View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1783_low_2 (Length: 890)

Name: NF1783_low_2
Description: NF1783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1783_low_2
NF1783_low_2
[»] chr2 (26 HSPs)
chr2 (86-592)||(30001201-30001697)
chr2 (484-761)||(45258012-45258285)
chr2 (594-813)||(12168879-12169094)
chr2 (1-90)||(30001010-30001098)
chr2 (504-734)||(3586346-3586574)
chr2 (600-756)||(10923141-10923293)
chr2 (604-812)||(45714902-45715106)
chr2 (520-750)||(36267467-36267693)
chr2 (529-790)||(27846424-27846681)
chr2 (594-734)||(15825137-15825275)
chr2 (600-790)||(12127639-12127825)
chr2 (520-812)||(19918962-19919250)
chr2 (621-734)||(20120330-20120441)
chr2 (601-710)||(24499796-24499903)
chr2 (594-750)||(29710987-29711137)
chr2 (578-663)||(23257834-23257918)
chr2 (683-734)||(12634829-12634880)
chr2 (593-690)||(18135898-18135993)
chr2 (600-663)||(18772300-18772363)
chr2 (612-686)||(18134349-18134423)
chr2 (663-756)||(30638526-30638617)
chr2 (594-663)||(15390555-15390624)
chr2 (664-731)||(36022447-36022514)
chr2 (637-690)||(18770341-18770392)
chr2 (608-733)||(24755452-24755575)
chr2 (660-734)||(29137884-29137958)
[»] chr6 (39 HSPs)
chr6 (522-813)||(3404760-3405047)
chr6 (520-714)||(19305467-19305659)
chr6 (531-796)||(34187222-34187478)
chr6 (520-750)||(18147275-18147501)
chr6 (520-748)||(11087473-11087697)
chr6 (600-734)||(20148300-20148430)
chr6 (600-734)||(22184398-22184528)
chr6 (594-783)||(30680928-30681113)
chr6 (594-731)||(34064181-34064316)
chr6 (590-690)||(15480307-15480405)
chr6 (520-734)||(22572028-22572239)
chr6 (593-727)||(689827-689958)
chr6 (588-726)||(34572958-34573094)
chr6 (520-708)||(14268440-14268626)
chr6 (601-755)||(9277278-9277427)
chr6 (603-734)||(31295514-31295643)
chr6 (588-734)||(9291984-9292127)
chr6 (594-734)||(12424284-12424422)
chr6 (594-734)||(27860918-27861056)
chr6 (594-734)||(33596844-33596982)
chr6 (600-750)||(22497274-22497420)
chr6 (609-715)||(4251029-4251133)
chr6 (600-718)||(19730567-19730683)
chr6 (660-734)||(25008424-25008498)
chr6 (600-716)||(9403173-9403287)
chr6 (594-753)||(12449553-12449708)
chr6 (594-690)||(16130995-16131089)
chr6 (595-690)||(17380124-17380217)
chr6 (594-685)||(19277046-19277135)
chr6 (600-690)||(10115661-10115749)
chr6 (601-660)||(12203615-12203674)
chr6 (670-756)||(16343542-16343626)
chr6 (614-731)||(18566643-18566758)
chr6 (665-752)||(19331719-19331804)
chr6 (594-683)||(31423807-31423894)
chr6 (616-729)||(10926886-10926997)
chr6 (404-472)||(10115529-10115597)
chr6 (600-643)||(27772541-27772584)
chr6 (600-645)||(22692162-22692207)
[»] chr1 (24 HSPs)
chr1 (408-790)||(16030324-16030702)
chr1 (594-734)||(26977723-26977861)
chr1 (600-734)||(12177369-12177501)
chr1 (600-789)||(5671700-5671885)
chr1 (600-764)||(16050349-16050509)
chr1 (602-790)||(33101485-33101669)
chr1 (600-787)||(18246075-18246257)
chr1 (529-731)||(2140853-2141049)
chr1 (600-734)||(34273070-34273202)
chr1 (593-750)||(23728789-23728941)
chr1 (595-733)||(52565564-52565700)
chr1 (614-750)||(22414744-22414876)
chr1 (600-733)||(23280238-23280367)
chr1 (604-734)||(25408079-25408207)
chr1 (534-790)||(5459619-5459870)
chr1 (600-746)||(4601463-4601605)
chr1 (600-734)||(1659765-1659897)
chr1 (663-733)||(16522759-16522829)
chr1 (595-735)||(21682561-21682699)
chr1 (670-733)||(3590811-3590874)
chr1 (578-645)||(8019018-8019085)
chr1 (660-750)||(14255064-14255152)
chr1 (378-431)||(1659544-1659597)
chr1 (594-663)||(12032223-12032291)
[»] chr4 (16 HSPs)
chr4 (484-726)||(47253268-47253508)
chr4 (602-750)||(12683754-12683898)
chr4 (528-734)||(29157085-29157289)
chr4 (529-816)||(10981769-10982050)
chr4 (594-750)||(19809671-19809822)
chr4 (595-693)||(19643726-19643822)
chr4 (520-728)||(2674470-2674672)
chr4 (600-734)||(15514537-15514669)
chr4 (594-733)||(5518524-5518661)
chr4 (594-750)||(15742123-15742275)
chr4 (600-731)||(14601991-14602120)
chr4 (663-812)||(3981857-3982002)
chr4 (662-731)||(13171065-13171134)
chr4 (660-717)||(16012505-16012562)
chr4 (595-643)||(50151775-50151823)
chr4 (608-663)||(19818745-19818800)
[»] chr5 (17 HSPs)
chr5 (406-747)||(27083021-27083356)
chr5 (600-812)||(22903000-22903208)
chr5 (600-813)||(8938816-8939026)
chr5 (423-749)||(20025253-20025576)
chr5 (529-726)||(26994511-26994706)
chr5 (595-734)||(22865744-22865881)
chr5 (594-747)||(25537377-25537526)
chr5 (661-750)||(16621177-16621264)
chr5 (594-733)||(24647272-24647409)
chr5 (520-733)||(32418382-32418593)
chr5 (603-661)||(34493567-34493625)
chr5 (485-632)||(26163700-26163848)
chr5 (674-734)||(26348127-26348187)
chr5 (600-690)||(25333762-25333850)
chr5 (661-733)||(19846053-19846125)
chr5 (661-733)||(26163619-26163691)
chr5 (590-632)||(26348057-26348099)
[»] chr8 (20 HSPs)
chr8 (595-812)||(30477548-30477761)
chr8 (537-790)||(13754687-13754936)
chr8 (529-759)||(13764949-13765175)
chr8 (600-753)||(18322909-18323058)
chr8 (520-710)||(6927990-6928174)
chr8 (594-728)||(17698255-17698387)
chr8 (601-734)||(17927681-17927812)
chr8 (520-655)||(23497060-23497194)
chr8 (660-756)||(23269209-23269303)
chr8 (594-733)||(26916868-26917005)
chr8 (594-760)||(3459454-3459615)
chr8 (617-734)||(24507440-24507555)
chr8 (659-734)||(1909741-1909816)
chr8 (520-717)||(5859815-5860010)
chr8 (600-734)||(15058018-15058150)
chr8 (604-725)||(21416730-21416849)
chr8 (623-704)||(24070865-24070945)
chr8 (600-734)||(24576559-24576691)
chr8 (539-643)||(23269306-23269411)
chr8 (592-657)||(17319600-17319665)
[»] chr3 (22 HSPs)
chr3 (600-734)||(9801060-9801191)
chr3 (600-734)||(21342263-21342395)
chr3 (602-813)||(2311812-2312019)
chr3 (534-690)||(30606955-30607109)
chr3 (600-714)||(17143725-17143837)
chr3 (594-754)||(431286-431442)
chr3 (601-805)||(28715465-28715660)
chr3 (594-690)||(16704429-16704523)
chr3 (602-727)||(8122893-8123015)
chr3 (600-730)||(20622393-20622523)
chr3 (404-512)||(13084839-13084947)
chr3 (600-730)||(12516172-12516300)
chr3 (594-758)||(14860069-14860229)
chr3 (608-748)||(17485608-17485744)
chr3 (520-790)||(28723669-28723936)
chr3 (660-756)||(21649376-21649470)
chr3 (637-734)||(1770808-1770903)
chr3 (600-688)||(12731537-12731623)
chr3 (740-784)||(29644481-29644525)
chr3 (672-727)||(6109699-6109754)
chr3 (661-734)||(12108402-12108475)
chr3 (551-690)||(25495965-25496103)
[»] scaffold0023 (2 HSPs)
scaffold0023 (600-717)||(95786-95901)
scaffold0023 (520-571)||(95706-95756)
[»] scaffold0002 (2 HSPs)
scaffold0002 (590-750)||(379685-379841)
scaffold0002 (594-693)||(120981-121078)
[»] chr7 (22 HSPs)
chr7 (504-734)||(26762791-26763019)
chr7 (600-734)||(9135337-9135469)
chr7 (514-717)||(5863187-5863388)
chr7 (604-750)||(12644754-12644897)
chr7 (600-734)||(39879370-39879503)
chr7 (601-734)||(7486528-7486659)
chr7 (630-750)||(21161211-21161326)
chr7 (515-663)||(16203774-16203922)
chr7 (594-756)||(29373409-29373567)
chr7 (594-750)||(13292093-13292245)
chr7 (594-749)||(16987062-16987213)
chr7 (520-668)||(16204338-16204486)
chr7 (623-747)||(9867938-9868058)
chr7 (670-734)||(5925519-5925583)
chr7 (604-715)||(5928991-5929100)
chr7 (389-483)||(13159591-13159685)
chr7 (594-734)||(10287566-10287704)
chr7 (670-734)||(18773964-18774028)
chr7 (594-653)||(43172006-43172065)
chr7 (600-734)||(34854226-34854358)
chr7 (575-628)||(21161342-21161395)
chr7 (588-631)||(13159444-13159487)
[»] scaffold0140 (1 HSPs)
scaffold0140 (569-734)||(6281-6445)
[»] scaffold0360 (1 HSPs)
scaffold0360 (600-734)||(13905-14037)
[»] scaffold0054 (1 HSPs)
scaffold0054 (600-718)||(68778-68892)
[»] scaffold0505 (1 HSPs)
scaffold0505 (600-790)||(7814-8000)
[»] scaffold0205 (2 HSPs)
scaffold0205 (600-734)||(10891-11023)
scaffold0205 (602-734)||(22869-22999)
[»] scaffold0291 (2 HSPs)
scaffold0291 (600-689)||(15406-15493)
scaffold0291 (618-726)||(8571-8676)
[»] scaffold0103 (1 HSPs)
scaffold0103 (595-731)||(40782-40916)
[»] scaffold0005 (1 HSPs)
scaffold0005 (600-731)||(215258-215387)
[»] scaffold0013 (1 HSPs)
scaffold0013 (600-734)||(4400-4532)
[»] scaffold0294 (1 HSPs)
scaffold0294 (602-690)||(220-307)
[»] scaffold0092 (1 HSPs)
scaffold0092 (603-734)||(21597-21726)
[»] scaffold0074 (1 HSPs)
scaffold0074 (616-730)||(35240-35353)
[»] scaffold0174 (1 HSPs)
scaffold0174 (635-751)||(29289-29399)
[»] scaffold0101 (1 HSPs)
scaffold0101 (664-752)||(10756-10842)
[»] scaffold0380 (1 HSPs)
scaffold0380 (593-690)||(6829-6924)
[»] scaffold0263 (1 HSPs)
scaffold0263 (594-690)||(20467-20561)
[»] scaffold0057 (1 HSPs)
scaffold0057 (614-659)||(73792-73837)


Alignment Details
Target: chr2 (Bit Score: 350; Significance: 0; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 86 - 592
Target Start/End: Original strand, 30001201 - 30001697
Alignment:
Q  86 gtttgatcctgacttttgggtacgagatatttttggctaaaatgaaatggaataatttatctaatgtgttcaacaannnnnnnatgaaaattaatcacta 185  Q
    ||||||||||||||| |||||| |||||||||||||||     |||||||||||||||||||||||||||||||||       |||||||||||||||||    
T  30001201 gtttgatcctgacttctgggtatgagatatttttggct-----gaaatggaataatttatctaatgtgttcaacaatttttttatgaaaattaatcacta 30001295  T
Q  186 ttaaataacggtgacaacttcgtagcagtaatatgataacatnnnnnnnnnnnnngtgatattggaaagtagtctttccgtgctacaagtttaagagttc 285  Q
    ||||||||||||||||||||||||||||||| ||||||||||             ||||||||||||| |||||||||||||||||||||||||||||||    
T  30001296 ttaaataacggtgacaacttcgtagcagtaacatgataacataaaaaaaa-----gtgatattggaaaatagtctttccgtgctacaagtttaagagttc 30001390  T
Q  286 aaagagaaaagaaaacatcttcgaagacaaatgagaaattcaaaaataagcattctcgatggcactcgaaaatccaagttatcccaaattttaaaataat 385  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  30001391 aaagagaaaagaaaacatcttcgaagacaagtgagaaattcaaaaataagcattctcgatggcactcgaaaatccaagttatcccaaattttaaaataac 30001490  T
Q  386 tattgttctgaaccggcaagaagaccaatcccatattgacacgtggactatacatacactgccttaaggctcaacgctcgaaggaacaagccaacatcgt 485  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||||||||||| |||||||||||    
T  30001491 tattgttctgaatcggcaagaagaccaatcccatattgacatgtggactatacatacactgccttaaggctcgatgctcgaaggaacacgccaacatcgt 30001590  T
Q  486 gcaccacatcgcttccaggcacgcctctgcacgcggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttat 585  Q
    ||||| | ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  30001591 gcaccgcgtcgcttccaggcatgcctctgcacgcagatcactctacatgtgtcctctaaccgttccctaattatacgccgcaaaacctagaaacagttat 30001690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 484 - 761
Target Start/End: Original strand, 45258012 - 45258285
Alignment:
Q  484 gtgcaccacatcgcttccaggcacgcctctgcacgcggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggtt 583  Q
    ||||||| |||| | |||| ||||||||| |  || ||||||| || || |||||||||||||| |||||||| | |||||||||||| | || ||||||    
T  45258012 gtgcaccgcatcacatccaagcacgcctccgtgcgaggatcaccctgcatgtgtcctctaaccgctccctaatcacacgccgcaaaactcggagacggtt 45258111  T
Q  584 atcttcacatgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccatta 683  Q
    ||| ||||  |  || |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||   ||||| ||||||| |||| |||||    
T  45258112 atcgtcacgaggacctatataagggtgactttgcttcaccctcaaggtatgattcacttttcacaacactttc--gacacattctttcttagtttcatta 45258209  T
Q  684 ctgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatc 761  Q
    || |||| ||  ||| |||||||||||||||||| ||| |||||||||  ||||||||||||||||| ||||||||||    
T  45258210 cttacttgagctttggagtgttaacgtgcctgcagacatctttcgttc--caccgcgaagactcatcgccaccatatc 45258285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 594 - 813
Target Start/End: Complemental strand, 12169094 - 12168879
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgactt-aa 692  Q
    ||||| || |||||||| | |||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||| ||||||||||||||||| ||    
T  12169094 gcgcctatttaagggtggcattgcttcaccctcaaggtataattcacttttcacaacactttctac--acactctttcttagttccattactgacttgaa 12168997  T
Q  693 gtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaat 792  Q
    | |||| |||||||| ||||||||| |||||||||||||  |||||| |||||| ||| |||   || ||||| |  |||||||||||||||||||||      
T  12168996 gcgttggagtgttaatgtgcctgcagacacctttcgttc--caccgcaaagacttatcgcca-ggtaccggagcattttccgccactgttgcctctcatc 12168900  T
Q  793 catcttcatcggacatatcaa 813  Q
    |||||||| ||||||||||||    
T  12168899 catcttcaccggacatatcaa 12168879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 30001010 - 30001098
Alignment:
Q  1 gtggacttgaaatctatttagatagcttcacttaagaggtgtaggcacacatggatatattcccttcctcagaaacttcatgtttgtttg 90  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||    
T  30001010 gtggacttgaaatctatttagatagcttcacttaagaggtgtaggcacacatggatatattcctttcctc-gcaacttcatgtttgtttg 30001098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 504 - 734
Target Start/End: Complemental strand, 3586574 - 3586346
Alignment:
Q  504 gcacgcctctgcacgcggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaata 602  Q
