View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17837_low_28 (Length: 375)
Name: NF17837_low_28
Description: NF17837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17837_low_28 |
 | |
|
Alignment Details
Target: chr3 (Bit Score: 318; Significance: 1e-179; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 10 - 359
Target Start/End: Original strand, 54346747 - 54347096
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
54346747 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatggaaatattcctgttttagtttaccg |
54346846 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
54346847 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgctgattggctcgctaatttaagcatttct |
54346946 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
54346947 |
acagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctttttgatgatttatccggggcttacatgcctaggaatgttc |
54347046 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
54347047 |
gattaacttcttaattttgtttttttttgggctttgccctctcttgtacc |
54347096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 10 - 331
Target Start/End: Complemental strand, 27156354 - 27156033
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
27156354 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagtttaatgggaatattcctgttttagtttaccg |
27156255 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |
|
|
| T |
27156254 |
gatccggaagctgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaataggagtgctgattggctcgctaatttcagcatttct |
27156155 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
27156154 |
acagatcattttaattttctagtgttggagtctcctccttgtgaggtcaaaagaatcctttttaatgatttatccggagcttgcatgcctaggaacgttc |
27156055 |
T |
|
| Q |
310 |
gattaacttcttaattttgttt |
331 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
27156054 |
gattaacttcttaagtttgttt |
27156033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 39 - 315
Target Start/End: Original strand, 43812988 - 43813263
Alignment:
| Q |
39 |
tcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccggaagctgctgaagatgagttgga |
138 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||||||||| |||| ||| || || |||||||||| | |
|
|
| T |
43812988 |
tcaaagattttgatcgatatgatttctgataatttcaaatgtaatggcaatattcatgttttagtttaccggatccaaaagttgttgcagatgagttgaa |
43813087 |
T |
|
| Q |
139 |
atgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatcattttaattttcttgtgctgga |
238 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||| |||||| |||||| |||||||| |||||||||||| ||||| |||||||| | || || | |
|
|
| T |
43813088 |
atgttcaactcaaccataattggcgtgaaggaaattggagtgctgattgactcgctaacttaagcatttctatagatc-gtttaatttgttgttgttgaa |
43813186 |
T |
|
| Q |
239 |
gtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaa |
315 |
Q |
| |
|
|||||||||| |||||||| || | || | |||||||||||||||| | ||| |||||||||||||||||||||| |
|
|
| T |
43813187 |
gtctcctcctagtgaggtccaataactcatttttgatgatttatccgtagtttgtatgcctaggaatgttcgattaa |
43813263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 46428575 - 46428916
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||| || ||||||||||| ||| |||||||| | |||||| || |
|
|
| T |
46428575 |
tcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacaagttcaagtttaatgggaatatgcctattttagttcatcgtatcagg |
46428674 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatc |
216 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||| ||||||||||| |||||||||||| |||| |||||||| |||||||| ||||||| | ||| |
|
|
| T |
46428675 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcatgaaggaaatagaagtgccgattggcttgctaattttagcatttatgtgaatc |
46428774 |
T |
|
| Q |
217 |
attttaattttcttgtgctggagtctcctccttgtgag-gtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaa |
315 |
Q |
| |
|
|||| ||||| || | ||||| |||||||| |||| || |||| || | ||||||||| | |||| ||||||||||||||||||||| || |||| |
|
|
| T |
46428775 |
atttgaatttgattattttggagactcctcctattgagcttcgaaag-ctcatgtttgatgatatttccgaggcttgcatgcctaggaatgtccgtttaa |
46428873 |
T |
|
| Q |
316 |
cttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||| | | ||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
46428874 |
tttcgt-agtttcttttctcttgggctttgccctcttttgtacc |
46428916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 17 - 359
Target Start/End: Complemental strand, 54812428 - 54812087
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||||| | ||||| || ||||||||| | ||| |||||||| | |||||| || |
|
|
| T |
54812428 |
tcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcagg |
54812329 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatc |
216 |
Q |
| |
|
|||||||||| ||| || | |||| ||| ||| |||||||||||||||||||||||| |||| |||||||| |||||||| ||||||||| ||| |
|
|
| T |
54812328 |
aagctgctgagaatggattagcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaatc |
54812229 |
T |
|
| Q |
217 |
attttaattttcttgtgctggagtctcctccttgtgag-gtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaa |
315 |
Q |
| |
|
|||| ||||| || | |||| |||||||| |||| || |||| || | ||||||||| | ||| |||||||||||||||||||||| || |||| |
|
|
| T |
54812228 |
atttgaatttgattatttcggagactcctcctattgagcttcgaaag-ctcatgtttgatgatatttcccgggcttgcatgcctaggaatgtccggttaa |
54812130 |
T |
|
| Q |
316 |
cttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||| | ||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
54812129 |
tttc-gcagtttcttttcttttgggctttgccctctattgtacc |
54812087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 42794505 - 42794846
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||| | || ||||| || ||||||||||| ||| |||||||| | |||||| || |
|
|
| T |
42794505 |
tcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctaacaagttcaagtttaatgggaatatgcctattttagttcatcgtatcagg |
42794604 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatc |
216 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||| |||||||||||||||||||||||| |||| |||||||| |||||||| || || | | ||| |
|
|
| T |
42794605 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagaatatatgtgaatc |
42794704 |
T |
|
| Q |
217 |
attttaattttcttgtgctggagtctcctccttgtgag-gtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaa |
315 |
Q |
| |
|
|||| ||||| || | ||||| |||||||| |||| || |||| || | ||||||||| | ||||||||||||| |||||||||||| || |||| |
|
|
| T |
42794705 |
atttgaatttgattattttggagactcctcctattgagcttcgaaag-ctcatgtttgatgatatttccggggcttgcacgcctaggaatgtgcggttaa |
42794803 |
T |
|
| Q |
316 |
cttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||| | | ||| |||||| ||||||||||||||| ||||||| |
|
|
| T |
42794804 |
tttcgt-agtttcttttctcctgggctttgccctcttttgtacc |
42794846 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 14 - 133
Target Start/End: Complemental strand, 51841377 - 51841259
Alignment:
| Q |
14 |
ttctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatc |
113 |
Q |
| |
|
|||||||||||||||||| ||||| |||||| | ||||||||||| | |||||| |||||||| ||||| |||| ||| ||| |||||||| | |||||| |
|
|
| T |
51841377 |
ttctcatcttatagtggagagtgactcaaagttattgatcgacat-acttctgacaatttcaatttcaaagggactatccctattttagttgagcgtatc |
51841279 |
T |
|
| Q |
114 |
cggaagctgctgaagatgag |
133 |
Q |
| |
|
|| ||| | ||||||||||| |
|
|
| T |
51841278 |
cgaaaggttctgaagatgag |
51841259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 43912432 - 43912322
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
|||||||||||| |||||||| |||||||| |||||| ||||||||||||| || ||||| || ||||||||||| || |||||| | | |||||| || |
|
|
| T |
43912432 |
