View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1783_high_84 (Length: 243)
Name: NF1783_high_84
Description: NF1783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1783_high_84 |
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Alignment Details
Target: chr2 (Bit Score: 187; Significance: 1e-101; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 43792847 - 43792608
Alignment:
| Q |
1 |
tttccatggatctataagatttaacaaaagtcttcaaacatgagaataacttaaaaggtttttgggatgaagtgggtaatagggtccaatcaagtttacc |
100 |
Q |
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| T |
43792847 |
tttccatggatctatgagatttaacaaaagtcttcaaacatgagaataacttaaaaggtttttgggatgaagtgggtaatagggtccgatcaattttacc |
43792748 |
T |
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| Q |
101 |
aatatagaa-----atcgtgagaacaatggacactatgttgcgacataaattattttttcccaaataaatgattttgcgacataaaatatttttgaccca |
195 |
Q |
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| T |
43792747 |
aatatagaatagaaatcgtgagaacaatggac--tatgttgcgacataaattattttgtcccaaataaatgattttgcgacataaaatatttttgaccca |
43792650 |
T |
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| Q |
196 |
aaattccatcctaattttaagtttttcttatagtgggtatat |
237 |
Q |
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| T |
43792649 |
aaattccatcctaattttaagtttttcttcaagtgggtatat |
43792608 |
T |
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