    |||| |||| ||||| ||||||  ||||| ||||||||||||||| ||||| | | |||||||| |||| |||| |||||||   || |  ||||| |||    
T  3586574 gcacacctccgcacgaggatcatcctacatgtgtcctctaaccgt-ccctattcacacgccgcataaccaagaagcggttatgaccaacgcgcgcctata 3586476  T
Q  603 taagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagt 702  Q
    |||||||||  |||||||||||||||||||| ||||||||||| |||||||||||  || |||| ||||||||||||||||||||||| || || | |||    
T  3586475 taagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttct--actcactttttctcagttccattactgacttgagcgtcggagt 3586378  T
Q  703 gttaacgtgcctgcatacacctttcgttccac 734  Q
      ||||||||| |||| |||||||| ||||||    
T  3586377 cctaacgtgccggcatgcacctttcattccac 3586346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 600 - 756
Target Start/End: Original strand, 10923141 - 10923293
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||||||||||||||||| | | |||||||||| || ||||||||||||  ||||||| | |||||||| |||||||| ||||| |     
T  10923141 atataagggtgaacttgcttcaccctcaaggcacacttcacttttcacagcactttctacac--actctttataagttccataactgacttgagtgtcgg 10923238  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccacc 756  Q
    |||| |||||||||| ||||||||||||||||  ||||||||||||| |||||||||    
T  10923239 agtgataacgtgcctacatacacctttcgttc--caccgcgaagactaatcaccacc 10923293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 604 - 812
Target Start/End: Complemental strand, 45715106 - 45714902
Alignment:
Q  604 aagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtg 703  Q
    ||||||||||| |||||||| ||||||||| ||||| ||||| | ||||||| |||||||  |||||||||||| |||||||||||| || |||| ||||    
T  45715106 aagggtgacttagcttcaccttcaaggtatgattcaattttcaccacactttttacacac--tctttctcagtttcattactgacttgagcgttggagtg 45715009  T
Q  704 ttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatcatcttcatcg 803  Q
     |||||||||||||| ||||||||||||  ||||  ||||||||||| |||   || ||||| || |||||||| ||||||| ||||  |||| |||| |    
T  45715008 ctaacgtgcctgcatgcacctttcgttc--caccaggaagactcatcgccaatgtaccggagcactttccgccattgttgccactcatccatcctcattg 45714911  T
Q  804 gacatatca 812  Q
    |||| ||||    
T  45714910 gacaaatca 45714902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 520 - 750
Target Start/End: Complemental strand, 36267693 - 36267467
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatc-ttcacatgcgccaatataagggtgactttgct 618  Q
    ||||||| ||| ||||||| ||||||||| ||| ||| |||||||||| || |  || ||||||||| || ||   || | ||||||||||||  |||||    
T  36267693 ggatcaccctatacgtgtcttctaaccgt-cccaaatcatacgccgcataatcttgagacggttatccttgacgcacgtctatataagggtgaacttgct 36267595  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcat 718  Q
    ||||||||||||||| ||||||||||| |||| ||||||||  |||||||||||||||| |||||||||||| || |||| ||||||||| ||| ||||     
T  36267594 tcaccctcaaggtatgattcacttttcacaaccctttctac--acactctttctcagtttcattactgacttgagcgttggagtgttaacatgcatgcag 36267497  T
Q  719 acacctttcgttccacaccgcgaagactcatc 750  Q
     |||||||| |||  ||| |||||||||||||    
T  36267496 gcacctttcattc--cactgcgaagactcatc 36267467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 529 - 790
Target Start/End: Original strand, 27846424 - 27846681
Alignment:
Q  529 tacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgc--caatataagggtgactttgcttcaccctc 626  Q
    |||||||||||||||| ||||||||||| | || | |||||||||||| || ||||| ||| || |||   | || || |||||||||  ||||||||||    
T  27846424 tacacgtgtcctctaatcgttccctaatcacacac-gcaaaacccagagacagttat-ttctcaggcgtgtctatgtatgggtgacttaacttcaccctc 27846521  T
Q  627 aaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacaccttt 726  Q
    |||||| |||||||||| | |||||||||||  ||| ||| ||||||||||||||||||||||| |  |||| |||| |||||||||||||  ||| |||    
T  27846522 aaggtacaattcactttacacaacactttct--acaaactgtttctcagttccattactgacttgatcgttggagtgctaacgtgcctgcaggcactttt 27846619  T
Q  727 cgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctca 790  Q
    || |||| || ||||||||||||  ||||| || ||||  || ||||| |||||||||||||||    
T  27846620 cg-tcca-actgcgaagactcattgccaccgtaccggaacacattccgtcactgttgcctctca 27846681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 594 - 734
Target Start/End: Complemental strand, 15825275 - 15825137
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||| ||||||||  ||||||||||||||||||| |  | ||||||| |||||||||||||||||  ||||||||||||||||||| ||||| ||    
T  15825275 gcgcctatacaagggtgaacttgcttcaccctcaaggtacacatgacttttcacaacactttctacacac--tctttctcagttccattaccgacttgag 15825178  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
     ||  ||||| ||||||||||||| |||| |||||||||||    
T  15825177 cgtcaaagtgctaacgtgcctgcagacacatttcgttccac 15825137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 600 - 790
Target Start/End: Original strand, 12127639 - 12127825
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||||| |||| ||||||||||  ||| |||| ||||||||||| ||||||||||||||||||  | |||| |||| |||||||||||| || ||||     
T  12127639 atataaggttgacattgcttcaccaccaaagtatgattcacttttcacaacactttctacacaca--cgttcttagtttcattactgacttgagcgttgg 12127736  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctca 790  Q
    |||| |||||||||||||   |||||||||  | |||||||||||| |||||||||| || || || |  ||| |||| ||||||||||||    
T  12127737 agtgctaacgtgcctgcaggtacctttcgt--cccaccgcgaagacccatcaccaccgtaccgaagcattttctgccaatgttgcctctca 12127825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 520 - 812
Target Start/End: Original strand, 19918962 - 19919250
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcaca-tgcgccaatataagggtgactttgct 618  Q
    ||||||| ||| |||| ||||||||| ||||  |||| | ||||||||||| | |||  || ||||  ||||| |||||| ||||||| ||||  |||||    
T  19918962 ggatcacgctaaacgtatcctctaacagttct-taatcacacgccgcaaaatcgagaggcgattattctcacagtgcgcctatataagagtgatattgct 19919060  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcat 718  Q
    ||| ||||||||||| ||||||||||| |||||||||||  ||| ||||||||||| |||||||| ||||||  | |||  |||  ||| || ||||||     
T  19919061 tcatcctcaaggtatgattcacttttcacaacactttct--acatactctttctcatttccattattgactttggcgttagagttctaatgttcctgcag 19919158  T
Q  719 acacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatcatcttcatcggacatatca 812  Q
     ||||||||||||  |||| |||||||| ||| |||||||| ||||| || ||| |||||  ||||||||||  |||  ||| |||||||||||    
T  19919159 gcacctttcgttc--caccacgaagactgatcgccaccataccggagcactttctgccaccattgcctctcatccattctcaccggacatatca 19919250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 621 - 734
Target Start/End: Complemental strand, 20120441 - 20120330
Alignment:
Q  621 accctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatac 720  Q
    ||||||||||||| |||||||| || || |||||||  ||||||||||||||||||| |||||||||||| || || | |||| ||||||||||||| ||    
T  20120441 accctcaaggtatgattcacttatcacaccactttc--cacacactctttctcagtttcattactgacttgagagtcggagtgctaacgtgcctgcagac 20120344  T
Q  721 acctttcgttccac 734  Q
    ||||||||||||||    
T  20120343 acctttcgttccac 20120330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 601 - 710
Target Start/End: Complemental strand, 24499903 - 24499796
Alignment:
Q  601 tataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaa 700  Q
    |||||||||||  |||||||||||| ||||||| ||||||||||| ||||| |||||||  ||||||||||||| ||||||||||||||| || |||| |    
T  24499903 tataagggtgaacttgcttcacccttaaggtatgattcacttttcacaacattttctac--acactctttctcatttccattactgacttgagcgttgga 24499806  T
Q  701 gtgttaacgt 710  Q
    ||| ||||||    
T  24499805 gtgctaacgt 24499796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 594 - 750
Target Start/End: Complemental strand, 29711137 - 29710987
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||||||||  ||||||||||||||||||| |  ||||||||| ||||||||  |||||    ||| | ||| |||||||| |||||| ||    
T  29711137 gcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcgtacac----tctctttcaattccattagtgacttgag 29711042  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
     |||| |||| |||||||| ||||||||||||| ||||  |||||||||||| ||||    
T  29711041 cgttggagtgctaacgtgcatgcatacaccttttgttc--caccgcgaagacgcatc 29710987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 578 - 663
Target Start/End: Complemental strand, 23257918 - 23257834
Alignment:
Q  578 acggttatcttcacatgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacac 663  Q
    ||||||||  |||||  |||| ||||||||||||| ||| ||||||||||||||| |||||||||||| | |||||||||||||||    
T  23257918 acggttattctcacacacgcctatataagggtgaccttgattcaccctcaaggtacaattcacttttc-ccacactttctacacac 23257834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 683 - 734
Target Start/End: Complemental strand, 12634880 - 12634829
Alignment:
Q  683 actgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  12634880 actgacttaagagttggagtgttaacgtgcctgcatgcacctttcgttccac 12634829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 593 - 690
Target Start/End: Complemental strand, 18135993 - 18135898
Alignment:
Q  593 tgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    |||||| ||||||||||||  |||||||||| || |||||||  ||||||||  ||||||||  |||||||  |||||||||||||||||||| ||||    
T  18135993 tgcgcctatataagggtgaacttgcttcaccttctaggtatacatcacttttgacaacacttcttacacac--tctttctcagttccattactaactt 18135898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 600 - 663
Target Start/End: Complemental strand, 18772363 - 18772300
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacac 663  Q
    ||||||||||||  ||||||||||||||||||  |  ||||||||| |||||||||||||||||    
T  18772363 atataagggtgaacttgcttcaccctcaaggtgcacgtcacttttcacaacactttctacacac 18772300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 686
Target Start/End: Complemental strand, 18134423 - 18134349
Alignment:
Q  612 ctttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactg 686  Q
    |||| |||||||||||||||| |||||| ||||| ||| ||||| |  ||| ||||||||||| |||||||||||    
T  18134423 ctttacttcaccctcaaggtacaattcatttttcacaatactttttctacatactctttctcaattccattactg 18134349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 663 - 756
Target Start/End: Complemental strand, 30638617 - 30638526
Alignment:
Q  663 cactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccacc 756  Q
    |||||||||| ||||||||||||||| | || || |||||||||||||| ||| | ||| ||||| |||  |||||||| |||||| |||||||    
T  30638617 cactctttcttagttccattactgacatgagcgtcgaagtgttaacgtgtctgtagacatctttctttc--caccgcgatgactcaacaccacc 30638526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 15390555 - 15390624
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacac 663  Q
    ||||| ||||||||||||  ||||||||||||||||||| |  ||||||||| ||||||||  |||||||    
T  15390555 gcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacac 15390624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 664 - 731
Target Start/End: Complemental strand, 36022514 - 36022447
Alignment:
Q  664 actctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttc 731  Q
    |||||||||||||  || ||||||||| || |||  ||||||||||||||| |||| |||||||||||    
T  36022514 actctttctcagtctcaatactgacttgagcgttagagtgttaacgtgcctacatatacctttcgttc 36022447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 637 - 690
Target Start/End: Complemental strand, 18770392 - 18770341
Alignment:
Q  637 tcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    ||||||||| |||||||||||||||||  ||||||||| || ||||||||||||    
T  18770392 tcacttttcacaacactttctacacac--tctttctcaatttcattactgactt 18770341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 608 - 733
Target Start/End: Complemental strand, 24755575 - 24755452
Alignment:
Q  608 gtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaa 707  Q
    ||||||| |||||| | | ||||||  ||||||||||| ||||| |||||||  ||||| ||||  |||||||| |||||||| || |||| |||  |||    
T  24755575 gtgacttagcttcatcttaaaggtacgattcacttttcacaacaatttctac--acactttttcagagttccatcactgacttgagggttggagtactaa 24755478  T
Q  708 cgtgcctgcatacacctttcgttcca 733  Q
    ||||| || || || |||||||||||    
T  24755477 cgtgcttgtatgcaactttcgttcca 24755452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 660 - 734
Target Start/End: Complemental strand, 29137958 - 29137884
Alignment:
Q  660 acacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||||||||||||||||| ||||| |||||| || || |  ||| |||||| |||||| ||| ||||||||||||    
T  29137958 acacactctttctcagttgcattaatgacttgagcgtcggtgtgctaacgtacctgcagacatctttcgttccac 29137884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 6e-55; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 522 - 813
Target Start/End: Original strand, 3404760 - 3405047
Alignment:
Q  522 atcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgcttca 621  Q
    |||||||||||||||||||||||||  ||| |||| | |||| |||||||||||| |||||||| |||||| ||||| |||||||||| | ||  |||||    