tcatcttatagttgaaagtgactcaaagatattgatcaacatgatttctgagaagttcaagtttaatgggaatatctctattttagctcatcgtatcagg |
43912333 |
T |
|
| Q |
117 |
aagctgctgaa |
127 |
Q |
| |
|
|||||| |||| |
|
|
| T |
43912332 |
aagctgttgaa |
43912322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 37503012 - 37503068
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
||||| |||||||||| ||||| |||||||||||| ||||||||||| |||| |||| |
|
|
| T |
37503012 |
ctcattttatagtggagagtgactcaaagattttggtcgacatgattactgaaaatt |
37503068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 321 - 359
Target Start/End: Complemental strand, 52726527 - 52726489
Alignment:
| Q |
321 |
taattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
52726527 |
taattttattttcttttaggctttgccctctcttgtacc |
52726489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 43328885 - 43328829
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||| ||||||| ||| |||| |||| |
|
|
| T |
43328885 |
ctcatcttatagtggagagtgactcaaagatcttggtcgacataattactgaaaatt |
43328829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 301; Significance: 1e-169; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 10 - 358
Target Start/End: Complemental strand, 8019931 - 8019584
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
8019931 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatattcctgttttagtttaccg |
8019832 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||| |
|
|
| T |
8019831 |
tatccggaatctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgctgattggctcgctaatttaagtaattct |
8019732 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
8019731 |
acagatca-tttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctttttgatgatttatccgggacttgcatgcctaagaatgttc |
8019633 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtac |
358 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8019632 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtac |
8019584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 10 - 354
Target Start/End: Original strand, 48618946 - 48619290
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||| | |
|
|
| T |
48618946 |
attactcttatcttatagtggaaagtgattcaaagattttgattgacatgatttctgataatttcaagtttaatgggaatattcctgttttagtttactg |
48619045 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
48619046 |
tatccggaagctgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaataagagtgctgattggctcgctaatttaagcatttct |
48619145 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
|| |||||||||||||||| ||| ||||||||||||||| |||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
48619146 |
acaaatcattttaattttctagtgttggagtctcctccttctgagatcaaaagaatcctttttgatgatttatccggggcttgcatgcttaggaatgttc |
48619245 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctctt |
354 |
Q |
| |
|
||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
48619246 |
gattagcttcttaattttgttttcttttgagctttgccctctctt |
48619290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 19 - 359
Target Start/End: Complemental strand, 29213907 - 29213567
Alignment:
| Q |
19 |
atcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccggaa |
118 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| || |||| |||| ||| |
|
|
| T |
29213907 |
atcttgtagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatggaaatatttctgttttacttcaccggatccagaa |
29213808 |
T |
|
| Q |
119 |
gctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaata-ggagtgatgattggctcgctaatttaagcatttcttcagatca |
217 |
Q |
| |
|
||| ||||||||||||||||||||||||||| |||||||||||||||| |||| | |||||| |||||| ||||||||||||||||||||| ||||||| |
|
|
| T |
29213807 |
gctattgaagatgagttggaatgttcaactcaaccatacttggcgtgaaagaaaaaaggagtgttgattgactcgctaatttaagcatttctacagatca |
29213708 |
T |
|
| Q |
218 |
ttttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaact |
317 |
Q |
| |
|
||||||||||||||| |||||||||||||| |||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
29213707 |
ctttaattttcttgtgttggagtctcctcctagtgaggtccaaagaatcttttttgatgatttatcctgggcttgcatgcctaggaatgttcgattagct |
29213608 |
T |
|
| Q |
318 |
tcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
| ||| ||||||||| | ||| ||||||||||||||| |||| |
|
|
| T |
29213607 |
tgttagttttgtttt-tgttgagctttgccctctcttatacc |
29213567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 24473467 - 24473659
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||| || ||||||||||| ||| |||||||| | |||||| || |
|
|
| T |
24473467 |
tcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacaagttcaagtttaatgggaatatgcctattttagttcatcgtatcagg |
24473566 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||| |||||||||||||||||||||||| |||| |||||||| |||||||| ||||||||| |
|
|
| T |
24473567 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttct |
24473659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 97 - 209
Target Start/End: Original strand, 24468599 - 24468711
Alignment:
| Q |
97 |
ttttagtttaccgtatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaa |
196 |
Q |
| |
|
|||||||| | |||||| |||||||||||| ||| |||| |||| ||| ||| |||||||||||||||||||||||| |||| |||||||| ||||| |
|
|
| T |
24468599 |
ttttagttcatcgtatcaggaagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaa |
24468698 |
T |
|
| Q |
197 |
tttaagcatttct |
209 |
Q |
| |
|
||| ||||||||| |
|
|
| T |
24468699 |
ttttagcatttct |
24468711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 46045830 - 46045886
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| ||||||||||| |||| |||| |
|
|
| T |
46045830 |
ctcatcttatagtggagagtgactcaaagattttggtcgacatgattactgaaaatt |
46045886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 359
Target Start/End: Original strand, 8035888 - 8035977
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||| | |||||||||||||||||||| || || | |||| |||||| |||| |||| |||| |||||||||||| ||||||| |
|
|
| T |
8035888 |
tttgatgatatttccggggcttgcatgcctagaaacgtcagtttaatttcttagttttctttttctttgagctttgccctcttttgtacc |
8035977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 359
Target Start/End: Original strand, 24468772 - 24468860
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||| | ||||||||||| ||||| |||||||| || |||| ||| || ||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
24468772 |
tttgatgatatttccggggcttgaatgccgaggaatgtccggttaatttcgtagtttc-ttttctcttgggctttgccctcttttgtacc |
24468860 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 359
Target Start/End: Original strand, 24473720 - 24473808
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||| | ||||||||||| ||||| |||||||| || |||| ||| || ||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
24473720 |
tttgatgatatttccggggcttgaatgccgaggaatgtccggttaatttcgtagtttc-ttttctcttgggctttgccctcttttgtacc |
24473808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 38110858 - 38110802
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||| ||||||||||| |||| |||| |
|
|
| T |
38110858 |
ctcatcttatagtggagagtgactcaaagatattggtcgacatgattactgaaaatt |
38110802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 8035635 - 8035690
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
||||||||||||||| ||||| |||||||| ||| ||||||||||| |||| |||| |
|
|
| T |
8035635 |
tcatcttatagtggagagtgactcaaagatcttggtcgacatgattactgaaaatt |
8035690 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 8035768 - 8035826
Alignment:
| Q |
150 |
acccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttc |
208 |
Q |
| |
|
