 (44-130)||(135503-135588)
[»] scaffold0217 (1 HSPs)
scaffold0217 (162-322)||(28491-28650)
[»] scaffold0104 (2 HSPs)
scaffold0104 (3-112)||(14942-15051)
scaffold0104 (3-112)||(16962-17071)
[»] scaffold1766 (1 HSPs)
scaffold1766 (44-120)||(695-770)
[»] scaffold1633 (1 HSPs)
scaffold1633 (45-97)||(1205-1257)
[»] scaffold1283 (1 HSPs)
scaffold1283 (45-97)||(468-520)
[»] scaffold0151 (2 HSPs)
scaffold0151 (199-295)||(9899-9994)
scaffold0151 (44-120)||(31086-31161)
[»] scaffold0077 (2 HSPs)
scaffold0077 (45-97)||(34339-34391)
scaffold0077 (44-119)||(5929-6003)
[»] scaffold0036 (1 HSPs)
scaffold0036 (45-97)||(78185-78237)
[»] scaffold0019 (2 HSPs)
scaffold0019 (45-97)||(24131-24183)
scaffold0019 (46-120)||(30048-30122)
[»] scaffold0064 (1 HSPs)
scaffold0064 (31-82)||(58761-58812)
[»] scaffold0043 (2 HSPs)
scaffold0043 (45-120)||(27954-28029)
scaffold0043 (45-120)||(42812-42887)
[»] scaffold0032 (1 HSPs)
scaffold0032 (31-98)||(61834-61901)
[»] scaffold1256 (1 HSPs)
scaffold1256 (44-98)||(2199-2253)
[»] scaffold0956 (2 HSPs)
scaffold0956 (199-261)||(2248-2310)
scaffold0956 (31-97)||(2555-2621)
[»] scaffold0594 (1 HSPs)
scaffold0594 (160-261)||(2076-2178)
[»] scaffold0364 (1 HSPs)
scaffold0364 (199-257)||(8005-8063)
[»] scaffold0213 (1 HSPs)
scaffold0213 (44-98)||(19206-19260)
[»] scaffold0207 (1 HSPs)
scaffold0207 (44-130)||(13391-13476)
[»] scaffold0175 (1 HSPs)
scaffold0175 (44-130)||(8610-8695)
[»] scaffold0056 (1 HSPs)
scaffold0056 (44-110)||(67108-67174)
[»] scaffold0021 (2 HSPs)
scaffold0021 (162-227)||(16977-17043)
scaffold0021 (162-227)||(26508-26574)
[»] scaffold0601 (1 HSPs)
scaffold0601 (45-82)||(196-233)
[»] scaffold0256 (1 HSPs)
scaffold0256 (43-112)||(1845-1913)
[»] scaffold0241 (1 HSPs)
scaffold0241 (44-97)||(3182-3235)
[»] scaffold0153 (2 HSPs)
scaffold0153 (20-65)||(5329-5374)
scaffold0153 (20-65)||(12349-12394)
[»] scaffold0149 (3 HSPs)
scaffold0149 (44-97)||(29572-29625)
scaffold0149 (171-261)||(21376-21466)
scaffold0149 (44-82)||(21626-21664)
[»] scaffold0111 (2 HSPs)
scaffold0111 (48-97)||(5383-5432)
scaffold0111 (46-97)||(12534-12585)
[»] scaffold0020 (2 HSPs)
scaffold0020 (44-97)||(168998-169051)
scaffold0020 (45-97)||(143611-143663)
[»] scaffold1939 (1 HSPs)
scaffold1939 (160-223)||(1-65)
[»] scaffold0737 (1 HSPs)
scaffold0737 (45-97)||(4714-4766)
[»] scaffold0671 (1 HSPs)
scaffold0671 (44-136)||(4901-4993)
[»] scaffold0251 (1 HSPs)
scaffold0251 (44-120)||(20085-20160)
[»] scaffold0123 (1 HSPs)
scaffold0123 (44-120)||(7254-7330)
[»] scaffold0047 (1 HSPs)
scaffold0047 (45-97)||(79049-79101)
[»] scaffold0002 (1 HSPs)
scaffold0002 (44-136)||(398523-398615)
[»] scaffold1276 (1 HSPs)
scaffold1276 (199-266)||(972-1039)
[»] scaffold0292 (1 HSPs)
scaffold0292 (46-117)||(7535-7606)
[»] scaffold0041 (1 HSPs)
scaffold0041 (50-97)||(5712-5759)
[»] scaffold0676 (1 HSPs)
scaffold0676 (160-261)||(2650-2752)
[»] scaffold0516 (1 HSPs)
scaffold0516 (44-82)||(5304-5342)
[»] scaffold0334 (2 HSPs)
scaffold0334 (44-82)||(533-571)
scaffold0334 (199-261)||(1962-2024)
[»] scaffold0254 (1 HSPs)
scaffold0254 (30-120)||(21625-21714)
[»] scaffold0230 (2 HSPs)
scaffold0230 (48-82)||(6688-6722)
scaffold0230 (162-227)||(6910-6976)
[»] scaffold0148 (1 HSPs)
scaffold0148 (160-261)||(8677-8779)
[»] scaffold0070 (1 HSPs)
scaffold0070 (199-257)||(8932-8990)
[»] scaffold0065 (1 HSPs)
scaffold0065 (44-142)||(52543-52641)
[»] scaffold0042 (1 HSPs)
scaffold0042 (44-130)||(29355-29441)
[»] scaffold0040 (2 HSPs)
scaffold0040 (44-82)||(106050-106088)
scaffold0040 (44-120)||(13032-13107)
[»] scaffold0018 (1 HSPs)
scaffold0018 (46-120)||(21672-21746)
[»] scaffold0003 (1 HSPs)
scaffold0003 (44-142)||(96354-96451)
[»] scaffold0686 (1 HSPs)
scaffold0686 (3-60)||(1475-1532)
[»] scaffold0407 (1 HSPs)
scaffold0407 (45-82)||(11274-11311)
[»] scaffold0174 (1 HSPs)
scaffold0174 (3-112)||(13624-13731)
[»] scaffold0007 (1 HSPs)
scaffold0007 (162-258)||(18976-19073)
[»] scaffold0028 (1 HSPs)
scaffold0028 (46-130)||(3053-3136)
[»] scaffold1439 (1 HSPs)
scaffold1439 (199-258)||(916-975)
[»] scaffold0106 (1 HSPs)
scaffold0106 (203-266)||(21816-21879)
[»] scaffold0092 (1 HSPs)
scaffold0092 (162-300)||(38558-38695)
[»] scaffold0080 (1 HSPs)
scaffold0080 (45-120)||(21793-21867)
[»] scaffold0625 (1 HSPs)
scaffold0625 (44-98)||(5860-5914)
[»] scaffold0285 (1 HSPs)
scaffold0285 (44-82)||(19768-19806)
[»] scaffold0096 (1 HSPs)
scaffold0096 (54-120)||(22075-22141)
[»] scaffold0016 (1 HSPs)
scaffold0016 (199-261)||(174261-174323)
[»] scaffold0010 (1 HSPs)
scaffold0010 (44-82)||(126304-126341)
[»] scaffold0848 (1 HSPs)
scaffold0848 (45-130)||(2021-2105)
[»] scaffold0112 (1 HSPs)
scaffold0112 (44-97)||(2889-2942)
[»] scaffold0452 (1 HSPs)
scaffold0452 (72-120)||(12649-12697)
[»] scaffold0379 (1 HSPs)
scaffold0379 (44-112)||(3892-3959)
[»] scaffold0328 (1 HSPs)
scaffold0328 (31-75)||(18626-18670)
[»] scaffold0029 (1 HSPs)
scaffold0029 (44-120)||(12164-12239)
[»] scaffold0011 (1 HSPs)
scaffold0011 (48-112)||(126776-126840)


Alignment Details
Target: chr1 (Bit Score: 279; Significance: 1e-156; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 7 - 381
Target Start/End: Complemental strand, 50001566 - 50001193
Alignment:
Q  7 gagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaattt 106  Q
    ||||| |||| ||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||    
T  50001566 gagaatcaaaagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaaactggattt 50001467  T
Q  107 aacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaatt 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  50001466 aacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaatt 50001367  T
Q  207 gaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttc 306  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||| |||| |||||    
T  50001366 gaagttcaggctgtagaataaacatatgttgagtttcctatcaaattttggattt-gggttgatgaaattggggcttttggagtgaaaactggtatgttc 50001268  T
Q  307 cggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    | |||||||||||| | ||||||||||||||| ||||||||||||||||  |||||||||||||||||| |||||    
T  50001267 ccgtagatttgtctgtcgcaactcgccacaacgagtaaacttactcgcctcgcgagctgcactttgacaacatcc 50001193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 381
Target Start/End: Original strand, 29763605 - 29763967
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  29763605 gggagagagaccgacgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgta 29763704  T
Q  118 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| || |    
T  29763705 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatacaatgaattaacataagaattgaagtttagac 29763804  T
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttg 317  Q
    ||||||||||||| | |||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  29763805 tgtagaataaacataagttgagtttcctatcaaatttgggattt-gggtggatgaaattggggcttttggagtgaaaactggtctgttcccgtagatttg 29763903  T
Q  318 tctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||  | ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  29763904 tccgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 29763967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 3 - 333
Target Start/End: Original strand, 46197703 - 46198032
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  46197703 agaggagaaccaagagggagagagactgtcgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgg 46197802  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  46197803 atttaacatgatttaggtggtaattttgatgattagagaaattatgttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataag 46197902  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| |    
T  46197903 aattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtat 46198001  T
Q  303 gttccggtagatttgtctatagcaactcgcc 333  Q
    ||||| |||||||||||  | ||||||||||    
T  46198002 gttcccgtagatttgtccgtcgcaactcgcc 46198032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 160 - 313
Target Start/End: Original strand, 17901916 - 17902070
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||| ||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| |||||| |||||||||||||||    
T  17901916 aattgattgttgaaagagtagataatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttggga 17902015  T
Q  259 tttaggtttgatgaaattggggc-ttttggagtgaaaattggtctgttccggtaga 313  Q
    ||| || |||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  17902016 ttt-gggttgatgaaattggggctttttggagtgaaaactggtctgttcccgtaga 17902070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 199 - 380
Target Start/End: Complemental strand, 297255 - 297075
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||| ||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  297255 taagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 297158  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatc 380  Q
    |||||||||| ||||| ||||   | ||||||||||||| | ||||||||||||||||  |||| ||||||  ||||||||||    
T  297157 ggtctgttcccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgatctgcacagtgacagcatc 297075  T

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Target: chr1; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 3 - 82
Target Start/End: Original strand, 12327701 - 12327780
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  12327701 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgagactaactttctctaattctaagt 12327780  T

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Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 51336558 - 51336494
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  51336558 gggagggagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 51336494  T

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Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 210 - 313
Target Start/End: Complemental strand, 6834053 - 6833951
Alignment:
Q  210 gttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccgg 309  Q
    ||||||| |||||||||| || |||| |||||| |||||||||||||||||| || ||||||||||||||||||||| ||||||||   ||||||||| |    
T  6834053 gttcaggttgtagaataatcataggtagagttttctatcaaatttgggattttgg-ttgatgaaattggggcttttgtagtgaaaaccagtctgttcccg 6833955  T
Q  310 taga 313  Q
    ||||    
T  6833954 taga 6833951  T

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Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 13302955 - 13302869
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | ||||||| ||| |||||    
T  13302955 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttg 13302869  T

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Target: chr1; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 34392704 - 34392601
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggct-gtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  | |||||||||||| |||||||||||||| |  ||||||||    
T  34392704 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagaattgtagaataaacataggttgagtttccttttgaatttggg 34392605  T
Q  258 attt 261  Q
    ||||    
T  34392604 attt 34392601  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 4595852 - 4595938
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||| |||||||||||||||||||||||   | ||||||||||||  |||||||||| | ||||||| ||| |||||    
T  4595852 ctaaggtaagggtgagactaactttctctaattctaagaggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttg 4595938  T

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Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 8306542 - 8306440
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||||||  ||||||||  ||| |||||  ||||||  ||| |||||| || ||||| |||||||||||||||||||||    
T  8306542 aattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttggga 8306443  T
Q  259 ttt 261  Q
    |||    
T  8306442 ttt 8306440  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 24723350 - 24723415
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||| |||||||||||||||    
T  24723350 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctg-aaactgaatttaaca 24723415  T

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Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 42697837 - 42697739
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 142  Q
    |||||||||||||| ||||||| |||| |||||||||||  | ||||||||| || || |||||||||| ||||||| ||| |||||| |||| |||||    
T  42697837 ctaaggtaagggtgagactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggttgtagttttgaggatttgagaa 42697739  T

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Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 290 - 379
Target Start/End: Original strand, 8276234 - 8276323
Alignment:
Q  290 tgaaaattggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    |||||| ||||||||||| ||||| |||||| | ||||||||||||||  | ||||||||||||||  |||||||||||  |||||||||    
T  8276234 tgaaaactggtctgttcccgtagagttgtctctcgcaactcgccacaatgattaaacttactcgcctcgcgagctgcacaatgacagcat 8276323  T

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Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 24007183 - 24007252
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctct 72  Q
    ||||||||| |||  ||||||||||| | |||||||| ||||||||||||||||||||||| ||||||||    
T  24007183 agaggagaaccaagagggagagagaccgtcgatcatctatactaaggtaagggtgggactagctttctct 24007252  T

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Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 19676763 - 19676711
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  19676763 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 19676711  T

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Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 21046049 - 21046101
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  21046049 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 21046101  T

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Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 261
Target Start/End: Original strand, 21188149 - 21188249
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||| |||||||||||| |||||||| |||| |||||| ||||||| ||||||||||  | | ||   ||||||||||||||||||||||    
T  21188149 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataagaatatgtaatgtttcctatcaaatttgggatt 21188248  T
Q  261 t 261  Q
    |    
T  21188249 t 21188249  T

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Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 7051921 - 7051959
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  7051921 ctaaggtaagggtgggactaactttctctaattctaagt 7051959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 16058300 - 16058366
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |  ||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  16058300 ccgatcatctaatctaaggtaagggtgggactaaatttctctaattctaagttgtataattctgaaa 16058366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 21995622 - 21995684
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaac 65  Q
    ||||||||| |||  ||||||||||| |||||||||| |||||||| ||||||||||||||||    
T  21995622 agaggagaaccaagagggagagagaccgccgatcatcaatactaagataagggtgggactaac 21995684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 22130178 - 22130240
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||| ||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  22130178 taagaattgatgttaaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 22130240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 44822246 - 44822312
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| ||||||||||    
T  44822246 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataa 44822312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 45574172 - 45574230
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  45574172 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 45574230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 28313151 - 28313082
Alignment:
Q  297 tggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgc 366  Q
    ||||||||||| ||||| |||||| | ||||||||||||| | ||||||||||||||||  |||||||||    
T  28313151 tggtctgttcccgtagagttgtctgttgcaactcgccacagcgagtaaacttactcgcctcgcgagctgc 28313082  T