T  3404760 atcactctacacgtgtcctctaaccactccttaatcacacgctgcaaaacccagagacggttattttcacacgcgcctatataagggtaatttaacttca 3404859  T
Q  622 ccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcataca 721  Q
    |||||||||||| ||||| ||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||  |||||||| |||||| || |||    
T  3404860 ccctcaaggtatgattcatttttcacaacactttct--acacactctttctcagttccattactgacttaagtgttagagtgttaatgtgcctacagaca 3404957  T
Q  722 cctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatcatcttcatcggacatatcaa 813  Q
    | ||||||  | ||  ||||||||||||||||||| ||  | |  || || | ||||||||| |||||| ||||| ||||| |||| |||||    
T  3404958 catttcgt--ctcattgcgaagactcatcaccaccgtactgaaacacatttcaccactgttgtctctcattcatcctcatcagacagatcaa 3405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 520 - 714
Target Start/End: Complemental strand, 19305659 - 19305467
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatc-ttcacatgcgccaatataagggtgactttgct 618  Q
    ||||||| ||||||||||||||||| | ||||||||| | || ||||||||| |  ||  | ||||| || ||  ||||| || |||||||||| |||||    
T  19305659 ggatcaccctacacgtgtcctctaatc-ttccctaatcacaccccgcaaaactcgaaagagtttatccttaactcgcgcctatttaagggtgaccttgct 19305561  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcct 714  Q
    ||||||||||||||| ||||||||||| |||||||||||||  |||||||| |||||||||||||||||||| || ||| ||||| ||||||||||    
T  19305560 tcaccctcaaggtatgattcacttttcacaacactttctac--acactcttactcagttccattactgacttgagcgtttaagtgctaacgtgcct 19305467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 531 - 796
Target Start/End: Complemental strand, 34187478 - 34187222
Alignment:
Q  531 cacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgcttcaccctcaagg 630  Q
    ||||||||||||||  | |||||||| | |||| ||| | ||| || ||||||||  |||| |  ||| ||||||||||||    |||||||||||||||    
T  34187478 cacgtgtcctctaattgatccctaatcacacgctgcatatcccggagacggttattctcacgtatgcctatataagggtga----gcttcaccctcaagg 34187383  T
Q  631 tataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgtt 730  Q
    || |||||||||| | | ||||||| |||||||  ||||||||||||||||||||||||| |||||||  ||| ||||||| ||||| ||||||||||||    
T  34187382 tacaattcacttt-caccacactttttacacac--tctttctcagttccattactgacttgagtgttggtgtgctaacgtgtctgcagacacctttcgtt 34187286  T
Q  731 ccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatcatc 796  Q
    |  |||||| |||||| ||||||||  || ||||  || ||||||| | ||||||||||| |||||    
T  34187285 c--caccgcaaagacttatcaccactgtagcggaacactttccgccgccgttgcctctcattcatc 34187222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 520 - 750
Target Start/End: Complemental strand, 18147501 - 18147275
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgc--caatataagggtgactttgc 617  Q
    |||||||  ||||| |||||||||||||| ||||||| | |||| ||||||||||||  ||||||    || ||||||  | ||||||||||||| ||||    
T  18147501 ggatcaccttacacatgtcctctaaccgt-ccctaatcacacgctgcaaaacccagaggcggttaatccca-atgcgcacctatataagggtgacattgc 18147404  T
Q  618 ttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgca 717  Q
    |||||||| ||||||| | ||||||||| |||||||||||||  |||||||||||| ||||||||| |||||| || |||| ||||||||||| ||| ||    
T  18147403 ttcaccctaaaggtatgagtcacttttcacaacactttctac--acactctttctcggttccattagtgacttgagcgttggagtgttaacgttcctaca 18147306  T
Q  718 tacacctttcgttccacaccgcgaagactcatc 750  Q
      |||||||||||   ||||| |||||||||||    
T  18147305 ggcacctttcgtt--tcaccgagaagactcatc 18147275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 520 - 748
Target Start/End: Complemental strand, 11087697 - 11087473
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaatataagggtgactttgct 618  Q
    ||||||| ||||||||||||||||||||| || |||||| |||||||| || || || || |||||  ||| |  || || ||||||||||||  ||| |    
T  11087697 ggatcaccctacacgtgtcctctaaccgt-ccttaattacacgccgcataatccggagacagttatgctcaacgcgcacctatataagggtgaacttgtt 11087599  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcat 718  Q
    ||| ||||||||||| ||||||||||| ||||||  |||||| ||  |||||||||||| ||||||||||||||| ||  ||||| ||| ||| |||||     
T  11087598 tcatcctcaaggtatgattcacttttcacaacacaatctacatac--tctttctcagttacattactgacttaagggtcaaagtgctaatgtgtctgcag 11087501  T
Q  719 acacctttcgttccacaccgcgaagactca 748  Q
    ||| |||||||||  |||||||||||||||    
T  11087500 acagctttcgttc--caccgcgaagactca 11087473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 600 - 734
Target Start/End: Complemental strand, 20148430 - 20148300
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||    ||||||||||||| |||||||||| |||| || | ||     
T  20148430 atataagggtgaccttgcttcaccatcaaggtatgattcacttttcacaacactttct----acactctttctcaattccattactaacttgagcgatgg 20148335  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| ||||||| |||||| ||| |||||||||||    
T  20148334 agtgctaacgtgtctgcatgcacttttcgttccac 20148300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 600 - 734
Target Start/End: Original strand, 22184398 - 22184528
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||    ||||||||||||| |||||||||| |||| || | ||     
T  22184398 atataagggtgaccttgcttcaccatcaaggtatgattcacttttcacaacactttct----acactctttctcaattccattactaacttgagcgatgg 22184493  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| ||||||| |||||| ||| |||||||||||    
T  22184494 agtgctaacgtgtctgcatgcacttttcgttccac 22184528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 594 - 783
Target Start/End: Complemental strand, 30681113 - 30680928
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| || ||| |||||| |||||||| ||||||||||| ||||||||||| ||| || ||||  |||| |||||| |||||| |||||||||||| ||    
T  30681113 gcgcctatctaaaggtgacattgcttcatcctcaaggtatgattcacttttcacaatacattct--acacgctctttatcagtttcattactgacttgag 30681016  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttg 783  Q
     |||| |||| |||||||  |||| |||||||||||  | ||||||||||||||||| ||||| || ||||| || | ||||||| ||||    
T  30681015 cgttggagtgctaacgtgattgcagacacctttcgt--cccaccgcgaagactcatctccaccttaccggagcacctcccgccaccgttg 30680928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 594 - 731
Target Start/End: Complemental strand, 34064316 - 34064181
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||||||||  ||||||||||||||||||| |  ||||||||| ||||||||  |  ||||||||||||| |||| |||||||||||| |     
T  34064316 gcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttctt--acacactctttcttagtttcattactgacttgaa 34064219  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttc 731  Q
     ||   |||||||||||||||||| |||||||||||||    
T  34064218 cgtcatagtgttaacgtgcctgcacacacctttcgttc 34064181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 590 - 690
Target Start/End: Original strand, 15480307 - 15480405
Alignment:
Q  590 acatgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgact 689  Q
    |||||| || ||||||||||||||| ||||||| |||||||||| ||||||||||| |||||||||||  ||||||| |||||||||| ||||| |||||    
T  15480307 acatgcacctatataagggtgacttagcttcactctcaaggtatgattcacttttcacaacactttct--acacactttttctcagtttcattattgact 15480404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 520 - 734
Target Start/End: Complemental strand, 22572239 - 22572028
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaatataagggtgactttgct 618  Q
    ||||||| | ||||||||||||||||||| ||||||| ||||  |||| ||||  || ||||||||  ||| |  |||||||||||| |||||  |||||    
T  22572239 ggatcaccccacacgtgtcctctaaccgt-ccctaatcatacttcgcataacctggagacggttatgctcaacgcgcgccaatataaaggtgaacttgct 22572141  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcat 718  Q
    ||||||||||| ||| ||||||||| | |||||| ||||  ||||||||||| ||| ||||||||||||| | || ||   |||| |||||||||||||     
T  22572140 tcaccctcaagatatgattcactttacacaacaccttct--acacactcttt-tcaattccattactgacatgagcgtcatagtgctaacgtgcctgcag 22572044  T
Q  719 acacctttcgttccac 734  Q
     ||||||| |||||||    
T  22572043 ccaccttttgttccac 22572028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 593 - 727
Target Start/End: Original strand, 689827 - 689958
Alignment:
Q  593 tgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaa 692  Q
    |||||| ||||||||||||| ||| | || ||||||||||  ||||||||||| ||||||||| ||||||||||  |||||||||||||||||||||| |    
T  689827 tgcgcctatataagggtgaccttgat-cagcctcaaggtacgattcacttttcacaacactttatacacacact--ttctcagttccattactgacttga 689923  T
Q  693 gtgttgaagtgttaacgtgcctgcatacacctttc 727  Q
    |  ||| |||| ||| || |||||| |||||||||    
T  689924 gcattgcagtgctaatgtacctgcaaacacctttc 689958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 588 - 726
Target Start/End: Original strand, 34572958 - 34573094
Alignment:
Q  588 tcacatgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactga 687  Q
    ||||| ||||| |||||||||||||||  |||||||||||| |||| ||||||||||| | |||||||||  ||||||| ||||| ||||| |||||| |    
T  34572958 tcacacgcgcctatataagggtgacttaacttcaccctcaatgtatgattcacttttcaccacactttct--acacactttttcttagttctattactaa 34573055  T
Q  688 cttaagtgttgaagtgttaacgtgcctgcatacaccttt 726  Q
    ||| || |||| ||| |||| ||| ||||| ||||||||    
T  34573056 cttgagcgttggagtattaatgtgtctgcagacaccttt 34573094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 520 - 708
Target Start/End: Complemental strand, 14268626 - 14268440
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgctt 619  Q
    |||||||  ||||||||||||||||||| |||||||| | |||||  ||| ||| ||||||||||||||     | ||| ||||||||||||||| ||||    
T  14268626 ggatcaccttacacgtgtcctctaaccgctccctaatcacacgccataaa-cccggaaacggttatctttgtgcgtgcctatataagggtgacttagctt 14268528  T
Q  620 caccc-tcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaac 708  Q
    ||||| ||| | ||| |||||||||||  ||||||||||||  ||||| | ||| ||||||||||||||||| || |||| |||| ||||    
T  14268527 cacccctcacgatatgattcacttttcaaaacactttctac--acactatgtcttagttccattactgacttcagcgttggagtgctaac 14268440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 601 - 755
Target Start/End: Original strand, 9277278 - 9277427
Alignment:
Q  601 tataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaa 700  Q
    ||||||||||| || |||||||||||||||||| |||||| |||| | ||||||| |  ||| ||||||||||||||||| ||||||||| || |||  |    
T  9277278 tataagggtgagttagcttcaccctcaaggtatgattcac-tttctccacacttttt--acatactctttctcagttccaatactgacttgagcgttata 9277374  T
Q  701 gtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccac 755  Q
    ||| ||||||| |||||   |||||||||||  |||||| ||||||| |||||||    
T  9277375 gtgctaacgtgtctgcaggaacctttcgttc--caccgcaaagactcctcaccac 9277427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 603 - 734
Target Start/End: Original strand, 31295514 - 31295643
Alignment:
Q  603 taagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagt 702  Q
    |||||||||  ||||||||||||| ||||| |  ||||||||| ||||||||  |||||  |||||||||||||| |||||||||||| || || |||||    
T  31295514 taagggtgaacttgcttcaccctcgaggtacatatcacttttcacaacacttcatacac--actctttctcagtttcattactgacttgagcgtcgaagt 31295611  T
Q  703 gttaacgtgcctgcatacacctttcgttccac 734  Q
    | |||| ||||||||  || ||||||||||||    
T  31295612 gctaacatgcctgcaggcaactttcgttccac 31295643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 588 - 734
Target Start/End: Original strand, 9291984 - 9292127
Alignment:
Q  588 tcacatgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactga 687  Q
    |||| |||||| |||||| ||||| || |||||||||||||||||| ||||||||||| | ||||||| |  ||| ||| ||||||||||||| ||||||    
T  9291984 tcacgtgcgcctatataaaggtgagttagcttcaccctcaaggtatgattcacttttc-ccacacttttt--acatactatttctcagttccaatactga 9292080  T
Q  688 cttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||| || |||   ||| |||||||| ||||  |||||||||||||||    
T  9292081 cttgagcgttagcgtgctaacgtgcttgcaggcacctttcgttccac 9292127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 594 - 734
Target Start/End: Original strand, 12424284 - 12424422
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||||||||  |||||||||||| |||||| |   |||||||| ||||||||| || ||   ||||  |||||||||||||||||||| |     
T  12424284 gcgcctatataagggtgaacttgcttcacccttaaggtacacaacacttttcacaacactttttagactttctct--ctcagttccattactgacttgat 12424381  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||| | |||| |||||||||||||  |||||||||||||||    
T  12424382 tgtcgtagtgctaacgtgcctgcaggcacctttcgttccac 12424422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 594 - 734
Target Start/End: Original strand, 27860918 - 27861056
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||| ||||||||  ||||||||||||||| ||| |  ||||||||| ||||||||  ||||| | |||||||  ||||||||||||||||| ||    
T  27860918 gcgcctataaaagggtgaacttgcttcaccctcaaagtacacatcacttttcacaacacttcttacactctctctttc--agttccattactgacttgag 27861015  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||  |||  |||| |||||||| |||||||| |||||||    