|||||||||||||||||||| || || |||| |||||||| |||||||| |||||||| |
|
|
| T |
8035768 |
acccatacttggcgtgaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
8035826 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 359
Target Start/End: Original strand, 5350169 - 5350258
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||| | ||| || |||| ||||||||||| || || |||| | |||| |||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
5350169 |
tttgatgatatttccaggacttgtatgcctaggaacgtccgtttaattccttagttttctttttctttgggctttgccctcttttgtacc |
5350258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 292; Significance: 1e-164; HSPs: 15)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 10 - 357
Target Start/End: Original strand, 23949710 - 23950056
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
23949710 |
attaatctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatattcctgttttagtttaccg |
23949809 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
23949810 |
tatccggaagctgctgaagatgagttagaatgttcaactcaaccatacttggcgtgaaggaaataggagtgctgattggctcgctaatttaagcatttct |
23949909 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
23949910 |
acagatcattttaattttattgtgttggagtctcctccttgtgaggtcaaaagaatcatttttgatgatttatccggggtttgcatgcctaggaatgttc |
23950009 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgta |
357 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
23950010 |
gattaacttcttaattttgttttcttttgggcttt-acctctcttgta |
23950056 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 10 - 357
Target Start/End: Original strand, 5308654 - 5309001
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
5308654 |
attactctcatcttatagtggaaagtgaatcaaagattttgatcgacatgatttctgataatttcaagttcaatggaaatattcctgttttagtttaccg |
5308753 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5308754 |
tatccggaatctgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaataggagtgctgattggctcgctaatttaagcatttct |
5308853 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
|| |||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
5308854 |
acatatcattttaattttcttgtgttggagtctcctccttgtgaggtcaaaagaatcatttttgatgatttatccaggacttgcatgcctaggaatgttc |
5308953 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgta |
357 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
5308954 |
gattaacttcttaattttgtttacttttgggctttgccctctcttgta |
5309001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 45 - 359
Target Start/End: Original strand, 42677238 - 42677552
Alignment:
| Q |
45 |
attttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccggaagctgctgaagatgagttggaatgttc |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42677238 |
attttgatcgacatgatttctgataatttcaagttcaatggaaatattcctgttttagtttaccgtatccggaagctgctgaagatgagttggaatgttc |
42677337 |
T |
|
| Q |
145 |
aactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatcattttaattttcttgtgctggagtctcc |
244 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||| ||| |||||||||| |
|
|
| T |
42677338 |
aactcaaccatacttggcgtgaaggaaataggagtgctgattggctcgctaatttaagcatttctacagatctttttaattttctagtgttggagtctcc |
42677437 |
T |
|
| Q |
245 |
tccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggcttt |
344 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42677438 |
tccttgtgaggtcaaaagaatcctttttgatgatttatctggggcttgcatgcctaggaatattcgattaacttcttaattttgttttcttttgggcttt |
42677537 |
T |
|
| Q |
345 |
gccctctcttgtacc |
359 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
42677538 |
gccctctcttgtacc |
42677552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 15 - 355
Target Start/End: Complemental strand, 23085092 - 23084754
Alignment:
| Q |
15 |
tctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatcc |
114 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
23085092 |
tctcatcttatagtggaaagtgatttaaagattttgatcgacatgatttttgataatttcaagttcaatgggaatattcatgttttagtttaccggatcc |
23084993 |
T |
|
| Q |
115 |
ggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcaga |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| | | |
|
|
| T |
23084992 |
ggaagctgctgaagatgagttggaatgttcaactcaaccatatttggcgtgaaggaaataggagtgctgattggctcgctaatttaagcatttctacgta |
23084893 |
T |
|
| Q |
215 |
tcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgatta |
314 |
Q |
| |
|
||||||||||||||| ||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
23084892 |
tcattttaattttctagtgttggagtctcctccttgtgaggtcaaaataatcatttttgatgatttatccggagcttgcatacctaggaatgttcgatta |
23084793 |
T |
|
| Q |
315 |
acttcttaattttgttttcttttgggctttgccctctcttg |
355 |
Q |
| |
|
||| ||||||||| ||| |||||||||||||||||||||| |
|
|
| T |
23084792 |
actccttaattttattt--ttttgggctttgccctctcttg |
23084754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 10 - 358
Target Start/End: Complemental strand, 50952754 - 50952404
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
50952754 |
attactctaatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatattcatgttttagtttaccg |
50952655 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
50952654 |
gatccggaagctgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaagaaaataggagtgctgattggctcgctaatataagcatttct |
50952555 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggt--caaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgt |
307 |
Q |
| |
|
|||||| |||||||||||| ||| |||||| |||||||||||| | ||||| ||| | ||| |||||||||| ||||||||||| ||||||||||| |
|
|
| T |
50952554 |
acagatctttttaattttctagtgttggagtatcctccttgtgaaattaaaaaagtatcattttttatgatttatctggggcttgcatacctaggaatgt |
50952455 |
T |
|
| Q |
308 |
tcgattaacttcttaattttgttttcttttgggctttgccctctcttgtac |
358 |
Q |
| |
|
||||||| |||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
50952454 |
tcgattagcttcttaattttgttttcttttggactttgccctctcttgtac |
50952404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 14 - 359
Target Start/End: Complemental strand, 34554055 - 34553711
Alignment:
| Q |
14 |
ttctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatc |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||||||||| || |||||||| || | ||| |
|
|
| T |
34554055 |
ttctcatcttatagtggaaagtgattcaaagatttttatcgacatgatttctgataattttgaatttgatgggaatatttctattttagttcactggatc |
34553956 |
T |
|
| Q |
114 |
cggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcag |
213 |
Q |
| |
|
| |||| ||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| |||| |||||| ||||||||||||| ||||| | || |
|
|
| T |
34553955 |
cagaagatgctgaagatgagttagaatgttcaactcaaccatacttggtgtgaaggaaatagaagtgctgattgactcgctaatttaaacatttatacat |
34553856 |
T |
|
| Q |
214 |
atcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgatt |
313 |
Q |
| |
|
|||| ||||||||||||||| |||||||||||||| |||||||| ||| |||||| ||||||||||||||| | ||||||||||||| |||||||||||| |
|
|
| T |
34553855 |
atcactttaattttcttgtgttggagtctcctcctagtgaggtccaaaaaatcctttttgatgatttatccagagcttgcatgcctatgaatgttcgatt |
34553756 |
T |
|
| Q |
314 |
aacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
| ||| ||| |||| |||| ||||||||||||| |||||||||||| |
|
|
| T |
34553755 |
agcttgttagtttt-tttttttttgggctttgctctctcttgtacc |
34553711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 359
Target Start/End: Complemental strand, 22065381 - 22065040
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||| || ||||||||| | ||| |||||||| | |||||| || |
|
|
| T |
22065381 |
tcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacaagttcaagtttaatgggaatgtgcctattttagttcatcgtatcagg |
