View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1783_high_107 (Length: 225)
Name: NF1783_high_107
Description: NF1783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1783_high_107 |
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Alignment Details
Target: chr5 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 12 - 212
Target Start/End: Original strand, 6594136 - 6594336
Alignment:
| Q |
12 |
gagaagaattgatgagctggacttggagtgtagaacgggaataacggagatcgcttaacggtttctgtttcgttagagttttcgccattgacagtgacgg |
111 |
Q |
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| T |
6594136 |
gagaagaattgatgagctggacttggagtgtagaacgggaataacggagatcgcttaacggtttctgtttcgttagagttttcgccattgacagtgacgg |
6594235 |
T |
|
| Q |
112 |
agtttgtgtgaggttcagaacttccgttaagtgtgacggagttttgttgaggaagttcagtgttgaaattgcgagaggaatgagtgagagtttttgaagt |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
6594236 |
agtttgtgtgaggttcagaacttccgttaagtgtgacggagttttgttgaggaagttcagtgttgaaattgcgagaggaatgagtgagattttttgaagt |
6594335 |
T |
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| Q |
212 |
g |
212 |
Q |
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| T |
6594336 |
g |
6594336 |
T |
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