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Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 42913102 - 42913049
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  42913102 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 42913049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 261
Target Start/End: Original strand, 7052129 - 7052229
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| |||| ||||| || ||||| |||||||||||| ||||||||||    
T  7052129 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtaaaataatcataggttaagtttcctatcatatttgggatt 7052228  T
Q  261 t 261  Q
    |    
T  7052229 t 7052229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 266
Target Start/End: Original strand, 21239048 - 21239264
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 143  Q
    |||||||| ||||||||||||||||||||||||||||||  | | ||||||||| ||| |||||||| |  |||||| ||| ||||       ||| |||    
T  21239048 ctaaggtatgggtgggactaactttctctaattctaagttgtatgattctgaaa-ctggatttaacaggtggtaggttgtagtttt-------aga-aaa 21239138  T
Q  144 ttaggttttggtt--tggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagt 240  Q
    ||||||||| |    |  ||||||||||| ||||||||||||||||  |||| |||  ||| |||||  ||||||  |||||||||| || |||| ||||    
T  21239139 ttaggtttttgaaactaaaattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcagtttgtagaataatcataggtagagt 21239238  T
Q  241 ttcctatcaaatttgggatttaggtt 266  Q
    || ||||||||||| |||||| ||||    
T  21239239 tttctatcaaatttaggatttgggtt 21239264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 189 - 261
Target Start/End: Original strand, 24723604 - 24723676
Alignment:
Q  189 tgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    ||||||||  ||| |||||  ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  24723604 tgaattaaggtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 24723676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 21708201 - 21708127
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||||||||||| |||  ||||||| ||| || |||||||||||| || |||||||||| |||||||    
T  21708201 taaggtaagggtgggactaaccttcaataattctgagt-atgtaattctgaaaattggatttaacatgttgtaggt 21708127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 21712744 - 21712670
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||||||||||| |||  ||||||| ||| || |||||||||||| || |||||||||| |||||||    
T  21712744 taaggtaagggtgggactaaccttcaataattctgagt-atgtaattctgaaaattggatttaacatgttgtaggt 21712670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 256
Target Start/End: Original strand, 23194667 - 23194722
Alignment:
Q  201 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 256  Q
    |||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||    
T  23194667 agaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgg 23194722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 45755573 - 45755486
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttga 131  Q
    |||||||||||||| ||||||| |||| ||||| ||||| || | |||||||||| || |||||||| | ||||||| ||| ||||||    
T  45755573 ctaaggtaagggtgagactaaccttctttaattataagttatatgattctgaaaagtggatttaacaagttgtaggttgtagttttga 45755486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 22350769 - 22350684
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||| |||  ||||||| ||| || | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  22350769 ctaaggtaagggtgggactaaccttcaataattctgagt-atatgattctgaaaattgaatttaacaagttgtaggttgtagttttg 22350684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 41373437 - 41373348
Alignment:
Q  30 gccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||| ||| |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  41373437 gccgatcattcattctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 41373348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 20633631 - 20633683
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||| |||||||||||||||||| ||||||||||||||  | |||||||||||    
T  20633631 taagataagggtgggactaacttgctctaattctaagttgtataattctgaaa 20633683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 28313248 - 28313192
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttg 255  Q
    |||||||||| ||||||| ||| |||||| || ||||| ||||||||||||||||||    
T  28313248 taagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttg 28313192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 295
Target Start/End: Complemental strand, 35894063 - 35894013
Alignment:
Q  244 ctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaa 295  Q
    |||| ||||||||||||| |||| |||||||||| |||||||||||||||||    
T  35894063 ctataaaatttgggatttgggtt-gatgaaattgaggcttttggagtgaaaa 35894013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 7320593 - 7320658
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    |||||||||||||||||||||| | | ||||||||||||  | | |||||||||| |||||||||||    
T  7320593 ctaaggtaagggtgggactaacctacactaattctaagt-gtattattctgaaaattgaatttaaca 7320658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 22145666 - 22145696
Alignment:
Q  45 taaggtaagggtgggactaactttctctaat 75  Q
    |||||||||||||||||||||||||||||||    
T  22145666 taaggtaagggtgggactaactttctctaat 22145696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 51324557 - 51324519
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  51324557 ctaaggtaagggtgagactaactttccctaattctaagt 51324519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 81
Target Start/End: Complemental strand, 24727420 - 24727383
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaag 81  Q
    |||||||||||||||||||||| |||| ||||||||||    
T  24727420 ctaaggtaagggtgggactaaccttctttaattctaag 24727383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 48444444 - 48444369
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  48444444 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 48444369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 275; Significance: 1e-154; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 19 - 381
Target Start/End: Complemental strand, 17011806 - 17011445
Alignment:
Q  19 ggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 118  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  17011806 ggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtag 17011707  T
Q  119 gtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggct 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  17011706 gtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggct 17011607  T
Q  219 gtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgt 318  Q
    |||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||| ||||||||||| ||||||||||    
T  17011606 gtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggctttaggagtgaaaactggtctgttcccgtagatttgt 17011508  T
Q  319 ctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |  | |||| |||||||  | ||||||||||||||||  ||||||||||||||||||||||||    
T  17011507 ccgtcgcaagtcgccaccgcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 17011445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 29448934 - 29448557
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||||||||  ||||||||| |||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||     
T  29448934 agaggagaaccaagagggagagagaccaccgatcatcaatactaaggtaatgatgagactaactttctctaattctaagtaatttaattctgaaaactgg 29448835  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  29448834 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaaaccaatgaattaacataag 29448735  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||| ||||||    
T  29448734 aattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgagattt-gagttgatgaaattggggcttttggagtgaaaactggtct 29448636  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||| |||||||||||  | ||||||||| ||| | ||||||| ||||||||  |||||||||||||||||| |||||    
T  29448635 gttcccgtagatttgtccgtcgcaactcgctacagcgagtaaacctactcgcctcgcgagctgcactttgacaacatcc 29448557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 45 - 319
Target Start/End: Complemental strand, 266090 - 265817
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaat 144  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  266090 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtggtaattttgatgattagagaaat 265991  T
Q  145 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 244  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  265990 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 265891  T
Q  245 tatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtc 319  Q
    ||||||||||||||||| || |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  265890 tatcaaatttgggattt-ggattgatgaaattggggcttttcgagtgaaaactggtctgttcccgtagatttgtc 265817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 199 - 381
Target Start/End: Original strand, 33472716 - 33472897
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||||||| |||  |||||||  | ||| ||||||  || ||| |    
T  33472716 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatttgggtg-gatgaaaaattgggtttttggc-tggaaact 33472813  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||| ||||| |||||| | ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  33472814 ggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 33472897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 199 - 380
Target Start/End: Original strand, 27868727 - 27868907
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| |    
T  27868727 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaact 27868824  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatc 380  Q
    |||||||||| ||||| |||||| | ||||||||||||| | ||||||||||||||||  |||||||||||  ||||||||||    
T  27868825 ggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcacagtgacagcatc 27868907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 3 - 112
Target Start/End: Original strand, 10774622 - 10774730
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| |||    
T  10774622 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattga 10774720  T
Q  103 atttaacatg 112  Q
    ||||||||||    
T  10774721 atttaacatg 10774730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 199 - 381
Target Start/End: Original strand, 41875745 - 41875926
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    ||||||| || |||||| ||||||||||| || ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| |    
T  41875745 taagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaact 41875842  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||  |||||| |||||  ||||| | ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  41875843 ggcatgttcccgtagagctgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 41875926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 21504065 - 21503975
Alignment:
Q  171 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    ||||||||||| ||||| |||||||||||||||| ||| ||||||| |||||||||| || ||||||||||||||||  ||||||||||||    
T  21504065 aaagagtaggtgatccaatgaattaacataagaactgatgttcaggttgtagaataatcataggttgagtttcctattgaatttgggattt 21503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 20469175 - 20469261
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| |||||||| || |||||||| | ||||||| ||| |||||    
T  20469175 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttg 20469261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 21617927 - 21618013
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| ||| |||| ||||||||||| | ||||||| ||| |||||    
T  21617927 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctaaaaattgaatttaacaagttgtaggttgtagttttg 21618013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 31457052 - 31456975
Alignment:
Q  5 aggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||| |||  ||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||| |||||    
T  31457052 aggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgagactaactttctctaattttaagt 31456975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 30616708 - 30616629
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||| |||  ||||||||||| |||||||||| ||| || ||||||||||||||| |||||||||||||||||||    
T  30616708 agaggagaaccaagagggagagagaccgccgatcatcaatattatggtaagggtgggactgactttctctaattctaagt 30616629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 368
Target Start/End: Complemental strand, 9777005 - 9776837
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| ||||| |||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  9777005 taagaatcgatgttcagattgtagaataaacataggttaagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 9776908  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    |||||||||| ||||  ||||   | ||||||||||||| | ||||||||||||||||  |||||||||||    
T  9776907 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcac 9776837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 20313248 - 20313111
Alignment:
Q  125 attttgatgattagagaaattaggttttggtttggaattgattg-ttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 223  Q
    ||||||||||||||||||||||| ||||| |||||||||||||| | ||| |||||  ||| || |||||||   ||  |||||| ||||| | | ||||    
T  20313248 attttgatgattagagaaattagattttgatttggaattgattgctaaaaaagtagagaattcaatgaattagtgtacaaattgatgttcaagttataga 20313149  T
Q  224 ataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    ||||||| || |||||||||||||  ||||||||||||    
T  20313148 ataaacatagattgagtttcctattgaatttgggattt 20313111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 265
Target Start/End: Original strand, 36508859 - 36508963
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||| ||| |||||||||| || ||||| |||||||||||||||||||||||    
T  36508859 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgtttaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 36508958  T
Q  261 taggt 265  Q
    |||||    
T  36508959 taggt 36508963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 17875993 - 17875896
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| ||||||||||  | ||||   ||||| ||||||||||||||    
T  17875993 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataacaataggtgatgtttcttatcaaatttggga 17875896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 25249827 - 25249903
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||| |||||||| |||| ||||| ||||| || |||||||||||| || |||||||||| |||||||    
T  25249827 ctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggt 25249903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 25313611 - 25313687
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||| |||||||| |||| ||||| ||||| || |||||||||||| || |||||||||| |||||||    
T  25313611 ctaaggtaagggtaggactaaccttctttaattttaagttatataattctgaaaattggatttaacatgttgtaggt 25313687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 6551289 - 6551343
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  6551289 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa 6551343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 37804225 - 37804389
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| | |||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  37804225 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 37804322  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagct 364  Q
    |||||||||| ||||  ||||   | ||||||||||||| | ||||||| ||||||||  |||||||    
T  37804323 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacgtactcgcctcgcgagct 37804389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 21300043 - 21300096
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||| |||||  | |||||||||||    
T  21300043 ctaaggtaagggtgggactaactttctctaattttaagttgtataattctgaaa 21300096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 21554276 - 21554341
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagta 83  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||||| |||  ||||||| ||||    
T  21554276 gggagagagaccgctgatcatcaatactaaggtaagggtgggactaaccttcagtaattctgagta 21554341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 30138199 - 30138296
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||| |||| ||||| |||||| |||||||||||| ||  ||| ||||||| |||||||||| || ||||| ||||||| | |||||||||||    
T  30138199 ttgattgttgaaagtgtaggcaatccaatgaattaacatatgatatgatgttcaggttgtagaataatcataggttaagtttccaaacaaatttggga 30138296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 78
Target Start/End: Original strand, 21556922 - 21556982
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattct 78  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||||||| |||  |||||||    
T  21556922 gggagagagaccgccgatcatcaatactaaggtaagggtgagactaaccttcagtaattct 21556982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 18419351 - 18419289
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||||||| |||||||||| || || || |||||||||||||||||| |||||    
T  18419351 taagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttgagattt 18419289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 31456787 - 31456721
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| |||| ||||||||| || |||||||||||| ||||||| ||||||| ||||||||||    
T  31456787 ttgattgttgaaagtgtaggtaattcaatgaattaacatatgaattgatgttcaggttgtagaataa 31456721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 20566599 - 20566546
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||| ||||||||||||||||||| ||||  | |||||||||||    
T  20566599 ctaaggtaagggtgagactaactttctctaattcaaagttgtataattctgaaa 20566546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 298
Target Start/End: Original strand, 24594218 - 24594314
Alignment:
Q  201 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||| |||||||  ||||||||| || ||||| |||||||||||||||||||| ||| || | ||||||||| ||  |||| | ||||||||||    
T  24594218 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggggttt-gggtagatgaaatttggtttttttgggtgaaaattg 24594314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 26832715 - 26832608
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| || || |||| |||||| ||||||||||||| |||| |||  ||||||||||| || | |||||||| | |||    
T  26832715 agaggagaaccaagagggagagagaccgctgaccatcaatactacggtaagggtgggagtaaccttcaataattctaagt-atgtgattctgaaga-tga 26832618  T
Q  103 atttaacatg 112  Q
    ||||||||||    
T  26832617 atttaacatg 26832608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 36508633 - 36508670
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  36508633 taaggtaagggtgagactaactttctctaattctaagt 36508670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 263633 - 263577
Alignment:
Q  325 caactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||||||  |||||||||||||||   |||||||||||||||||| |||||    
T  263633 caactcgccacaaggagtaaacttactcgcttcgcgagctgcactttgacatcatcc 263577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 7485050 - 7485002
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  7485050 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 7485002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 19921680 - 19921609
Alignment:
Q  55 gtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatt 127  Q
    ||||||||| ||||||||||||||||||  | |||||||| ||| ||| ||||||||| ||||||| ||||||    
T  19921680 gtgggactacctttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtaatt 19921609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 24668312 - 24668368
Alignment:
Q  201 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24668312 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24668368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 24738081 - 24738137
Alignment:
Q  201 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24738081 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24738137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 24750850 - 24750906
Alignment:
Q  201 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  24750850 agaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 24750906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 75
Target Start/End: Complemental strand, 18744927 - 18744896
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||||||||||||||||||||||||||    
T  18744927 ctaaggtaagggtgggactaactttctctaat 18744896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 261
Target Start/End: Original strand, 21398956 - 21399014
Alignment:
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||| ||||||| ||||||||||||| |||  |||||| |||| |||||||||||||    
T  21398956 aattgatgttcaggttgtagaataaacataggaagagttttctataaaatttgggattt 21399014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 21914491 - 21914556
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    |||||||||||||||||||||| |||  ||||||| ||| || |||||||||||| || ||||||||    
T  21914491 ctaaggtaagggtgggactaaccttcaataattctgagt-atgtaattctgaaaattggatttaaca 21914556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 31622170 - 31622117
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||| ||||||||||||||| || ||  | |||||||||||    
T  31622170 ctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 31622117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 73)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 20 - 381
Target Start/End: Complemental strand, 16979989 - 16979629
Alignment:
Q  20 gagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 119  Q
    ||||||||| | |||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||    
T  16979989 gagagagaccgtcgatcatcaatactaaggtaagggtgggactaactttctttaattctaagtattttaattctgaaaactggatttaacatgatgtagg 16979890  T
Q  120 tggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  16979889 tggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggctg 16979790  T
Q  220 tagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtc 319  Q
    ||||||||||| ||||||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  16979789 tagaataaacataggttgagtttcctatcaaatttggaattt-gggttgatgaaattggggcttttggagtgaaaactggtctgttcccgtagatttgtc 16979691  T
Q  320 tatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    | | | ||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  16979690 tgtcgtaactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 16979629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 45 - 381
Target Start/End: Complemental strand, 22652825 - 22652490
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaat 144  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||||    
T  22652825 taaggtaagagtgggactaactttctctaattctaagtaatttaattctgaaaactagatttaacatgatgtaggtcgcaattttgatgattagagaaat 22652726  T
Q  145 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 244  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22652725 taggttttggtttggaattgattgttaaagagtaggtaatctagtgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 22652626  T
Q  245 tatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatagcaactcgccacaacaagtaa 344  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||||| |||||||||||  | ||||||||||||| | ||||     
T  22652625 tatcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactagtctgttcccgtagatttgtccgttgcaactcgccacagcgagtac 22652527  T
Q  345 acttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||||  ||||||| ||||||||||||||||    
T  22652526 acttactcgcctcgcgagctacactttgacagcatcc 22652490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 199 - 379
Target Start/End: Original strand, 26054587 - 26054766
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||    
T  26054587 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatttgggtt-gatgaaattggggcttttggagtgaaaactg 26054685  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    ||||||||  |||||||||||  | ||||||||||||| |||||| |||||||||||  ||||||||||||||||||||||    
T  26054686 gtctgttctcgtagatttgtccgtcgcaactcgccacagcaagtacacttactcgcctcgcgagctgcactttgacagcat 26054766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 199 - 379
Target Start/End: Complemental strand, 5224222 - 5224044
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |     
T  5224222 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattgggg-ttttggagtgaaaacta 5224125  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    || |||||| |||||||||||| | ||||||||||||| | |||| |||||||||||  | ||||||||||||||||||||    
T  5224124 gtttgttcccgtagatttgtctgtcgcaactcgccacagcgagtacacttactcgcctcgtgagctgcactttgacagcat 5224044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 199 - 379
Target Start/End: Complemental strand, 15465994 - 15465815
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||| ||    
T  15465994 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatatgggattt-gggttgatgaaattggggcttttagagtgaaaactg 15465896  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    ||||||||  |||||||||||  | ||||| | ||||| | |||| |||||||||||  ||||||| ||||||||||||||    
T  15465895 gtctgttctcgtagatttgtccgtcgcaacccaccacagcgagtacacttactcgcctcgcgagcttcactttgacagcat 15465815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 199 - 381
Target Start/End: Complemental strand, 42427 - 42246
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| |    
T  42427 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaact 42330  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||| ||||| |||||| | | ||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  42329 ggtctgttcccgtagagttgtctgtcgaaactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 42246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 36528946 - 36528869
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctga 95  Q
    ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  36528946 gggagagagaccgccgatcatcaatactaaggtaagggtgggattaactttctctaattctaagtaatataattctga 36528869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 45803451 - 45803552
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||||||  |||||||||||||||||||| || |||| ||||||||||||| ||||||||||||||||  |||||||||    
T  45803451 aattgattgttgaaagagtaggtaatccgatgaattaacataagaattgatgtccaggttgtagaataaacataggttgagtttcctattgaatttggga 45803550  T
Q  259 tt 260  Q
    ||    
T  45803551 tt 45803552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 381
Target Start/End: Original strand, 16324693 - 16324874
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    |||||||||| ||||||| ||||||||||  | || || |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| |    
T  16324693 taagaattgatgttcaggttgtagaataattatagcttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaact 16324790  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||| ||||| |||||| | ||||||||||||| | ||||||||||||||||  ||||||| ||||||||||||||||    
T  16324791 ggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctacactttgacagcatcc 16324874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 381
Target Start/End: Complemental strand, 54521662 - 54521481
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||| | |||||||||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  |||||| |    
T  54521662 taagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tgaaaact 54521565  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||| | ||||| ||||   | ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  54521564 ggtctgtttccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 54521481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 258
Target Start/End: Original strand, 13522463 - 13522561
Alignment:
Q  160 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  13522463 aattgatcgttaaagagtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 13522561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 48043557 - 48043694
Alignment:
Q  125 attttgatgattagagaaattaggttttggtttggaattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 223  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| | |||| |||| || |||||||   ||  | |||| ||||| | ||||||    
T  48043557 attttgatgattagagaaattagattttgatttggaattgattgttaaaaaggtagataattcaatgaattagtgtacaatttgatgttcaagttgtaga 48043656  T
Q  224 ataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  48043657 ataaacataggttgagtttcctattgaatttgggattt 48043694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 380
Target Start/End: Complemental strand, 13437138 - 13436958
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||| ||||||||||||| |||||||||||||||||||||||||| ||| || |  ||| ||| | ||| ||||||  |||||| |    
T  13437138 taagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtgaatgaaaaattgggtttttgg-ctgaaaact 13437041  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatc 380  Q
    ||||||||||  |||| ||||   | ||||||||||||| | ||||||||||||||||  |||||||||||  ||||||||||    
T  13437040 ggtctgttcccatagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcacagtgacagcatc 13436958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 199 - 368
Target Start/End: Complemental strand, 12305962 - 12305794
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  12305962 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 12305865  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    |||||||||| ||||  ||||   | ||||||||||||| | ||||||||||||||||  |||||||||||    
T  12305864 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcac 12305794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 3 - 97
Target Start/End: Original strand, 24177694 - 24177788
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |||  ||||||||||| |||||| ||| ||||||||||||||||||||| |||||||||||||| |||||  | |||||||||||    
T  24177694 agaggagaaccaagagggagagagaccgccgattatcaatactaaggtaagggtgggacaaactttctctaattataagttgtataattctgaaa 24177788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 25202107 - 25201972
Alignment:
Q  125 attttgatgattagagaaattaggttttggtttggaattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 223  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||| || |||||||   ||  | |||| |||||   | ||||    
T  25202107 attttgatgattagagaaattaggttttgatttggaattgattgttaaaaaggtagataattcaatgaattagtgtacaatttgatgttca--ttctaga 25202010  T
Q  224 ataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  25202009 ataaacataggttgagtttcctattgaatttgggattt 25201972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 3263936 - 3264009
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaatt 91  Q
    ||||||||||| |||||||||| |||||||||||||||| ||| |||| ||||||||||||||||||| |||||    
T  3263936 gggagagagaccgccgatcatcaatactaaggtaagggtcggattaaccttctctaattctaagtaatataatt 3264009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 15446828 - 15446905
Alignment:
Q  5 aggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||| |||  ||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  15446828 aggagaaccaagagggagagagatcgccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15446905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 33565140 - 33565064
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  33565140 ctaaggtaagggtgtgactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 33565064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 48631270 - 48631170
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| |||| ||||||||| || |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  48631270 aattgattgttgaaagtgtaggtaattcaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggga 48631171  T
Q  259 t 259  Q
    |    
T  48631170 t 48631170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 13185948 - 13185862
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||||||||||||||||||||||||||| ||||| || ||||||| ||||  |||||||||| | ||||||| ||| |||||    
T  13185948 ctaaggtaagggtgggactaactttctctaattttaagtgatataattctaaaaatcgaatttaacaagttgtaggttgtagttttg 13185862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 48 - 120
Target Start/End: Original strand, 11885560 - 11885632
Alignment:
Q  48 ggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  11885560 ggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggt 11885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 35960927 - 35961003
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||||||| |||||||||||||||||| ||  | |||||||||||| ||||||||||| | |||||||    