22065282 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatc |
216 |
Q |
| |
|
| |||||||| ||| |||| |||| ||| ||| |||||||||||||||||||||||| |||| |||||||| |||||||| ||||| ||| ||| |
|
|
| T |
22065281 |
aggctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatatctgtgaatc |
22065182 |
T |
|
| Q |
217 |
attttaattttcttgtgctggagtctcctccttgtgag-gtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaa |
315 |
Q |
| |
|
|||| ||||| || | ||||| |||||||| |||| || |||| || | ||||||||| | |||||||||||||||||||||||||| || |||| |
|
|
| T |
22065181 |
atttgaatttgattattttggagactcctcctattgagcttcgaaag-ctcatgtttgatgatatttccggggcttgcatgcctaggaatgtccggttaa |
22065083 |
T |
|
| Q |
316 |
cttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||| | | ||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
22065082 |
tttcgt-agtttcttttctcttgggctttgccctctattgtacc |
22065040 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 20 - 142
Target Start/End: Original strand, 2601205 - 2601326
Alignment:
| Q |
20 |
tcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccggaag |
119 |
Q |
| |
|
||||||||||||||||||||| ||||| || |||||||||| |||||| || ||||| || |||| |||||| || |||||||| || |||| |||| |
|
|
| T |
2601205 |
tcttatagtggaaagtgattctaagatatt-atcgacatgaattctgacaaattcaagtttaatgagaatataactattttagttcactatatcatgaag |
2601303 |
T |
|
| Q |
120 |
ctgctgaagatgagttggaatgt |
142 |
Q |
| |
|
|||||||| |||| |||| |||| |
|
|
| T |
2601304 |
ctgctgaacatgaattgggatgt |
2601326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 305 - 359
Target Start/End: Original strand, 23723127 - 23723181
Alignment:
| Q |
305 |
tgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||| |||| |||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
23723127 |
tgttcaattagcttcttaattctgttttctttttggctttgccctctcttgtacc |
23723181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 6293939 - 6293995
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| ||||||||||| |||| |||| |
|
|
| T |
6293939 |
ctcatcttatagtggagagtgactcaaagattttggtcgacatgattactgaaaatt |
6293995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 16854872 - 16854932
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaa |
76 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||| ||||||||||| || | |||||||| |
|
|
| T |
16854872 |
ctcatcttatagtggagagtgactcaaagatcttggtcgacatgattactaaaaatttcaa |
16854932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 359
Target Start/End: Original strand, 16855136 - 16855211
Alignment:
| Q |
284 |
cggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||||||| | ||||| || || |||| |||||| |||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
16855136 |
cggggcttgcatgtcaaggaacgtccgtttaatttcttagttttctttttctttgggctttgccctcttttgtacc |
16855211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 16 - 67
Target Start/End: Original strand, 28705914 - 28705965
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctga |
67 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||| ||||||||||| |||| |
|
|
| T |
28705914 |
ctcatcttatagtggagagtgaatcaaagatcttggtcgacatgattactga |
28705965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 336
Target Start/End: Original strand, 6294193 - 6294259
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttt |
336 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||| || || |||| |||||| |||| ||| |||| |
|
|
| T |
6294193 |
tttgatgatatttccggggcttgcatgcctaggaacgtccgtttaatttcttagttttctttccttt |
6294259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 38168268 - 38168202
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttt |
336 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||| || || |||| |||||| |||| ||| |||| |
|
|
| T |
38168268 |
tttgatgatatttccggggcttgcatgcctaggaacgtccgtttaatttcttagttttctttccttt |
38168202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 290; Significance: 1e-163; HSPs: 14)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 290; E-Value: 1e-163
Query Start/End: Original strand, 10 - 359
Target Start/End: Original strand, 13186900 - 13187248
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
13186900 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatggaaatattcctgttttagtttaccg |
13186999 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
13187000 |
tatccggaagctgctgaagacgagttggaatgttcaactcaatcatacttggcgtgaaggaaataggagtgctgattggctcgctaatttaagcatttct |
13187099 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
|| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13187100 |
acatatcattttaattttattgtgttggagtctcctccttgtgaggtc-aaagaatcctttttgatgatttattcggggcttgcatgcctaggaatgttc |
13187198 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13187199 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
13187248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 96 - 359
Target Start/End: Complemental strand, 40426268 - 40426005
Alignment:
| Q |
96 |
gttttagtttaccgtatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgcta |
195 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||| ||||||| |
|
|
| T |
40426268 |
gttttagtttaccgtatccggaagctgctgaagatgagttggaatgttcaactcacccatatttggtgtgaaggaaataggagtgctgattgactcgcta |
40426169 |
T |
|
| Q |
196 |
atttaagcatttcttcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcat |
295 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
40426168 |
atttaagcatttctacagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcttttttgatgatttatccggggcttgcat |
40426069 |
T |
|
| Q |
296 |
gcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
40426068 |
gcctaggaatgttcgattaacttcttaatcttgttttcttttgggctttgccctctcttgtacc |
40426005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 10 - 250
Target Start/End: Complemental strand, 7305267 - 7305027
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||| ||||||| |
|
|
| T |
7305267 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctaataatttcaagttcaatgagaatattcctgttttactttaccg |
7305168 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
7305167 |
gatccggaacctgctgaagatgagttggaattttcaactcaaccatacttggcgtgaaggaaataggagtgctgattggctctctaatttaagcatttct |
7305068 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttg |
250 |
Q |
| |
|
||||||| ||||||||||| ||| |||||||||||||||| |
|
|
| T |
7305067 |
acagatcactttaattttctagtgttggagtctcctccttg |
7305027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 69 - 359
Target Start/End: Original strand, 6598990 - 6599281
Alignment:
| Q |
69 |
aatttcaaattcaatgggaatattcctgttttagtttaccgtatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaag |
168 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
6598990 |
aatttcaagttcaatgggaatattcctgttttagttcaccggatccggaagttgctgaagatgaattggaatgttcaactcaaccataattggcgtgaag |
6599089 |
T |
|
| Q |
169 |
gaaataggagtgatgattggctcgctaatttaagcatttcttcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcct |
268 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||||||| || |||| ||| ||||| | ||| |||||||||||||| |||||||| ||| ||| || |
|
|
| T |
6599090 |
gaaataagagtgctgattggctcgctaatttaagcatttctacatatcactttgattttttagtgttggagtctcctcctagtgaggtccaaaaaatact |
6599189 |
T |
|
| Q |
269 |
ctttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattt-tgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||| ||| | |||| |||||||||||||| ||| ||||||| |
|
|
| T |
6599190 |
ttttgatgatttatccggggcttgcatgcctaagaatgttcgtttagctttttagtttgtttttttttttgggctttgccatcttttgtacc |