T  27861016 tgttagagtactaacatgcctgcagacaccttttgttccac 27861056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 594 - 734
Target Start/End: Complemental strand, 33596982 - 33596844
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||| ||||  |||||||| ||||||||||| ||||  ||||| |||||||||||||  ||||| ||||| |||| ||||||||| || ||    
T  33596982 gcgcctatataagagtgaacttgcttcatcctcaaggtatgattccattttcacaacactttctac--acactttttcttagtttcattactgagttgag 33596885  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
     |||  |||||||| |||||||||   ||||||||||||||    
T  33596884 cgttagagtgttaatgtgcctgcaggtacctttcgttccac 33596844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 600 - 750
Target Start/End: Original strand, 22497274 - 22497420
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||| ||||||  ||||||||||||||||||| |   |||||||| ||||||||| || || | ||||||||  |||||||||||||||| || || |     
T  22497274 atatatgggtgaacttgcttcaccctcaaggtacacaacacttttcacaacactttttatactctctctttct--gttccattactgacttgagcgtcgg 22497371  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
    |||| ||||||| |||||  ||||||||||||  || ||||||||||||||    
T  22497372 agtgctaacgtgtctgcaagcacctttcgttc--catcgcgaagactcatc 22497420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 609 - 715
Target Start/End: Original strand, 4251029 - 4251133
Alignment:
Q  609 tgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaac 708  Q
    ||||||||||||||||||||| ||| ||| ||||||| ||||||| |||   |||||||||||||| || |||||||||||| |  |||| ||||||| |    
T  4251029 tgactttgcttcaccctcaagatatgatttacttttcacaacactctct--ccacactctttctcattttcattactgacttgaacgttggagtgttatc 4251126  T
Q  709 gtgcctg 715  Q
    |||||||    
T  4251127 gtgcctg 4251133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 718
Target Start/End: Original strand, 19730567 - 19730683
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||||||||||||||||||| |  ||||||| | | ||||||  |  |||||||||||||||||||||||| |||||| || ||||     
T  19730567 atataagggtgaacttgcttcaccctcaaggtacacatcactttacacgacacttctt--acacactctttctcagttccattattgacttgagcgttgg 19730664  T
Q  700 agtgttaacgtgcctgcat 718  Q
    |||| |||| |||||||||    
T  19730665 agtgctaacatgcctgcat 19730683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 660 - 734
Target Start/End: Original strand, 25008424 - 25008498
Alignment:
Q  660 acacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||||||||||||| ||||||||||||||| || |||| ||||||||||||||  ||| |||||||||| ||||    
T  25008424 acacactctttctcaattccattactgacttgagcgttggagtgttaacgtgccgacatgcacctttcgtcccac 25008498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 600 - 716
Target Start/End: Complemental strand, 9403287 - 9403173
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||||||||||||||||||| |  ||||||| | ||||||||  |||||||  |||||||||||||||||| |||||| || || |     
T  9403287 atataagggtgaacttgcttcaccctcaaggtacacatcactttccacaacacttcttacacac--tctttctcagttccattattgacttgagcgtcgg 9403190  T
Q  700 agtgttaacgtgcctgc 716  Q
    |||  ||||||||||||    
T  9403189 agttctaacgtgcctgc 9403173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 753
Target Start/End: Original strand, 12449553 - 12449708
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| |||||||||| |  ||| ||||||||||||||| |  ||||||| | ||||||||  |||||  ||||||| |||| |||||||||||||| ||    
T  12449553 gcgcctatataagggtaaacttgattcaccctcaaggtacacatcactttccacaacacttcttacac--actctttttcagctccattactgacttgag 12449650  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcacc 753  Q
     ||   |||| |||||||||| || |||||||||||  | |||| |||||||||||||||    
T  12449651 cgtcagagtgctaacgtgcctacagacacctttcgt--cccaccacgaagactcatcacc 12449708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 594 - 690
Target Start/End: Complemental strand, 16131089 - 16130995
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    ||||| |||||||||| |  ||| |||||||||||||||| |||||| |||| |||||||||||    ||||||||| |||||||||||||||||||    
T  16131089 gcgcctatataagggtaaacttgtttcaccctcaaggtatgattcacgtttcacaacactttct--gtacactctttatcagttccattactgactt 16130995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 595 - 690
Target Start/End: Complemental strand, 17380217 - 17380124
Alignment:
Q  595 cgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    |||| ||||||||||||| |||| ||| ||| ||||||  ||||||||||| ||||||||  ||  |||||||||||||||||| |||||||||||    
T  17380217 cgcctatataagggtgaccttgcgtcaacctgaaggtaagattcacttttcacaacactt--tattcacactctttctcagttctattactgactt 17380124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 594 - 685
Target Start/End: Original strand, 19277046 - 19277135
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattact 685  Q
    ||||| ||||||||||||  ||||||||||||||||||| |  ||||||||| ||||||||  |  ||||||||||||||| ||||||||||    
T  19277046 gcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttctt--acacactctttctcatttccattact 19277135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 600 - 690
Target Start/End: Original strand, 10115661 - 10115749
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    |||||||| |||||| ||||||||||| |||||| ||||||||||| ||| ||||| |  || | ||||||||||||| ||||||||||||    
T  10115661 atataaggctgacttagcttcaccctcgaggtatgattcacttttcacaaaacttttt--actcgctctttctcagtttcattactgactt 10115749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 601 - 660
Target Start/End: Original strand, 12203615 - 12203674
Alignment:
Q  601 tataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctaca 660  Q
    ||||||||||||||  |||||||||||| |||| ||||||||||| ||||||||||||||    
T  12203615 tataagggtgacttaacttcaccctcaaagtatgattcacttttcacaacactttctaca 12203674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 670 - 756
Target Start/End: Complemental strand, 16343626 - 16343542
Alignment:
Q  670 tctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccacc 756  Q
    ||||||||||||||||||||| ||||||| |||| |||||||||||||  |||| |||| ||  ||| ||||||||||||| |||||    
T  16343626 tctcagttccattactgacttgagtgttggagtgctaacgtgcctgcaggcacccttcgctc--cactgcgaagactcatcgccacc 16343542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 614 - 731
Target Start/End: Complemental strand, 18566758 - 18566643
Alignment:
Q  614 ttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcc 713  Q
    |||| |||||||||||||| | |||||||||  |||| |||||||||||   ||||||||||||||||||||||||  ||| | |  ||| |||||| ||    
T  18566758 ttgcctcaccctcaaggtagacttcactttttacaacgctttctacacaa--tctttctcagttccattactgactccagtctcgttgtgctaacgtacc 18566661  T
Q  714 tgcatacacctttcgttc 731  Q
    |||| |||||||| ||||    
T  18566660 tgcagacaccttttgttc 18566643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 665 - 752
Target Start/End: Original strand, 19331719 - 19331804
Alignment:
Q  665 ctctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcac 752  Q
    |||||||| |||||||||||||||||||| || | |||  |||||| ||||||  ||||||||||||  |||||||||||||| ||||    
T  19331719 ctctttcttagttccattactgacttaagcgtcggagtactaacgtacctgcaagcacctttcgttc--caccgcgaagactcgtcac 19331804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 594 - 683
Target Start/End: Original strand, 31423807 - 31423894
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccatta 683  Q
    ||||| |||||||||||   ||||||||||||||||  || |||||||| || |||||||||||  ||| |||||||||||||| |||||    
T  31423807 gcgcctatataagggtgcacttgcttcaccctcaagacatgattcacttctcacaacactttct--acatactctttctcagtttcatta 31423894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 616 - 729
Target Start/End: Original strand, 10926886 - 10926997
Alignment:
Q  616 gcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctg 715  Q
    ||||||||| |||| ||||||||||||||| | ||||||| ||| ||| || ||||||||||||| |||||| ||  | ||||| ||| ||||||| |||    
T  10926886 gcttcacccccaagatataattcacttttc-ccacactttttacgcactct-tttctcagttccaatactgaattgggcgttgaggtgctaacgtgtctg 10926983  T
Q  716 catacacctttcgt 729  Q
    |||  |||||||||    
T  10926984 catgaacctttcgt 10926997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 404 - 472
Target Start/End: Original strand, 10115529 - 10115597
Alignment:
Q  404 agaagaccaatcccatattgacacgtggactatacatacactgccttaaggctcaacgctcgaaggaac 472  Q
    ||||||||||||| || |||||| ||||||||| ||||| | | ||||||||||||||  |||||||||    
T  10115529 agaagaccaatcctatgttgacatgtggactattcatacgccgtcttaaggctcaacgtccgaaggaac 10115597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 643
Target Start/End: Original strand, 27772541 - 27772584
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttt 643  Q
    ||||||||||||| |||||||||| ||||||||| |||||||||    
T  27772541 atataagggtgaccttgcttcaccttcaaggtatgattcacttt 27772584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 645
Target Start/End: Complemental strand, 22692207 - 22692162
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttc 645  Q
    |||||| |||||||| |||||||||||||| ||| |||||||||||    
T  22692207 atataaaggtgacttagcttcaccctcaagttatgattcacttttc 22692162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 3e-50; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 408 - 790
Target Start/End: Complemental strand, 16030702 - 16030324
Alignment:
Q  408 gaccaatcccatattgacacgtggactatacatacactgccttaaggctcaacgctcgaaggaacaagccaacatc-gtgcaccacatcgcttccaggca 506  Q
    |||||||||| ||||||||||||||| |||||| ||| ||||||||||| || ||  ||||||||| |  ||| |  |||||||  ||||| |||| |||    
T  16030702 gaccaatcccctattgacacgtggacaatacatgcaccgccttaaggcttaatgcctgaaggaacacgaaaactttagtgcaccgtatcgcatccaagca 16030603  T
Q  507 cgcctctgcacgcggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataag 606  Q
     ||||| || || |||||| |||| |||||| ||||||||| |||||||| | ||||| ||||| || ||   | |||||||||  |||||| |||||||    
T  16030602 tgcctccgcgcgtggatcattctaaacgtgttctctaaccgctccctaatcacacgccacaaaatccggagtag-ttatcttcatgtgcgcctatataag 16030504  T
Q  607 ggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgtta 706  Q
    |||| ||| ||||| |||||||||||| ||||||||||| |||||||||||||  ||||||||  ||||||||||||||||||| ||  ||  | || ||    
T  16030503 ggtggcttagcttcgccctcaaggtatgattcacttttcacaacactttctac--acactcttattcagttccattactgacttgagcatttgactgata 16030406  T
Q  707 acgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctca 790  Q
    ||||||||||| ||||||||| |||  ||||| ||||||||||| |||||  |||| || || |||||||| ||||||| ||||    
T  16030405 acgtgcctgcagacacctttcattc--caccgtgaagactcatcgccaccgcatcgaagaacattccgccattgttgccactca 16030324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 594 - 734
Target Start/End: Complemental strand, 26977861 - 26977723
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| |||||||||| |  |||||||||||||||||||| ||||| ||||| ||| |||||||||||||  |||||||| |||||||||||||||| ||    
T  26977861 gcgcctatataagggtcaaattgcttcaccctcaaggtatgattcatttttcacaatactttctacacac--tctttctcggttccattactgacttgag 26977764  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
     |||| |||| |||||||||||||  |||||||||||||||    
T  26977763 cgttggagtgctaacgtgcctgcaggcacctttcgttccac 26977723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 600 - 734
Target Start/End: Complemental strand, 12177501 - 12177369
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||||| |||  |||||||  ||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||| ||||| |     
T  12177501 atataaggttgaacttgcttcctcctcaaggtataattcacttttcacaacactttctacacac--tctttctcagttccattactgacttgagtgtcgg 12177404  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| |||||||| || |  |||||||||||||||    
T  12177403 agtgctaacgtgcatgtaggcacctttcgttccac 12177369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 600 - 789
Target Start/End: Complemental strand, 5671885 - 5671700
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||| |||||||  ||||||| |||| |||| ||||||||||| |||||||||||||||||  |||||||||||||||||||| |||| || ||||     
T  5671885 atataagagtgacttaacttcaccttcaatgtatgattcacttttcacaacactttctacacac--tctttctcagttccattactaacttgagcgttgg 5671788  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctc 789  Q
    |||| |||||||||| || |||||||| | ||  || || | ||||||||| ||||| |||| ||| |  |||| |||||||||||||||    
T  5671787 agtgctaacgtgcctacaaacaccttttgctc--cagcgggcagactcatcgccaccgtatcagagcattttccaccactgttgcctctc 5671700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 600 - 764
Target Start/End: Complemental strand, 16050509 - 16050349
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||| | |||||||| |||||||||||  |||||||||| | |||||||||||||||  |||||||||||||||| | |||||| || ||||     
T  16050509 atataagggtggcattgcttcatcctcaaggtatggttcacttttcaccacactttctacacac--tctttctcagttccatcaatgacttgagcgttgg 16050412  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcgga 764  Q
    |||| ||||||||||||| | |||||||  ||  ||||||||||||||||| |||| ||| ||||    
