View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1783_high_85 (Length: 242)
Name: NF1783_high_85
Description: NF1783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1783_high_85 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 42822023 - 42821797
Alignment:
| Q |
1 |
atccattttcatcaaacttttgaatgctaaaaagcatgacatattggtggtgctataacctccatccaaaacaaagttgactccattaacaagcttggac |
100 |
Q |
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| T |
42822023 |
atccattttcatcaaacttttgaatgctaaaaagcatgacatattggtggtgctataacctccatccaaaacaaagttgactccattaacaagcttggac |
42821924 |
T |
|
| Q |
101 |
tcatcactactcaaataaagtgctgcctcagctatatcctcaactttaggaacaacctcttttaacacaccagctgaggacaaaacttgctccacttcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42821923 |
tcatcactactcaaataaagtgctgcctcagctatatcctcaattttaggaacaacctcttttaacacaccagctgaggacaaaacttgctccacttcat |
42821824 |
T |
|
| Q |
201 |
tcttgttcaacttcaatgagttcatta |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
42821823 |
tcttgttcaacttcaatgagttcatta |
42821797 |
T |
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