6599281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 43 - 314
Target Start/End: Complemental strand, 37307448 - 37307177
Alignment:
| Q |
43 |
agattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccggaagctgctgaagatgagttggaatgt |
142 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||| | ||| ||| |||||||||||| ||||| |
|
|
| T |
37307448 |
agattttgatcgacatgatttctgataatttcaagttcaatgagaatattcctgttttagtttaccggatctgaaagttgccgaagatgagttgaaatgt |
37307349 |
T |
|
| Q |
143 |
tcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatcattttaattttcttgtgctggagtct |
242 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||||| ||||||||||| ||| |||||||||||| | ||||| |||||||| || || |||||||| |
|
|
| T |
37307348 |
tcaactcaaccatacttgacgtgaaggaaataggagtgctgattggctcgttaacttaagcatttctacggatcactttaatttactaatgttggagtct |
37307249 |
T |
|
| Q |
243 |
cctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgatta |
314 |
Q |
| |
|
||| || | |||||| |||||||||| || |||||||||||| || ||||||||||||||||| |||||||| |
|
|
| T |
37307248 |
ccttctagcgaggtccaaagaatccttttagatgatttatccaggacttgcatgcctaggaatcttcgatta |
37307177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 10 - 332
Target Start/End: Complemental strand, 40190606 - 40190284
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || ||||||| |||||||| ||||||| ||| |
|
|
| T |
40190606 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgatatgatttctgataattttaagttcaatgaacatattcctattttagtccacca |
40190507 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||| || ||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||| ||||| ||| |||| |||||||||| | |
|
|
| T |
40190506 |
gatcccaaaactgctgaagatgagttggaatgttcaactcaaccatacttgacatgaaggaaataggagtgtagattgactcactaacttaagcatttat |
40190407 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
| ||||| |||||||| || ||| |||| ||||||||| ||||| || ||||||||| ||| |||||||||||| | |||||||| ||| |||||||| |
|
|
| T |
40190406 |
acggatcactttaatttactagtgttggaatctcctcctagtgagatccgaagaatcctttttaatgatttatccgagacttgcatgtctaagaatgttc |
40190307 |
T |
|
| Q |
310 |
gattaacttcttaattttgtttt |
332 |
Q |
| |
|
||||| ||| ||||||||||||| |
|
|
| T |
40190306 |
gattagctttttaattttgtttt |
40190284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 17290048 - 17290389
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||||| | ||||| || ||||||||| | ||| |||||||| | |||||| || |
|
|
| T |
17290048 |
tcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcagg |
17290147 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatc |
216 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||| ||||| |||||||||||||||||| |||| |||||||| |||||||| || |||||| ||| |
|
|
| T |
17290148 |
aagctgctgagaatggattggcatgtgcaaatcaaccatatttggcgtgaaggaaatagaagtgccgattggcttgctaattttagtatttctgtgaatc |
17290247 |
T |
|
| Q |
217 |
attttaattttcttgtgctggagtctcctccttgtgag-gtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaa |
315 |
Q |
| |
|
|||| ||||| || | ||||| |||||||| |||| || |||| || | ||||||||| | |||||||||||||||||||| ||||| || |||| |
|
|
| T |
17290248 |
atttgaatttgattattttggagactcctcctattgagcttcgaaag-ctcatgtttgatgatatttccggggcttgcatgcctagaaatgtccggttaa |
17290346 |
T |
|
| Q |
316 |
cttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||| | | ||| |||||| |||| ||||||||||| ||||||| |
|
|
| T |
17290347 |
tttcgt-agtttcttttctcttggactttgccctctattgtacc |
17290389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 287 - 359
Target Start/End: Complemental strand, 7305027 - 7304956
Alignment:
| Q |
287 |
ggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
|||||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||| |
|
|
| T |
7305027 |
ggcttgcatgcctaagaatgttcgattagcttcttagttttgtttt-ttttgggctttgccctctcttgtacc |
7304956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 359
Target Start/End: Complemental strand, 24126345 - 24126256
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||| | ||| ||||||||||||||||||| | || |||| |||||| |||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
24126345 |
tttgatgatatttccagggcttgcatgcctaggaacttccgtttaatttcttagttttctttttctttgggctttgccctcttttgtacc |
24126256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 42865840 - 42865896
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| ||||||||||| |||| |||| |
|
|
| T |
42865840 |
ctcatcttatagtggagagtgactcaaagattttggtcgacatgattactgaaaatt |
42865896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 11995919 - 11995863
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||| ||||||||||| |||| |||| |
|
|
| T |
11995919 |
ctcatcttatagtggatagtgactcaaagatcttggtcgacatgattactgaaaatt |
11995863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 24126599 - 24126543
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||| ||||||||||| |||| |||| |
|
|
| T |
24126599 |
ctcatcttatagtggagagtgactcaaagatcttggtcgacatgattactgaaaatt |
24126543 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 359
Target Start/End: Complemental strand, 11995647 - 11995574
Alignment:
| Q |
286 |
gggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||||| ||||||| || || |||| |||||| |||| |||| |||||| |||||||||| ||||||| |
|
|
| T |
11995647 |
gggcttgcatgtctaggaacgtccgtttaatttcttagttttctttttctttgggatttgccctcttttgtacc |
11995574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 14 - 91
Target Start/End: Complemental strand, 26381454 - 26381377
Alignment:
| Q |
14 |
ttctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatat |
91 |
Q |
| |
|
||||||||| | |||||| || | |||||||||||||| |||||||||||||| ||||| | ||||| |||||||| |
|
|
| T |
26381454 |
ttctcatctaaaagtggagagcggctcaaagattttgattgacatgatttctgacaattttcatttcaacgggaatat |
26381377 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 11)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 10 - 356
Target Start/End: Original strand, 1636010 - 1636356
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
1636010 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatattcctgttttagtttaccg |
1636109 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
1636110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttagcgtgaaggaaataggagtgctgattggctcgctaatttaatcatttct |
1636209 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| | |||||||||||||| ||| ||||||||||||| ||||||| |
|
|
| T |
1636210 |
acagatcattttaattttcttgtgctggagtctcctccttttgagatcaaaagaatcatttttgatgatttatctgggacttgcatgcctagaaatgttc |
1636309 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgt |
356 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
1636310 |
gattaactttttaattttgttttcttttgggctttgtcctctcttgt |
1636356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 10 - 359
Target Start/End: Complemental strand, 26616911 - 26616564
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
26616911 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatattcctgtt--agtttaccg |
26616814 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |
|
|
| T |
26616813 |
gatctggaagctgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaatatgagtactgattggctcactaatttaagcatttct |
26616714 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||| | |||||||||||||||| |||||||||||||| ||||||| |
|
|
| T |
26616713 |
acagatcattttaattttctagtgttggagtctcctccttgtgatgtcaaaagaatcatttttgatgatttatccgaagcttgcatgcctagaaatgttc |
26616614 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||| |||||||||||| |||| ||||||| |||||||||||||||||| |
