View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17836_high_55 (Length: 233)
Name: NF17836_high_55
Description: NF17836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17836_high_55 |
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Alignment Details
Target: chr6 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 9071261 - 9071456
Alignment:
| Q |
18 |
gacaagaaaattcattcgggtaagataactataaaatttaagagaaattcataatgttattgtttaactgatacaagatttatggtcctcaatcaaggac |
117 |
Q |
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| T |
9071261 |
gacaagaaaattcattcgggtaagataactataaaatttaagagaaattcataatggtattgtttaactgatacaagatttatggtcctcaatcaaggac |
9071360 |
T |
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| Q |
118 |
cattttcctttcctttattctcaataggacaaatatcagcatctttatcattcatctgagttcatttcaacttcatatgctcacagacatgacttg |
213 |
Q |
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|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9071361 |
cattttcctttcctttattctcaaaaggacaaatatcagcatctttatcattcatctgagttcatttcaacttcatatgctcacagacatgacttg |
9071456 |
T |
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