T  35960927 ctaaggtaagggtgggattaactttctctaattctatgtggtataattctgaaaattgaatttaacaagttgtaggt 35961003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 130
Target Start/End: Complemental strand, 11563791 - 11563692
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||| |  |||||||||||||||||||||| ||||||||||||||||  | ||||||||||||   ||||||||| | ||||||| ||| |||||    
T  11563791 ccgatcatctaatctaaggtaagggtgggactaaccttctctaattctaagtggtataattctgaaaatcaaatttaacaagttgtaggttgtagttttg 11563692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 55291754 - 55291852
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| || ||||||||||| ||  |||| | ||||||||||    
T  55291754 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggttt-gggttgatgaaatttggtttttttgggtgaaaattg 55291852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 261
Target Start/End: Original strand, 3527270 - 3527372
Alignment:
Q  161 attgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggct-gtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||| ||||||||||||| ||| ||||||||| |||| | ||| ||||||  | |||||||||||| ||||||||||||||||  |||||||||    
T  3527270 attgattgttgaaagagtaggtaagccattgaattaacgtaaggaatgaggttcagaattgtagaataaacataggttgagtttcctattgaatttggga 3527369  T
Q  259 ttt 261  Q
    |||    
T  3527370 ttt 3527372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 37641462 - 37641524
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaac 65  Q
    ||||||||| |||  ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  37641462 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaac 37641524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 43549808 - 43549870
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  43549808 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 43549870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 40808049 - 40807996
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  40808049 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40807996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 44274471 - 44274418
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  44274471 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 44274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 17045018 - 17044966
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17045018 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17044966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 17047178 - 17047126
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17047178 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17047126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 17541486 - 17541434
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17541486 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 22306583 - 22306635
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  22306583 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 22306635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 3803713 - 3803580
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  || ||| |    
T  3803713 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctggaaact 3803616  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgcc 333  Q
    |||||||||| ||||| |||||| | ||||||||||    
T  3803615 ggtctgttcccgtagagttgtctgtcgcaactcgcc 3803580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 199 - 266
Target Start/End: Original strand, 46722739 - 46722806
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtt 266  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| ||||    
T  46722739 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttcggtt 46722806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 5200242 - 5200280
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5200242 ctaaggtaagggtgggactaactttctctaattctaagt 5200280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 15566797 - 15566743
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  15566797 ctaaagtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 15566743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 16050980 - 16050942
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  16050980 ctaaggtaagggtgggactaactttctctaattctaagt 16050942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 17518859 - 17518925
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |  |||||| ||||||||||||||||||||||||||||||||  | |||||||||||    
T  17518859 ccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaa 17518925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 17533721 - 17533787
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |  |||||| ||||||||||||||||||||||||||||||||  | |||||||||||    
T  17533721 ccgatcatctaatctaaggcaagggtgggactaactttctctaattctaagttgtataattctgaaa 17533787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 18699431 - 18699505
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  18699431 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 18699505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 19568207 - 19568245
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19568207 ctaaggtaagggtgggactaactttctctaattctaagt 19568245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 22758835 - 22758909
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||| ||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  22758835 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 22758909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 29544186 - 29544244
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    ||||||| || ||||||  ||||||||||||| ||||||||||||||||||||||||||    
T  29544186 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggg 29544244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 40812886 - 40812848
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40812886 ctaaggtaagggtgggactaactttctctaattctaagt 40812848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 42323970 - 42324056
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||| || | ||||| |||||  | |||||||||||| ||||||| ||||| ||||||| ||| |||||    
T  42323970 ctaaggtaagggtgggactaacattatttaattttaagttgtataattctgaaaattgaatttgacatgttgtaggttgtagttttg 42324056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 49900796 - 49900730
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |  ||||||||||||||||||||| |||||||||||||||||  | |||||||||||    
T  49900796 ccgatcatctaatctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaa 49900730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 11259483 - 11259411
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 118  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| |||||||| |||| |||||    
T  11259483 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgaatttagcatgttgtag 11259411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 14967263 - 14967203
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattct 78  Q
    ||||||||||| |||||||||| ||||||||||||||| ||||||||| |||  |||||||    
T  14967263 gggagagagaccgccgatcatcaatactaaggtaagggggggactaaccttcaataattct 14967203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 6820069 - 6820010
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||| |||||||||||    
T  6820069 taagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 6820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 10555206 - 10555148
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  10555206 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 10555148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 18890323 - 18890265
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| ||||||| ||| |||||| || ||||| ||||||||||||||||||||    
T  18890323 taagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggg 18890265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 52465345 - 52465391
Alignment:
Q  19 ggagagagactgccgatcatccatactaaggtaagggtgggactaac 65  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||    
T  52465345 ggagagagaccgccgatcatcaatactaaggtaagggtgtgactaac 52465391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 52988831 - 52988923
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    ||||||||||| || ||||||| ||||||||||||||||| ||||||| |||  ||||||| ||| || | |||||||| | |||||||||||||    
T  52988831 gggagagagaccgcagatcatcaatactaaggtaagggtgagactaaccttcaataattctgagt-atgtgattctgaaga-tgaatttaacatg 52988923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 14508896 - 14508847
Alignment:
Q  48 ggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  14508896 ggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 14508847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 6805043 - 6805139
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| |||||||||| || | ||| ||||| ||||||||||||||    
T  6805043 ttgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagttttctatcaaatttggg 6805139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 10311575 - 10311527
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  10311575 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 10311527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 17539158 - 17539106
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| |||||||||| |||||||||||||  | |||||||||||    
T  17539158 taaggtaagggtgagactaactttatctaattctaagttgtataattctgaaa 17539106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Complemental strand, 17694115 - 17694045
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||| ||||||||||||||||||||||||  | ||||||| |||| ||| |||| |||| |||||||    
T  17694115 gtaagggtgagactaactttctctaattctaagttgtataattct-aaaattgagtttagcatgttgtaggt 17694045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 21845732 - 21845778
Alignment:
Q  126 ttttgatgattagagaaattaggttttggtttggaattgattgttaaa 173  Q
    |||||||| ||| ||||||||||||||| |||||||||||||||||||    
T  21845732 ttttgatg-ttatagaaattaggttttgatttggaattgattgttaaa 21845778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 3160742 - 3160808
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| |||||||||||||| || |||||||| |||| |||||| ||| ||| ||||||||||    
T  3160742 ttgattgttgaaagagtaggtaattcaatgaattaatataaaaattgatgtttaggttgtagaataa 3160808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 9510915 - 9510953
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  9510915 ctaaggtaagggtgaaactaactttctctaattctaagt 9510953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 9518890 - 9518928
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  9518890 ctaaggtaagggtgaaactaactttctctaattctaagt 9518928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 10563761 - 10563723
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||| ||||||||||||||||||||||| |||||    
T  10563761 ctaaggtaatggtgggactaactttctctaattttaagt 10563723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 43888756 - 43888830
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||| |  ||  |||||||||||  ||||||||||||||  | |||||||||| |||||||    
T  43888756 aaggtaagggtgggactagccatcaataattctaagtgttttaattctgaaaatggtatttaacatgttgtaggt 43888830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 43929290 - 43929228
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    ||||| |||| ||| ||| |||||||||| |  ||||| ||||||||||||||||||||||||    
T  43929290 taagacttgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggattt 43929228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 49968859 - 49968944
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttga 131  Q
    ||||||||| ||||||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | ||||| | ||| ||||||    
T  49968859 taaggtaagagtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtagcttgtagttttga 49968944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 12509349 - 12509402
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||| ||| |||| |||||||||||  | |||||||||||    
T  12509349 ctaaggtaagggtgggacaaaccttctttaattctaagttgtataattctgaaa 12509402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 15931508 - 15931545
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  15931508 taaggtaaaggtgagactaactttctctaattctaagt 15931545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 41172371 - 41172408
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||||||||||||||||||| || |||||    
T  41172371 taaggtaagggtgggactaactttctctacttataagt 41172408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 227
Target Start/End: Original strand, 12155141 - 12155209
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||||| |||| |||||||| ||| ||||||||||| | |||||| ||| ||| ||||||||||    
T  12155141 aattgattgttgaaagtgtaggtaacccaatgaattaacatgaaaattgatgttgaggttgtagaataa 12155209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 35354654 - 35354602
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||| |||| |||||||||||||||||||||| |||||  | |||||||||||    
T  35354654 taagctaagtgtgggactaactttctctaattttaagttgtataattctgaaa 35354602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 268; Significance: 1e-149; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 40620611 - 40620249
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  40620611 gggagagagaccgccgatcatcaatactaaggtaagggtgggaataactttctctaattctaagtattttaattctgaaaattggatttaacatgatgta 40620512  T
Q  118 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  40620511 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggc 40620412  T
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttg 317  Q
     |||| ||||||| |||||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  40620411 cgtaggataaacataggttgagtttcctctcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtctgttcccgtagatttg 40620313  T
Q  318 tctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||  | ||| ||||||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  40620312 tccgtcgcacctcgccacaacgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 40620249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 45 - 381
Target Start/End: Original strand, 10694245 - 10694580
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaat 144  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  10694245 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaaactcgatttaacatgatgtaggtggtaattttgatgattagagaaat 10694344  T
Q  145 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 244  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10694345 taggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 10694444  T
Q  245 tatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatagcaactcgccacaacaagtaa 344  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||||||  | || |||||||||| | |||||    
T  10694445 tatcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaattggtctgttctcgtagatttgtccgtcgccactcgccacagcgagtaa 10694543  T
Q  345 acttactcgccctgcgagctgcactttgacagcatcc 381  Q
    || ||||||||  ||||||| ||||||||||||||||    
T  10694544 acgtactcgcctcgcgagcttcactttgacagcatcc 10694580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 15009057 - 15008685
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa-ctg 101  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||    
T  15009057 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaaactg 15008958  T
Q  102 aatttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataa 201  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||      |||||||||||||||||| |||||| || |||||||||||||    
T  15008957 gatttaacatgatgtaggtggtaattttgatgattagagaaattaggttttg------aattgattgttaaagagttggtaattcaatgaattaacataa 15008864  T
Q  202 gaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtc 301  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||| |||||    
T  15008863 gaattaaagttcaggctgtagaataaacataggttgagtttcctataaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtc 15008765  T
Q  302 tgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||| |||||||||||  | ||||||||||||| | ||||||||||||| ||  |||| |||||||||||||||||||    
T  15008764 tgttcccgtagatttgtccgtggcaactcgccacagcgagtaaacttactcacctcgcgatctgcactttgacagcatcc 15008685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 45 - 381
Target Start/End: Original strand, 10908011 - 10908346
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaat 144  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  10908011 taaggtaagggtgagactaaatttctctaattctaagtaatttaattctgaaaactcgatttaacatgatgtaggtggtaattttgatgattagagaaat 10908110  T
Q  145 taggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcc 244  Q
    |||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  10908111 taggttttggtttggaattgattgttaaagagtaggtaattcaattaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcc 10908210  T
Q  245 tatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatagcaactcgccacaacaagtaa 344  Q
    |||||||||||  |||| || |||||||||||||||||||||||||||||||||||||||||  |||||||||||  | || |||||||||| | |||||    
T  10908211 tatcaaatttgttattt-gggttgatgaaattggggcttttggagtgaaaattggtctgttctcgtagatttgtccgtcgccactcgccacagcgagtaa 10908309  T
Q  345 acttactcgccctgcgagctgcactttgacagcatcc 381  Q
    || ||||||||  ||||||| ||||||||||||||||    
T  10908310 acgtactcgcctcgcgagcttcactttgacagcatcc 10908346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 199 - 381
Target Start/End: Complemental strand, 28386143 - 28385962
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaa-ttggggcttttggagtgaaaatt 297  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| |||  ||||||| || ||| ||||||  || ||| |    
T  28386143 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaatttgggtttttggc-tggaaact 28386046  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||| || | ||||| |||||| | ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  28386045 ggtctatttccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 28385962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 199 - 381
Target Start/End: Original strand, 49547096 - 49547277
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  |||||| |    
T  49547096 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tgaaaact 49547193  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||| ||||| ||||   | ||||||||||||| | ||||||||||||||||  ||||||| |||||||||| |||||    
T  49547194 ggtctgttcccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagcttcactttgacatcatcc 49547277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 14187037 - 14186973
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  14187037 gggagagagaccgccgatcatcaatactaaggtaagggtgggagtaactttctctaattctaagt 14186973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 199 - 368
Target Start/End: Complemental strand, 33849642 - 33849474
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||| | ||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  33849642 taagaatcgatgttcatgttgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 33849545  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    |||||||||| |||||  |||   | ||||||||||||| | ||||||||||||||||  |||||||||||    
T  33849544 ggtctgttcccgtagagctgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcac 33849474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 125 - 261
Target Start/End: Complemental strand, 35660862 - 35660724
Alignment:
Q  125 attttgatgattagagaaattaggttttgg-tttggaattgattgttaa-agagtaggtaatccagtgaattaacataagaattgaagttcaggctgtag 222  Q
    |||||||||||||||||||||||| ||||  |||  ||||||||||| | ||||||||||||||  |||| |||  ||| |||||  ||||||| |||||    
T  35660862 attttgatgattagagaaattagggtttgaatttaaaattgattgttgagagagtaggtaatccgatgaagtaaggtaataattggtgttcaggttgtag 35660763  T
Q  223 aataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    ||||| || | ||| ||||||||||||||||||||||||    
T  35660762 aataatcatatgttaagtttcctatcaaatttgggattt 35660724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 9924207 - 9924131
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  9924207 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 9924131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 254
Target Start/End: Complemental strand, 9622425 - 9622330
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaattt 254  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  ||||||||||||| |||||||||||||| | ||||||    
T  9622425 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagtttccttttaaattt 9622330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 368
Target Start/End: Complemental strand, 15535021 - 15534853
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| | |||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  15535021 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 15534924  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    |||||||||| ||||  ||||   | ||||||||||||| | ||||||||||||||||  |||||||||||    
T  15534923 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcac 15534853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 16296809 - 16296707
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||||||  ||||||||  ||| |||||  ||||||| ||| |||||| || ||||| |||||||||||||||||||||    
T  16296809 aattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcaggttgttgaataatcataggttaagtttcctatcaaatttggga 16296710  T
Q  259 ttt 261  Q
    |||    
T  16296709 ttt 16296707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 21249 - 21151
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 142  Q
    ||||||||||| || ||||||| |||| |||||||||||  | ||||||||| || ||||||||||||| ||||||| ||| |||||| |||| |||||    
T  21249 ctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaa 21151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 9870443 - 9870529
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||| ||||||||||||||||||||  |||||||||||  | |||||||||||| || |||| ||||||||||||| ||| |||||    
T  9870443 ctaagctaagggtgggactaactttccataattctaagttgtataattctgaaaattggatttgacatgatgtaggttgtagttttg 9870529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 112
Target Start/End: Complemental strand, 10057740 - 10057648
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| |||  ||||||| ||| || | |||||||| | |||||||||||||    
T  10057740 gggagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttcaataattctgagt-atgtgattctgaaga-tgaatttaacatg 10057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 11478652 - 11478718
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    |||||||||||||| ||||||||| ||||||||||||||  | |||||||||||| |||||||||||    
T  11478652 ctaaggtaagggtgagactaacttcctctaattctaagtggtataattctgaaaattgaatttaaca 11478718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 21062694 - 21062596
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 142  Q
    |||||||||||||||||||||||||||||||||||||||  | ||| | |||||| || |||||||| |  |||||| ||| |||||| |||| |||||    
T  21062694 ctaaggtaagggtgggactaactttctctaattctaagtgttataactatgaaaattggatttaacaagtggtaggttgtagttttgaggatttgagaa 21062596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 368
Target Start/End: Complemental strand, 36038710 - 36038542
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  36038710 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 36038613  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    |||||||||| ||||  ||||   | ||||||||||| | | ||||||||||||||||  ||||| |||||    
T  36038612 ggtctgttcccgtagggttgttcgtcgcaactcgccatagcgagtaaacttactcgcctcgcgagatgcac 36038542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 15115275 - 15115222
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  15115275 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 15115222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 232 - 368
Target Start/End: Complemental strand, 9638874 - 9638739
Alignment:
Q  232 aggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatagcaactcg 331  Q
    ||||| |||||||||||||||||||| ||| |||  |||||||    |  |||| || |||||||||||||||||| ||||  |||||| | ||||||||    
T  9638874 aggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgagtttttgactgaaaattggtctgttcccgtagtgttgtctgtcgcaactcg 9638776  T
Q  332 ccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    ||||| | ||||| ||||||||||  |||||||||||    
T  9638775 ccacagcgagtaagcttactcgcctcgcgagctgcac 9638739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 11425995 - 11425943
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  11425995 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 11425943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 162 - 261
Target Start/End: Original strand, 19434775 - 19434875
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||||||||||||||   ||||||||   || |||||  ||||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  19434775 ttgattgttgaaagagtaggtaatctgatgaattaaagaaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 19434874  T
Q  261 t 261  Q
    |    
T  19434875 t 19434875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 25091705 - 25091653
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  25091705 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 25091653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 53630474 - 53630526
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  53630474 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 53630526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 19434558 - 19434596
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  19434558 ctaaggtaagggtgggactaactttctctaattctaagt 19434596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 35811376 - 35811413
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||||||||||||||||||||||||||||    
T  35811376 taaggtaagggtgggactaactttctctaattctaagt 35811413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 10356436 - 10356488
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||| |||||||||||||||||||||||||||  | |||||||||||    
T  10356436 taaggtaaggttgggactaactttctctaattctaagttgtataattctgaaa 10356488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 14549586 - 14549486
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||||||| ||||||   ||||||||  ||| |||||  ||||||| |||||||||| || | ||| |||||||||||||||||||||||    
T  14549586 ttgattgttgaaagagtatgtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatatgttaagtttcctatcaaatttgggatt 14549487  T
Q  261 t 261  Q
    |    
T  14549486 t 14549486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 37019723 - 37019648
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||| |||||||||||||||||| |||||  | |||||||| ||| ||| ||||||||| |||||||    
T  37019723 ctaaggtaagggtgtgactaactttctctaattttaagttgtataattctg-aaattgagtttaacatgttgtaggt 37019648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 15344834 - 15344775
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||| |||||||||||    
T  15344834 taagaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 15344775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 15613143 - 15613069
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 119  Q
    |||||||||||||||||||||| |||| |||||||||||  | |||||||| ||| || |||||||||| ||||||    
T  15613143 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctg-aaattggatttaacatgttgtagg 15613069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 51993614 - 51993540
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 119  Q
    |||||||||||||||||||||| |||| |||||||||||  | |||||||| ||| || |||||||||| ||||||    
T  51993614 ctaaggtaagggtgggactaaccttctttaattctaagttgtgtaattctg-aaattggatttaacatgttgtagg 51993540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 2424386 - 2424424
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  2424386 ctaaggtaagggtgagactaactttctctaattctaagt 2424424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 14549813 - 14549775
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  14549813 ctaaggtaagggtgagactaactttctctaattctaagt 14549775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 16277440 - 16277498
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  16277440 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 16277498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 18230640 - 18230578
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||||||| ||||| |||| || ||| | ||||||||||||||||||||||||    
T  18230640 taagaattgatgttcaggttgtaggataatcataggataagtttcctatcaaatttgggattt 18230578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 19243666 - 19243577
Alignment:
Q  30 gccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||| ||| |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  19243666 gccgatcattcattctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 19243577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 53387050 - 53387108
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||||||||||||||||||    
T  53387050 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttggg 53387108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 6633541 - 6633589
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  6633541 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 6633589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 18462959 - 18462859
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||| |||||||||||| ||||||||||| | |||||| ||||||  ||||||| ||  | ||||   ||||||| ||||||||||||||    
T  18462959 ttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcagattgtagaacaacaataggtaatgtttcctgtcaaatttgggatt 18462860  T
Q  261 t 261  Q
    |    
T  18462859 t 18462859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 19610376 - 19610324
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| |||||||||||||||||| |||||  | |||||||||||    
T  19610376 taaggtaagggtgagactaactttctctaattttaagttgtataattctgaaa 19610324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 42875849 - 42875797
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||| | |||||||||||  | |||||||||||    
T  42875849 taaggtaagggtgggactaactttatataattctaagttgtataattctgaaa 42875797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 12611810 - 12611751
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  12611810 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 12611751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 49 - 120
Target Start/End: Original strand, 15011474 - 15011545
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||| |||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  15011474 gtaagggtaggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 15011545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 14186105 - 14186067
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  14186105 ctaaggtaagggtgggagtaactttctttaattctaagt 14186067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 14477568 - 14477502
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| |||| |||||||||||| ||||||||||||  |||||| ||||||  ||||||||||    
T  14477568 ttgattgttgaaagtgtaggtaatccaatgaattaacatagaaattgatgttcagattgtagaataa 14477502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 16998577 - 16998540
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  16998577 taaggtaagagtgagactaactttctctaattctaagt 16998540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 27996844 - 27996778
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    |||||||||||||||||||||| |||  ||||||| ||| || | |||||||||| |||||||||||||    
T  27996844 ctaaggtaagggtgggactaaccttcaataattctgagt-atgtgattctgaaaa-tgaatttaacatg 27996778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Original strand, 46001535 - 46001583
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  46001535 gtaagggtgagactaactttctctaattctacgttgtataattctgaaa 46001583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 5123 - 4753
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5123 agaggagaaccaagagggagagagactgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 5024  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5023 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataag 4924  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    ||||||||||       ||||||||||| |||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||| |||| |    