|
|
| T |
26616613 |
gattagcttcttaattttatttttttttgggttttgccctctcttgtacc |
26616564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 10 - 359
Target Start/End: Complemental strand, 456547 - 456200
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||| |||||||||||||||||||||||| || |||| |
|
|
| T |
456547 |
attactctcatcttatagtggaaagtgattcaaagagtttgattgatatgatttctgataatttcaagttcaatgggaatattcctgttttatttcaccg |
456448 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| ||||||||| || |||||||||||||||| | |||||||||||||||||| ||||||| |
|
|
| T |
456447 |
gatccggaagctactgaagatgagttggaatgttcaactcaaccatacttgacgcgaaggaaataggagtgctaattggctcgctaatttaaacatttct |
456348 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
| |||| ||| ||||| | |||||||||| ||||||| | ||||| |||||||||| |||||| ||||||||||| |||||||||||| ||||||| |
|
|
| T |
456347 |
acgtatcactttgattttttagtgctggagtttcctcctaataaggtccaaagaatcctttttgattatttatccgggacttgcatgcctatgaatgttt |
456248 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||| ||| ||| ||| |||| |||||||||||||| ||||||||||| |
|
|
| T |
456247 |
gattatctttttagtttggttt--ttttgggctttgccttctcttgtacc |
456200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 44145724 - 44146064
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||||| | ||||| || ||||||||| | ||| |||||||| | |||||| || |
|
|
| T |
44145724 |
tcatcttat-gtggaaagtgactcgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcagg |
44145822 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatc |
216 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||| |||||||||||||||||||||||| |||| |||||| || |||||||| ||||||||| ||| |
|
|
| T |
44145823 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgctgattgacttgctaattttagcatttctgtgaatc |
44145922 |
T |
|
| Q |
217 |
attttaattttcttgtgctggagtctcctccttgtgag-gtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaa |
315 |
Q |
| |
|
|||| ||||| || | ||||| |||||||| |||| || |||| || | |||||||| | | ||||||||||||||||| ||||| || |||| |
|
|
| T |
44145923 |
atttgaatttgattattttggagactcctcctattgagcttcgaaag-ctcatggttgatgatattttcggggcttgcatgcctaaaaatgtccggttaa |
44146021 |
T |
|
| Q |
316 |
cttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||| ||| ||| |||||| |||||||||||||||| ||||||| |
|
|
| T |
44146022 |
tttcgtaa-tttcttttctcttgggctttgccctctattgtacc |
44146064 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 38560798 - 38560608
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||||| |||||||||||| |||||||| ||||||||||| ||| |||||||| | |||||| | |
|
|
| T |
38560798 |
tcatcttatagtggaaagtggctcgaagatattgatcgacgtgatttctgataggttcaaatttaatgggaatatccctattttagttcatcgtatcaag |
38560699 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcattt |
207 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||| ||||||||||| ||||||||||| |||| |||||||| |||||||| ||||||| |
|
|
| T |
38560698 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcacgaaggaaatagaagtgccgattggcttgctaattttagcattt |
38560608 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 270 - 359
Target Start/End: Original strand, 45093618 - 45093707
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||| | ||||||||||||||||||||||| || || |||| |||||| |||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
45093618 |
tttgatgatatttccggggcttgcatgcctaggaacgtccgtttaatttcttagttttctttttctttgggctttgccctcttttgtacc |
45093707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 270 - 343
Target Start/End: Original strand, 42000452 - 42000525
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctt |
343 |
Q |
| |
|
||||||||| | |||||||||||||||| |||||||||||| |||| |||||| |||| |||| ||||||||| |
|
|
| T |
42000452 |
tttgatgatatttccggggcttgcatgcataggaatgttcgtttaatttcttagttttctttttctttgggctt |
42000525 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 357
Target Start/End: Original strand, 33373375 - 33373461
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgta |
357 |
Q |
| |
|
||||||||| | ||||| ||||||||||||||||| || || |||| |||||| |||| |||| ||||||||||||||||| ||||| |
|
|
| T |
33373375 |
tttgatgatatttccggagcttgcatgcctaggaacgtccgtttaatttcttagtttt-ctttcctttgggctttgccctcttttgta |
33373461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 33373121 - 33373177
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||| ||||||||||| |||| |||| |
|
|
| T |
33373121 |
ctcatcttatagtggagagtgactcaaagatcttggtcgacatgattactgaaaatt |
33373177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 45093364 - 45093420
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| ||| ||||||||||| |||| |||| |
|
|
| T |
45093364 |
ctcatcttatagtggatagtgactcaaagatcttggtcgacatgattactgaaaatt |
45093420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 9469177 - 9469221
Alignment:
| Q |
288 |
gcttgcatgcctaggaatgttcgattaacttcttaattttgtttt |
332 |
Q |
| |
|
|||||||||||||| |||||||| |||| |||||||||| ||||| |
|
|
| T |
9469177 |
gcttgcatgcctagaaatgttcgtttaatttcttaatttggtttt |
9469221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 277; Significance: 1e-155; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 10 - 358
Target Start/End: Complemental strand, 34389992 - 34389644
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
34389992 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaagttcaatgggaatattcttgttttagtttaccg |
34389893 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
34389892 |
gatccgaaagctgctgaagatgatttggaatgttcaactcaaccatacttagcgtgaaggaaataggagtgctgattggctcgctaatttaagcattttt |
34389793 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
|| |||||||||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
34389792 |
acatatcattttaattttttagtgttggagtctcctccttgtgaggtcaaaagaatcctttttgatgatttatccggggcttacatgcctaggaatgttc |
34389693 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtac |
358 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34389692 |
gattagcttcttaattttgttttcttttgggctttgccctctcttgtac |
34389644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 10 - 354
Target Start/End: Complemental strand, 36894603 - 36894255
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
36894603 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctaataatttcaagttcaatgtgaatattcctgttttagtttaccg |
36894504 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | |
|
|
| T |
36894503 |
gatccggaagttgctgaagatgagttggaatgttcaactcaaccatacttggcgtgaaggaaataggagtgttgattggctcgctaatttaagcatttat |
36894404 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
36894403 |
acagatcattttaattttctagtgttggagtctcctccttgtgaggtcaaaagaatcctttttgatgatttatccggagcttgcatgcctaggaatgttc |
36894304 |
T |
|
| Q |
310 |
gattaacttcttaa-ttttgttttctttt---gggctttgccctctctt |
354 |
Q |
| |
|
||||| |||||||| ||||||||| |||| || |||||||||||||| |
|
|
| T |
36894303 |
gattagcttcttaatttttgtttttttttttgggtctttgccctctctt |
36894255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 207
Target Start/End: Complemental strand, 47597770 - 47597580
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||| || ||||||||||| ||| |||||||| | ||||| || |
|
|
| T |
47597770 |
tcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacaagttcaagtttaatgggaatatgcctattttagttcattgtatcagg |
47597671 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcattt |
207 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||| ||||||||||| | |||||||||| |||| |||||||| |||||||| ||||||| |
|
|
| T |