T  16050411 agtgctaacgtgcctgcagatacctttctatc--caccgcgaagactcatcgccactataccgga 16050349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 602 - 790
Target Start/End: Original strand, 33101485 - 33101669
Alignment:
Q  602 ataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaag 701  Q
    |||| |||||| ||| |||||||||||| ||   |||||||||| |||||||||||||||||  | ||||||||||||||||| ||||| || |||| ||    
T  33101485 ataaaggtgacattgtttcaccctcaagttacggttcacttttcacaacactttctacacac--tttttctcagttccattaccgacttgagcgttggag 33101582  T
Q  702 tgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctca 790  Q
    || |||||||||||||| |||||||| ||| |||  |||||||||||||| |||  || || |  || |||||||| ||||||||||||    
T  33101583 tgctaacgtgcctgcatgcacctttcattctaca--gcgaagactcatcaacactgtaccgaaacactttccgccagtgttgcctctca 33101669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 600 - 787
Target Start/End: Complemental strand, 18246257 - 18246075
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||||||||||||  ||||||||||||||||| | ||||||||| || |||||| || ||||  ||||||||| ||| | |||| |||| || ||||     
T  18246257 atataagggtgacttatcttcaccctcaaggtatgaatcacttttctca-cactttttatacac--tctttctcaattctaatactcacttgagcgttgg 18246161  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctc 787  Q
    ||||||||||||| | || |||||||||||||  |||||| |||||||||||||||| || | |||||  ||||||||  ||||||||    
T  18246160 agtgttaacgtgcttacagacacctttcgttc--caccgccaagactcatcaccaccgtaccagagtatcttccgccatcgttgcctc 18246075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 529 - 731
Target Start/End: Original strand, 2140853 - 2141049
Alignment:
Q  529 tacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgcttcaccctcaa 628  Q
    ||||||||||||||||||||| |||||| | || || ||||||||  ||  ||||||  ||||  ||| |  |||||||||||||| |||||||||||||    
T  2140853 tacacgtgtcctctaaccgtttcctaatcacacaccacaaaacccgaaagtggttattctcacgcgcgtctttataagggtgacttagcttcaccctcaa 2140952  T
Q  629 ggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcg 728  Q
    |||||  |||||||| | ||||||||||||||||      ||||   ||| ||||||||||| || |||| |||| |||  |||||||||||||||||||    
T  2140953 ggtatggttcactttccacaacactttctacaca------ttcttttttcaattactgacttgagcgttggagtgctaagttgcctgcatacacctttcg 2141046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 600 - 734
Target Start/End: Complemental strand, 34273202 - 34273070
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||| ||| |||||||||||||||||||| | ||||||| | |||||||||||||  |||||||||||||||||| |||||||||| ||  |||     
T  34273202 atataagggcgacattgcttcaccctcaaggtatgagtcactttacacaacactttctac--acactctttctcagttccgttactgacttgagcattgg 34273105  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| |||||||| ||||   ||||||||| ||||    
T  34273104 agtgctaacgtgcttgcaggtacctttcgtcccac 34273070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 593 - 750
Target Start/End: Original strand, 23728789 - 23728941
Alignment:
Q  593 tgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaa 692  Q
    |||||| ||||||||||||  ||| ||||||||||||||| |  ||||||||| ||||||||  |  ||||||||||||||| |||||||| |||||| |    
T  23728789 tgcgcctatataagggtgaacttgtttcaccctcaaggtacacatcacttttcacaacacttctt--acacactctttctcatttccattaatgacttga 23728886  T
Q  693 gtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
    | ||   | || |||||||||||||| |||||||||||   |||||||||||||||||    
T  23728887 gcgtcataatgctaacgtgcctgcatccacctttcgtt---caccgcgaagactcatc 23728941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 595 - 733
Target Start/End: Complemental strand, 52565700 - 52565564
Alignment:
Q  595 cgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagt 694  Q
    ||||||||||||| |||  |||||||||||||||| ||| ||||||||||| |||||||||||   | |||||||| |||||||| |||||||||| ||     
T  52565700 cgccaatataaggatgaacttgcttcaccctcaagttatgattcacttttcacaacactttct--gcgcactctttttcagttcctttactgacttgagc 52565603  T
Q  695 gttgaagtgttaacgtgcctgcatacacctttcgttcca 733  Q
    ||   |||| ||||||| |||||  ||||||||||||||    
T  52565602 gtcagagtgctaacgtgtctgcaggcacctttcgttcca 52565564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 614 - 750
Target Start/End: Complemental strand, 22414876 - 22414744
Alignment:
Q  614 ttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcc 713  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||  ||||| ||| |||||| |||||||||||| || ||   |||| |||||||||    
T  22414876 ttgcttcaccctcaagatatgattcacttttcacaacactttctac--acactttttttcagtttcattactgacttgagcgtcagagtgctaacgtgcc 22414779  T
Q  714 tgcatacacctttcgttccacaccgcgaagactcatc 750  Q
    |||   ||||||||||||  |||||| ||||||||||    
T  22414778 tgcgggcacctttcgttc--caccgcaaagactcatc 22414744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 600 - 733
Target Start/End: Original strand, 23280238 - 23280367
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||| |||||  |||||||||||||| || || ||||||||||| ||||||| |    |||||| |||||||||||||||||||||||| || |||      
T  23280238 atataaaggtgaacttgcttcaccctcatggcattattcacttttcacaacactat----acacacactttctcagttccattactgacttgagagtttg 23280333  T
Q  700 agtgttaacgtgcctgcatacacctttcgttcca 733  Q
    |||| |||| || |||||  ||||||||||||||    
T  23280334 agtgataacatgtctgcaggcacctttcgttcca 23280367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 604 - 734
Target Start/End: Complemental strand, 25408207 - 25408079
Alignment:
Q  604 aagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtg 703  Q
    ||||||||  ||||||||||||||||| | |  ||||||||| ||||||||  ||||||| |||||  |||||| |||||||||||| ||  ||| ||||    
T  25408207 aagggtgaacttgcttcaccctcaagggacacatcacttttcacaacacttcttacacactctctt--tcagtttcattactgacttgagcattggagtg 25408110  T
Q  704 ttaacgtgcctgcatacacctttcgttccac 734  Q
     ||||||| |||||  |||||||| ||||||    
T  25408109 ctaacgtgtctgcaggcacctttcattccac 25408079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 534 - 790
Target Start/End: Original strand, 5459619 - 5459870
Alignment:
Q  534 gtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgcttcaccctcaaggtat 633  Q
    ||||||| |||| | |||||||| | |||||||||||| | |  ||||||||  ||||  ||| | || | ||| ||||||  ||||| || ||| ||||    
T  5459619 gtgtcctttaactgctccctaatcacacgccgcaaaacacggtgacggttattctcacgcgcgtctatgttaggctgacttaacttcatccccaatgtat 5459718  T
Q  634 aattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttcca 733  Q
     ||||||||| | |||||||||||  |||||||||||||||| ||| ||||||  || |  |||| |||| |||||| ||||||| ||||||||||  |     
T  5459719 gattcactttacacaacactttct--acacactctttctcag-tccgttactgttttgaacgttggagtgctaacgtacctgcatgcacctttcgt--cc 5459813  T
Q  734 caccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctca 790  Q
    |||| |||||||||||| ||||| || | ||| || ||||||||  || ||||||||    
T  5459814 caccacgaagactcatcgccaccgtaccagagcacattccgccatcgtcgcctctca 5459870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 600 - 746
Target Start/End: Original strand, 4601463 - 4601605
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||||||||||||||||| | |  |||  |||| || |||||  ||||||   | |||||||||| |||||||||||| || || |     
T  4601463 atataagggtgaacttgcttcaccctcaagggacacatcaaatttcacagcacttattacacat--tatttctcagtttcattactgacttgagcgtcgg 4601560  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagact 746  Q
    |||| |||||||||||||  ||||||||||||  |||||||||||||    
T  4601561 agtgctaacgtgcctgcagtcacctttcgttc--caccgcgaagact 4601605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 600 - 734
Target Start/End: Original strand, 1659765 - 1659897
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||||| ||||| |||| |||   ||||||||| ||||||||  ||||||   |||||||||| ||||||| |||||| || ||||     
T  1659765 atataagggtgaacttgctccacccacaagatatttctcacttttcacaacacttcttacacat--tctttctcagatccattattgacttgagcgttgg 1659862  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| |||||||  || | ||||||||||||||||    
T  1659863 agtgataacgtgtatgtagacacctttcgttccac 1659897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 663 - 733
Target Start/End: Complemental strand, 16522829 - 16522759
Alignment:
Q  663 cactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttcca 733  Q
    |||||||||||| |||| ||| |||||| |  ||||||||| |||||||||| || |||||||||||||||    
T  16522829 cactctttctcaattcctttattgacttgaacgttgaagtgctaacgtgccttcagacacctttcgttcca 16522759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 595 - 735
Target Start/End: Original strand, 21682561 - 21682699
Alignment:
Q  595 cgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagt 694  Q
    |||| |||||||||||| ||||| |||||||||||||| |  | ||||||| ||| | ||  ||||||| ||| |||| ||||||||||||||||| ||     
T  21682561 cgcctatataagggtgaatttgcgtcaccctcaaggtacacattacttttcacaatatttcttacacactctc-ttct-agttccattactgacttgagc 21682658  T
Q  695 gttgaagtgttaacgtgcctgcatacacctttcgttccaca 735  Q
    |||| ||||  ||||| |||  |  ||||||||||||||||    
T  21682659 gttggagtgcaaacgtacctataggcacctttcgttccaca 21682699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 670 - 733
Target Start/End: Complemental strand, 3590874 - 3590811
Alignment:
Q  670 tctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttcca 733  Q
    ||||||||||||||||||||| |  || | |||| ||| |||||||||| ||||||||||||||    
T  3590874 tctcagttccattactgacttgatcgtcggagtgctaaggtgcctgcatgcacctttcgttcca 3590811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 578 - 645
Target Start/End: Complemental strand, 8019085 - 8019018
Alignment:
Q  578 acggttatcttcacatgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttc 645  Q
    ||||||||  |||||  |||| ||||||||||||| | ||||||||| |||||||| |||||||||||    
T  8019085 acggttattctcacacacgcctatataagggtgacatagcttcacccccaaggtatgattcacttttc 8019018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 660 - 750
Target Start/End: Original strand, 14255064 - 14255152
Alignment:
Q  660 acacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
    |||||||||||||||||| ||||| |||||| || |||| |||| || ||||| ||||  |||| |||||||  |||| ||||||||||||    
T  14255064 acacactctttctcagtttcattaatgacttgagcgttggagtgctatcgtgcttgcaggcacccttcgttc--caccacgaagactcatc 14255152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 1659544 - 1659597
Alignment:
Q  378 aaaataattattgttctgaaccggcaagaagaccaatcccatattgacacgtgg 431  Q
    ||||| ||||||||||||||||||  |||||||||||| ||  |||||||||||    
T  1659544 aaaattattattgttctgaaccggtcagaagaccaatcacacgttgacacgtgg 1659597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 663
Target Start/End: Original strand, 12032223 - 12032291
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacac 663  Q
    ||||| ||||||||||||||| | |||||| ||||| ||| ||||| ||| | |||||||||||||||||    
T  12032223 gcgcctatataagggtgacttagtttcacc-tcaagttatgattcattttacacaacactttctacacac 12032291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 3e-44; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 484 - 726
Target Start/End: Complemental strand, 47253508 - 47253268
Alignment:
Q  484 gtgcaccacatcgcttccaggcacgcctctgcacgcggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggtt 583  Q
    |||||||||||| | |||| | ||||||| || || ||||||||||||| |||||||||||  | || ||||| | || ||||||||||| || || |||    
T  47253508 gtgcaccacatcacatccaagtacgcctccgcgcgaggatcactctacatgtgtcctctaattgctctctaatcacacaccgcaaaacccggagacagtt 47253409  T
Q  584 atcttcacatgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccatta 683  Q
    ||  |||   ||||| ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||||    
T  47253408 attatcatgcgcgcctatataagggtgacttagcttcaccctcaaggtatgattcacttttcacaacacttttt--acacactctttctcagttccatta 47253311  T
Q  684 ctgacttaagtgttgaagtgttaacgtgcctgcatacaccttt 726  Q
    ||||||| || |||| |||| |||| ||||||||  |||||||    
T  47253310 ctgacttgagcgttggagtgctaacatgcctgcaagcaccttt 47253268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 602 - 750
Target Start/End: Complemental strand, 12683898 - 12683754
Alignment:
Q  602 ataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaag 701  Q
    ||||||||||  |||||||||||| ||||||| ||||||||||| |||||||||||||||||  |||||||||||| ||||||| |||| || |||| ||    
T  12683898 ataagggtgaacttgcttcacccttaaggtatgattcacttttcacaacactttctacacac--tctttctcagtttcattactaacttgagcgttggag 12683801  T
Q  702 tgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
    || |||||||||||||  ||||||||||||  |||||| ||||||||||    
T  12683800 tgctaacgtgcctgcaggcacctttcgttc--caccgcaaagactcatc 12683754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 528 - 734
Target Start/End: Complemental strand, 29157289 - 29157085
Alignment:
Q  528 ctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttc-acatgcgccaatataagggtgactttgcttcaccctc 626  Q