T  4923 aattgaagtt-------tagaataaacataggttgagtttcctttcaaattt-ggaattagggttgatgaaattggggcttttggagtgaaaactggtat 4832  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||| ||||||||  |  |  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  4831 gttcccgtagattttcccgtcccaactcgccacaacgagtaaacttactcgccccgcgagctgcactttgacagcatcc 4753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 5123 - 4753
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5123 agaggagaaccaagagggagagagactgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 5024  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5023 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataag 4924  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    ||||||||||       ||||||||||| |||||||||||||| |||||||| ||| ||||| |||||||||||||||||||||||||||||| |||| |    
T  4923 aattgaagtt-------tagaataaacataggttgagtttcctttcaaattt-ggaattagggttgatgaaattggggcttttggagtgaaaactggtat 4832  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||| ||||||||  |  |  |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  4831 gttcccgtagattttcccgtcccaactcgccacaacgagtaaacttactcgccccgcgagctgcactttgacagcatcc 4753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 263; Significance: 1e-146; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 3 - 333
Target Start/End: Original strand, 69811 - 70140
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  69811 agaggagaaccaagagggagagagactgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 69910  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  69911 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataag 70010  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||||     
T  70011 aattgaagttcaggctgtagaaaaaaaataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtca 70109  T
Q  303 gttccggtagatttgtctatagcaactcgcc 333  Q
    ||||| |||||||||||  | ||||||||||    
T  70110 gttcccgtagatttgtccgtcgcaactcgcc 70140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 72336 - 72277
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  72336 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 72277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 57)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 25184268 - 25183906
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    ||||||||||| ||| |||||| ||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||  |||||||||| ||||    
T  25184268 gggagagagaccgccaatcatcaatactaaggtaagggtgagactaactttctctaattctaagtattttaattctgaaaactagatttaacatgttgta 25184169  T
Q  118 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |    
T  25184168 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcagac 25184069  T
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttg 317  Q
    ||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  25184068 tgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtctgttcccgtagatttg 25183970  T
Q  318 tctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||  | ||||||||||||| | |||| |||||||||||  ||||||| ||||||||||||||||    
T  25183969 tccgtcgcaactcgccacagcgagtacacttactcgcctcgcgagctacactttgacagcatcc 25183906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 18 - 381
Target Start/End: Original strand, 21080942 - 21081304
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21080942 gggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgta 21081041  T
Q  118 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggc 217  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||||||||||    
T  21081042 agtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaaaacaatgaattaacataagaattgaagttcaggc 21081141  T
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttg 317  Q
    ||||||||||||| | ||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||  ||||| |||| ||||||||     
T  21081142 tgtagaataaacataagttgagtttcctatcaaatttaggattt-gggttgatgaaattggggcttttggagtgaaaacgggtcttttcccgtagatttt 21081240  T
Q  318 tctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||  | || |||||||||| | ||||||||||||||||  ||||| ||||||||||||||||||    
T  21081241 tccgtcgccactcgccacagcgagtaaacttactcgcctcgcgagttgcactttgacagcatcc 21081304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 21915718 - 21915341
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||     
T  21915718 agaggagaaccaagagggagagagaccgccgatcatcaatactaaagtaagggtgtgactaactttctctaattctaagtattttaattctgaaaactgg 21915619  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  21915618 atttaacatgatgtaggtggtaattttgatgaatagagaaattaggttttggtttggaattgattgttaaagaataggtaattcaatgaattaacataag 21915519  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||| |    
T  21915518 aattgaagttcaggctgtagaataaacataggttgagtttcctataaaatttgggatttagg-ttgatgaaattggggcttttggagtgaaaactggttt 21915420  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||  || |||||||  | ||||||||||||  | ||||||| ||||||||  |||| ||||||||||||| |||||    
T  21915419 gttcccatacatttgtccgtcgcaactcgccacggcgagtaaacatactcgcctcgcgatctgcactttgacatcatcc 21915341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 53 - 381
Target Start/End: Original strand, 18357975 - 18358302
Alignment:
Q  53 gggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaattaggtttt 152  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18357975 gggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgtaggtggtaattttgatgattagagaaattaggtttt 18358074  T
Q  153 ggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaat 252  Q
    |||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  18358075 ggtttggaattgattgttaaagagtatgtaattcaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaat 18358174  T
Q  253 ttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactc 352  Q
    ||||||||| || |||||||||||||||||||||||||||||| |||| |||||| |||||||||||  | |||||||||||||   ||||||||||| |    
T  18358175 ttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtttgttcccgtagatttgtccgtcgcaactcgccacagtgagtaaacttaccc 18358273  T
Q  353 gccctgcgagctgcactttgacagcatcc 381  Q
    |||  ||||| ||||||||||||||||||    
T  18358274 gcctcgcgagttgcactttgacagcatcc 18358302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 199 - 379
Target Start/End: Complemental strand, 31346019 - 31345840
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||    
T  31346019 taagaattgaagttcaggctatagaataaacataggttgagtttcctatcaaatttggtatttgggtt-gatgaaattggggcttttggagtgaaaactg 31345921  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    ||||||||| |||||||||||  | ||||||||||||| | |||| |||||||||||  ||||||| ||||||||||||||    
T  31345920 gtctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcctcgcgagctacactttgacagcat 31345840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 199 - 380
Target Start/End: Original strand, 23338552 - 23338732
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||| ||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  23338552 taagaatcgatgttcaggttgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 23338649  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatc 380  Q
    |||||||||| ||||| ||||   | ||||||||||||| | ||||||||||||||||  |||||||||||  ||||||||||    
T  23338650 ggtctgttcccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcacagtgacagcatc 23338732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 3 - 82
Target Start/End: Complemental strand, 357975 - 357896
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  357975 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagt 357896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 22502037 - 22501939
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 129  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||| ||| ||| ||||    
T  22502037 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtgggttgtagtttt 22501939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 31 - 129
Target Start/End: Complemental strand, 22509971 - 22509873
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 129  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||||| ||| ||| ||| ||||    
T  22509971 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgagaattggatttaacatgttgtgggttgtagtttt 22509873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 160 - 260
Target Start/End: Original strand, 12626546 - 12626647
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||||||  |||||||||| ||||||||| ||||||| ||||||||||||| | ||||||||||||||  |||||||||    
T  12626546 aattgattgttgaaagagtaggtaatccgatgaattaacagaagaattgatgttcaggttgtagaataaacataagttgagtttcctattgaatttggga 12626645  T
Q  259 tt 260  Q
    ||    
T  12626646 tt 12626647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 14694379 - 14694303
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||| |||||| || ||||||||||||||||||    
T  14694379 ctaaggtaagggtgagactaactttctataattctaagtaatttaattttgaaaattggatttaacatgatgtaggt 14694303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 19647172 - 19647066
Alignment:
Q  160 aattgattgttaaaga-gtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| || | |||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  19647172 aattgattgttgaaaatgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttggga 19647073  T
Q  259 tttaggt 265  Q
    |||||||    
T  19647072 tttaggt 19647066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 25142257 - 25142171
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| | ||||||| ||| |||||    
T  25142257 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttg 25142171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 40912414 - 40912320
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |||  | |||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  40912414 agaggagaaccaagagagagagagacaaccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 40912320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 27852721 - 27852645
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  27852721 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 27852645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 199 - 375
Target Start/End: Original strand, 13100887 - 13101062
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    ||||||| || |||||| ||||||||||| || ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| |    
T  13100887 taagaatcgatgttcagactgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaact 13100984  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgaca 375  Q
    ||  |||||| |||||  ||||| | ||||||||||||| | ||||||||||||||||  ||||||||||||||||||    
T  13100985 ggcatgttcccgtagagatgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgaca 13101062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 125 - 257
Target Start/End: Original strand, 36734530 - 36734664
Alignment:
Q  125 attttgatgattagagaaattaggttttggtttggaattgattgttaaa--gagtaggtaatccagtgaattaacataagaattgaagttcaggctgtag 222  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||   | ||| |||| || |||||||   ||  |||||  ||||||| |||||    
T  36734530 attttgatgattagagaaattagattttgatttggaattgattgttaaaataaatagataattcaatgaattagtgtacaaattggtgttcaggttgtag 36734629  T
Q  223 aataaacagaggttgagtttcctatcaaatttggg 257  Q
    ||||| |  ||||| ||||||||||||||||||||    
T  36734630 aataatcttaggttaagtttcctatcaaatttggg 36734664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 368
Target Start/End: Complemental strand, 20262059 - 20261891
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| | |||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  20262059 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 20261962  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    |||||||||| ||||  ||||   | ||||||||||||| | ||||||||||||||||  |||||||||||    
T  20261961 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcac 20261891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 3539890 - 3539805
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 129  Q
    ||||||||||||||||||||||||||||||||| |||||  | ||||||||||||  |||||||||| | ||||||| ||| ||||    
T  3539890 ctaaggtaagggtgggactaactttctctaattttaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagtttt 3539805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 149620 - 149755
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||||||  ||||||||  ||| |||||  ||||||  ||| |||||| || ||||| |||||||||||||||||||||    
T  149620 aattgattgttgaaagagtaggtaatccgatgaattaaggtaataattggtgttcagattgttgaataatcataggttaagtttcctatcaaatttggga 149719  T
Q  259 tttaggtttgatgaaattggggcttttggagtgaaaa 295  Q
    ||| || | ||||||||| ||| |||| | |||||||    
T  149720 ttt-gggtagatgaaatttgggttttttgggtgaaaa 149755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 257
Target Start/End: Original strand, 1383768 - 1383864
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    ||||||||| ||||||||||||||||  ||||||||| ||| |||||   |||||| |||||||||| || ||||| ||||||||||||||||||||    
T  1383768 ttgattgttgaaagagtaggtaatccgatgaattaacgtaataattggtcttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 1383864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 24516239 - 24516164
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  24516239 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 24516164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 261
Target Start/End: Complemental strand, 45535862 - 45535762
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||  | ||||   ||||||| ||||||||||||||    
T  45535862 ttgattgttgaaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttgggatt 45535763  T
Q  261 t 261  Q
    |    
T  45535762 t 45535762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 10684085 - 10684249
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| | |||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  10684085 taagaatcgatgttcagattgtagaataaacatatgttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 10684182  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagct 364  Q
    |||||||||| ||||  ||||   | ||||||||||||| | ||||||||||||||||  |||||||    
T  10684183 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagct 10684249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 17307552 - 17307486
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  17307552 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 17307486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 5031129 - 5031181
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  5031129 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 5031181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 24780840 - 24780892
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  24780840 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24780892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 25046171 - 25046079
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgatt 136  Q
    |||||||||||||||||||||| |||| |||||||||||  | ||||||||| || || |||||||||| ||||||  ||| |||||| ||||    
T  25046171 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatt 25046079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 2523747 - 2523821
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||  ||| ||| ||||||||| |||||||    
T  2523747 taaggtaagggtgggactaactttctctaattctaagttgtataattct-taaattgagtttaacatgttgtaggt 2523821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 34858165 - 34858212
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaac 65  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  34858165 gggagagagaccgccgatcatcaatactaaggtaagggtgggactaac 34858212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 34873227 - 34873274
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaac 65  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  34873227 gggagagagaccgccgatcatcaatactaaggtaagggtgggactaac 34873274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 5986230 - 5986132
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 142  Q
    |||||||||||||||||| ||| |||| |||||||||||  | |||||||||||| || |||||||| | |||||||  || |||||| |||| |||||    
T  5986230 ctaaggtaagggtgggacgaaccttctttaattctaagttgtataattctgaaaattggatttaacaagttgtaggttatagttttgaggatttgagaa 5986132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 41301082 - 41301144
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||| |||||||||    
T  41301082 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggattt 41301144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 34491213 - 34491258
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggacta 63  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||    
T  34491213 gggagagagaccgccgatcatcaatactaaggtaagggtgggacta 34491258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 9975981 - 9975929
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  9975981 taaggtaagggttggactaactttctctaattctaagttgtataattctgaaa 9975929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 45535722 - 45535666
Alignment:
Q  171 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    |||| |||||||||||| ||||||||||||| |||||| ||||||| ||||||||||    
T  45535722 aaagtgtaggtaatccaatgaattaacataaaaattgatgttcaggttgtagaataa 45535666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 27484447 - 27484514
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttct 70  Q
    ||||||||| |||  |||||||| ||  ||||||||| ||||||||||||||||| ||||||||||||    
T  27484447 agaggagaaccaagagggagagataccaccgatcatcaatactaaggtaagggtgagactaactttct 27484514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 265
Target Start/End: Original strand, 28345209 - 28345256
Alignment:
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggt 265  Q
    |||||||||| || ||||| ||||||||||||||||||||||||||||    
T  28345209 tgtagaataatcataggttaagtttcctatcaaatttgggatttaggt 28345256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 18390229 - 18390279
Alignment:
Q  60 actaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    ||||||||||||||||||||||| || ||||||||||||  ||||||||||    
T  18390229 actaactttctctaattctaagtgatataattctgaaaatagaatttaaca 18390279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 21072841 - 21072899
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| ||||||| ||| |||||| || ||||| ||||||||||||||||||||    
T  21072841 taagaattgatgttcaggttgtggaataatcataggttaagtttcctatcaaatttggg 21072899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 23068408 - 23068482
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||| ||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  23068408 aaggtaagggtgagactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 23068482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 24884297 - 24884231
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| | ||||||||    
T  24884297 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttatagaataa 24884231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 257
Target Start/End: Original strand, 28652677 - 28652763
Alignment:
Q  171 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    ||||||||||||||||| ||||||||  ||| |||||| |||||||  ||||||||| || |||  |||||| |||| |||||||||    
T  28652677 aaagagtaggtaatccaatgaattaaggtaataattgatgttcaggtagtagaataatcataggaagagttttctataaaatttggg 28652763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 43707200 - 43707258
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| ||||| | |||||||||| || ||||| ||||||||||||||||||||    
T  43707200 taagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggg 43707258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 19201199 - 19201252
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||| |||||||| ||||||||||||||||||||||||  | |||||||||||    
T  19201199 ctaagttaagggtgagactaactttctctaattctaagttgtataattctgaaa 19201252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 24436700 - 24436648
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||| |||||||||||||||||||||| ||||||||||  | |||||||||||    
T  24436700 taagataagggtgggactaactttctcgaattctaagttgtataattctgaaa 24436648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 37270747 - 37270699
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  37270747 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 37270699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 47 - 82
Target Start/End: Original strand, 1383545 - 1383580
Alignment:
Q  47 aggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||| ||||||||||||||||||||||||    
T  1383545 aggtaagggtgagactaactttctctaattctaagt 1383580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 39683264 - 39683190
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||||||||||| |||  ||||  ||||| ||| | ||||||||| ||||||||||||| |||||||    
T  39683264 taaggtaagggtgggactaacattcaataatcttaagtcattga-ttctgaaaattgaatttaacatgttgtaggt 39683190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 20590435 - 20590493
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| |||||||  ||||||||| || ||||| ||||| ||||||||||||||    
T  20590435 taagaattgatgttcaggtggtagaataatcataggttaagttttctatcaaatttggg 20590493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 44072610 - 44072572
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||| ||||||||||| ||||||||||||    
T  44072610 ctaaggtaagggtgagactaactttcactaattctaagt 44072572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 210 - 266
Target Start/End: Original strand, 14183631 - 14183687
Alignment:
Q  210 gttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtt 266  Q
    ||||||| ||| |||||| || |||| |||||||||||||||||||| |||| ||||    
T  14183631 gttcaggttgtggaataatcataggtagagtttcctatcaaatttggaatttgggtt 14183687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 22251448 - 22251500
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||  ||||| |||||||||||||||||  | |||||||||||    
T  22251448 taaggtaagggtgaaactaattttctctaattctaagttgtataattctgaaa 22251500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 22501786 - 22501730
Alignment:
Q  171 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    |||| |||||||||||| |||||||||||| ||||||| ||||| | ||| ||||||    
T  22501786 aaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataa 22501730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 227
Target Start/End: Complemental strand, 22509720 - 22509664
Alignment:
Q  171 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    |||| |||||||||||| |||||||||||| ||||||| ||||| | ||| ||||||    
T  22509720 aaagtgtaggtaatccaatgaattaacatatgaattgatgttcaagttgtggaataa 22509664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 24792758 - 24792824
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    |||||||||||||||||||||| |||  ||||||| ||| || | |||||| |||||||||||||||||    
T  24792758 ctaaggtaagggtgggactaaccttcaataattctgagt-atgtgattctg-aaactgaatttaacatg 24792824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 34401735 - 34401810
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  34401735 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 34401810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 259; Significance: 1e-144; HSPs: 3)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 2031 - 1654
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||||||||  ||||||||| ||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| |     
T  2031 agaggagaaccaagagggagagagaccaccgatcatcaatactaaggaaagggtgggactaactttatctaattctaagtattttaattctgaaaacggt 1932  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  1931 atttaacatgatgtaggtggtaattttgatgattagagaaattattttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataag 1832  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||||||| ||||||    
T  1831 aattgaagttcaggctgtagaataaacataggttgagtttcctatcaaattttggattt-gggttgatgaaattggggcttttggagtgaaaactggtct 1733  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||| |||||||||||  | || |||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  1732 gttcccgtagatttgtccgtcgccactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 1654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 5044 - 5082
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5044 ctaaggtaagggtgggactaactttctctaattctaagt 5082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 10754 - 10792
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10754 ctaaggtaagggtgggactaactttctctaattctaagt 10792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 23479176 - 23478799
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||     
T  23479176 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtatttaaattatgaaaactgg 23479077  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||||    
T  23479076 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaagtgattgttaaagagtaggtaattcaatgaattaacataag 23478977  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| || ||||||||||||||||||| |||||||||| ||||||    
T  23478976 aattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttaggattt-gggttgatgaaattggggctttaggagtgaaaaatggtct 23478878  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||| |||||||||||  | ||||||||| ||  | |||||||||||||||   ||||||||||||||||||||||||    
T  23478877 gttcccgtagatttgtccgtcgcaactcgctactgcgagtaaacttactcgcttcgcgagctgcactttgacagcatcc 23478799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 16198930 - 16198553
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||||||||  ||||||||| ||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||||||     
T  16198930 agaggagaaccaagagggagagagaccaccgatcatcaatactaaggtaaaagtgggactaactttctctaattctaagtattttcattctgaaaactgg 16198831  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  16198830 atttaacatgatgtaggtggtaattttgatgataagggaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataag 16198731  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  16198730 aattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtct 16198632  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
     |||| |||||||||||    ||||||||||||| | |||| |||||||||||  ||||  ||||||||||||||||||    
T  16198631 attcccgtagatttgtccgccgcaactcgccacagcgagtacacttactcgcctcgcgatttgcactttgacagcatcc 16198553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 19880916 - 19880547
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |    
T  19880916 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaag-attttaattctgaaaactaa 19880818  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  | ||||||||||||||    
T  19880817 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttgttttggaattgattgttaaagagtaggtaattaaatgaattaacataag 19880718  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||| ||||||    
T  19880717 aattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg--------ttgatgaaattggggcttttggagtgaaaactggtct 19880626  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||| |||||||||||  | ||||||||||||| | ||||||||| | ||||  ||||||| ||||||||||||||||    
T  19880625 gttcccgtagatttgtccgtcgcaactcgccacagcgagtaaacttgcacgcctcgcgagcttcactttgacagcatcc 19880547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 26454802 - 26454430
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||| |||  |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  26454802 agaggagaaccaagagggagaaagatcgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactgg 26454703  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaa--attaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacata 200  Q
    |||||||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  26454702 atttaacatgatgtaggtggtaattttgattattagagaaatattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacata 26454603  T
Q  201 agaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggt 300  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||        |||||||||||||||||||||||||||||  ||||    
T  26454602 agaattaaagttcaggctgtagaataaacataggttgagtttcctatcaaatttggg--------ttgatgaaattggggcttttggagtgaaatctggt 26454511  T
Q  301 ctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||||| |||||||||||  | | ||||||||||| | ||||||||| ||||||  ||||||||||||||||||||||||    
T  26454510 ctgttcccgtagatttgtccgtcgtaactcgccacagcgagtaaacttgctcgcctcgcgagctgcactttgacagcatcc 26454430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 44 - 381
Target Start/End: Original strand, 25657513 - 25657849
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 143  Q
    |||| |||||||||||| |||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  25657513 ctaaagtaagggtgggagtaactttctctaattctaagtattttaattctgaaaattggatttaacatgatgtaggtggtaattttgatgattagagaaa 25657612  T
Q  144 ttaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttc 243  Q
    ||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  25657613 ttaggttttggtttgaaattgattgttaaagagtaggtaattcaatgaattaacataagaattgatgttcaggctgtagaataaacataggttgagtttc 25657712  T
Q  244 ctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatagcaactcgccacaacaagta 343  Q
    |||||||||||||||||| || |||||||||||||||||||| ||||||||| ||||||||||  ||| |||||||  | ||||||||||||| | ||||    
T  25657713 ctatcaaatttgggattt-gggttgatgaaattggggcttttagagtgaaaaatggtctgttctcgtaaatttgtccgtcgcaactcgccacagcgagta 25657811  T
Q  344 aacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||||||||||  ||||| ||||||||||||||||||    
T  25657812 aacttactcgcctcgcgagatgcactttgacagcatcc 25657849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 5 - 184
Target Start/End: Original strand, 17158923 - 17159102
Alignment:
Q  5 aggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaat 104  Q
    ||||||| ||| ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||  ||    
T  17158923 aggagaaccaagggggagagagaccaccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattttgaaaactagat 17159022  T
Q  105 ttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaat 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17159023 ttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaat 17159102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 199 - 379
Target Start/End: Original strand, 14397063 - 14397241
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||| ||    
T  14397063 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgg-atttgggtt-gatgaaattggggcttttggagtgaaaactg 14397160  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    ||||||||| |||||||||||| | ||||||||||||| | |||| |||||||||||  ||||||||||||||||||||||    
T  14397161 gtctgttcccgtagatttgtctgtcgcaactcgccacagcgagtacacttactcgcctcgcgagctgcactttgacagcat 14397241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 199 - 381
Target Start/End: Original strand, 8413901 - 8414082
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| |    
T  8413901 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaact 8413998  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||| ||||| |||||| | ||||||||||||| | ||||||||||||||||  ||||||| ||||||||||||||||    
T  8413999 ggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagcttcactttgacagcatcc 8414082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 171 - 257
Target Start/End: Complemental strand, 22483706 - 22483620
Alignment:
Q  171 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||||||||   |||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||  ||||||||    
T  22483706 aaagagtaggtaatctgatgaattaacataagaattgatgttcaggttgtagaataaacataggttgagtttcctattgaatttggg 22483620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 223 - 381
Target Start/End: Complemental strand, 11775598 - 11775441
Alignment:
Q  223 aataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaattggtctgttccggtagatttgtcta 321  Q
    ||||| || ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| ||||||||||| ||||| ||||||     
T  11775598 aataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaactggtctgttcccgtagagttgtctg 11775501  T
Q  322 tagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    | ||||||||||||| | ||||||| ||||||||  ||||||||||||||||||||||||    
T  11775500 tcgcaactcgccacagcgagtaaacgtactcgcctcgcgagctgcactttgacagcatcc 11775441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 130