47597670 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcataaaggaaatagaagtgccgattggcttgctaattttagcattt |
47597580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 359
Target Start/End: Original strand, 4228307 - 4228531
Alignment:
| Q |
134 |
ttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatcattttaattttcttgtg |
233 |
Q |
| |
|
|||| |||| ||| ||| |||||||||||||||||||||||| |||| |||||||| |||||||| ||||||||| || |||| ||||| || | |
|
|
| T |
4228307 |
ttggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaattatttgaatttgattatt |
4228406 |
T |
|
| Q |
234 |
ctggagtctcctccttgtgag-gtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgtttt |
332 |
Q |
| |
|
||||| |||||||| |||| || |||| || | ||||||||| | ||||||||||||||||||| |||| | || |||| ||| | | ||| |||| |
|
|
| T |
4228407 |
ttggagactcctcctattgagcttcgaaag-ctcatgtttgatgatatttccggggcttgcatgcctaagaatatccggttaatttcgt-agtttctttt |
4228504 |
T |
|
| Q |
333 |
cttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
|||||| |||||||||||| ||||||| |
|
|
| T |
4228505 |
cttttgagctttgccctctattgtacc |
4228531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 284 - 359
Target Start/End: Original strand, 44307715 - 44307790
Alignment:
| Q |
284 |
cggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||||||||||||||| ||||| |||| |||||| |||| |||| |||| |||||||||||| ||||||| |
|
|
| T |
44307715 |
cggggcttgcatgcctaggaacgttcgtttaatttcttagttttctttttctttgtgctttgccctcttttgtacc |
44307790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 1369357 - 1369413
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| ||||||||||| |||| |||| |
|
|
| T |
1369357 |
ctcatcttatagtggagagtgactcaaagattttggtcgacatgattactgaaaatt |
1369413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 28945552 - 28945496
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| ||||||||||| |||| |||| |
|
|
| T |
28945552 |
ctcatcttatagtggagagtgactcaaagattttggtcgacatgattactgaaaatt |
28945496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 17 - 113
Target Start/End: Complemental strand, 43270970 - 43270874
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatc |
113 |
Q |
| |
|
|||||||||||| ||||||| || ||||| |||||||||||||||| ||| |||||||| | ||||| ||||| ||| |||||||| | |||||| |
|
|
| T |
43270970 |
tcatcttatagttaaaagtgactctaagatattgatcgacatgatttttgacaatttcaagcttaatggaaatatccctattttagttcatcgtatc |
43270874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 336
Target Start/End: Original strand, 1217216 - 1217402
Alignment:
| Q |
150 |
acccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatcattttaattttcttgtgctggagtctcctcctt |
249 |
Q |
| |
|
|||||||||||||| ||||| || || |||| |||||||| |||||||| |||||||| | ||| ||| |||||| | | |||||| |||||||| |
|
|
| T |
1217216 |
acccatacttggcgggaaggcaacagaagtgcagattggcttgctaatttcagcatttcgacggattttttagattttcatattctggagactcctccta |
1217315 |
T |
|
| Q |
250 |
gtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttt |
336 |
Q |
| |
|
||||| | | || | | ||||||||| | ||||||||||||||||||||||| || || |||| |||||| |||| ||| |||| |
|
|
| T |
1217316 |
gtgagcttcagagtcttttgtttgatgatatttccggggcttgcatgcctaggaacgtccgtttaatttcttagttttctttccttt |
1217402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 359
Target Start/End: Original strand, 28099577 - 28099611
Alignment:
| Q |
325 |
tttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
28099577 |
tttgttttcttttgggctttgccctctcttgtacc |
28099611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 861273 - 861335
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgtttt |
332 |
Q |
| |
|
||||||||| | ||||||||||||||| |||| | |||||| |||||||||| ||||||||| |
|
|
| T |
861273 |
tttgatgatatttccggggcttgcatgtctagaagtgttcggctaacttcttagttttgtttt |
861335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 44307581 - 44307639
Alignment:
| Q |
150 |
acccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttc |
208 |
Q |
| |
|
|||||||||||||||||||| || || |||| |||||||| |||||||| |||||||| |
|
|
| T |
44307581 |
acccatacttggcgtgaaggcaacagaagtgcagattggcttgctaatttcagcatttc |
44307639 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 24246331 - 24246286
Alignment:
| Q |
265 |
tcctctttgatgatttatccggggcttgcatgcctaggaatgttcg |
310 |
Q |
| |
|
|||||||||||||| | | ||||||||||||| ||||||||||||| |
|
|
| T |
24246331 |
tcctctttgatgatattttcggggcttgcatgtctaggaatgttcg |
24246286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 270; Significance: 1e-151; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 10 - 359
Target Start/End: Complemental strand, 18259326 - 18258977
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| |
|
|
| T |
18259326 |
attactctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataattccaaattcaatgggaatattcttgttttagtttaccg |
18259227 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||| |||||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
18259226 |
gatccggaagctgctgaagataagttgaaatgttcaactcaaccatacctggcgcgaaggaaatatgagtgctgattggctcgctaatttaagcatttcg |
18259127 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18259126 |
acagatcattttaattttctagtgttggagtctcctccttgtgaggtcaaaagaatcatttttgatgatttatccggggcttgcatgcctaggaatgttc |
18259027 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||| ||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
18259026 |
gattagcttctaaattttattttcttttgggctttgccctctcttgtacc |
18258977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 10 - 359
Target Start/End: Original strand, 22540222 - 22540571
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| ||||||||||||||||||||| | |
|
|
| T |
22540222 |
attactctcatcttatagttgaaagtgattcaaagattttgatcgacgtgatttctgataatttcaagttcgatggaaatattcctgttttagtttactg |
22540321 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
22540322 |
gatccggaagctgctgaagatgagttggaatgttcaactcaaccatacttggcgtaaaggaaataggagtgttgattgactcgctaatttaagcatttct |
22540421 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
|||||||||| |||||||| ||| || ||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||| ||| ||||||| |
|
|
| T |
22540422 |
acagatcatttaaattttctagtgttgaagtctcctccttgtgaggtcaaaagaatcatttttgatgatttatccggagcttgcatgcatagaaatgttc |
22540521 |
T |
|
| Q |
310 |
gattaacttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||||| ||||||||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
22540522 |
gattagcttcttaattttgtttttgtttgggctttgccctctcttatacc |
22540571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 10 - 332
Target Start/End: Complemental strand, 34080925 - 34080606
Alignment:
| Q |
10 |
attattctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccg |
109 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||| || |||||||||||||| ||||| ||||||| |||||||| |||||||||| |||| |
|
|
| T |
34080925 |
attactctcatcttatagtggaaagtgatttaaagattttgatggatatgatttctgataaattcaagttcaatgcgaatattcttgttttagttcaccg |
34080826 |
T |
|
| Q |
110 |
tatccggaagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttct |
209 |
Q |
| |
|
|||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| | ||||| ||||||||| |||||||||| ||||| | |
|
|
| T |
34080825 |
gatccagaagctgctgaagatgggttggaatgttcaactcaaccatacttggcgtgaaggaaacatgagtgttgattggcttgctaatttaaacattttt |
34080726 |
T |
|
| Q |
210 |
tcagatcattttaattttcttgtgctggagtctcctccttgtgaggtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttc |
309 |
Q |
| |
|
|| |||| ||||||||| | ||| ||||||| |||| |||||||| ||| |||||| ||||||||||||| || |||||||||||||| ||||||| |
