View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1783_high_63 (Length: 270)
Name: NF1783_high_63
Description: NF1783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1783_high_63 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 24972724 - 24972472
Alignment:
| Q |
1 |
agcaaattaaaattgtgtttgaattagcatttgacaaatgtgatgattttgaatgaatttgattttataaaactgatttaattaaatatgaattttacat |
100 |
Q |
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| T |
24972724 |
agcaaattaaaattgtgtttgaattagcatttgacaaatgtgatgattttgaatgaatttgattttataaaactgatttaattaaatatgaattttacat |
24972625 |
T |
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| Q |
101 |
-aagttatctatgtttggatattttacactataacatgtttgataaatctaacgaagagtta-ctttatttacttcttggcaaactaaggtttgaagata |
198 |
Q |
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|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
24972624 |
aaagttatctatg-ttggatattttacactaaaacatgtttgataaatctaacgaagagttagatttatttacttcttggcaaactaaggtttgaagata |
24972526 |
T |
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| Q |
199 |
aaattaattttaattcaaagtagccaaatatccacaattttcttttcctgaaat |
252 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24972525 |
aaattaattttaattcaaagtagccaaatatccacaattttcttttcctgaaat |
24972472 |
T |
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