    ||||| ||||||||||||||| ||||||| ||  |||||| |||||||| ||||||||| || ||  ||||| ||||||||||||  || ||||||| ||    
T  29157289 ctacatgtgtcctctaaccgt-ccctaatcattagccgcataacccagagacggttatcctctacgcgcgcctatataagggtgaacttacttcaccatc 29157191  T
Q  627 aaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacaccttt 726  Q
    |||||||  |||||||| | |||||||| ||||||||  | |||||||||||||||||| |||| || |||| ||||  |||||| |||||| |||||||    
T  29157190 aaggtatggttcactttacacaacacttactacacac--tttttctcagttccattactaacttgagcgttggagtgcaaacgtgtctgcatgcaccttt 29157093  T
Q  727 cgttccac 734  Q
    ||||||||    
T  29157092 cgttccac 29157085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 529 - 816
Target Start/End: Complemental strand, 10982050 - 10981769
Alignment:
Q  529 tacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgcttcaccctcaa 628  Q
    |||| |||||||||||||| |||||||| | | |||||| | ||| ||  |||||||  |||||  || | ||||||||||||||| | ||| ||| |||    
T  10982050 tacatgtgtcctctaaccgctccctaatcacaagccgcatatcccggaggcggttattctcacacacgtctatataagggtgacttagtttctccc-caa 10981952  T
Q  629 ggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcg 728  Q
     |||| ||||||||||| || |||||| |||||||  |||||||| |||||||||||||||| ||||||| ||||  |||||  |||||  |||||||||    
T  10981951 tgtatgattcacttttccca-cactttttacacac--tctttctcggttccattactgacttgagtgttggagtgccaacgttgctgcaggcacctttcg 10981855  T
Q  729 ttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatcatcttcatcggacatatcaacta 816  Q
    |  | ||| |||||||||||||| |||| ||  |||| || |||| ||| ||||||||||||  |||| |||||||||| ||||||||    
T  10981854 t--cccactgcgaagactcatcatcaccgtactggagcacattccaccattgttgcctctcatccatcctcatcggacagatcaacta 10981769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 594 - 750
Target Start/End: Complemental strand, 19809822 - 19809671
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| || |||||||||||| | |||||||||||||||||||||||||||| |||||||||||||  ||||||||||| |||| |||||||||||| ||    
T  19809822 gcgcctatgtaagggtgacttagtttcaccctcaaggtataattcacttttcacaacactttctac--acactctttcttagtttcattactgacttgag 19809725  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
     |||| |||| |||| || |||||   |||||||||  || ||||||||||||||||    
T  19809724 cgttggagtgctaacatgtctgcaggaacctttcgt--ca-accgcgaagactcatc 19809671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 595 - 693
Target Start/End: Complemental strand, 19643822 - 19643726
Alignment:
Q  595 cgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    |||| ||||||||||||  ||| |||||||||||||||| ||||||||||| ||| |||||||||  ||||||||||||||||||||||||||||||||    
T  19643822 cgcctatataagggtgaacttgtttcaccctcaaggtatgattcacttttcacaagactttctac--acactctttctcagttccattactgacttaag 19643726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 520 - 728
Target Start/End: Original strand, 2674470 - 2674672
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaatataagggtgactttgct 618  Q
    ||||||| |||||||||||||||||| || ||||||| | ||||||||||| || || ||||||||  ||| |  ||||  ||||||||||||  || ||    
T  2674470 ggatcaccctacacgtgtcctctaactgt-ccctaatcacacgccgcaaaatccggagacggttatgctcaacgcgcgcttatataagggtgaacttact 2674568  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcat 718  Q
    ||| ||||||||||| ||||||||||| |||||||||||||||||      |||||||| ||||| ||||||  | |||| |||| |||| || ||||||    
T  2674569 tcatcctcaaggtatgattcacttttcacaacactttctacacac------tctcagttacattattgacttgtgcgttggagtgctaacatgactgcat 2674662  T
Q  719 acacctttcg 728  Q
    ||||||||||    
T  2674663 acacctttcg 2674672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 600 - 734
Target Start/End: Original strand, 15514537 - 15514669
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||||||||||||||||||| |  ||||||| | ||||||||  |||||  ||||||| ||||||||||||||||||| || ||||     
T  15514537 atataagggtgaacttgcttcaccctcaaggtacacatcactttccacaacacttcttacac--actctttttcagttccattactgacttgagcgttgg 15514634  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| |||||||||| ||  |||| ||||||||||    
T  15514635 agtgctaacgtgcctacaggcacccttcgttccac 15514669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 594 - 733
Target Start/End: Complemental strand, 5518661 - 5518524
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||||||||  |||||||||||||||||||    ||||||| | ||||||||  |  ||||| ||| ||||||||| ||||||||||| ||    
T  5518661 gcgcctatataagggtgaacttgcttcaccctcaaggtacgcatcactttccacaacacttctt--acacattctctctcagttcaattactgacttgag 5518564  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttcca 733  Q
     ||||||||| ||||||| |||||  ||||||||||||||    
T  5518563 cgttgaagtgctaacgtgtctgcactcacctttcgttcca 5518524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 594 - 750
Target Start/End: Original strand, 15742123 - 15742275
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| |||||||||||| |||||||||  ||||||||| |  ||||||||| ||||||||  |||||||  | ||||||||||||||||||||||| ||    
T  15742123 gcgcctatataagggtgaatttgcttcagtctcaaggtacacatcacttttcacaacacttcttacacac--tttttctcagttccattactgacttgag 15742220  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
     ||   |||| ||||||||| |||  ||||||||| ||  |||| ||||||||||||    
T  15742221 cgtaagagtgctaacgtgccagcaggcacctttcgctc--caccacgaagactcatc 15742275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 600 - 731
Target Start/End: Original strand, 14601991 - 14602120
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||||| |||  ||||||||||||||||||| |   |||||||| ||||||||  ||||||| |||||||  |||| |||||||||||| || ||||     
T  14601991 atataaggatgaacttgcttcaccctcaaggtacacaacacttttcacaacacttcttacacactctctttc--agtttcattactgacttgagcgttgg 14602088  T
Q  700 agtgttaacgtgcctgcatacacctttcgttc 731  Q
    | || ||||||||||||| ||| |||||||||    
T  14602089 attgctaacgtgcctgcagacaactttcgttc 14602120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 663 - 812
Target Start/End: Complemental strand, 3982002 - 3981857
Alignment:
Q  663 cactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcg 762  Q
    |||||||| ||||||||||||  ||||| ||||||| |||| |||||||| ||||| ||||||||||||  ||||| |||||||||||  |||  || ||    
T  3982002 cactctttttcagttccatta--gacttgagtgttggagtgctaacgtgcatgcatgcacctttcgttc--caccgtgaagactcatcctcactgtaccg 3981907  T
Q  763 gagtacgttccgccactgttgcctctcaatcatcttcatcggacatatca 812  Q
    ||  |  ||||||||| |||||||||||  |||| ||||| |||||||||    
T  3981906 gaacattttccgccaccgttgcctctcatccatcctcatcagacatatca 3981857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 662 - 731
Target Start/End: Complemental strand, 13171134 - 13171065
Alignment:
Q  662 acactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttc 731  Q
    |||||||| |||||||||||||||||||| || |||| |||| |||||||||||||  ||||||||||||    
T  13171134 acactcttgctcagttccattactgacttgagagttggagtgctaacgtgcctgcaagcacctttcgttc 13171065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 660 - 717
Target Start/End: Original strand, 16012505 - 16012562
Alignment:
Q  660 acacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgca 717  Q
    ||||||||| ||||||||||||||||||||| || || | ||||||||||||||||||    
T  16012505 acacactctatctcagttccattactgacttgagcgtcggagtgttaacgtgcctgca 16012562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 595 - 643
Target Start/End: Original strand, 50151775 - 50151823
Alignment:
Q  595 cgccaatataagggtgactttgcttcaccctcaaggtataattcacttt 643  Q
    |||| |||||||||||||||||||||||||||||||||| ||| |||||    
T  50151775 cgcctatataagggtgactttgcttcaccctcaaggtatgatttacttt 50151823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 608 - 663
Target Start/End: Complemental strand, 19818800 - 19818745
Alignment:
Q  608 gtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacac 663  Q
    ||||||| | |||| | ||||||||||||||||||||| |||||||||||||||||    
T  19818800 gtgacttagtttcatcatcaaggtataattcacttttcacaacactttctacacac 19818745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 2e-42; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 406 - 747
Target Start/End: Original strand, 27083021 - 27083356
Alignment:
Q  406 aagaccaatcccatattgacacgtggactatacatacactgccttaaggctcaacgctcgaaggaacaagccaacatc-gtgcaccacatcgcttccagg 504  Q
    ||||||||||| || |||||||||||||||||| |||   |||||||||||||||||| |||||||||  ||||| || || ||| |  | |||| ||      
T  27083021 aagaccaatcctatgttgacacgtggactatacttacgtcgccttaaggctcaacgct-gaaggaacacaccaacttccgtacacaatgttgctttcaaa 27083119  T
Q  505 cacgcctctgcacgcggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatata 604  Q
    |||||||| ||||| ||||| | ||| |||||||||||||| | || ||||| | |||||||||||||  || || |||||  ||||  ||||| ||  |    
T  27083120 cacgcctccgcacgaggatcccgcta-acgtgtcctctaactgctctctaatcacacgccgcaaaacctggagacagttattctcacgcgcgcctatgca 27083218  T
Q  605 agggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgt 704  Q
    ||||||||||  ||||||||||||||||| ||||||||||| |||||||||||  |||||||||||| ||||| | |||||||||| ||||||| ||||     
T  27083219 agggtgacttaacttcaccctcaaggtatgattcacttttcacaacactttct--acacactctttcacagtttc-ttactgacttgagtgttggagtgc 27083315  T
Q  705 taacgtgcctgcatacacctttcgttccacaccgcgaagactc 747  Q
    ||||||| ||||| |||| ||||||||   |||||||||||||    
T  27083316 taacgtgtctgcagacacatttcgttc--taccgcgaagactc 27083356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 600 - 812
Target Start/End: Complemental strand, 22903208 - 22903000
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||| |||||||||||||||| ||||||||||| |||||||||||||  ||||||||||||||||||||||||||||| || |||||    
T  22903208 atataagggtgatattgtttcaccctcaaggtatgattcacttttcacaacactttctac--acactctttctcagttccattactgacttgagcgttga 22903111  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatcatcttc 799  Q
    |||| |||| ||||| |  | |||||||||||  ||||||||| ||||||||||||| ||  | || || ||||||||  |||||||||||  |||| ||    
T  22903110 agtgctaacatgcctacgaaaacctttcgttc--caccgcgaaaactcatcaccaccgtactgaagcactttccgccaacgttgcctctcatccatcctc 22903013  T
Q  800 atcggacatatca 812  Q
    |||||||| ||||    
T  22903012 atcggacagatca 22903000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 600 - 813
Target Start/End: Complemental strand, 8939026 - 8938816
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||| |||||||| ||||||||||||| |||| ||||||||||| || |||||| |||||||  ||||||||||||||| ||||||||  ||  |||     
T  8939026 atataacggtgacttagcttcaccctcaatgtatgattcacttttccca-cactttttacacac--tctttctcagttccaatactgactagagcattgg 8938930  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatcatcttc 799  Q
    ||||||||||||||||||| |||||||||||| ||  | | |||||||||| ||||| || | ||| || |||||||||  ||||||||||  |||| ||    
T  8938929 agtgttaacgtgcctgcatgcacctttcgttctaccgcacaaagactcatcgccaccgtaccagagcactttccgccaccattgcctctcatccatcctc 8938830  T
Q  800 atcggacatatcaa 813  Q
    |||| |||||||||    
T  8938829 atcgaacatatcaa 8938816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 423 - 749
Target Start/End: Complemental strand, 20025576 - 20025253
Alignment:
Q  423 gacacgtggactatacatacactgccttaaggctcaacgctcgaaggaacaagccaacatc-gtgcaccacatcgcttccaggcacgcctctgcacgcgg 521  Q
    |||||||||| || |||||||  |||||||||||| | | | ||||||||| | |||||   || ||||||||||  |||| ||| |||   || || ||    
T  20025576 gacacgtggattaaacatacatcgccttaaggctcgatgtttgaaggaacacgtcaacaaaagtacaccacatcgtatccaagcatgccctcgcgcgagg 20025477  T
Q  522 atcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgcttca 621  Q
    ||| |||||||| || ||| |||||  |||||||| | || || |||||||| || ||||||||  ||||  |||||  |||||||||||| | ||||||    
T  20025476 atcgctctacacatgacctataaccactccctaatcacacaccacaaaacccggagacggttattctcacgcgcgcctgtataagggtgacctagcttca 20025377  T
Q  622 ccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcataca 721  Q
    ||||||||| || ||||||||| | |||||||||||||  |||||||||||||||| |||| |||||   || |||| ||||||||||||  |||| |||    
T  20025376 ccctcaaggaatgattcactttacacaacactttctac--acactctttctcagtttcattcctgacagtagcgttggagtgttaacgtgtgtgcagaca 20025279  T
Q  722 cctttcgttccacaccgcgaagactcat 749  Q
    ||||||||  | ||||||||||||||||    
T  20025278 cctttcgt--cccaccgcgaagactcat 20025253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 529 - 726
Target Start/End: Original strand, 26994511 - 26994706
Alignment:
Q  529 tacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggtta-tcttcacatgcgccaatataagggtgactttgcttcaccctca 627  Q
    |||| ||||||||||| ||| ||||||| | |||||||||||| |  | ||||||| |||  ||  ||||| ||||||||||||| ||||||||||| ||    
T  26994511 tacatgtgtcctctaatcgt-ccctaatcacacgccgcaaaactcgaagacggttactctcaacgcgcgcctatataagggtgaccttgcttcaccccca 26994609  T
Q  628 aggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacaccttt 726  Q
    |||||| ||||||||||| |||||| ||||  | ||||||||||||| ||||||||||||||| || || | |||| ||||||| ||| | ||||||||    
