View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1783_high_71 (Length: 252)
Name: NF1783_high_71
Description: NF1783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1783_high_71 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 363834 - 364068
Alignment:
| Q |
13 |
aatattgacaatagtcataaaatgttgattcctatgacgactaacaatttcaccttatagagatcaaaaagtgttagcgcagctatgaaattgttgcaca |
112 |
Q |
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| T |
363834 |
aatattgacaatagtcataaaatgttgattcctatgacgactaacaatttcaccttatagagatcaaaaagtgttagcgcagctatgaaattgttgcaca |
363933 |
T |
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| Q |
113 |
agcaacaataacagaaaacagttttaggagttttcagcgtgttgtgtgatttagagaattagagagaatgagaaaaat---aagaataaaagaagaggtt |
209 |
Q |
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| T |
363934 |
agcaacaataacagaaaacagttttaggggttttcagtgtgttgtgtgat--------ttagagagaatgagaaaaataagaagaataaaagaagaggtt |
364025 |
T |
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| Q |
210 |
tgtgaaattatgatttcatgtatattgtatttgagtcacacta |
252 |
Q |
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| T |
364026 |
tgtgaaattatgatttcatgtatattgtatttgagtcacacta |
364068 |
T |
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