View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17836_low_43 (Length: 281)
Name: NF17836_low_43
Description: NF17836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17836_low_43 |
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Alignment Details
Target: chr2 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 18 - 266
Target Start/End: Original strand, 41104019 - 41104267
Alignment:
| Q |
18 |
gtttctatgttttcatcaactattgcgtctgagaatgttttgttttgtggtgatggtaacggtgatgatgatttgggtggtgatggtttgaagaaaaaga |
117 |
Q |
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| T |
41104019 |
gtttctatgttttcatcaactattgcgtctgagaatgttttgttttgtggtgatggtaacggtgatgatgatttgggtggtgatggtttgaagaaaaaga |
41104118 |
T |
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| Q |
118 |
agtttctaggtttagacattattgaagggtttatttgtgtgtgattaattaatgtgtttgttgaggttttaaagttgagtttgtgaagtgcttttttcta |
217 |
Q |
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| T |
41104119 |
agtttctaggtttagacattattgaagggtttatttgtgtgtgattaattaatgtgtttgttgaggttttaaagttgagtttgtgaagtgcttttttcta |
41104218 |
T |
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| Q |
218 |
gtttggagtgttgggggttgaagggtttttatagaagtggaacatttga |
266 |
Q |
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| T |
41104219 |
gtttggagtgttgggggttgaagggtttttatagaagtggaacatttga |
41104267 |
T |
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