View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17836_high_58 (Length: 229)

Name: NF17836_high_58
Description: NF17836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17836_high_58
NF17836_high_58
[»] scaffold0063 (1 HSPs)
scaffold0063 (107-216)||(67721-67830)
[»] chr7 (7 HSPs)
chr7 (108-218)||(11002884-11002994)
chr7 (115-216)||(8026755-8026855)
chr7 (109-218)||(15494482-15494591)
chr7 (108-160)||(33868393-33868445)
chr7 (9-40)||(8026650-8026681)
chr7 (116-213)||(20912585-20912682)
chr7 (1-41)||(11674319-11674359)
[»] chr2 (2 HSPs)
chr2 (107-205)||(24125223-24125321)
chr2 (1-41)||(24125389-24125429)
[»] chr6 (5 HSPs)
chr6 (108-217)||(26533464-26533573)
chr6 (107-218)||(31449825-31449936)
chr6 (108-180)||(26533614-26533686)
chr6 (116-213)||(4440354-4440451)
chr6 (137-186)||(30832951-30833000)
[»] chr3 (3 HSPs)
chr3 (107-218)||(30761385-30761496)
chr3 (1-33)||(25437274-25437306)
chr3 (1-36)||(37252329-37252364)
[»] chr8 (5 HSPs)
chr8 (109-218)||(31378985-31379094)
chr8 (1-33)||(5769506-5769538)
chr8 (108-160)||(24471733-24471785)
chr8 (1-33)||(24471860-24471892)
chr8 (1-41)||(11071977-11072017)
[»] scaffold0323 (1 HSPs)
scaffold0323 (110-218)||(11594-11702)
[»] chr4 (5 HSPs)
chr4 (109-218)||(23143517-23143626)
chr4 (110-174)||(34707976-34708040)
chr4 (1-33)||(8371096-8371128)
chr4 (1-33)||(43041605-43041637)
chr4 (108-160)||(43041712-43041764)
[»] chr1 (2 HSPs)
chr1 (110-174)||(41871185-41871249)
chr1 (108-160)||(4325576-4325628)
[»] scaffold1234 (1 HSPs)
scaffold1234 (1-33)||(1035-1067)
[»] scaffold0405 (1 HSPs)
scaffold0405 (1-41)||(11824-11864)


Alignment Details
Target: scaffold0063 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 67721 - 67830
Alignment:
Q  107 ggagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagac 206  Q
    |||||| ||||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  67721 ggagttaatgttggtacattgcgaaaaattttcttgtatacaacattcgaagtgctatccatgctaacaccattctcatcggtgattagaatcttcaaac 67820  T
Q  207 cactccttga 216  Q
    ||||||||||    
T  67821 cactccttga 67830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 11002884 - 11002994
Alignment:
Q  108 gagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagacc 207  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| || |||| ||||||||||||    
T  11002884 gagttcatgttggtacattgcgaaaaatttccttgtaaacaacattcgaagtgctatccatgctaacaccattctcatcagtcattaaaatcttcagacc 11002983  T
Q  208 actccttgatg 218  Q
    |||||||||||    
T  11002984 actccttgatg 11002994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 216
Target Start/End: Original strand, 8026755 - 8026855
Alignment:
Q  115 tgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagaccactcctt 214  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||||||||| |||||| |||||| ||||||||||||||||| | |||||||||||||    
T  8026755 tgttggtacattgcgaaaaaattccttgtatacaacattcgaagtgctatcc-tgctaataccattctcatcggtgattagaatatccagaccactcctt 8026853  T
Q  215 ga 216  Q
    ||    
T  8026854 ga 8026855  T

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Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 15494482 - 15494591
Alignment:
Q  109 agttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagacca 208  Q
    |||||||||||| | | |||||||||||||||| || || ||||| || ||||||||||||  ||| |||||||||||||| |||| |||||| ||||||    
T  15494482 agttcatgttggcaaattgcgaaaaatttccttataaaccacattagatgtgctatccatggaaactccattatcatcggtcattaaaatctttagacca 15494581  T
Q  209 ctccttgatg 218  Q
    |  |||||||    
T  15494582 cctcttgatg 15494591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 33868445 - 33868393
Alignment:
Q  108 gagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtg 160  Q
    ||||||||||| ||||| |||| |||||||| ||||| |||||||||||||||    
T  33868445 gagttcatgttagtacattgcggaaaatttctttgtaaacaacatttgaagtg 33868393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 40
Target Start/End: Original strand, 8026650 - 8026681
Alignment:
Q  9 gcacgggtcatattgacggcaaatagaacatt 40  Q
    ||||||||||||||||||||||||||||||||    
T  8026650 gcacgggtcatattgacggcaaatagaacatt 8026681  T