Target Start/End: Original strand, 20022026 - 20022125
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||||  | ||||||||||||  |||||||||| | ||||||| ||| |||||    
T  20022026 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggttgtagttttg 20022125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 12577958 - 12577901
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaat 75  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  12577958 gggagagagactgctgatcatcaatactaaggtaagggtgggactaactttctctaat 12577901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 160 - 259
Target Start/End: Complemental strand, 20879411 - 20879311
Alignment:
Q  160 aattgattgttaaa-gagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||||||| | |||||||||||| |||||||||||||||||||| ||||||| ||||||||||  | ||||   ||||||| ||||||||||||    
T  20879411 aattgattgttaaaagtgtaggtaatccaatgaattaacataagaattgatgttcaggttgtagaataacaataggtaatgtttcctgtcaaatttggga 20879312  T
Q  259 t 259  Q
    |    
T  20879311 t 20879311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 160 - 245
Target Start/End: Original strand, 22610380 - 22610466
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcct 245  Q
    ||||||||||| ||||||||||||||||| ||||||||| |||| | ||| ||||||  ||||||||||||| ||||||||||||||    
T  22610380 aattgattgttgaaagagtaggtaatccattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagtttcct 22610466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 36727037 - 36727122
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 129  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| || |||||||| | ||||||| ||| ||||    
T  36727037 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattggatttaacaagttgtaggttgtagtttt 36727122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 22254819 - 22254743
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  22254819 ctaaggtaatggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggt 22254743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 45469218 - 45469294
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||  |||||||||| | |||||||    
T  45469218 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaatcgaatttaacaagttgtaggt 45469294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 119
Target Start/End: Original strand, 23899986 - 23900061
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 119  Q
    |||||||||||||| |||||||||||||||||||||||| || ||| ||||| || ||||||||||| | ||||||    
T  23899986 ctaaggtaagggtgtgactaactttctctaattctaagtgatataactctgagaattgaatttaacaagttgtagg 23900061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 4380616 - 4380670
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  4380616 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 4380670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 23884107 - 23884021
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcct 245  Q
    ||||||||||| |||||||||||||  || ||||||||| |||| | ||||||||||  ||||||||||||| ||||||||||||||    
T  23884107 aattgattgttgaaagagtaggtaaatcattgaattaacgtaaggaatgaagttcagattgtagaataaacataggttgagtttcct 23884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 31722492 - 31722578
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||| |||||||||||||||||||||||||||||||||  | ||||| ||||||  |||||||||| | ||||||| ||| |||||    
T  31722492 ctaagataagggtgggactaactttctctaattctaagtggtataattttgaaaatcgaatttaacaagttgtaggttgtagttttg 31722578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 36732598 - 36732700
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||| ||| ||||||||| |||| |  || ||||||  |||||||||| || ||||  |||||||||||||||||||||    
T  36732598 aattgattgttgaaagagtaggtaaaccattgaattaacgtaaggaaggaggttcagattgtagaataatcataggtcaagtttcctatcaaatttggga 36732697  T
Q  259 ttt 261  Q
    |||    
T  36732698 ttt 36732700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 17906848 - 17906923
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||||||||||||||||||||  | | |||||| |||||| |||||||| | |||||||    
T  17906848 ctaaggtaagggtgggactaactttctctaattctaagttgtatgattctg-aaactggatttaacaagttgtaggt 17906923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 3 - 75
Target Start/End: Original strand, 41680091 - 41680163
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||| |||  ||||||||||| |||||||||| |||||||||||| |||||||||||| |||| ||||    
T  41680091 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaaaggtgggactaaccttctttaat 41680163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 5761586 - 5761548
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5761586 ctaaggtaagggtgggactaactttctctaattctaagt 5761548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 22532131 - 22532169
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22532131 ctaaggtaagggtgggactaactttctctaattctaagt 22532169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 22536816 - 22536854
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22536816 ctaaggtaagggtgggactaactttctctaattctaagt 22536854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 6101752 - 6101805
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |||||||||||||||||||||||||||||  | |||||||||||    
T  6101752 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaa 6101805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 17218754 - 17218701
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    |||| |||||||||||||||||||||||| ||||||||| | ||||||||||||    
T  17218754 taagataagggtgggactaactttctctagttctaagtattataattctgaaaa 17218701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 98
Target Start/End: Complemental strand, 18761500 - 18761447
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    ||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  18761500 taaggtaagggtgcgactaactttctctaattctaagtggtataattctgaaaa 18761447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 336
Target Start/End: Complemental strand, 19882843 - 19882711
Alignment:
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| || | |||||||    ||||||| |  || ||| |||||     
T  19882843 aattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggttt-gggtggatgaaaaattggctttttggctggaaactggtcc 19882745  T
Q  303 gttccggtagatttgtctatagcaactcgccaca 336  Q
    ||||| ||||| |||||| | |||||||||||||    
T  19882744 gttcccgtagagttgtctgttgcaactcgccaca 19882711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 20397509 - 20397562
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||| |||||||||||||||||||||  | |||||||||||    
T  20397509 ctaaggtaagggtgggattaactttctctaattctaagttgtataattctgaaa 20397562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 20517172 - 20517269
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  20517172 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 20517269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 19700214 - 19700122
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgatt 136  Q
    |||||||||||||||||||||| |||| |||||||||||  | ||||||| | ||  | |||||||||| ||||||| ||| |||||| ||||    
T  19700214 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctaagaatcggatttaacatgttgtaggttgtagttttgaggatt 19700122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 20083638 - 20083690
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  20083638 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 20083690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 171 - 227
Target Start/End: Original strand, 21676717 - 21676773
Alignment:
Q  171 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  21676717 aaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 21676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 42817907 - 42817959
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||| |||||||||||||||||||  | |||||||||||    
T  42817907 taaggtaagggtgggacttactttctctaattctaagttgtataattctgaaa 42817959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 297 - 380
Target Start/End: Complemental strand, 17796035 - 17795952
Alignment:
Q  297 tggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatc 380  Q
    ||||||||| | ||||| |||| | | ||||||||||||| | ||||||||||||||||  |||||||||||  ||||||||||    
T  17796035 tggtctgtttccgtagagttgtatgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcacagtgacagcatc 17795952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 23419494 - 23419427
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacat 111  Q
    |||||||||||||||||||||| |||| |||||||||||  | ||||||||| || || |||||||||    
T  23419494 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagaattggatttaacat 23419427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 25483594 - 25483653
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||| ||| ||| |||||||||| || ||||| |||||||||||||||||||||    
T  25483594 taagaattgatgtttaggttgtagaataatcataggttaagtttcctatcaaatttggga 25483653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 22317910 - 22317975
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    |||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| |||||||||||    
T  22317910 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaaca 22317975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 23948316 - 23948230
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||||||||| |||||| |||| |||||||||||  | | |||||||||| || |||||||| | ||||||| ||| |||||    
T  23948316 ctaaggtaagggtggtactaaccttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttg 23948230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 3273959 - 3273922
Alignment:
Q  28 ctgccgatcatccatactaaggtaagggtgggactaac 65  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  3273959 ctgccgatcatccattctaaggtaagggtgggactaac 3273922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 22237024 - 22237065
Alignment:
Q  19 ggagagagactgccgatcatccatactaaggtaagggtggga 60  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  22237024 ggagagagaccgccgatcatcaatactaaggtaagggtggga 22237065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 22345059 - 22344966
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaattt 254  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||    
T  22345059 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaattt 22344966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 254
Target Start/End: Complemental strand, 22356719 - 22356626
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaattt 254  Q
    ||||||||| |||| |||||||||||| |||||||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||    
T  22356719 ttgattgttgaaagtgtaggtaatccaatgaattaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaattt 22356626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 39936007 - 39936044
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||| |||||||||||||||||||||    
T  39936007 taaggtaagggtgggattaactttctctaattctaagt 39936044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 19140816 - 19140765
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||| ||||||||||||||||||  | |||||||||||    
T  19140816 taaggtaagggtgggacta-ctttctctaattctaagttgtataattctgaaa 19140765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 37292753 - 37292705
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  37292753 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 37292705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 13660854 - 13660920
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    ||||||||||||||||||||| |||  ||||||| ||| || | |||||||||| |||||||||||||    
T  13660854 taaggtaagggtgggactaaccttcaataattctgagt-atgtgattctgaaaattgaatttaacatg 13660920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 13719497 - 13719563
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    ||||||||||||||||||||| |||  ||||||| ||| || | |||||||||| |||||||||||||    
T  13719497 taaggtaagggtgggactaaccttcaataattctgagt-atgtgattctgaaaattgaatttaacatg 13719563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 75
Target Start/End: Original strand, 22610266 - 22610297
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||||||||||||||||||||||||||    
T  22610266 ctaaggtaagggtgggactaactttctctaat 22610297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 79
Target Start/End: Complemental strand, 34758915 - 34758885
Alignment:
Q  49 gtaagggtgggactaactttctctaattcta 79  Q
    |||||||||||||||||||||||||||||||    
T  34758915 gtaagggtgggactaactttctctaattcta 34758885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 82
Target Start/End: Original strand, 6573060 - 6573093
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||| ||||||||||||||||||||||||    
T  6573060 gtaagggtgagactaactttctctaattctaagt 6573093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 6202824 - 6202776
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| ||||||||||||||||||||| ||  | |||||||||||    
T  6202824 gtaagggtgagactaactttctctaattctacgttgtataattctgaaa 6202776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 22208335 - 22208291
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||    
T  22208335 ccgatcatctaatctaaggtaagggtgggactagctttctctaat 22208291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 22583659 - 22583726
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    ||||||||||||||||| |||| |||| |||||||| ||  | |||||||| ||| |||||||||||||    
T  22583659 ctaaggtaagggtgggattaacattctttaattctaggttgtataattctg-aaattgaatttaacatg 22583726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Complemental strand, 23889852 - 23889785
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    ||||| |||||||| || |||||||||||||||||| ||  | |||||||| ||| |||||||||||||    
T  23889852 ctaagctaagggtgagattaactttctctaattctaggttgtataattctg-aaattgaatttaacatg 23889785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 257; Significance: 1e-143; HSPs: 2)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 3 - 319
Target Start/End: Complemental strand, 21191 - 20876
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  21191 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactgg 21092  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  21091 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataag 20992  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  20991 aattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtct 20893  T
Q  303 gttccggtagatttgtc 319  Q
    ||||| |||||||||||    
T  20892 gttcccgtagatttgtc 20876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 34206 - 33830
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  34206 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactgg 34107  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||||    
T  34106 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaacagtaggtaattcaatgaattaacataag 34007  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    ||||||||||||| | |||||||||||| ||||||||||||||| |||||||| ||||| || |||||||||||||||||||||||||||||| ||||||    
T  34006 aattgaagttcagaccgtagaataaacataggttgagtttccta-caaatttgagattt-gggttgatgaaattggggcttttggagtgaaaactggtct 33909  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||  ||||||||||  | |||||| |||||| | ||||||||||||||||  |||||||||||||||||| |||||    
T  33908 gttcccatagatttgtccgtcgcaactagccacagcgagtaaacttactcgccgcgcgagctgcactttgacaccatcc 33830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 255; Significance: 1e-142; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 3 - 381
Target Start/End: Original strand, 15173411 - 15173788
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||     
T  15173411 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaatggtgggactaactttctctaattctaagtattttaattctgaaaactgg 15173510  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||    
T  15173511 atttaatgtgatgtaggtggtaattttgatgattaaagaaattaggttttggtttggaattgattgttaaagaataggtaattcaatgaattaacataag 15173610  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||    
T  15173611 aattgaagttcagcctgtaggataaacataggttgagtttcctatcaaatttgggattt-ggattgatgaaattggggcttttggagtgaaaactagtct 15173709  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||| |||||||||||  | ||||||||||||| | |||||||| |||||||  ||||||||||||||||||||||||    
T  15173710 gttcccgtagatttgtccgtcgcaactcgccacagcgagtaaactaactcgcctcgcgagctgcactttgacagcatcc 15173788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 3 - 355
Target Start/End: Original strand, 15900612 - 15900963
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| ||||||| || ||||||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||     
T  15900612 agaggagaaccaagagggagagagaccgccgatcttcaatactaaggtaagggtgagaccaactttctctaattctaagtattttaattctgaaaactgg 15900711  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  15900712 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataag 15900811  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||    
T  15900812 aattgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtct 15900910  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgcc 355  Q
    ||||| |||||||||||  | ||||||||||||| | |||| |||||||||||    
T  15900911 gttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcc 15900963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 105 - 355
Target Start/End: Original strand, 15891629 - 15891878
Alignment:
Q  105 ttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaa 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  15891629 ttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaa 15891728  T
Q  205 ttgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgt 304  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||    
T  15891729 ttgaagttcaggctgtaaaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtgaaaactggtctgt 15891827  T
Q  305 tccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgcc 355  Q
    ||| |||||||||||  | ||||||||||||| | |||| |||||||||||    
T  15891828 tcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcc 15891878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 199 - 379
Target Start/End: Complemental strand, 23415804 - 23415625
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| || ||    
T  23415804 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtgacaactg 23415706  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    ||||||||| |||||||| ||  | |||| |||||| | | |||| |||||||||||  ||||||||||||||||||||||    
T  23415705 gtctgttcccgtagatttttccgtcgcaattcgccatagcgagtacacttactcgcctcgcgagctgcactttgacagcat 23415625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 203 - 379
Target Start/End: Complemental strand, 27557558 - 27557383
Alignment:
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||  ||  |||||||||||||||||||||||||||||||||||    
T  27557558 aattgaagttcaggttgtagaataaacataggttgagttttctatcaaatttgggatttgagtc-gatgaaattggggcttttggagtgaaaattggtct 27557460  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    ||||| |||||||||||  | ||||||||||||| | |||| ||||| |||||  ||||||||||||||||||||||    
T  27557459 gttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttaatcgcctcgcgagctgcactttgacagcat 27557383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 381
Target Start/End: Complemental strand, 23956762 - 23956581
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| |    
T  23956762 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaact 23956665  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||| ||||| |||||| | ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||    
T  23956664 ggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 23956581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 160 - 313
Target Start/End: Complemental strand, 29045202 - 29045049
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||| ||||||| |||||||||| || |||| |||||| |||||||||||||||    
T  29045202 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattgatgttcaggttgtagaataatcataggtagagttttctatcaaatttggga 29045103  T
Q  259 tttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtaga 313  Q
    ||| |  ||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  29045102 ttt-gagttgatgaaattggggctattggagtgaaaactggtctgttcccgtaga 29045049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 27329954 - 27330055
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    ||||||||||| |||||||||| ||||||||||||| ||| ||||||||||||||||||||| ||  | |||||||| ||| ||| ||||||||| ||||    
T  27329954 gggagagagaccgccgatcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctg-aaattgagtttaacatgttgta 27330052  T
Q  118 ggt 120  Q
    |||    
T  27330053 ggt 27330055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 27390694 - 27390795
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    ||||||||||| |||||||||| ||||||||||||| ||| ||||||||||||||||||||| ||  | |||||||| ||| ||| ||||||||| ||||    
T  27390694 gggagagagaccgccgatcatcaatactaaggtaagagtgtgactaactttctctaattctaggttgtataattctg-aaattgagtttaacatgttgta 27390792  T
Q  118 ggt 120  Q
    |||    
T  27390793 ggt 27390795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 199 - 368
Target Start/End: Original strand, 28288659 - 28288827
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  28288659 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 28288756  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    |||||||||| ||||  ||||   | ||||||||||||| | ||||||||||||||||  |||||||||||    
T  28288757 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcac 28288827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 18928734 - 18928658
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||| |||||||||||||||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  18928734 ctaaggtaagggtaggactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggt 18928658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 15890711 - 15890796
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| ||||||| ||| |||||    
T  15890711 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggttgtagttttg 15890796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 31731903 - 31732009
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 143  Q
    |||||||||||||||||||||||||||| ||||||||||  | |||||||||||| || |||| ||| | ||||||| ||| |||||  |||| ||| ||    
T  31731903 ctaaggtaagggtgggactaactttctccaattctaagtgttataattctgaaaattggatttgacaagttgtaggttgtagttttggggatttgag-aa 31732001  T
Q  144 ttaggttt 151  Q
    ||||||||    
T  31732002 ttaggttt 31732009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 245
Target Start/End: Complemental strand, 1818890 - 1818804
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcct 245  Q
    ||||||||||| |||||||||||||| || ||||||||| |||| | ||| ||||||  ||||||||||||| ||||||||||||||    
T  1818890 aattgattgttgaaagagtaggtaattcattgaattaacgtaaggaatgaggttcagattgtagaataaacataggttgagtttcct 1818804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 368
Target Start/End: Complemental strand, 12943029 - 12942861
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||| | |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  12943029 taagaatcgatgttcagattgtagaataaatataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 12942932  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    |||||||||| ||||  ||||   | |||||||||||||   ||||||||||||||||  |||||||||||    
T  12942931 ggtctgttcccgtagggttgttcgtcgcaactcgccacagtgagtaaacttactcgcctcgcgagctgcac 12942861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 27852300 - 27852193
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| || ||||||| ||||||||||||||||||||||||| |||  | ||||||||| || | |||||||| | |||    
T  27852300 agaggagaaccaagagggagagagaccgctgatcatcaatactaaggtaagggtgggactaaccttcaatcattctaagt-atgtgattctgaaga-tga 27852203  T
Q  103 atttaacatg 112  Q
    ||||||||||    
T  27852202 atttaacatg 27852193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 7828024 - 7827972
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  7828024 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 7827972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 12041619 - 12041687
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    |||||||||||||||||||||| |||| |||||||||||  | |||||||||||| || ||||||||||    
T  12041619 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgaaaattggatttaacatg 12041687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 23150287 - 23150339
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  23150287 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 23150339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 19655231 - 19655305
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  19655231 taaggtaagggtgagactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 19655305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 46 - 97
Target Start/End: Complemental strand, 24267900 - 24267849
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  24267900 aaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24267849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 297 - 380
Target Start/End: Complemental strand, 25807935 - 25807852
Alignment:
Q  297 tggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatc 380  Q
    ||||||||||| ||||| |||||| | ||||||||||||| | ||||||||||||||||  ||||| |||||  ||||||||||    
T  25807935 tggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagatgcacagtgacagcatc 25807852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 27572122 - 27572188
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||| ||| |||||||||||||    
T  27572122 taaggtaagggtgagactaactttctctaattctaagtcgtataattctg-aaattgaatttaacatg 27572188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 13765246 - 13765188
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  13765246 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 13765188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 15998942 - 15998888
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  15998942 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa 15998888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 19772667 - 19772741
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  19772667 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 19772741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 28103421 - 28103467
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaa 64  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  28103421 gggagagagaccgccgatcatcaatactaaggtaagggtgggactaa 28103467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 257
Target Start/End: Original strand, 31021874 - 31021932
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  31021874 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 31021932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 130
Target Start/End: Complemental strand, 19401146 - 19401062
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  19401146 taaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttg 19401062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 129
Target Start/End: Complemental strand, 23501725 - 23501641
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaatttt 129  Q
    |||||||||||||| ||||||| |||  ||||||||| |  |||||||||||||||||||||||||| | ||||||| ||| ||||    
T  23501725 ctaaggtaagggtgagactaaccttcaataattctaaatg-tttaattctgaaaactgaatttaacaagttgtaggttgtagtttt 23501641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 18703620 - 18703568
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  18703620 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaa 18703568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 18709555 - 18709503
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  18709555 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaa 18709503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 232 - 379
Target Start/End: Original strand, 19825674 - 19825820
Alignment:
Q  232 aggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaattggtctgttccggtagatttgtctatagcaactc 330  Q
    ||||| |||||||||||||||||||  |||||||  |||||||  | ||| ||||||  |||||| ||||||||||| ||| | ||||||   |||||||    
T  19825674 aggttaagtttcctatcaaatttggagtttaggtg-gatgaaaaattgggtttttggc-tgaaaactggtctgttcccgtatagttgtctgccgcaactc 19825771  T
Q  331 gccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    |||||| | | ||||||||||||||  |||||||||||  |||||||||    
T  19825772 gccacagcgattaaacttactcgcctcgcgagctgcacagtgacagcat 19825820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 23226010 - 23226066
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttg 255  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||    
T  23226010 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttg 23226066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 18585615 - 18585549
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| |||| ||| ||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  18585615 ttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 18585549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 82
Target Start/End: Complemental strand, 18585854 - 18585820
Alignment:
Q  48 ggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||    
T  18585854 ggtaagggtgggactaactttctctaattctaagt 18585820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 20733202 - 20733264
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaac 65  Q
    ||||||||| |||  ||||||||||| || ||||||| ||||||||||||||||| |||||||    
T  20733202 agaggagaaccaagagggagagagaccgctgatcatcaatactaaggtaagggtgagactaac 20733264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 22806790 - 22806716
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| |  |||||||||| |||||||    
T  22806790 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattatatttaacatgttgtaggt 22806716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 28948628 - 28948590
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  28948628 ctaaggtaagggtgagactaactttctctaattctaagt 28948590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 27125477 - 27125514
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  27125477 taaggtaagggtgagactaactttctctaattctaagt 27125514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 20556185 - 20556244
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  20556185 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 20556244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 26923659 - 26923733
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||||||||||| |||  ||||  ||||| ||| | ||||||||| ||||||||||||| |||||||    
T  26923659 taaggtaagggtgggactaacattcaataatcttaagtcattga-ttctgaaaattgaatttaacatgttgtaggt 26923733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 261
Target Start/End: Complemental strand, 10446134 - 10446048
Alignment:
Q  175 agtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||  || ||||||||| |||| | ||| ||||||  | ||||||||||| |||||||||||||| |  ||||||||||||    
T  10446134 agtaggtaaagcattgaattaacgtaaggaatgaggttcagattatagaataaacataggttgagtttccttttgaatttgggattt 10446048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 15704565 - 15704639
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||| | |||  |||||||||||  ||| |||| ||||| || |||||||||| |||||||    
T  15704565 aaggtaagggtgggactagccttcaataattctaagtgttttcattccgaaaattgtatttaacatgttgtaggt 15704639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 79
Target Start/End: Complemental strand, 29625231 - 29625201
Alignment:
Q  49 gtaagggtgggactaactttctctaattcta 79  Q
    |||||||||||||||||||||||||||||||    
T  29625231 gtaagggtgggactaactttctctaattcta 29625201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 76
Target Start/End: Original strand, 30673401 - 30673433
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaatt 76  Q
    ||||||||||||||||| |||||||||||||||    
T  30673401 ctaaggtaagggtgggattaactttctctaatt 30673433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462 (Bit Score: 254; Significance: 1e-141; HSPs: 3)
Name: scaffold0462
Description:

