View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17838_low_37 (Length: 211)
Name: NF17838_low_37
Description: NF17838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17838_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 50 - 147
Target Start/End: Complemental strand, 12870252 - 12870157
Alignment:
| Q |
50 |
ggaatatgtgccatgctttgtattgatacatataacagcataaaaatcaatggaggaggagaagagagaggtgcacacaaaccccaccaactcatcat |
147 |
Q |
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| T |
12870252 |
ggaatatgtgccatgctttgtattgatacata--acagcataaaaatcaatggaggaggagaagagagaggagcacacaaaccccaccaactcatcat |
12870157 |
T |
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