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Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 213
Target Start/End: Original strand, 20912585 - 20912682
Alignment:
Q  116 gttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagaccactcct 213  Q
    ||||||| | |||| ||||| |||||||| || ||||| |||||||||||||||||    ||||| ||||| || |||| ||| |||| |||||||||    
T  20912585 gttggtagattgcggaaaatctccttgtaaactacattcgaagtgctatccatgcttttgccattctcatcagtcattaaaatattcaaaccactcct 20912682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11674359 - 11674319
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaatagaacattc 41  Q
    |||||||||||||||||||||||| |||||| | |||||||    
T  11674359 gtgctgccgcacgggtcatattgatggcaaacaaaacattc 11674319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 107 - 205
Target Start/End: Complemental strand, 24125321 - 24125223
Alignment:
Q  107 ggagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcaga 205  Q
    |||||||||||||||||| ||||||||||||||||| | |||| ||| ||||| |||||||||||||||||||| |||||||| |||||||||||||||    
T  24125321 ggagttcatgttggtacattgcgaaaaatttccttgcaaacaatattcgaagttctatccatgctaacaccattctcatcggttattagaatcttcaga 24125223  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24125429 - 24125389
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaatagaacattc 41  Q
    ||||||||||||| ||||||| |||||||||||||| ||||    
T  24125429 gtgctgccgcacgtgtcatatcgacggcaaatagaatattc 24125389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 6e-27; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 26533573 - 26533464
Alignment:
Q  108 gagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagacc 207  Q
    ||||||||| ||||||| |||| |||||||| ||||| |||||||||||||| |||| ||||||||||||||| ||| | || |||||||| ||||||||    
T  26533573 gagttcatgctggtacattgcggaaaatttctttgtaaacaacatttgaagtactattcatgctaacaccattctcaccagtcattagaatattcagacc 26533474  T
Q  208 actccttgat 217  Q
    ||||||||||    
T  26533473 actccttgat 26533464  T