T  26994610 aggtatgattcacttttcacaacaccttct--aaacactctttctcaattccattactgacttgagcgtcggagtgctaacgtgtctgaagacaccttt 26994706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 595 - 734
Target Start/End: Complemental strand, 22865881 - 22865744
Alignment:
Q  595 cgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagt 694  Q
    |||| ||||||||||||  ||||||||||||||||||| |  ||||||||| ||||| |||||  ||||||| |||||||||||||||||| |||| ||     
T  22865881 cgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaaca-tttctt-acacactttttctcagttccattactaacttgagc 22865784  T
Q  695 gttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||  ||||| |||||| ||||||| |||||||||||||||    
T  22865783 gtcaaagtgctaacgtacctgcatgcacctttcgttccac 22865744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 594 - 747
Target Start/End: Complemental strand, 25537526 - 25537377
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||||||||  || ||||||||||||||||||  ||||||||| ||||||||   | ||||| |||||||||||||||||||   ||| ||    
T  25537526 gcgcctatataagggtgaactttcttcaccctcaaggtatacatcacttttcacaacactt--catacacaatctttctcagttccattacaatcttgag 25537429  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactc 747  Q
     |||| |||| |||||||| ||||  ||||||||||||  ||||||||||||||    
T  25537428 cgttggagtgctaacgtgcttgcaggcacctttcgttc--caccgcgaagactc 25537377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 661 - 750
Target Start/End: Complemental strand, 16621264 - 16621177
Alignment:
Q  661 cacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
    |||||||||||||||||||| || || ||| || |||||||||||||||||||| ||||||||||||||||  ||||| |||||||||||    
T  16621264 cacactctttctcagttccaatattggcttgagcgttgaagtgttaacgtgcctacatacacctttcgttc--caccgtgaagactcatc 16621177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 594 - 733
Target Start/End: Complemental strand, 24647409 - 24647272
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||||||||  |||||||||||| ||||||||  ||||||||| ||||||||  |  ||||||||||| |||||||||||||||| || ||    
T  24647409 gcgcctatataagggtgaacttgcttcacccttaaggtatacatcacttttcacaacacttctt--acacactctttttcagttccattactgaattgag 24647312  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttcca 733  Q
     |||| |||||||| |||  || || |||| |||||||||    
T  24647311 cgttggagtgttaaagtgtatgtatgcacccttcgttcca 24647272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 520 - 733
Target Start/End: Original strand, 32418382 - 32418593
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttat-cttcacatgcgccaatataagggtgactttgct 618  Q
    ||||||| |||||||||||| |||||| | ||||||| | |||||||| ||||| || || ||||  ||| ||   || | ||| ||||||||  |||||    
T  32418382 ggatcaccctacacgtgtcccctaaccat-ccctaatcacacgccgcataacccggagacagttaagcttaacgcacgtctatacaagggtgaacttgct 32418480  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcat 718  Q
    ||| ||||||||||| ||||||| ||| ||||||| |||  |||||||||||||| ||||||| | |||||| || ||   |||||| |||||||||||     
T  32418481 tcatcctcaaggtatgattcactcttcacaacactctct--acacactctttctctgttccatcagtgacttgagcgtcagagtgttgacgtgcctgcag 32418578  T
Q  719 acacctttcgttcca 733  Q
     | ||||||||||||    
T  32418579 gctcctttcgttcca 32418593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 603 - 661
Target Start/End: Complemental strand, 34493625 - 34493567
Alignment:
Q  603 taagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacac 661  Q
    |||||||||||| | |||||||||||||||| ||||||||||| |||||||||||||||    
T  34493625 taagggtgacttagtttcaccctcaaggtatgattcacttttcacaacactttctacac 34493567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 485 - 632
Target Start/End: Complemental strand, 26163848 - 26163700
Alignment:
Q  485 tgcaccacatcgcttccaggcacgcctctgcacgcggatcactctacacgtgtcctct-aaccgttccctaattatacgccgcaaaacccagaaacggtt 583  Q
    |||||||||||||  ||| |||| ||||  | || ||||||||||||||||||||||| || || ||||| || |||||||||||||||  || |  |||    
T  26163848 tgcaccacatcgcacccaagcacacctccacgcgaggatcactctacacgtgtcctctaaatcgctccctgatcatacgccgcaaaacctggataaagtt 26163749  T
Q  584 atcttcacatgcgccaatataagggtgactttgcttcaccctcaaggta 632  Q
    ||||| |    |||| |||||||||||| || |||||||| ||||||||    
T  26163748 atctttatgaacgcctatataagggtgaattagcttcaccttcaaggta 26163700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 674 - 734
Target Start/End: Original strand, 26348127 - 26348187
Alignment:
Q  674 agttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||||||||| |||||| || |||| |||| ||||||||||||| ||||||||||||||||    
T  26348127 agttccattaatgacttgagcgttggagtgctaacgtgcctgcagacacctttcgttccac 26348187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 600 - 690
Target Start/End: Complemental strand, 25333850 - 25333762
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    ||||||| ||||  ||||||||| ||||| |||| ||||||||||  |||||||||||||  ||||||| ||| |||| ||||||||||||    
T  25333850 atataagagtgaacttgcttcactctcaaagtatgattcacttttaacaacactttctac--acactctctcttagttacattactgactt 25333762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 733
Target Start/End: Complemental strand, 19846125 - 19846053
Alignment:
Q  661 cacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttcca 733  Q
    |||||||||||| ||||||| ||||||||| ||||||  |||| ||| ||| |||||  ||||||||||||||    
T  19846125 cacactctttcttagttccaatactgacttgagtgttagagtgctaatgtgtctgcaggcacctttcgttcca 19846053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 661 - 733
Target Start/End: Complemental strand, 26163691 - 26163619
Alignment:
Q  661 cacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttcca 733  Q
    |||||||||||| |||| |||| ||||||| || |||| |||| ||| |||| ||||| ||||||||||||||    
T  26163691 cacactctttcttagtttcatttctgacttgagcgttggagtgctaatgtgcatgcatgcacctttcgttcca 26163619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 590 - 632
Target Start/End: Original strand, 26348057 - 26348099
Alignment:
Q  590 acatgcgccaatataagggtgactttgcttcaccctcaaggta 632  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  26348057 acatgcgcctatataagggtgaacttgcttcaccctcaaggta 26348099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 8e-42; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 595 - 812
Target Start/End: Complemental strand, 30477761 - 30477548
Alignment:
Q  595 cgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagt 694  Q
    |||| ||||||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||  |||||||||||||||| | |||||||||| ||     
T  30477761 cgcctatataagggtgacattacttcaccctcaaggtatgattcacttttcacaacactttctac--acactctttctcagtttcgttactgacttgagc 30477664  T
Q  695 gttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatca 794  Q
    |||| |||| |||||||| |||| ||| |||||||  | |||||||||| |||||  ||||||||  |||| || |||||||||||||||||||||  ||    
T  30477663 gttggagtgctaacgtgcatgcagacatctttcgt--ctcaccgcgaagtctcattgccaccatactggagcactttccgccactgttgcctctcatcca 30477566  T
Q  795 tcttcatcggacatatca 812  Q
    || ||| |||||| ||||    
T  30477565 tcatcaccggacaaatca 30477548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 537 - 790
Target Start/End: Complemental strand, 13754936 - 13754687
Alignment:
Q  537 tcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgcttcaccctcaaggtataat 636  Q
    |||||||||||||| ||||| | ||||||||||| ||  | ||||||||  |||   | ||| ||||||| ||||||| |||||||||||||||||  ||    
T  13754936 tcctctaaccgttcactaatcacacgccgcaaaatccgaagacggttattctcatgcgtgcctatataagagtgacttagcttcaccctcaaggtaggat 13754837  T
Q  637 tcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacac 736  Q
    ||||||| | |||||||||||||  |||||||||||||||| |||||||||||| || | || |||||||||||||| |||  ||||||||||  | ||     
T  13754836 tcactttacacaacactttctac--acactctttctcagtttcattactgacttgagcgatgtagtgttaacgtgccagcaggcacctttcgt--cccat 13754741  T
Q  737 cgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctca 790  Q
     |||||||||| |||||||| ||||| |  || || ||||| ||||||||||||    
T  13754740 tgcgaagactcttcaccaccgtatcgcatcacatttcgccattgttgcctctca 13754687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 529 - 759
Target Start/End: Complemental strand, 13765175 - 13764949
Alignment:
Q  529 tacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgcttcaccctcaa 628  Q
    ||||||||| |||| |||||||| |||| | |  ||||||||| |  | ||||||||  ||||  ||||  || |||||||||||| |||||||| ||||    
T  13765175 tacacgtgttctcttaccgttccttaatcacagaccgcaaaactcgaagacggttattctcacgcgcgcttatttaagggtgacttagcttcaccttcaa 13765076  T
Q  629 ggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcg 728  Q
    |  || ||||||||| | |||||||||||||||||  |||||||||||| ||||||| |||| |   ||| ||| |||||||||||||| ||||||||||    
T  13765075 gacattattcactttacacaacactttctacacac--tctttctcagtttcattactcacttgaacattggagtcttaacgtgcctgcagacacctttcg 13764978  T
Q  729 ttccacaccgcgaagactcatcaccaccata 759  Q
    |  |||||||||||||||| |||||||||||    
T  13764977 t--cacaccgcgaagactcttcaccaccata 13764949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 600 - 753
Target Start/End: Complemental strand, 18323058 - 18322909
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||| |||||||| |||||| |||| ||||||||||| ||||| ||||||||||   ||||||||||||| ||||||||||| || ||||     
T  18323058 atataagggtgaccttgcttcatcctcaatgtatgattcacttttcacaacattttctacacaa--tctttctcagttctattactgacttgagcgttgg 18322961  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcacc 753  Q
    ||||||||| || |||||| ||||||| ||||  |||||||||||||| |||||    
T  18322960 agtgttaacatgtctgcatgcaccttttgttc--caccgcgaagactcgtcacc 18322909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 520 - 710
Target Start/End: Original strand, 6927990 - 6928174
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaatataagggtgactttgct 618  Q
    ||||||||||||||||||||||| |||||||| |||| | |||| ||||||||  || ||||||||  ||| |   ||||    |||||||||  ||  |    
T  6927990 ggatcactctacacgtgtcctcttaccgttcc-taatcacacgctgcaaaacctggagacggttattctcaacgcacgcc----taagggtgaaattaat 6928084  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgt 710  Q
    ||||||||||||||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||||||||| || ||||||    
T  6928085 tcaccctcaaggtatgattcacttttcacaacactttctacac--actctttctcagttccattactgacttgagtgttgaaatgctaacgt 6928174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 594 - 728
Target Start/End: Original strand, 17698255 - 17698387
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||| ||||| | ||||||||||||||| |||||||||||||||| |||||||||||  |||||||||||||| ||||||||||||||||       
T  17698255 gcgcctatatatgggtggccttgcttcaccctcaaagtataattcacttttcacaacactttct--acacactctttctcggttccattactgacttgca 17698352  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcg 728  Q
    ||||| | || |||||| || ||| ||||||||||    
T  17698353 tgttggaatgctaacgtacccgcagacacctttcg 17698387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 601 - 734
Target Start/End: Original strand, 17927681 - 17927812
Alignment:
Q  601 tataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaa 700  Q
    |||||||||| | |||||||||||| ||||||| |||||| ||||  ||||||||||||| ||  ||  |||||||||||||||||||||||| |||| |    
T  17927681 tataagggtggcattgcttcacccttaaggtatgattcacctttcataacactttctacatac--tcaatctcagttccattactgacttaagcgttgga 17927778  T
Q  701 gtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||| |||||||| ||||| |||||||||| ||||    
T  17927779 gtgctaacgtgcatgcatgcacctttcgtcccac 17927812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 520 - 655
Target Start/End: Original strand, 23497060 - 23497194
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgctt 619  Q
    ||||||| || || |||||||||||||| |||||||| | |||  ||||||||| || ||  ||||||||||  ||||| ||||||||||||||||||||    
T  23497060 ggatcaccctgcatgtgtcctctaaccgctccctaatcacacgt-gcaaaacccggagacaattatcttcacgagcgcctatataagggtgactttgctt 23497158  T
Q  620 caccctcaaggtataattcacttttcgcaacacttt 655  Q
     ||||||||||||| ||||||| ||| |||||||||    
T  23497159 aaccctcaaggtatgattcactattcacaacacttt 23497194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 660 - 756
Target Start/End: Complemental strand, 23269303 - 23269209
Alignment:
Q  660 acacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccacc 756  Q
    ||||||||||| ||||||||||||||||||||||||||| |||| |||| |||||| | |||||||||||||  |||||| |||||||||| |||||    
T  23269303 acacactctttatcagttccattactgacttaagtgttggagtgctaacttgcctgtagacacctttcgttc--caccgcaaagactcatcgccacc 23269209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 594 - 733
Target Start/End: Original strand, 26916868 - 26917005
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||||| ||| ||||||||  |||||||||| | ||||||||| |||||||||||  ||||||||| ||||||||||||||||||||| ||    
T  26916868 gcgcctatataagggcgacattgcttcatgctcaaggtatgactcacttttcacaacactttct--acacactctctctcagttccattactgacttgag 26916965  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttcca 733  Q