|
|
| T |
34080725 |
acatatcactttaattttatagtgttggagtc---tcctagtgaggtccaaaaaatcctttttgatgatttatttggagcttgcatgcctagaaatgttc |
34080629 |
T |
|
| Q |
310 |
gattaacttcttaattttgtttt |
332 |
Q |
| |
|
||||| || ||||||||||||| |
|
|
| T |
34080628 |
gattagttttttaattttgtttt |
34080606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 17 - 359
Target Start/End: Complemental strand, 4560496 - 4560155
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||||| || ||||| || ||||||||||| ||| |||||||| | |||||| || |
|
|
| T |
4560496 |
tcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgaaaagttcaagtttaatgggaatatgcctattttagttcatcgtatcagg |
4560397 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatc |
216 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||| |||||||||||||||||||||||| |||| |||||| || |||||||| ||||||||| ||| |
|
|
| T |
4560396 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgctgattgacttgctaattttagcatttctgtgaatc |
4560297 |
T |
|
| Q |
217 |
attttaattttcttgtgctggagtctcctccttgtgag-gtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaa |
315 |
Q |
| |
|
|||| ||||| || | ||||| |||||||| |||| || |||| || | ||||||||| | || ||||||| ||||||||| |||||||| |||| |
|
|
| T |
4560296 |
atttgaatttgattattttggagactcctcctactgagcttcgaaag-ctcatgtttgatgatatttctggggcttacatgcctagaaatgttcggttaa |
4560198 |
T |
|
| Q |
316 |
cttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||| | | ||| |||||| ||||| |||||||||| ||||||| |
|
|
| T |
4560197 |
tttcgt-agtttcttttctcttgggatttgccctcttttgtacc |
4560155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 359
Target Start/End: Original strand, 18934072 - 18934413
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| | ||||| |||||||||||||||||||| | ||||| || ||||||||| | ||| |||||||| | |||||| || |
|
|
| T |
18934072 |
tcatcttattgtggaaagtgacccgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcagg |
18934171 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatc |
216 |
Q |
| |
|
|||||||||| ||| |||| |||| ||| ||| |||||||||||||||||||||||| |||| |||||||| |||||||| ||||||||| ||| |
|
|
| T |
18934172 |
aagctgctgagaatggattggcatgtgcaaatcaaccatacttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaatc |
18934271 |
T |
|
| Q |
217 |
attttaattttcttgtgctggagtctcctccttgtgag-gtcaaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaa |
315 |
Q |
| |
|
|||| ||||| || | ||||| |||||||| |||| || |||| || | ||||||||| | |||||||||||||||||||||||||| || |||| |
|
|
| T |
18934272 |
atttgaatttgattattttggagactcctcctattgagcttcgaaag-ctcatgtttgatgatatttccggggcttgcatgcctaggaatgtccggttaa |
18934370 |
T |
|
| Q |
316 |
cttcttaattttgttttcttttgggctttgccctctcttgtacc |
359 |
Q |
| |
|
||| | | ||| |||||| |||| ||||||||||| ||||||| |
|
|
| T |
18934371 |
tttcgt-agtttcttttctcttggactttgccctctattgtacc |
18934413 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 18883400 - 18883590
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||||||||||| ||| |||||||| ||||||||||||||||| || || || || || ||||||||||| ||| |||||||| | ||||| || |
|
|
| T |
18883400 |
tcatcttatagtggaaaatgactcaaagatattgatcgacatgatttcggacaagtttaagtttaatgggaatatccctattttagttcattgtatcagg |
18883499 |
T |
|
| Q |
117 |
aagctgctgaagatgagttggaatgttcaactcacccatacttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcattt |
207 |
Q |
| |
|
||||| |||| ||| ||| |||| ||| ||| |||||||||||| ||||||||||| || |||||||| |||||||| ||||||| |
|
|
| T |
18883500 |
aagctactgagaatggattgacatgtgcaaatcaaccatacttggcgcgaaggaaatagatatgccgattggcttgctaattttagcattt |
18883590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 259 - 334
Target Start/End: Original strand, 13236721 - 13236796
Alignment:
| Q |
259 |
aaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttct |
334 |
Q |
| |
|
|||||||| | ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
13236721 |
aaagaatcatttttgatgttttatccgaggcttgcatgcttaggaatgttcgattaacttcttaattttattttct |
13236796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 133
Target Start/End: Original strand, 32216808 - 32216927
Alignment:
| Q |
14 |
ttctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatc |
113 |
Q |
| |
|
||||||||| |||||||| || | ||||||||||||||| |||||||| ||| |||||| | ||||||| |||||| ||| ||||||| || |||||| |
|
|
| T |
32216808 |
ttctcatctaatagtggagagcaactcaaagattttgatcaacatgattcctggcaatttccatttcaatgagaatatccctattttagtctagcgtatc |
32216907 |
T |
|
| Q |
114 |
cggaagctgctgaagatgag |
133 |
Q |
| |
|
|||||| ||||||||||| |
|
|
| T |
32216908 |
tagaagcttctgaagatgag |
32216927 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 14024858 - 14024914
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
|||||||||||||||| ||||| |||||||||||| ||||||||||| |||| |||| |
|
|
| T |
14024858 |
ctcatcttatagtggagagtgactcaaagattttggtcgacatgattactgaaaatt |
14024914 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 332
Target Start/End: Original strand, 7531130 - 7531192
Alignment:
| Q |
270 |
tttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgtttt |
332 |
Q |
| |
|
|||||||| || |||||||||||||||||||||| |||||| || ||| ||| ||||||||| |
|
|
| T |
7531130 |
tttgatgacttttccggggcttgcatgcctaggagtgttcggatagctttttagttttgtttt |
7531192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 32386411 - 32386467
Alignment:
| Q |
16 |
ctcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatt |
72 |
Q |
| |
|
||||||||||| |||| ||||| |||||||| ||| ||||||||||| |||| |||| |
|
|
| T |
32386411 |
ctcatcttatactggagagtgactcaaagatcttggtcgacatgattactgaaaatt |
32386467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 1223142 - 1223033
Alignment:
| Q |
17 |
tcatcttatagtggaaagtgattcaaagattttgatcgacatgatttctgataatttcaaattcaatgggaatattcctgttttagtttaccgtatccgg |
116 |
Q |
| |
|
||||||||| ||||||||||| || ||||| |||||||||||||||||||| | ||||| || ||||||||| | ||| |||||||| | |||||| || |
|
|
| T |
1223142 |
tcatcttattgtggaaagtgactcgaagatattgatcgacatgatttctgacgagttcaagtttaatgggaatgtgcctattttagttcatcgtatcagg |
1223043 |
T |
|
| Q |
117 |
aagctgctga |
126 |
Q |
| |
|
|||||||||| |
|
|
| T |
1223042 |
aagctgctga |
1223033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 359
Target Start/End: Complemental strand, 1223019 - 1222819
Alignment:
| Q |
158 |
ttggcgtgaaggaaataggagtgatgattggctcgctaatttaagcatttcttcagatcattttaattttcttgtgctggagtctcctccttgtgaggt- |
256 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| |||||||| ||||||||| ||||||| ||||| || | ||||| |||||||| |||| | |
|
|
| T |
1223019 |
ttggcgtgaaggaaatagaagtgccgattggcttgctaattttagcatttctgtgaatcatttgaatttgattattttggagactcctcctattgagctt |
1222920 |
T |
|
| Q |
257 |
caaaagaatcctctttgatgatttatccggggcttgcatgcctaggaatgttcgattaacttcttaattttgttttcttttgggctttgccctctcttgt |
356 |
Q |
| |
|
| |||| || | ||||||||| | |||||||||||||||||||||||||| || |||| ||| | | ||| |||||| |||||||||||||||| |||| |
|
|
| T |
1222919 |
cgaaagc-tcatgtttgatgatatttccggggcttgcatgcctaggaatgtccggttaatttcgt-agtttcttttctcttgggctttgccctctattgt |
1222822 |
T |
|
| Q |
357 |
acc |
359 |
Q |
| |
|
||| |
|
|
| T |
1222821 |
acc |
1222819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 265 - 310
Target Start/End: Complemental strand, 20679071 - 20679026
Alignment:
| Q |
265 |
tcctctttgatgatttatccggggcttgcatgcctaggaatgttcg |
310 |
Q |
| |
|
|||| ||||||||| | ||||||||||||||||||||||||||||| |
|
|
| T |
20679071 |
tcctatttgatgatatttccggggcttgcatgcctaggaatgttcg |
20679026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University