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Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 31449936 - 31449825
Alignment:
Q  107 ggagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagac 206  Q
    |||||||||||| ||| | | ||||||||||| ||||| |||||||| |||||| ||||||||||||||||||| |||| ||| ||||||||||||||||    
T  31449936 ggagttcatgtttgtaaattacgaaaaatttctttgtaaacaacattcgaagtgttatccatgctaacaccattctcattggtcattagaatcttcagac 31449837  T
Q  207 cactccttgatg 218  Q
    || || ||||||    
T  31449836 cattctttgatg 31449825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 108 - 180
Target Start/End: Complemental strand, 26533686 - 26533614
Alignment:
Q  108 gagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccatt 180  Q
    ||||||||| ||||||| |||| |||||||| ||||| |||||||||||||| |||| |||||||||||||||    
T  26533686 gagttcatgctggtacattgcggaaaatttctttgtaaacaacatttgaagtactattcatgctaacaccatt 26533614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 4440451 - 4440354
Alignment:
Q  116 gttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagaccactcct 213  Q
    ||||||| | |||| ||||| |||||||| || |||||||||||| ||||||||||    ||||| |||||||| |||| |||  ||| |||||||||    
T  4440451 gttggtagattgcggaaaatctccttgtaaactacatttgaagtgttatccatgcttttgccattctcatcggtcattaaaatactcaaaccactcct 4440354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 186
Target Start/End: Original strand, 30832951 - 30833000
Alignment:
Q  137 tccttgtatacaacatttgaagtgctatccatgctaacaccattatcatc 186  Q
    |||| ||| |||||||| || ||||||||||||||||||||||| |||||    
T  30832951 tcctcgtaaacaacattcgacgtgctatccatgctaacaccattctcatc 30833000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 30761385 - 30761496
Alignment:
Q  107 ggagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagac 206  Q
    ||||||| |||||||||| ||||||||||||| ||||| |||||| | ||| |||||||||||||||||||||| |||||  | ||||||||||||||||    
T  30761385 ggagttcgtgttggtacattgcgaaaaatttctttgtaaacaacaatcgaaatgctatccatgctaacaccattctcatcaatcattagaatcttcagac 30761484  T
Q  207 cactccttgatg 218  Q
    || || ||||||    
T  30761485 cattctttgatg 30761496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 25437306 - 25437274
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaata 33  Q
    |||||||||||||||||||||||||||||||||    
T  25437306 gtgctgccgcacgggtcatattgacggcaaata 25437274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 37252329 - 37252364
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaatagaa 36  Q
    ||||||| ||||||||||||||||||||||||||||    
T  37252329 gtgctgctgcacgggtcatattgacggcaaatagaa 37252364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 9e-20; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 109 - 218
Target Start/End: Complemental strand, 31379094 - 31378985
Alignment:
Q  109 agttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagacca 208  Q
    |||||||||||||| | |||||||||||||||| || || ||||| || ||||||||||||  ||| |||||||||||||| |||| |||||| ||||||    
T  31379094 agttcatgttggtaaattgcgaaaaatttccttataaaccacattagatgtgctatccatggaaactccattatcatcggtcattaaaatctttagacca 31378995  T
Q  209 ctccttgatg 218  Q
    |  |||||||    
T  31378994 cctcttgatg 31378985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 5769506 - 5769538
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaata 33  Q
    |||||||||||||||||||||||||||||||||    
T  5769506 gtgctgccgcacgggtcatattgacggcaaata 5769538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 24471785 - 24471733
Alignment:
Q  108 gagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtg 160  Q
    ||||||||||||||||| |||  |||||||| ||||| |||||||||||||||    
T  24471785 gagttcatgttggtacattgcataaaatttctttgtaaacaacatttgaagtg 24471733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 24471892 - 24471860
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaata 33  Q
    |||||||||||||||||||||||||||||||||    
T  24471892 gtgctgccgcacgggtcatattgacggcaaata 24471860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11071977 - 11072017
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaatagaacattc 41  Q
    ||||||||||||||||||||||||| || ||||||| ||||    
T  11071977 gtgctgccgcacgggtcatattgacagccaatagaatattc 11072017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0323 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 218
Target Start/End: Complemental strand, 11702 - 11594
Alignment:
Q  110 gttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagaccac 209  Q
    |||| |||||||||| |||||||| |||| | ||| |||||| | ||| |||||||||||||||||||||| || ||  | ||||||||||||||||||     
T  11702 gttcgtgttggtacattgcgaaaagtttcttcgtaaacaacaatcgaaatgctatccatgctaacaccattctcgtcaatcattagaatcttcagaccat 11603  T
Q  210 tccttgatg 218  Q
    |||||||||    
T  11602 tccttgatg 11594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 46; Significance: 2e-17; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 109 - 218
Target Start/End: Original strand, 23143517 - 23143626
Alignment:
Q  109 agttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaacaccattatcatcggtgattagaatcttcagacca 208  Q
    |||||||||||| | | |||||||||||||||| || || ||||| || ||||||||||||  ||| |||||||||||||| |||| |||||| ||||||    
T  23143517 agttcatgttggcaaattgcgaaaaatttccttataaaccacattagatgtgctatccatggaaactccattatcatcggtcattaaaatctttagacca 23143616  T
Q  209 ctccttgatg 218  Q
    |  |||||||    
T  23143617 cctcttgatg 23143626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 34708040 - 34707976
Alignment:
Q  110 gttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaac 174  Q
    ||||||| ||||||| ||||||||| ||||||||| ||||||||||| ||| |||||||||||||    
T  34708040 gttcatgctggtacattgcgaaaaaattccttgtagacaacatttgatgtgttatccatgctaac 34707976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 8371096 - 8371128
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaata 33  Q
    |||||||||||||||||||||||||||||||||    
T  8371096 gtgctgccgcacgggtcatattgacggcaaata 8371128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 43041605 - 43041637
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaata 33  Q
    |||||||||||||||||||||||||||||||||    
T  43041605 gtgctgccgcacgggtcatattgacggcaaata 43041637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 43041712 - 43041764
Alignment:
Q  108 gagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtg 160  Q
    ||||||||||||||||| |||| |||||||| ||||| |||| ||||||||||    
T  43041712 gagttcatgttggtacattgcggaaaatttctttgtaaacaatatttgaagtg 43041764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 41871249 - 41871185
Alignment:
Q  110 gttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtgctatccatgctaac 174  Q
    ||||||| ||||||| ||||||||| ||||||||| ||||||||||| ||| |||||||||||||    
T  41871249 gttcatgctggtacattgcgaaaaaattccttgtagacaacatttgatgtgttatccatgctaac 41871185  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 4325576 - 4325628
Alignment:
Q  108 gagttcatgttggtacactgcgaaaaatttccttgtatacaacatttgaagtg 160  Q
    ||||||||||||||||| || | |||||||| ||||| |||||| ||||||||    
T  4325576 gagttcatgttggtacattgtggaaaatttctttgtaaacaacacttgaagtg 4325628  T

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Target: scaffold1234 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1234
Description:

Target: scaffold1234; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 1067 - 1035
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaata 33  Q
    |||||||||||||||||||||||||| ||||||    
T  1067 gtgctgccgcacgggtcatattgacgacaaata 1035  T

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Target: scaffold0405 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11824 - 11864
Alignment:
Q  1 gtgctgccgcacgggtcatattgacggcaaatagaacattc 41  Q
    |||||| |||||||||||||||||||||||| | |||||||    
T  11824 gtgctgtcgcacgggtcatattgacggcaaacaaaacattc 11864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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