Target: scaffold0462; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 3 - 380
Target Start/End: Complemental strand, 11317 - 10941
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||||||||||||| | ||||||||||||||||| ||||| ||||||||||||||||      
T  11317 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgagtctaactttctctaattccaagtattttaattctgaaaactag 11218  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  11217 atttaacataatgtaggtggtaattttgatgattagagaaattaggttttgatttggaattgattgttaaagagtaggtaattcaatgaattaacataag 11118  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  11117 aattgaagttcaggctgtagaataaacatatcttgagtttcctatcaaatttgggattttgg-ttgatgaaattggggcttttggagtgaaaattggtct 11019  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatc 380  Q
    ||||| |||||||||||  | ||||||||||||| | ||||||||||||||||  ||||||| |||||| ||||||||    
T  11018 gttcccgtagatttgtccgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagcttcacttttacagcatc 10941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 1156 - 1073
Alignment:
Q  211 ttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaa 295  Q
    |||||| |||||||||| || |  || ||||||||||||||||| |||||| || | ||||||||| ||| |||||| |||||||    
T  1156 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggattt-gggtagatgaaatttgggattttggggtgaaaa 1073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0462; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 211 - 295
Target Start/End: Complemental strand, 6662 - 6579
Alignment:
Q  211 ttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaa 295  Q
    |||||| |||||||||| || |  || ||||||||||||||||| |||||| || | ||||||||| ||| |||||| |||||||    
T  6662 ttcaggttgtagaataatcatatattaagtttcctatcaaattttggattt-gggtagatgaaatttgggattttggggtgaaaa 6579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 87)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 3 - 381
Target Start/End: Original strand, 16549963 - 16550337
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||     
T  16549963 agaggagaaccaagagggagagagactgccgatcatcaatactaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaaactgg 16550062  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  16550063 atttaacatgatgtaggtggtaattttgat---tagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataag 16550159  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || |||||||||||||||||||||||  ||||| |||| |    
T  16550160 aattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggattt-gggttgatgaaattggggcttttggaaagaaaactggtat 16550258  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||  |||||||| | || ||||||||||||| | ||||||||||||||||  |||| |||||||||||||||||||    
T  16550259 gttcccatagatttgcccatcgcaactcgccacagcgagtaaacttactcgcctcgcgatctgcactttgacagcatcc 16550337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 3 - 381
Target Start/End: Complemental strand, 16615699 - 16615325
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||     
T  16615699 agaggagaaccaagagggagagagactgccgatcatcaatactaaggtaaggttgggactaactttctctaattctaagtattttaattctgaaaactgg 16615600  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    ||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  16615599 atttaacatgatgtaggtggtaattttgat---tagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataag 16615503  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||| || |||||||||||||||||||||||  ||||| |||| |    
T  16615502 aattgaagttcaggctgtagaataaacataggttgagttttctatcaaatttgggattt-gggttgatgaaattggggcttttggaaagaaaactggtat 16615404  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||  |||||||| | || ||||||||||||| | ||||||||||||||||  |||| |||||||||||||||||||    
T  16615403 gttcccatagatttgcccatcgcaactcgccacagcgagtaaacttactcgcctcgcgatctgcactttgacagcatcc 16615325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 44 - 381
Target Start/End: Original strand, 32160199 - 32160535
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 143  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  32160199 ctaaggtaagggtaagactaactttctctaattctaagtaatttaattctgaaaactggatttaacatgatgtaggtgataattttgatgattagagaaa 32160298  T
Q  144 ttaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttc 243  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  32160299 ttaggttttggtttggaattgattgttaaagagtaggtaatccaatgaattaacataagaattgaagttcaggctgtagaataaacataggttgagtttc 32160398  T
Q  244 ctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatagcaactcgccacaacaagta 343  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||||| |||| ||||   |||||||| ||  | ||||||||||||| | ||||    
T  32160399 ctatcaaatttgagattt-ggattgatgaaattggggcttttggagtgaaaactggtttgtttgcgtagatttttccgtcgcaactcgccacagcgagta 32160497  T
Q  344 aacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  32160498 aacttactcgccccgcgagctgcactttgacagcatcc 32160535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 18 - 333
Target Start/End: Original strand, 29052155 - 29052462
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    |||||||| || | |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||    
T  29052155 gggagagaaaccgtcgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactggatttaacatgatgta 29052254  T
Q  118 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggc 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||    
T  29052255 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaattaattaacataagaattgaagttcaggc 29052354  T
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttg 317  Q
    ||||||||||||| ||||||||||||||||||||||||||        |||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  29052355 tgtagaataaacataggttgagtttcctatcaaatttggg--------ttgatgaaattgggacttttggagtgaaaactggtctgttcccgtagatttg 29052446  T
Q  318 tctatagcaactcgcc 333  Q
    ||  | ||||||||||    
T  29052447 tccgtcgcaactcgcc 29052462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 199 - 379
Target Start/End: Original strand, 1856553 - 1856731
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| ||    
T  1856553 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtaaaaactg 1856651  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
     |||||||| |||||||||||| | ||||||||||||| | |||| |||||||||||  ||||||| ||||||||||||||    
T  1856652 atctgttcccgtagatttgtctgtcgcaactcgccacagcgagtacacttactcgcctcgcgagct-cactttgacagcat 1856731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 199 - 379
Target Start/End: Original strand, 13917725 - 13917904
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||| ||    
T  13917725 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggatctgggtt-gatgaaattggggcttttggagtgaaaactg 13917823  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    ||||||||| |||||||||||  | ||||||||||||| | |||| ||| |||||||  ||||||| ||||||||||||||    
T  13917824 gtctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacactcactcgcctcgcgagcttcactttgacagcat 13917904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 199 - 379
Target Start/End: Original strand, 25926452 - 25926631
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||| |||| |||||||||||||| ||||||||||||| ||    
T  25926452 taagaattgaagttcaggctgtagaataaacataggttcagtttcctataaaatttgggatttgggtt-gatgaaattggggcatttggagtgaaaactg 25926550  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    ||||||||| |||||||||||  | ||||||||||||| | |||| |||||||||||  |||| |||||||||||||||||    
T  25926551 gtctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgcctcgcgatctgcactttgacagcat 25926631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 160 - 306
Target Start/End: Original strand, 13315195 - 13315341
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||| ||| ||||||||   || |||||  ||||||| |||||||||| || |||| |||||| |||||||||||||||    
T  13315195 aattgattgttgaaagagtaggtaacccaatgaattaaggaaataattggtgttcaggttgtagaataatcataggtagagttttctatcaaatttggga 13315294  T
Q  259 tttaggtttgatgaaattggggcttttggagtgaaaattggtctgttc 306  Q
    ||| || ||||||||||||||| |||||||||||||| ||||||||||    
T  13315295 ttt-gggttgatgaaattggggtttttggagtgaaaactggtctgttc 13315341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 160 - 313
Target Start/End: Complemental strand, 19282984 - 19282831
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||   |||||| |||||||||| || |||| |||||| ||||||||||||| |    
T  19282984 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtcttcaggttgtagaataatcataggtagagttttctatcaaatttggaa 19282885  T
Q  259 tttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtaga 313  Q
    ||| || ||||||||||||||||||||||||||||||||| |||||||| |||||    
T  19282884 ttt-ggattgatgaaattggggcttttggagtgaaaattgatctgttcccgtaga 19282831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 368
Target Start/End: Original strand, 16108011 - 16108179
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  16108011 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 16108108  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcac 368  Q
    |||||||||| ||||| ||||   | ||||||||||||| | ||||||||||||||||  |||||||||||    
T  16108109 ggtctgttcccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcac 16108179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 35771440 - 35771526
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||||||  |||||||||| | ||||||| ||| |||||    
T  35771440 ctaaggtaagggtgggactaactttctctaattctaagtgatataattctgaaaatcgaatttaacaagttgtaggttgtagttttg 35771526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 162 - 258
Target Start/End: Complemental strand, 14274159 - 14274062
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||| ||||||| |||||||||| || ||||| ||||||||| |||||||||||    
T  14274159 ttgattgttgaaagtgtaggtaatccaatgaattaacatatgaattgatgttcaggttgtagaataatcataggttaagtttcctaacaaatttggga 14274062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 4071873 - 4071767
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 143  Q
    ||||||||||||||||||||||||||||||||||||||| || ||| |||||||| || |||||||| | ||||||| ||| |||||  |||| ||| ||    
T  4071873 ctaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaattggatttaacaagttgtaggttgtagttttggggatttgag-aa 4071775  T
Q  144 ttaggttt 151  Q
    ||||||||    
T  4071774 ttaggttt 4071767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 14218894 - 14218981
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttga 131  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||| ||||||||||| | ||||||| ||| ||||||    
T  14218894 ctaaggtaagggtgagactaactttctctaattctaagtggtataattctgaaaattgaatttaacaagttgtaggttgtagttttga 14218981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 15289158 - 15289052
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 143  Q
    |||||||||||||||||| ||||||||||||||||||||| | ||| |||||||| || |||||||| | ||||||| ||| |||||| |||| ||| ||    
T  15289158 ctaaggtaagggtgggaccaactttctctaattctaagtattataactctgaaaattggatttaacaagttgtaggttgtagttttgaggatttgag-aa 15289060  T
Q  144 ttaggttt 151  Q
    ||||||||    
T  15289059 ttaggttt 15289052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 162 - 295
Target Start/End: Original strand, 12754781 - 12754914
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  12754781 ttgattgttgaaagagtaggtaatctgatgaattaaagtaataattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 12754880  T
Q  261 taggtttgatgaaattggggcttttggagtgaaaa 295  Q
    | || | ||||||||| ||| |||| |||| ||||    
T  12754881 t-gggtagatgaaatttgggttttttgagtaaaaa 12754914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 13147458 - 13147524
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| | | |||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  13147458 ccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagttatataattctgaaa 13147524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 48807324 - 48807390
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    |||||||||||||||||||||||||||||||||||||||  | ||||||||||||  ||||||||||    
T  48807324 ctaaggtaagggtgggactaactttctctaattctaagtggtataattctgaaaatcgaatttaaca 48807390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 379
Target Start/End: Complemental strand, 11662005 - 11661826
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    |||||||||| ||||||| |||||| |||  | ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||   |||| |     
T  11662005 taagaattgatgttcaggttgtagactaattataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggctagaaact- 11661908  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    |||||||||| ||||| |||||| | ||||||||||||| | ||||||||||||||||  ||||||||| |  |||||||||    
T  11661907 ggtctgttcccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagctgcccagtgacagcat 11661826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 12127149 - 12127237
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  12127149 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 12127237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 199 - 379
Target Start/End: Original strand, 14188446 - 14188625
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    |||||||||| ||||| | |||||||||| || ||||| |||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  || ||| |    
T  14188446 taagaattgatgttcaagttgtagaataatcataggttaagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctggaaact 14188543  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    |||||||||| ||||| ||  || | ||||||||||||| | | |||||||||||||| |||||||||| |  |||||||||    
T  14188544 ggtctgttcccgtagagtttcctgtcgcaactcgccacagcgattaaacttactcgccttgcgagctgcccagtgacagcat 14188625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 30820124 - 30820234
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||||| |||  ||||||| ||| || |||||||| |||||| |||||||| | ||||    
T  30820124 gggagagagaccgccgatcatcaatactaaggtgagggtgggactaaccttcagtaattctgagt-atgtaattctg-aaactggatttaacaggttgta 30820221  T
Q  118 ggtggtaattttg 130  Q
    ||| ||| |||||    
T  30820222 ggttgtagttttg 30820234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 14105580 - 14105678
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| || ||||||||||| ||  |||| | ||||||||||    
T  14105580 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggttt-gggttgatgaaatttggtttttttgggtgaaaattg 14105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 199 - 298
Target Start/End: Original strand, 14415597 - 14415695
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||| || ||||||||||| ||  |||| | ||||||||||    
T  14415597 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggggttt-gggttgatgaaatttggtttttttgggtgaaaattg 14415695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 4325995 - 4325933
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||||||    
T  4325995 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggattt 4325933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 110
Target Start/End: Original strand, 12754611 - 12754676
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||| |||||| ||||||||    
T  12754611 ctaaggtaagggtgggactaactttctctaattctaagttatatgattctg-aaactggatttaaca 12754676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 19485931 - 19485993
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaac 65  Q
    ||||||||| |||  ||||||||||| |||||||||| |||||||||||||||||||||||||    
T  19485931 agaggagaaccaagagggagagagaccgccgatcatcaatactaaggtaagggtgggactaac 19485993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 364
Target Start/End: Original strand, 23664275 - 23664439
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  23664275 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 23664372  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagct 364  Q
    |||||||||| ||||  ||||   | ||||||||||||| | ||||||| ||||||||  |||||||    
T  23664373 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacgtactcgcctcgcgagct 23664439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 16078382 - 16078317
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    ||||||||||||||||||||||||||||||||||||||  | ||||| ||||||  ||||||||||    
T  16078382 taaggtaagggtgggactaactttctctaattctaagtggtataattatgaaaatcgaatttaaca 16078317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 20586405 - 20586352
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  20586405 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 20586352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 8851159 - 8851211
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  8851159 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 8851211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 12372326 - 12372274
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  12372326 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12372274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 12465260 - 12465312
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  12465260 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 12465312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 14928290 - 14928362
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 118  Q
    |||||||||||||||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||    
T  14928290 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 14928362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 46 - 118
Target Start/End: Original strand, 15351756 - 15351828
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 118  Q
    |||||||||||||||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||    
T  15351756 aaggtaagggtgggactaaccttcagtaattctaagttctttaattctgaaaattgtatttaacatgttgtag 15351828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 11054767 - 11054681
Alignment:
Q  43 actaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||||||||||||||||| |||  | |||||||||  ||| |||||||||| ||||||||||| | ||||||| |||||||||    
T  11054767 actaaggtaagggtgggactaaccttcaatgattctaagtg-tttgattctgaaaattgaatttaacaggttgtaggttgtaattttg 11054681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 29797431 - 29797286
Alignment:
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaattggtctgttccggtagattt 316  Q
    ||||||||||||| | |||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| ||||||||||| ||||  ||    
T  29797431 tgtagaataaacatatgttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaactggtctgttcccgtagggtt 29797334  T
Q  317 gtctatagcaactcgccacaacaagtaaacttactcgccctgcgagct 364  Q
    ||   | ||||||||||||| | ||||||||||||||||  |||||||    
T  29797333 gttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagct 29797286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 218 - 364
Target Start/End: Complemental strand, 29801250 - 29801105
Alignment:
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaattggtctgttccggtagattt 316  Q
    ||||||||||||| | |||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| ||||||||||| ||||  ||    
T  29801250 tgtagaataaacatatgttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaactggtctgttcccgtagggtt 29801153  T
Q  317 gtctatagcaactcgccacaacaagtaaacttactcgccctgcgagct 364  Q
    ||   | ||||||||||||| | ||||||||||||||||  |||||||    
T  29801152 gttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagct 29801105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 4690662 - 4690716
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    ||||||||| |||||||||||||||||||||||||||||  | ||||||||||||    
T  4690662 ctaaggtaaaggtgggactaactttctctaattctaagttgtataattctgaaaa 4690716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 364
Target Start/End: Complemental strand, 11304087 - 11303923
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||  ||||||||||||| |||||||||||||||||||||||||  ||| || | |||| ||| | ||| ||||||  |||||| |    
T  11304087 taagaatcgatgttcagattgtagaataaacataggttgagtttcctatcaaatttggtgttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 11303990  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagct 364  Q
    |||||||||| ||||  ||||   | ||||||||||||| | ||||||| ||||||||  |||||||    
T  11303989 ggtctgttcccgtagggttgttcgtcgcaactcgccacagcgagtaaacatactcgcctcgcgagct 11303923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 265
Target Start/End: Complemental strand, 13648181 - 13648115
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggt 265  Q
    |||||||||| ||| ||| |||||||||| || ||||| | ||||||||||||||||||||||||||    
T  13648181 taagaattgatgtttaggttgtagaataatcataggttaaatttcctatcaaatttgggatttaggt 13648115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 15095636 - 15095721
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  15095636 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttg 15095721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 44190369 - 44190431
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||| ||||||||    
T  44190369 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatgtgggattt 44190431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 11067520 - 11067468
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  11067520 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 11067468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 12322930 - 12322982
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||| |||||||||||||||||||||||  | |||||||||||    
T  12322930 taaggtaagggtggaactaactttctctaattctaagttgtataattctgaaa 12322982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 14259445 - 14259373
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtag 118  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||    
T  14259445 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtag 14259373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 20620338 - 20620286
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| ||||||||||||||||||||||||||||  | |||||||||||    
T  20620338 taaggtaagtgtgggactaactttctctaattctaagttgtataattctgaaa 20620286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 32433589 - 32433641
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  32433589 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 32433641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 171 - 245
Target Start/End: Original strand, 36300766 - 36300841
Alignment:
Q  171 aaagagtaggtaatccagtgaattaacataagaattgaagttcag-gctgtagaataaacagaggttgagtttcct 245  Q
    ||||||||||||||||| ||||||||| |||| | ||| ||||||   ||||||||||||| ||||||||||||||    
T  36300766 aaagagtaggtaatccattgaattaacgtaaggagtgaggttcagaattgtagaataaacataggttgagtttcct 36300841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 13698637 - 13698723
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||||||| ||||||||||||| ||||| |||||   ||||||||||||| || |||| ||||| | ||||| ||| |||||    
T  13698637 ctaaggtaagggtaggactaactttctttaattttaagttgattaattctgaaaattggatttgacatgttttaggttgtagttttg 13698723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 16462968 - 16462910
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| ||||||| |||||||||| || || || ||||||||||||||||||||    
T  16462968 taagaattgatgttcaggttgtagaataatcatagattaagtttcctatcaaatttggg 16462910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 18955383 - 18955329
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    ||||||||| |||| ||||||||||||||||||||||||  | ||||||||||||    
T  18955383 ctaaggtaaaggtgagactaactttctctaattctaagtgttataattctgaaaa 18955329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 38295540 - 38295438
Alignment:
Q  160 aattgattgtta-aagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||||  |||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| |||||||||||  |||||||||    
T  38295540 aattgattgttgcaagagtaggtaatccgatgaagtaaggtaataattggtgttcaggatgtagaataatcataggtagagtttcctattgaatttggga 38295441  T
Q  259 ttt 261  Q
    |||    
T  38295440 ttt 38295438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 255
Target Start/End: Original strand, 42565948 - 42566042
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttg 255  Q
    ||||||||| |||| ||| |||||||| ||||||||||||  |||||| ||||||| ||||||||||  | ||||   |||||||||||||||||    
T  42565948 ttgattgttgaaagtgtacgtaatccaatgaattaacatagaaattgatgttcaggttgtagaataacaataggtaatgtttcctatcaaatttg 42566042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 44374909 - 44374843
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |  |||||||||||||| || |||||||||||||||||||||  | |||||||||||    
T  44374909 ccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaa 44374843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 44383774 - 44383708
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |  |||||||||||||| || |||||||||||||||||||||  | |||||||||||    
T  44383774 ccgatcatctaatctaaggtaagggtgagagtaactttctctaattctaagttgtataattctgaaa 44383708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 46579732 - 46579774
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtggga 60  Q
    ||||||||||| |||||||||| ||||||||||||||||||||    
T  46579732 gggagagagaccgccgatcatcaatactaaggtaagggtggga 46579774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 47974819 - 47974857
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  47974819 ctaaggtaagggtgagactaactttctctaattctaagt 47974857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 14180397 - 14180450
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||| |||||| |||||||||||||||||  | |||||||||||    
T  14180397 ctaaggtaagggtgtgactaattttctctaattctaagttgtataattctgaaa 14180450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Original strand, 17505117 - 17505174
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 256  Q
    |||||||||| |||||||  ||||||||| || ||||| |||||||||||||||||||    
T  17505117 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 17505174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 256
Target Start/End: Complemental strand, 17548097 - 17548040
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgg 256  Q
    |||||||||| |||||||  ||||||||| || ||||| |||||||||||||||||||    
T  17548097 taagaattgatgttcaggtggtagaataatcataggttaagtttcctatcaaatttgg 17548040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 19195071 - 19194995
Alignment:
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaa 295  Q
    |||||||||| || ||||| |||||||||||||||||||||||| || | ||||||||| ||| |||| | |||||||    
T  19195071 tgtagaataatcataggttaagtttcctatcaaatttgggattt-gggtagatgaaatttgggttttttgggtgaaaa 19194995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 20214200 - 20214147
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||||||| |||||| |||  | |||||||||||    
T  20214200 ctaaggtaagggtgggactaactttctcaaattctgagttgtataattctgaaa 20214147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 24269946 - 24269999
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||| ||||||||||||||| |||||  | |||||||||||    
T  24269946 ctaaggtaagggtgggattaactttctctaattttaagttgtataattctgaaa 24269999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 82
Target Start/End: Complemental strand, 33002205 - 33002168
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||| |||||||||||||||||||||||||    
T  33002205 taaggtaagggtcggactaactttctctaattctaagt 33002168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 36685106 - 36685229
Alignment:
Q  5 aggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaat 104  Q
    ||||||| |||  ||||||||||| |  ||||||| |||||||||||||||||| || ||| |||  ||||||| ||| || |||||||| |||||| ||    
T  36685106 aggagaaccaagagggagagagaccgttgatcatcaatactaaggtaagggtggaaccaaccttcaataattctgagt-atgtaattctg-aaactggat 36685203  T
Q  105 ttaacatgatgtaggtggtaattttg 130  Q
    |||||| | ||||||| ||| |||||    
T  36685204 ttaacaggttgtaggttgtagttttg 36685229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 46386087 - 46386140
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||| ||||||| |||||||||||||||||||||||||  | |||||||||||    
T  46386087 ctaagataagggtaggactaactttctctaattctaagttgtataattctgaaa 46386140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 10277375 - 10277327
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||| ||  | |||||||||||    
T  10277375 gtaagggtgggactaactttctctaattctacgttgtataattctgaaa 10277327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 18570584 - 18570481
Alignment:
Q  159 gaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggct-gtagaataaacagaggttgagtttcctatcaaatttgg 256  Q
    |||||||||||| ||||||||||||| ||| ||||||||| |||| | ||| ||||||  | |||||||||||| ||||||| |||||| |  |||||||    
T  18570584 gaattgattgttgaaagagtaggtaa-ccattgaattaacgtaaggaatgaggttcagaattgtagaataaacataggttgaatttcctcttgaatttgg 18570486  T
Q  257 gattt 261  Q
    |||||    
T  18570485 gattt 18570481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 261
Target Start/End: Original strand, 47975007 - 47975107
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| ||||| ||||||||||  ||||||||  ||| |||||  ||||||| |||||||||| || || || ||||| ||||||||||||| |||    
T  47975007 ttgattgttgaaagattaggtaatccgatgaattaaggtaataattggtgttcaggttgtagaataatcatagattaagttttctatcaaatttggaatt 47975106  T
Q  261 t 261  Q
    |    
T  47975107 t 47975107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 75
Target Start/End: Original strand, 8488093 - 8488124
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||||||||||||||||||||||||||    
T  8488093 ctaaggtaagggtgggactaactttctctaat 8488124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 75
Target Start/End: Original strand, 8513752 - 8513783
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||||||||||||||||||||||||||    
T  8513752 ctaaggtaagggtgggactaactttctctaat 8513783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 13256592 - 13256525
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtt 266  Q
    |||||||||| ||||| | ||||| |||| || ||| | |||||||||||||||||||||||| ||||    
T  13256592 taagaattgatgttcaagttgtaggataatcataggataagtttcctatcaaatttgggatttgggtt 13256525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 44 - 75
Target Start/End: Original strand, 16250221 - 16250252
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||||||||||||||||||||||||||    
T  16250221 ctaaggtaagggtgggactaactttctctaat 16250252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 32302278 - 32302203
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctg-aaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||| |||| || |||||||||| |||||||    
T  32302278 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaattgtatttaacatgttgtaggt 32302203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 10658850 - 10658888
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  10658850 ctaaggtaagggtgggactaaccttctttaattctaagt 10658888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 15140266 - 15140181
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||| ||||| ||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  15140266 ctaaggtatgggtgagactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttg 15140181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 16999488 - 16999454
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattcta 79  Q
    ||||||||||||| |||||||||||||||||||||    
T  16999488 taaggtaagggtgagactaactttctctaattcta 16999454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 18990900 - 18990846
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    ||||||||| ||||  |||||||||||||||||||||||  | ||||||||||||    
T  18990900 ctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaaa 18990846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 257
Target Start/End: Complemental strand, 25942366 - 25942312
Alignment:
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||| ||||||| |||||||||| |  ||||| ||||||||||||||||||||    
T  25942366 aattgatgttcaggttgtagaataatcttaggttaagtttcctatcaaatttggg 25942312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 39431340 - 39431402
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||||||| |||||||||| || | |||  |||||||||||||| ||||||||    
T  39431340 taagaattgatgttcaggttgtagaataatcatatgttatgtttcctatcaaatatgggattt 39431402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 75
Target Start/End: Original strand, 43276744 - 43276774
Alignment:
Q  45 taaggtaagggtgggactaactttctctaat 75  Q
    |||||||||||||||||||||||||||||||    
T  43276744 taaggtaagggtgggactaactttctctaat 43276774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 18074647 - 18074684
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  18074647 taaggtaagagtgggattaactttctctaattctaagt 18074684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 36704570 - 36704623
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||| |||| ||||| |||||  | |||||||||||    
T  36704570 ctaaggtaagggtgggactaaccttctttaattttaagttgtgtaattctgaaa 36704623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 58399 - 58443
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||    
T  58399 ccgatcatctaatctaaggtaagggtgggactagctttctctaat 58443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 8930881 - 8930965
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttc 243  Q
    ||||||||||| ||||||||||||| ||| |||||||||  ||| | |||  |||||  |||| |||||||| ||||||||||||    
T  8930881 aattgattgttgaaagagtaggtaaaccattgaattaacgaaaggaatgagcttcagattgtataataaacataggttgagtttc 8930965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 19195677 - 19195633
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||    
T  19195677 ccgatcatctaatctaaggtaagggtgggactagctttctctaat 19195633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0436 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 18 - 381
Target Start/End: Complemental strand, 9039 - 8677
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    ||||||| |||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  9039 gggagagtgaccaccgatcatcaatactaaggtaagggtgggactaactttctctaattctaagtattttaattctgaaaactgaattgaacatgatgta 8940  T
Q  118 ggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggc 217  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  8939 ggtggtaattttgatgagaagggaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataagaattgaagttcaggc 8840  T
Q  218 tgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttg 317  Q
    ||||||||||||| |||||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||| |||| ||||||  ||||||||    
T  8839 tgtagaataaacataggttgagtttcctatcaaatttgagattt-gagttgatgaaattggggcttttggagtgaaaactggtttgttcccatagatttg 8741  T
Q  318 tctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||  | |||||||| | || | ||||||||||||||||  ||||||||||||||||||||||||    
T  8740 tccgtcgcaactcgacccagcgagtaaacttactcgcctcgcgagctgcactttgacagcatcc 8677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 242; Significance: 1e-134; HSPs: 2)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 3 - 336
Target Start/End: Original strand, 29174 - 29506
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||     
T  29174 agaggagaaccaagagggagagagaccgtcgatcatcaatactaaggtaagagtgggactaactttctctaattctaagtattttaattctgaaaactgg 29273  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  29274 atttaacatgatgtagatggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaattcaatgaattaacataag 29373  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||| ||||||    
T  29374 aattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggcttttggagtgcaaactggtct 29472  T
Q  303 gttccggtagatttgtctatagcaactcgccaca 336  Q
    ||||| ||||||||||   | |||||||||||||    
T  29473 gttcccgtagatttgttcgtcgcaactcgccaca 29506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 121005 - 120931
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  121005 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 120931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 3 - 381
Target Start/End: Original strand, 21735 - 22102
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  |||||||||||  ||||||||| |||||||||||||| |||||||||||||||||||||||||||| ||||| | |||||||||     
T  21735 agaggagaaccaagagggagagagaccaccgatcatcaatactaaggtaaggatgggactaactttctctaattctaagtattttaaatttgaaaactgg 21834  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataag 202  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| || ||||||||||||||    
T  21835 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttgaaaatgattgttaaagagtaggtaattcaatgaattaacataag 21934  T
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattggtct 302  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||| |||  |    
T  21935 aattgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaattggggctttttgagtgaaaactggcat 22033  T
Q  303 gttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    ||||| |||||||||||          |||||||   ||||||||||||||||  | ||||||||||||||||||||||    
T  22034 gttcccgtagatttgtc----------cgccacagtgagtaaacttactcgcctcgtgagctgcactttgacagcatcc 22102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 135; Significance: 3e-70; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 3 - 177
Target Start/End: Complemental strand, 6462 - 6288
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||||||     
T  6462 agaggagaaccaagagggagagagaccgccgatcatcaatactaatgtaagggtgggactaactttctctaattctaagtattttaattttgaaaactgg 6363  T
Q  103 atttaacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagt 177  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6362 atttgacatgatgtaggtggtaattttgatgattagagaaattaggttttggtttggaattgattgttaaagagt 6288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 270 - 381
Target Start/End: Complemental strand, 6288 - 6177
Alignment:
Q  270 tgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcact 369  Q
    |||||||||||||||| ||||||||| |||||| || | ||||| |||||| | ||||||||||||| | ||||||||||||||||  ||||||| ||||    
T  6288 tgaaattggggcttttagagtgaaaactggtctatttccgtagagttgtctgtcgcaactcgccacagcgagtaaacttactcgcctcgcgagcttcact 6189  T
Q  370 ttgacagcatcc 381  Q
    ||||||||||||    
T  6188 ttgacagcatcc 6177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 295
Target Start/End: Original strand, 39965 - 40060
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaa 295  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||| ||||||||| || | ||||||||| ||| |||| | |||||||    
T  39965 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggattt-gggtagatgaaatttgggttttttgggtgaaaa 40060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 59771 - 59837
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| ||| ||||||||||||| |||||||| |||| |||||| ||| ||| ||||||||||    
T  59771 ttgattgttgaaatagtaggtaatccaatgaattaatataaaaattgatgtttaggttgtagaataa 59837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 126 - 355
Target Start/End: Original strand, 14667 - 14895
Alignment:
Q  126 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  14667 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaat 14766  T
Q  226 aaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatag 324  Q
    ||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  ||| ||| |||||||||| ||||| ||||   | |    
T  14767 aaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgataataggtctgttcccgtagagttgttcgtcg 14864  T
Q  325 caactcgccacaacaagtaaacttactcgcc 355  Q
    |||||||||||||| ||||||||||||||||    
T  14865 caactcgccacaacgagtaaacttactcgcc 14895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 126 - 355
Target Start/End: Original strand, 23725 - 23953
Alignment:
Q  126 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaat 225  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  23725 ttttgatgattagagaaattaggttttggtttggaattgattgttaaagagtaggtaatctaataaattaacataagaattgaagttcaggttgtagaat 23824  T
Q  226 aaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaattggtctgttccggtagatttgtctatag 324  Q
    ||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  ||| ||| |||||||||| ||||| ||||   | |    
T  23825 aaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgataataggtctgttcccgtagagttgttcgtcg 23922  T
Q  325 caactcgccacaacaagtaaacttactcgcc 355  Q
    |||||||||||||| ||||||||||||||||    
T  23923 caactcgccacaacgagtaaacttactcgcc 23953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 199 - 379
Target Start/End: Complemental strand, 18493 - 18314
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||||| ||    
T  18493 taagaattgaagttcaggctgtagaataaacataggttgagtttcctatcaaatttgggattt-gggttgatgaaagtggggcttttggagtgaaaactg 18395  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
     |||||||| |||||||| ||  | ||||||||||||| | |||| |||||||||||  ||||||| ||||||||||||||    
T  18394 atctgttcccgtagatttttccgtcgcaactcgccacagcgagtacacttactcgcctcgcgagcttcactttgacagcat 18314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 199 - 379
Target Start/End: Complemental strand, 32042 - 31864
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    ||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||    
T  32042 taagagttgaagttcaggctgtagaataa-cataggttgagtttcctatcaaatttgggatttgggtt-gatgaaattggggcttttggagtgaatattg 31945  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcat 379  Q
    ||||||||| |||||||||||  | ||||||||||||| | |||| |||||||||||| ||||   |||||||||||||||    
T  31944 gtctgttcccgtagatttgtccgtcgcaactcgccacagcgagtacacttactcgccccgcgattggcactttgacagcat 31864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 42571 - 42438
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||| ||    
T  42571 taagaattgaagttcaggctgtagaataaacctaggttgagtttcctatcaaatttggaattt-tgtttgatgaaattggggcttttggagtgaaaactg 42473  T
Q  299 gtctgttccggtagatttgtctatagcaactcgcc 333  Q
    ||||||||| || ||||||||  | ||||||||||    
T  42472 gtctgttcccgttgatttgtccgtcgcaactcgcc 42438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 199 - 318
Target Start/End: Original strand, 19452 - 19570
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| | |  |||||||||||||||||||||||||||||| ||    
T  19452 taagaattgaagttcaggctgtagaataaacataagttgagtttcctatcaaatttgggatat-gagttgatgaaattggggcttttggagtgaaaactg 19550  T
Q  299 gtctgttccggtagatttgt 318  Q
    ||||||||| ||||||||||    
T  19551 gtctgttcccgtagatttgt 19570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 72; Significance: 1e-32; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 381
Target Start/End: Complemental strand, 169339 - 169158
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    |||||||||||||||||| |||||||||| || ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| |    
T  169339 taagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaact 169242  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||| ||||| |||||| | ||||||||||||| |||||||| |||||||||  |||| |||||||||||||||||||    
T  169241 ggtctgttcccgtagagttgtctgtcgcaactcgccacagcaagtaaatttactcgcctcgcgacctgcactttgacagcatcc 169158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 199 - 381
Target Start/End: Complemental strand, 176692 - 176511
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaat-tggggcttttggagtgaaaatt 297  Q
    |||||||||||||||||| |||||||||| || ||||| |||||||||||||||||||| ||| |||  |||||||  | ||| ||||||  || ||| |    
T  176692 taagaattgaagttcaggttgtagaataatcataggttaagtttcctatcaaatttggggtttgggtg-gatgaaaaattgggtttttggc-tggaaact 176595  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatcc 381  Q
    |||||||||| ||||| |||||| | ||||||||||||| |||||||| |||||||||  |||| |||||||||||||||||||    
T  176594 ggtctgttcccgtagagttgtctgtcgcaactcgccacagcaagtaaatttactcgcctcgcgacctgcactttgacagcatcc 176511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 77740 - 77687
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  77740 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 77687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 32046 - 31994
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  32046 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 31994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 37353 - 37301
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  37353 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 37301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 44 - 266
Target Start/End: Complemental strand, 35543 - 35323
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaaa 143  Q
    |||||||||||||| ||||||||||||||||||||||||  | |||||||||||  ||| |||| |||| |||||||  || |||||   ||| | |||     
T  35543 ctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaat-tgagtttagcatgttgtaggt--tagttttgggaatttgggaa- 35448  T
Q  144 ttaggttttggtttgg-aattgattgttaaa-gagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtt 241  Q
    ||||||||||   | | ||||| |||||||| | ||| |||||||| | |||||||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  35447 ttaggttttgaagtcgtaattggttgttaaaagtgtatgtaatccaataaattaacataagaattgatgttcaggttgtagaataaacataggttgagtt 35348  T
Q  242 tcctatcaaatttgggatttaggtt 266  Q
    ||||||  |||||||||||||||||    
T  35347 tcctattgaatttgggatttaggtt 35323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 160 - 258
Target Start/End: Complemental strand, 12178 - 12080
Alignment:
Q  160 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| |||||||||| || ||||   ||||||||||||||||||||    
T  12178 aattgattgttaaagagtaggtaacccaatgaattaacataagaattgatgttcaggttgtagaataatcataggtgatgtttcctatcaaatttggga 12080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 43866 - 44003
Alignment:
Q  125 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 223  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||| || | |||||   ||  |||||| ||| ||| ||||||    
T  43866 attttgatgattagagaaattaggttttgatttggaattgattgttgaaaaagtagataattcaattaattagtgtacaaattgatgtttaggttgtaga 43965  T
Q  224 ataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    ||||||| ||||||||||||||||  ||||||||||||    
T  43966 ataaacataggttgagtttcctattgaatttgggattt 44003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 39174 - 39311
Alignment:
Q  125 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 223  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||| ||| ||||| |||| || |||||||   ||  |  | | ||||||| ||||||    
T  39174 attttgatctttagagaaattaggttttgatttggaattgattgttgaaaaagtagataattcaatgaattagtgtacaagataatgttcaggttgtaga 39273  T
Q  224 ataaacagaggttgagtttcctatcaaatttgggattt 261  Q
     |||||| ||||||| ||||||||  ||||||||||||    
T  39274 ttaaacataggttgaatttcctattgaatttgggattt 39311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 59; Significance: 7e-25; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 160 - 306
Target Start/End: Original strand, 66194 - 66338
Alignment:
Q  160 aattgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggat 259  Q
    |||||||| | ||||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| ||||||| |||||||||||||||    
T  66194 aattgattttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagagtttc-tatcaaatttgggat 66292  T
Q  260 ttaggtttgatgaaattggggcttttggagtgaaaattggtctgttc 306  Q
    ||  ||| ||||||||||||| |||||||||||||| ||||||||||    
T  66293 ttgagtt-gatgaaattggggattttggagtgaaaactggtctgttc 66338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 49 - 130
Target Start/End: Complemental strand, 110222 - 110141
Alignment:
Q  49 gtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||| ||||||||||| | ||||||| ||| |||||    
T  110222 gtaagggtgagactaactttctctaattctaagtgatataattctgaaaattgaatttaacaagttgtaggttgtagttttg 110141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 328287 - 328321
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattct 78  Q
    |||||||||||||||||||||||||||||||||||    
T  328287 ctaaggtaagggtgggactaactttctctaattct 328321  T

