View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17836_high_30 (Length: 344)
Name: NF17836_high_30
Description: NF17836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17836_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 310; Significance: 1e-174; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 21878200 - 21878525
Alignment:
| Q |
1 |
ggtaggttatctgaagaggaggttaaggaggtgagtattgagattatgtaaattctttttataccaatcttttttcctatgatgcactgaccaagaacag |
100 |
Q |
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| T |
21878200 |
ggtaggttatccgaagaggaggttaaggaggtgagtattgagattatgtaaattctttttataccaatcttttttcctatgatgcactgaccaaaaacag |
21878299 |
T |
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| Q |
101 |
actcaaacatcggtaatagtttgaaaaattgaaatgattgtatgttcatgtgtcagatatttgttcacgctttcaatacatattgtcgagtgttggtgct |
200 |
Q |
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|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
21878300 |
actcaaacattggtaatagtttgaaaaattgaaatgattgtatgttcatgtgtcagatatttggtcacgctttcaatacatattgtcgagtgttggtgct |
21878399 |
T |
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| Q |
201 |
acgtagctttatacaattctgttaaatagaattctaactgtttttgtgtaaaaggttatagtgttgagtgcttctgcaaatagattgggaaatcttaaac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21878400 |
acgtagctttatacaattctgttaaatagaattctaactgtttttgtgtaaaaggttatagtgttgagtgcttctgcaaatagattgggaaatcttaaac |
21878499 |
T |
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| Q |
301 |
aacatgctgataattatgcttctttg |
326 |
Q |
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|||||||||||||||||||||||||| |
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| T |
21878500 |
aacatgctgataattatgcttctttg |
21878525 |
T |
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