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Target: scaffold0004; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 75
Target Start/End: Complemental strand, 73139 - 73109
Alignment:
Q  45 taaggtaagggtgggactaactttctctaat 75  Q
    |||||||||||||||||||||||||||||||    
T  73139 taaggtaagggtgggactaactttctctaat 73109  T

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Target: scaffold0802 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 4708 - 4784
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||| | |||||||    
T  4708 ctaaggtaagggtgggactaactttctctaattctaagtagtataattctgaaaattgaatttaacaagttgtaggt 4784  T

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Target: scaffold0453 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 367
Target Start/End: Original strand, 7163 - 7330
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatg-aaattggggcttttggagtgaaaatt 297  Q
    ||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||| ||| || | |||| ||| | ||| ||||||  |||||| |    
T  7163 taagaatcgatgttcaggctgtagaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggtttttgg-ctgaaaact 7260  T
Q  298 ggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgca 367  Q
    |||||||||| ||||| ||||   | ||||| | ||||| | ||||||||||||||||  ||||||||||    
T  7261 ggtctgttcccgtagagttgttcgtcgcaacacaccacatcgagtaaacttactcgcctcgcgagctgca 7330  T

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Target: scaffold0422 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 199 - 380
Target Start/End: Complemental strand, 3863 - 3683
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaattg 298  Q
    ||||||| || ||||||| ||| ||||||||| |||||||||||||||||||||||||| ||| || | |||||||    || |||| |  |||||| ||    
T  3863 taagaatcgatgttcaggttgttgaataaacataggttgagtttcctatcaaatttggggttt-gggtggatgaaaaattgggttttcggctgaaaactg 3765  T
Q  299 gtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgcactttgacagcatc 380  Q
    ||||||||| ||||| ||||   | ||||||||||||| | ||||||||||||||||  |||| ||||||  ||||||||||    
T  3764 gtctgttcccgtagagttgttcgtcgcaactcgccacagcgagtaaacttactcgcctcgcgatctgcacagtgacagcatc 3683  T

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Target: scaffold0026 (Bit Score: 51; Significance: 4e-20; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 162 - 295
Target Start/End: Complemental strand, 22058 - 21925
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||||||||||||||   ||||||||  |||||||||  ||||||| |||||||||| || ||||| |||||||||||||||||||||||    
T  22058 ttgattgttgaaagagtaggtaatctgatgaattaaggtaagaattggtgttcaggttgtagaataatcataggttaagtttcctatcaaatttgggatt 21959  T
Q  261 taggtttgatgaaattggggcttttggagtgaaaa 295  Q
    | || | ||||||||| ||| |||| | |||||||    
T  21958 t-gggtagatgaaatttgggttttttgggtgaaaa 21925  T

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Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 146776 - 146723
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||| ||||||||||||||| ||||||||||||||  | |||||||||||    
T  146776 ctaaggtatgggtgggactaacttactctaattctaagttgtataattctgaaa 146723  T

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Target: scaffold0819 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 5460 - 5352
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| |||||||||  || |||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| |||    
T  5460 agaggagaaccaagagggagagagaccgccgatcattaattctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattga 5362  T
Q  103 atttaacatg 112  Q
    ||||||||||    
T  5361 atttaacatg 5352  T

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Target: scaffold0628 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 1044 - 1133
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||| |  ||||||||||||||||||||||||||||| |||||||||  | |||||||||||| ||||||||||| | |||||||    
T  1044 ccgatcatctaatctaaggtaagggtgggactaactttctcttattctaagtgttataattctgaaaattgaatttaacaagttgtaggt 1133  T

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Target: scaffold0205 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 5695 - 5832
Alignment:
Q  125 attttgatgattagagaaattaggttttggtttggaattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 223  Q
    |||||||||||||||||||||||||||||  |  |||||||||||| ||| | ||| |||| || |||||||   ||  |||||| ||||||| ||||||    
T  5695 attttgatgattagagaaattaggttttgaatcagaattgattgttgaaaaactagataattcaatgaattagtgtacaaattgatgttcaggttgtaga 5794  T
Q  224 ataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    ||||||| ||||||||||||| ||  ||||||||||||    
T  5795 ataaacataggttgagtttcccattgaatttgggattt 5832  T

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Target: scaffold0205; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 30705 - 30631
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||| ||||||| |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  30705 aaggtaagggtgagactaaccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 30631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 261
Target Start/End: Original strand, 35565 - 35702
Alignment:
Q  125 attttgatgattagagaaattaggttttggtttggaa-ttgattgttaaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 223  Q
    ||||||||| ||||||||||||||||||| ||| ||| |||||||||||| ||||| |||| || |||||||   ||  |||||   |||||| ||||||    
T  35565 attttgatggttagagaaattaggttttgatttagaatttgattgttaaaaagtagataattcaatgaattagtgtacaaattgttattcaggttgtaga 35664  T
Q  224 ataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||| || ||||| ||||||||||||||||||| ||||    
T  35665 ataatcataggtttagtttcctatcaaatttggaattt 35702  T

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Target: scaffold0071 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 15364 - 15287
Alignment:
Q  5 aggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||| |||  ||||||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  15364 aggagaaccaagagggagagagatcgccgatcatcattactaaggtaagggtgggactaactttctctaattctaagt 15287  T

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Target: scaffold0220 (Bit Score: 49; Significance: 6e-19; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 20007 - 19931
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||||||| || |||||||| | |||||||    
T  20007 ctaaggtaagggtgggactaactttctctaattctaagtgttataattctgaaaattggatttaacaagttgtaggt 19931  T

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Target: scaffold0220; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 367
Target Start/End: Complemental strand, 13756 - 13679
Alignment:
Q  290 tgaaaattggtctgttccggtagatttgtctatagcaactcgccacaacaagtaaacttactcgccctgcgagctgca 367  Q
    |||||| ||||||||||| ||| | |||||| | ||||||| ||||||| | ||||||||||||||  ||||||||||    
T  13756 tgaaaactggtctgttcccgtaaagttgtctgtcgcaactccccacaacgattaaacttactcgcctcgcgagctgca 13679  T

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Target: scaffold0577 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0577
Description:

Target: scaffold0577; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 9138 - 9029
Alignment:
Q  18 gggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||||| |||  ||||||| ||| || |||||||| |||||| |||||||| | ||||    
T  9138 gggagagagaccgccgatcatcaatactaaggtaagggtgggactaaccttcagtaattctgagt-atgtaattctg-aaactggatttaacaggttgta 9041  T
Q  118 ggtggtaatttt 129  Q
    ||| ||| ||||    
T  9040 ggttgtagtttt 9029  T

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Target: scaffold0037 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 112965 - 113052
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctg-aaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    ||||| ||||||||||||||||||||||||||||||||| || ||| |||| |||| ||||||||||| | ||||||| |||||||||    
T  112965 ctaagataagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaacaagttgtaggttgtaattttg 113052  T

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Target: scaffold0037; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 117805 - 117873
Alignment:
Q  43 actaaggtaagggtgggactaactttctctaattctaagtaatttaattctg-aaaactgaatttaaca 110  Q
    |||||||||||||||||||||||||||||||||||||||| || ||| |||| |||| |||||||||||    
T  117805 actaaggtaagggtgggactaactttctctaattctaagtgatataactctgaaaaattgaatttaaca 117873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 3 - 97
Target Start/End: Complemental strand, 1259 - 1165
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |||  ||||||||||| |||||| ||| ||||||||||||||||| ||||||||||  ||||||||||||  | |||||||||||    
T  1259 agaggagaaccaagagggagagagaccgccgattatcaatactaaggtaagggtgtgactaacttttcctaattctaagttgtataattctgaaa 1165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1941 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1941
Description:

Target: scaffold1941; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 191 - 116
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  191 ctaaggtaagggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 257
Target Start/End: Original strand, 8925 - 9009
Alignment:
Q  173 agagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| || | ||||||||| |||||||||| ||||||| ||||||||||||  ||||||||||||||||  ||||||||    
T  8925 agagtaggtagtcgaatgaattaacgtaagaattgatgttcaggttgtagaataaacttaggttgagtttcctattgaatttggg 9009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 75
Target Start/End: Complemental strand, 23628 - 23556
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||| |||  |||| ||||||||||||||||| |||||||||||||||| |||||| |||||||||||    
T  23628 agaggagaaccaagagggaaagagactgccgatcatcaatactaaggtaagggtaggactagctttctctaat 23556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 17926 - 17993
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    ||||||||| |  |||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  17926 ccgatcatctaatctaaggtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 17993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 16698 - 16572
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| | |||||||| ||||||||  |||||||||||||| ||| |||||||||||||  | | |||||| ||||||     
T  16698 agaggagaaccaagagggagagagaccgacgatcatcaatactaagcaaagggtgggactaaatttatctaattctaagttgtatgattctg-aaactgg 16600  T
Q  103 atttaacatgatgtaggtggtaattttg 130  Q
    ||||||||||  |||||| ||| |||||    
T  16599 atttaacatgtggtaggttgtagttttg 16572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 4438 - 4340
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 142  Q
    ||||||||| | |||||||||| |||| |||||||||||  | ||||||||| ||||| |||||||||| ||||||| ||| |||||| |||| |||||    
T  4438 ctaaggtaacgatgggactaaccttctttaattctaagttgtataattctgagaactggatttaacatgttgtaggttgtagttttgaggatttgagaa 4340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 13416 - 13501
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||| |||  ||||||||||   |||||||||||||||||||||||||| | ||||||| ||| |||||    
T  13416 ctaaggtaagggtgggactaaccttcaataattctaaggg-tttaattctgaaaactgaatttaacaagttgtaggttgtagttttg 13501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 60948 - 60850
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 142  Q
    ||||||||||| || ||||||| |||| |||||||||||  | ||||||||| || ||||||||||||| ||||||| ||| |||||| |||| |||||    
T  60948 ctaaggtaaggatgagactaaccttctttaattctaagttgtataattctgagaattgaatttaacatgttgtaggttgtagttttgaggatttgagaa 60850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 160 - 261
Target Start/End: Original strand, 127459 - 127561
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||| ||| ||||||||| |||| | ||| |||||   ||||||||||||| |||||||||||||| |  |||||||||    
T  127459 aattgattgttgaaagagtaggtaaaccattgaattaacgtaaggaatgaggttcaaattgtagaataaacataggttgagtttccttttgaatttggga 127558  T
Q  259 ttt 261  Q
    |||    
T  127559 ttt 127561  T

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Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 135503 - 135588
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||| ||| ||||||||||||  | |||||||||||| ||||||||||| | ||||||| ||| |||||    
T  135503 ctaaggtaagggtgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggttgtagttttg 135588  T

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Target: scaffold0217 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 162 - 322
Target Start/End: Complemental strand, 28650 - 28491
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||| |||||||||| | ||||||||||||| |||||| ||||||| ||||||||||  | | ||   ||||||| ||||||||||||||    
T  28650 ttgattgttgaaagtgtaggtaatctaatgaattaacataaaaattgatgttcaggttgtagaataataatacgtaatgtttcctgtcaaatttgggatt 28551  T
Q  261 taggtttgatgaaattggggcttttggagtgaaaattggtctgttccggtagatttgtctat 322  Q
    | || | | ||||||||||| |||| | ||||||| |||| | |||| ||||| ||||||||    
T  28550 t-gggtagttgaaattgggg-tttttgtgtgaaaactggtttcttcccgtagagttgtctat 28491  T

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Target: scaffold0104 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 15051 - 14942
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| | |||||||| |||||||||| |||||||||||||  || | |||||||||||  |  ||||||||||| ||     
T  15051 agaggagaaccaagagggagagagaccgtcgatcatcaatactaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaaattgg 14952  T
Q  103 atttaacatg 112  Q
    ||||||||||    
T  14951 atttaacatg 14942  T

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Target: scaffold0104; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 17071 - 16962
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| | |||||||| |||||||||| |||||||||||||  || | |||||||||||  |  ||||||||||| ||     
T  17071 agaggagaaccaagagggagagagaccgtcgatcatcaatactaaggtgagggtgggactaaacttatataattctaagttgtagaattctgaaaattgg 16972  T
Q  103 atttaacatg 112  Q
    ||||||||||    
T  16971 atttaacatg 16962  T

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Target: scaffold1766 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1766
Description:

Target: scaffold1766; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 695 - 770
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||| ||||||||||||||||||||||||||||||  | |||||||| ||| ||| ||||||||| |||||||    
T  695 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctg-aaattgagtttaacatgttgtaggt 770  T

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Target: scaffold1633 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 1257 - 1205
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  1257 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 1205  T

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Target: scaffold1283 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 468 - 520
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  468 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 520  T

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Target: scaffold0151 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 199 - 295
Target Start/End: Complemental strand, 9994 - 9899
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtttgatgaaattggggcttttggagtgaaaa 295  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||||||||||| ||||||||| || | ||||||||| ||| |||| | |||||||    
T  9994 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaaattgggattt-gggtagatgaaatttgggttttttgggtgaaaa 9899  T

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Target: scaffold0151; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 31161 - 31086
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||| |||  ||||||| ||| || |||||||||||| || |||||||| | |||||||    
T  31161 ctaaggtaagggtgggactaaccttcaataattctgagt-atgtaattctgaaaattggatttaacaagttgtaggt 31086  T

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Target: scaffold0077 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 34391 - 34339
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  34391 taaggtaagggtgggactaactttctctaattctaatttgtttaattctgaaa 34339  T

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Target: scaffold0077; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 6003 - 5929
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtagg 119  Q
    |||||||||||||||||||||| |||| |||||||||||  | |||||||| ||| ||||||||||||| ||||||    
T  6003 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctg-aaattgaatttaacatgttgtagg 5929  T

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Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 78185 - 78237
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  78185 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 78237  T

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Target: scaffold0019 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 24131 - 24183
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||||||||||||||  | |||||||||||    
T  24131 taaggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 24183  T

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Target: scaffold0019; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 30122 - 30048
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||| |||  ||| |||||||  |||||||||||||| || |||||||||| |||||||    
T  30122 aaggtaagggtgggactaaccttcaataaatctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 30048  T

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Target: scaffold0064 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 82
Target Start/End: Complemental strand, 58812 - 58761
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||| | | ||||||||||||||||||||||||||||||||||||||    
T  58812 ccgatcatctaaattaaggtaagggtgggactaactttctctaattctaagt 58761  T

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Target: scaffold0043 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 28029 - 27954
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  28029 taaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 27954  T

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Target: scaffold0043; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 42887 - 42812
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  42887 taaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 42812  T

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Target: scaffold0032 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 98
Target Start/End: Original strand, 61834 - 61901
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    ||||||||| |  |||||||||||||| ||||||||||||||||||||||||  | ||||||||||||    
T  61834 ccgatcatctaatctaaggtaagggtgagactaactttctctaattctaagttgtataattctgaaaa 61901  T

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Target: scaffold1256 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold1256
Description:

Target: scaffold1256; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 2199 - 2253
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    ||||||||||||||||||||| |||||||||||||||||  | ||||||||||||    
T  2199 ctaaggtaagggtgggactaattttctctaattctaagttgtataattctgaaaa 2253  T

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Target: scaffold0956 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0956
Description:

Target: scaffold0956; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 2248 - 2310
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||| ||||    
T  2248 taagaattgatgttcaggttgtagaataatcacaggttaagtttcctatcaaatttggcattt 2310  T

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Target: scaffold0956; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 31 - 97
Target Start/End: Complemental strand, 2621 - 2555
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||| |  ||| |||||||||||||||||||||||||||||||||||  | |||||||||||    
T  2621 ccgatcatctaatctacggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 2555  T

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Target: scaffold0594 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 2178 - 2076
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| ||||||||||||||||  |||| |||  ||| |||||  ||||||| |||||||||| || |||| || ||| |||||||||||||||    
T  2178 aattgattgttgaaagagtaggtaatccgatgaactaaggtaataattggtgttcaggttgtagaataatcataggtagatttttctatcaaatttggga 2079  T
Q  259 ttt 261  Q
    |||    
T  2078 ttt 2076  T

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Target: scaffold0364 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 8063 - 8005
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||||||||||||||||||    
T  8063 taagaattgatgttcaggttgtagaataatcataggttaagtttcctatcaaatttggg 8005  T

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Target: scaffold0213 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 98
Target Start/End: Complemental strand, 19260 - 19206
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    |||| ||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  19260 ctaacgtaagggtgggactaactttctctaattctaagttgtataattctgaaaa 19206  T

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Target: scaffold0207 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 13391 - 13476
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||||||||||||||| ||||  | |||||||| ||| ||| |||| |||| ||||||| ||| |||||    
T  13391 ctaaggtaagggtgggactaactttctctaattccaagttgtataattctg-aaattgagtttagcatgttgtaggttgtagttttg 13476  T

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Target: scaffold0175 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 8695 - 8610
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||| ||| ||||||||||||  | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  8695 ctaaggtaagggtgggactaaccttcactaattctaagt-gtatgattctgaaaattgaatttaacaggttgtaggttgtagttttg 8610  T

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Target: scaffold0056 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 67174 - 67108
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaaca 110  Q
    ||||||||| |||||||||||||||||||||||| ||||  | |||||||||||| || ||||||||    
T  67174 ctaaggtaaaggtgggactaactttctctaattcgaagtggtataattctgaaaattggatttaaca 67108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 17043 - 16977
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  17043 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 16977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 26574 - 26508
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| ||||||||||||||||| |||||||| |||| |||||| ||||||| ||||||||||    
T  26574 ttgattgttgaaagagtaggtaatccaatgaattaatataaaaattgatgttcaggttgtagaataa 26508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 196 - 233
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||||||||||||||||||||||||||||    
T  196 taaggtaagggtgggactaactttctctaattctaagt 233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0256 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 112
Target Start/End: Original strand, 1845 - 1913
Alignment:
Q  43 actaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    ||||||||  ||||||||||||||||||||||||||||||  | |||||||| ||| |||||||||||||    
T  1845 actaaggtgtgggtgggactaactttctctaattctaagtggtataattctg-aaattgaatttaacatg 1913  T

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Target: scaffold0241 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 3235 - 3182
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  3235 ctaaggtaagggttggactaactttctctaattctaagttgtataattctgaaa 3182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 5374 - 5329
Alignment:
Q  20 gagagagactgccgatcatccatactaaggtaagggtgggactaac 65  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||    
T  5374 gagagagaccgccgatcatcaatactaaggtaagggtgggactaac 5329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0153; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 12394 - 12349
Alignment:
Q  20 gagagagactgccgatcatccatactaaggtaagggtgggactaac 65  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||    
T  12394 gagagagaccgccgatcatcaatactaaggtaagggtgggactaac 12349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 29572 - 29625
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||||||||||||| |||||||||||  | |||||||||||    
T  29572 ctaaggtaagggtgggactaactttctataattctaagttgtataattctgaaa 29625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 171 - 261
Target Start/End: Complemental strand, 21466 - 21376
Alignment:
Q  171 aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||||||||   ||||||||  ||| |||||  ||||||| |||||||||| || || || ||||| ||||||||||||||||||    
T  21466 aaagagtaggtaatctgatgaattaaggtaataattggtgttcaggttgtagaataatcatagtttaagttttctatcaaatttgggattt 21376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 21664 - 21626
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  21664 ctaaggtaagggtgggactagctttctctaattctaagt 21626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 5432 - 5383
Alignment:
Q  48 ggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||||    
T  5432 ggtaagggtgggactaactttctctaattctaagttgtataattctgaaa 5383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 97
Target Start/End: Original strand, 12534 - 12585
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||| |||||||||||||||||||||  | |||||||||||    
T  12534 aaggtaagggtgggaataactttctctaattctaagttgtataattctgaaa 12585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 97
Target Start/End: Original strand, 168998 - 169051
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||| ||||||||||||||||||||||||||||||  | |||||||||||    
T  168998 ctaaggtaggggtgggactaactttctctaattctaagttgtataattctgaaa 169051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 143663 - 143611
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  143663 taaggtaagggtgtgactaactttctctaattctaagttgtataattctgaaa 143611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1939 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold1939
Description:

Target: scaffold1939; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 160 - 223
Target Start/End: Complemental strand, 65 - 1
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtaga 223  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||| ||||| | ||||||    
T  65 aattgattgttgaaagagtaggtaatccaaagaattaacataagaattgatgttcatgttgtaga 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 4714 - 4766
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||| |||||||||||||||||||||||||  | |||||||||||    
T  4714 taaggtaagggtcggactaactttctctaattctaagttgtataattctgaaa 4766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0671 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 4993 - 4901
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgatt 136  Q
    |||||||||||||||||||||| |||| |||||||||||  | ||||||||| |  || |||||||||| ||||||  ||| |||||| ||||    
T  4993 ctaaggtaagggtgggactaaccttctttaattctaagttgtataattctgagagttggatttaacatgttgtaggatgtagttttgaggatt 4901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 20085 - 20160
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||| ||||||||| ||| ||||||||||||  | |||||||||||| ||||||||||| | |||||||    
T  20085 ctaaggtaagggcgggactaaccttcactaattctaagt-gtataattctgaaaattgaatttaacaggttgtaggt 20160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 7330 - 7254
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||| |||||||||||||| |||| |||||||||||  | |||||||||||| || |||| ||||| |||||||    
T  7330 ctaaggtgagggtgggactaacattctttaattctaagttgtataattctgaaaattggatttgacatgttgtaggt 7254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 45 - 97
Target Start/End: Complemental strand, 79101 - 79049
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||||||||||    
T  79101 taaggtaagggtgagactaactttctctaattctaagttgtataattctgaaa 79049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 398615 - 398523
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgatt 136  Q
    |||||||||||||||||||||| |||| |||||||| ||  | ||||||||| || || |||||||||| ||||||  ||| |||||| ||||    
T  398615 ctaaggtaagggtgggactaaccttctttaattctaggttgtataattctgagaattggatttaacatgttgtaggatgtagttttgaggatt 398523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 1039 - 972
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtt 266  Q
    ||||| |||| ||||||| ||||| |||| || ||||| |||||||||||||||||||||||| ||||    
T  1039 taagagttgatgttcaggttgtaggataatcataggttaagtttcctatcaaatttgggatttgggtt 972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 117
Target Start/End: Complemental strand, 7606 - 7535
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgta 117  Q
    |||||||||||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| ||||    
T  7606 aaggtaagggtgggactagccttcaataattctaagtgttttaattctgaaaaatgtatttaacatgttgta 7535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 97
Target Start/End: Original strand, 5712 - 5759
Alignment:
Q  50 taagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||    
T  5712 taagggtgggactaactttctctaattctaagttgtataattctgaaa 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 2752 - 2650
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||  ||| |||||| || | ||| |||||||||||||||||||||    
T  2752 aattgattgttgaaagagtaggtaatctgatgaattaaggtaataattggtgttcagattgttgaataatcatacgttaagtttcctatcaaatttggga 2653  T
Q  259 ttt 261  Q
    |||    
T  2652 ttt 2650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 5304 - 5342
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  5304 ctaaggtaagggtgggactaactttctctaattttaagt 5342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 571 - 533
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  571 ctaaggtaagggtgagactaactttctctaattctaagt 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 2024 - 1962
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| ||| ||| |||||||||| |  ||||| ||||||||||||||||||||||||    
T  2024 taagaattgatgtttaggttgtagaataatcgtaggttaagtttcctatcaaatttgggattt 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 120
Target Start/End: Complemental strand, 21714 - 21625
Alignment:
Q  30 gccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    ||||||||| ||| |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  21714 gccgatcattcattctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 21625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 48 - 82
Target Start/End: Original strand, 6688 - 6722
Alignment:
Q  48 ggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||||||||||||||||||||||||    
T  6688 ggtaagggtgggactaactttctctaattctaagt 6722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 6910 - 6976
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataa 227  Q
    ||||||||| |||| ||| ||||| || |||||||||||||||||||| ||||||| ||||||||||    
T  6910 ttgattgttgaaagtgtatgtaattcaatgaattaacataagaattgatgttcaggttgtagaataa 6976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 160 - 261
Target Start/End: Complemental strand, 8779 - 8677
Alignment:
Q  160 aattgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||||| |||||||||||||||   ||||||||  ||| |||||  ||||||| || ||| ||| || |||| |||||| |||||||||||||||    
T  8779 aattgattgttgaaagagtaggtaatcagatgaattaaggtaataattggtgttcaggttgcagagtaatcataggtagagttttctatcaaatttggga 8680  T
Q  259 ttt 261  Q
    |||    
T  8679 ttt 8677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 8990 - 8932
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggg 257  Q
    |||||||||| ||||||| |||||||||| || | ||| ||||||||||||||||||||    
T  8990 taagaattgatgttcaggttgtagaataatcatatgttaagtttcctatcaaatttggg 8932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 142
Target Start/End: Original strand, 52543 - 52641
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 142  Q
    ||||| |||||||||||||||| |||  |||||||||||  | ||||||||| || || |||||||||| ||||||  ||| |||||| |||| |||||    
T  52543 ctaagataagggtgggactaaccttcattaattctaagttgtgtaattctgagaattggatttaacatgttgtaggatgtagttttgaggatttgagaa 52641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 29441 - 29355
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||||  |||| |||||||||||  | | |||||||||| || |||||||| | ||||||| ||| |||||    
T  29441 ctaaggtaagggtgggactaatcttctttaattctaagttgtatgattctgaaaagtggatttaacaagttgtaggttgtagttttg 29355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 106050 - 106088
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  106050 ctaaggtaagggtgtgactaactttctctaattctaagt 106088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Original strand, 13032 - 13107
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  13032 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 13107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 46 - 120
Target Start/End: Complemental strand, 21746 - 21672
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||| | |||  |||||||||||  ||||||| |||||| || |||||||||| |||||||    
T  21746 aaggtaagggtgggactagccttcaataattctaagtgttttaattttgaaaattgtatttaacatgttgtaggt 21672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 96451 - 96354
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttgatgattagagaa 142  Q
    |||| |||| ||||||||||||||||||||||||| |||  | | |||||||||| || |||||||| | ||||||| ||| |||||| |||| |||||    
T  96451 ctaaagtaaaggtgggactaactttctctaattctgagttgtatgattctgaaaa-tggatttaacaagttgtaggttgtagttttgaggattggagaa 96354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 1532 - 1475
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtggga 60  Q
    ||||||||| |||| |||||| || | |||||||||| ||||||||||||||||||||    
T  1532 agaggagaaccaaaagggagacaggccgccgatcatcaatactaaggtaagggtggga 1475  T

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Target: scaffold0407 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0407
Description:

Target: scaffold0407; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 82
Target Start/End: Original strand, 11274 - 11311
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  11274 taaggtaagggtgagactaactttctctaattctaagt 11311  T

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Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 3 - 112
Target Start/End: Complemental strand, 13731 - 13624
Alignment:
Q  3 agaggagaagcaaaggggagagagactgccgatcatccatactaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactga 102  Q
    ||||||||| |||  ||||||||||| || || |||| |||||| ||||||||||||| |||| |||  ||||||||||| || | |||||||| | |||    
T  13731 agaggagaaccaacagggagagagaccgctgaccatcaatactacggtaagggtgggagtaaccttcaataattctaagt-atgtgattctgaaga-tga 13634  T
Q  103 atttaacatg 112  Q
    ||||||||||    
T  13633 atttaacatg 13624  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 162 - 258
Target Start/End: Original strand, 18976 - 19073
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    ||||||||| |||| |||||||||||| |||| ||| |||| ||| || ||||||| ||||||||||  | ||||   ||||||||||||||||||||    
T  18976 ttgattgttgaaagtgtaggtaatccaatgaactaatataaaaatcgatgttcaggttgtagaataacaataggtgatgtttcctatcaaatttggga 19073  T

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Target: scaffold0028 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 130
Target Start/End: Original strand, 3053 - 3136
Alignment:
Q  46 aaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||||||||||||||||||| |||  |||||||||||  | | |||||||||| ||||||||||| | ||||||| ||| |||||    
T  3053 aaggtaagggtgggactaaccttcaataattctaagt-gtattattctgaaaattgaatttaacaagttgtaggttgtagttttg 3136  T

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Target: scaffold1439 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 975 - 916
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttggga 258  Q
    |||||||||| ||||||| |||||||||| || ||||| ||||| ||| |||||||||||    
T  975 taagaattgatgttcaggttgtagaataatcataggttaagttttctaacaaatttggga 916  T

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Target: scaffold0106 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 203 - 266
Target Start/End: Complemental strand, 21879 - 21816
Alignment:
Q  203 aattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatttaggtt 266  Q
    |||||| ||||||| |||||||||| || || || || ||||||||||||||||||||| ||||    
T  21879 aattgatgttcaggttgtagaataatcatagattaagcttcctatcaaatttgggatttgggtt 21816  T

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Target: scaffold0092 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 300
Target Start/End: Original strand, 38558 - 38695
Alignment:
Q  162 ttgattgtt-aaagagtaggtaatccagtgaattaacataagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggatt 260  Q
    ||||||||| |||| |||||||||||| ||||||||||| | |||||| ||||||| ||| ||||||  | ||||   ||||| | ||||||||| ||||    
T  38558 ttgattgttgaaagtgtaggtaatccaatgaattaacatgaaaattgatgttcaggttgtggaataacaataggtaatgtttcttgtcaaatttgagatt 38657  T
Q  261 taggtttgatgaaattggggcttttggagtgaaaattggt 300  Q
    | || | | ||||||||||| |||||| ||||||| ||||    
T  38658 t-gggtagttgaaattggggtttttgg-gtgaaaactggt 38695  T

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Target: scaffold0080 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 21793 - 21867
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||| ||||||||||| |||||||||||||||||  | || ||||| ||| |||||||| |||| |||||||    
T  21793 taaggtaatggtgggactaaatttctctaattctaagttgtatagttctg-aaattgaatttagcatgttgtaggt 21867  T

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Target: scaffold0625 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0625
Description:

Target: scaffold0625; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 98
Target Start/End: Original strand, 5860 - 5914
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaa 98  Q
    ||||||||| ||||  |||||||||||||||||||||||  | ||||||||||||    
T  5860 ctaaggtaaaggtgatactaactttctctaattctaagtgttataattctgaaaa 5914  T

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Target: scaffold0285 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Complemental strand, 19806 - 19768
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  19806 ctaaggtaagggtgagactgactttctctaattctaagt 19768  T

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Target: scaffold0096 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 120
Target Start/End: Complemental strand, 22141 - 22075
Alignment:
Q  54 ggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||| | |||  |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  22141 ggtgggactagccttcaataattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 22075  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 174261 - 174323
Alignment:
Q  199 taagaattgaagttcaggctgtagaataaacagaggttgagtttcctatcaaatttgggattt 261  Q
    |||||||||| | ||||| |||||||||| || | ||| |||||||||||||||||| |||||    
T  174261 taagaattgatggtcaggttgtagaataatcatatgttaagtttcctatcaaatttgagattt 174323  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 82
Target Start/End: Original strand, 126304 - 126341
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagt 82  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  126304 ctaaggtaagg-tgggactaactttctctaattctaagt 126341  T

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Target: scaffold0848 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0848
Description:

Target: scaffold0848; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 2021 - 2105
Alignment:
Q  45 taaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggtggtaattttg 130  Q
    |||| ||||||||||| |||| ||| ||||||||||||  | | ||| |||||| ||||||||||||| ||||||| ||| |||||    
T  2021 taagctaagggtgggattaaccttcactaattctaagt-gtatgattttgaaaattgaatttaacatgttgtaggttgtagttttg 2105  T

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Target: scaffold0112 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 2942 - 2889
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaa 97  Q
    ||||||||||||||||| ||||||||||||||| || ||  | |||||||||||    
T  2942 ctaaggtaagggtgggattaactttctctaattttaggttgtataattctgaaa 2889  T

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Target: scaffold0452 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 12649 - 12697
Alignment:
Q  72 taattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||  |||||||||||||| || |||||||||| |||||||    
T  12649 taattctaagtgttttaattctgaaaattgtatttaacatgttgtaggt 12697  T

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Target: scaffold0379 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0379
Description:

Target: scaffold0379; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 112
Target Start/End: Original strand, 3892 - 3959
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    |||||||||||| ||||||||| |||  ||||| | |||| | |||||||||||| |||||||||||||    
T  3892 ctaaggtaagggagggactaaccttcaataattatgagta-tgtaattctgaaaattgaatttaacatg 3959  T

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Target: scaffold0328 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 31 - 75
Target Start/End: Original strand, 18626 - 18670
Alignment:
Q  31 ccgatcatccatactaaggtaagggtgggactaactttctctaat 75  Q
    ||||||||| |  |||||||||||||||||||| |||||||||||    
T  18626 ccgatcatctaatctaaggtaagggtgggactagctttctctaat 18670  T

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Target: scaffold0029 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 12239 - 12164
Alignment:
Q  44 ctaaggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatgatgtaggt 120  Q
    |||||||||||||||||||||| |||  ||||  ||||| | || |||||||||| || |||||||||| |||||||    
T  12239 ctaaggtaagggtgggactaacattcaataatcttaagtca-ttgattctgaaaattggatttaacatgttgtaggt 12164  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 126840 - 126776
Alignment:
Q  48 ggtaagggtgggactaactttctctaattctaagtaatttaattctgaaaactgaatttaacatg 112  Q
    |||||||||||||||| | ||   |||||||||||  |||||||||||||| || ||||||||||    
T  126840 ggtaagggtgggactagccttaaataattctaagtgttttaattctgaaaattgtatttaacatg 126776  T

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