     |||   | | ||||||||||  || ||||||||||||||    
T  26916966 cgttagtgcgctaacgtgcctaaatgcacctttcgttcca 26917005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 594 - 760
Target Start/End: Original strand, 3459454 - 3459615
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgc-aacactttctacacacactctttctcagttccattactgacttaa 692  Q
    ||||| ||||||||||||  |||||||||| ||||||||  ||| ||||||| | ||||||||||||||||  |||| |||||||||||||||||||| |    
T  3459454 gcgcctatataagggtgaacttgcttcacc-tcaaggtacgatttacttttcaccaacactttctacacac--tcttgctcagttccattactgacttga 3459550  T
Q  693 gtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatat 760  Q
    | |  | |||| |||||||||||||  |||||||||   | |||||||||||||||| ||| ||||||    
T  3459551 gcgccggagtgctaacgtgcctgcaggcacctttcg---cccaccgcgaagactcattaccgccatat 3459615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 617 - 734
Target Start/End: Complemental strand, 24507555 - 24507440
Alignment:
Q  617 cttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgc 716  Q
    ||||||||||||||||| ||||||||||| |||||||||||  | ||||||||||||| |||||||| |||||| |  |||| |||  |||||||| |||    
T  24507555 cttcaccctcaaggtatgattcacttttcacaacactttct--agacactctttctcatttccattattgacttgatcgttggagtactaacgtgcatgc 24507458  T
Q  717 atacacctttcgttccac 734  Q
    | |||||||||| |||||    
T  24507457 agacacctttcgctccac 24507440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 659 - 734
Target Start/End: Original strand, 1909741 - 1909816
Alignment:
Q  659 cacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||||||||||||||||| |||||||||||| || |||||| || ||||||| |||||| |||||||||||||||    
T  1909741 cacacactctttctcagtttcattactgactttagcgttgaaatgctaacgtgtctgcatgcacctttcgttccac 1909816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 520 - 717
Target Start/End: Complemental strand, 5860010 - 5859815
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaatataagggtgactttgct 618  Q
    ||||||||||||||||||| | ||||||| ||||||| |  |||||||||| |||||  ||||||| | || |  ||||| ||||||||||||| |||||    
T  5860010 ggatcactctacacgtgtcatttaaccgt-ccctaatcactcgccgcaaaatccagaggcggttatttccaacgcgcgcctatataagggtgaccttgct 5859912  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgca 717  Q
    |||  |||||||||  |||||||| ||  |||||  |||  ||||||| ||||| |||||||||| |||||| || |||| |||| ||||||| |||||    
T  5859911 tcaatctcaaggtacgattcacttctcaaaacac--tctcaacacactatttcttagttccattattgacttgagcgttggagtgctaacgtgtctgca 5859815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 600 - 734
Target Start/End: Complemental strand, 15058150 - 15058018
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||| ||||| ||| |||||||||||||||| ||| | ||||| | ||||||||||||||   | ||||||| || ||||||| ||||  | ||||     
T  15058150 atataagtgtgacgttgtttcaccctcaaggtatgatttatttttcaccacactttctacacat--tttttctcaatttcattactaacttgtgcgttgt 15058053  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| |||||||||||||| |||||||||||||||    
T  15058052 agtgctaacgtgcctgcatgcacctttcgttccac 15058018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 604 - 725
Target Start/End: Complemental strand, 21416849 - 21416730
Alignment:
Q  604 aagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtg 703  Q
    ||||||||  |||||||||||| ||||||  ||||| ||||| |||||||||||||  |||||||||||||||| |||||||||||| || || | ||||    
T  21416849 aagggtgaacttgcttcacccttaaggtacgattcatttttcacaacactttctac--acactctttctcagtttcattactgacttgagcgtcggagtg 21416752  T
Q  704 ttaacgtgcctgcatacacctt 725  Q
     ||||| || |||| |||||||    
T  21416751 ctaacgagcatgcagacacctt 21416730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 704
Target Start/End: Complemental strand, 24070945 - 24070865
Alignment:
Q  623 cctcaaggt-ataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgt 704  Q
    ||||||||| || |||||||| || |||||||||||||||||  ||||||| ||||||||||||||||||||||||| |||||    
T  24070945 cctcaaggttatgattcacttctcacaacactttctacacac--tctttcttagttccattactgacttaagtgttggagtgt 24070865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 734
Target Start/End: Original strand, 24576559 - 24576691
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  || |||||||||||||||| |  | ||||||| ||||||||  |||||||  || || | ||||||||||||||||| || ||       
T  24576559 atataagggtgaacttccttcaccctcaaggtacacattacttttcacaacacttcttacacac--tcatttttagttccattactgacttgagcgtcag 24576656  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||||||||||||||||  |||||||||||||||    
T  24576657 agtgttaacgtgcctgcaggcacctttcgttccac 24576691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 539 - 643
Target Start/End: Complemental strand, 23269411 - 23269306
Alignment:
Q  539 ctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaatataagggtgactttgcttcaccctcaaggtataatt 637  Q
    |||| |||| |||||| | | |||| ||||||| | || ||||||||| ||| || ||||| ||||| ||||||| |||||||||||||||||||  |||    
T  23269411 ctctgaccgctccctattcacacgctgcaaaactcggagacggttatcctcaacacgcgcctatatatgggtgacattgcttcaccctcaaggtacgatt 23269312  T
Q  638 cacttt 643  Q
    ||||||    
T  23269311 cacttt 23269306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 592 - 657
Target Start/End: Original strand, 17319600 - 17319665
Alignment:
Q  592 atgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttct 657  Q
    ||||||| |||||| |||||  ||||||||||||| ||| || ||||||||||| |||| ||||||    
T  17319600 atgcgcctatataaaggtgaacttgcttcaccctcgaggcatgattcacttttcacaactctttct 17319665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 1e-34; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 600 - 734
Target Start/End: Original strand, 9801060 - 9801191
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||  |||||||||||||| |||| ||||||||||| |||||||     
T  9801060 atataagggtgacattgcttcaccctcaaggtatgattcacttttcacaacactttct--acacactctttctctgttctattactgacttgagtgttg- 9801156  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| |||||||| ||||  |||||||||||||||    
T  9801157 agtgctaacgtgcttgcaggcacctttcgttccac 9801191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 600 - 734
Target Start/End: Original strand, 21342263 - 21342395
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||||||| || || |||||||||||| |||| ||||||||||| |||||||||||| ||||  ||||| ||||||||||||||||||| || ||||     
T  21342263 atataagggtaaccttacttcaccctcaatgtatgattcacttttcacaacactttctatacac--tctttatcagttccattactgacttgagcgttgt 21342360  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    | |||||||||||||||||| ||||||||| ||||    
T  21342361 actgttaacgtgcctgcatatacctttcgtcccac 21342395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 602 - 813
Target Start/End: Original strand, 2311812 - 2312019
Alignment:
Q  602 ataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaag 701  Q
    ||||||||||| |||||||||||||||||||| |||||| |||| |||||||||||  ||||| |||||||||  ||| || |||| || || |||| ||    
T  2311812 ataagggtgacattgcttcaccctcaaggtatgattcacctttcacaacactttct--acacattctttctcaaatcccttgctgatttgagcgttggag 2311909  T
Q  702 tgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatcatcttcat 801  Q
    || ||||||  ||||| ||||||||| |||  |||| ||||||||| || ||||| || ||||| || || ||||||||||||||||||  |||  |||     
T  2311910 tgctaacgtatctgcagacacctttcattc--caccacgaagactcttcgccaccgtaccggagcactttgcgccactgttgcctctcatccatactcac 2312007  T
Q  802 cggacatatcaa 813  Q
    ||||||||||||    
T  2312008 cggacatatcaa 2312019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 534 - 690
Target Start/End: Complemental strand, 30607109 - 30606955
Alignment:
Q  534 gtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttat-cttcacatgcgccaatataagggtgactttgcttcaccctcaaggta 632  Q
    ||||||||||||||| ||||||| | |||| || |||||| || || ||||| ||| ||  ||||| ||||||||||| | || ||||||||||||||||    
T  30607109 gtgtcctctaaccgt-ccctaatcacacgcggcgaaacccggagacagttattcttaacgcgcgcctatataagggtggccttacttcaccctcaaggta 30607011  T
Q  633 taattcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    ||||||||||||| |||||||||||  || |||||||||||| |||||||||||||||    
T  30607010 taattcacttttcacaacactttct--actcactctttctcaattccattactgactt 30606955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 600 - 714
Target Start/End: Original strand, 17143725 - 17143837
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||| ||||||| |||||||| ||||||||||| |||||||||||  ||||||||||||||||||||||||||||||| || || |     
T  17143725 atataagggtgatgttgtttcacccccaaggtatgattcacttttcacaacactttct--acacactctttctcagttccattactgacttgagcgtcgg 17143822  T
Q  700 agtgttaacgtgcct 714  Q
    |||| ||||||||||    
T  17143823 agtgctaacgtgcct 17143837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 594 - 754
Target Start/End: Original strand, 431286 - 431442
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| |||||||||||    |||||||||||||||| | |||||||||||| || |||||||  ||| ||||||||||||||||||||| |||||| ||    
T  431286 gcgcctatataagggtggacatgcttcaccctcaagggacaattcacttttcacagcactttc--cacgcactctttctcagttccattattgacttgag 431383  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcacca 754  Q
     || |||||| ||||||| ||| |  |||||||| |||  ||||||||||||||| |||||    
T  431384 cgtcgaagtgctaacgtgtctgtaggcacctttctttc--caccgcgaagactcaacacca 431442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 601 - 805
Target Start/End: Original strand, 28715465 - 28715660
Alignment:
Q  601 tataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaa 700  Q
    |||||||||||  ||| |||||||||||||||| ||||||||||| ||||||||  || |||||||||||||||||||||||||||||     ||||| |    
T  28715465 tataagggtgatattgtttcaccctcaaggtatgattcacttttcacaacactt--tatacacactctttctcagttccattactgac-----tgttgga 28715557  T
Q  701 gtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctcaatcatcttca 800  Q
    ||| |||||||| |||  ||| ||||| ||   ||||  ||||||||||  |||| ||| ||||  || |||||||||| ||||||||||  |||| |||    
T  28715558 gtgctaacgtgcatgcggacaactttcatt--tcaccttgaagactcattgccacaataccggaacactttccgccacttttgcctctcatccatcctca 28715655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 594 - 690
Target Start/End: Complemental strand, 16704523 - 16704429
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    ||||| ||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||  |||| ||||||||||  ||||||||||||||    
T  16704523 gcgcctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttct--acactctctttctcaactccattactgactt 16704429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 602 - 727
Target Start/End: Original strand, 8122893 - 8123015
Alignment:
Q  602 ataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaag 701  Q
    ||||||||||| |||||||||||||||||||| ||||||||||| |||| ||||| ||| |     ||| ||| || |||||||||||| || |||| ||    
T  8122893 ataagggtgacattgcttcaccctcaaggtatgattcacttttcacaacgctttcgacata---gttttttcaatttcattactgacttgagcgttggag 8122989  T
Q  702 tgttaacgtgcctgcatacacctttc 727  Q
    || |||||||||||||||||||||||    
T  8122990 tgctaacgtgcctgcatacacctttc 8123015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 600 - 730
Target Start/End: Complemental strand, 20622523 - 20622393
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||| || |||||| |  ||||||| ||||||  |  |||||||||||| || ||  |    
T  20622523 atataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaccactttatctacacactatttctctatctcattactgacttgagcgtcaa 20622424  T
Q  700 agtgttaacgtgcctgcatacacctttcgtt 730  Q
    ||||||||| ||||||||   ||||||||||    
T  20622423 agtgttaacatgcctgcaggaacctttcgtt 20622393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 404 - 512
Target Start/End: Original strand, 13084839 - 13084947
Alignment:
Q  404 agaagaccaatcccatattgacacgtggactatacatacactgccttaaggctcaacgctcgaaggaacaagccaacat-cgtgcaccacatcgcttcca 502  Q
    ||||||| |||||| || |||||||| |||||| ||||||||| ||||||||||||||| ||||| |||| ||||||||  ||||||||| |||| ||||    
T  13084839 agaagactaatcccgtactgacacgttgactattcatacactgtcttaaggctcaacgc-cgaagaaacacgccaacatatgtgcaccacgtcgcatcca 13084937  T
Q  503 ggcacgcctc 512  Q
     |||||||||    
T  13084938 agcacgcctc 13084947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 730
Target Start/End: Complemental strand, 12516300 - 12516172
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||| |||||  ||||||||||||||||||| |  ||||||||| ||||||||  ||||||   |||||||||||||||||||| |||| || || |     
T  12516300 atataaaggtgaacttgcttcaccctcaaggtacatatcacttttcacaacacttattacacaa--tctttctcagttccattactaacttgagcgtcgg 12516203  T
Q  700 agtgttaacgtgcctgcatacacctttcgtt 730  Q
    |||| ||||||| |||||  |||||||||||    
T  12516202 agtgctaacgtgtctgcaggcacctttcgtt 12516172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 594 - 758
Target Start/End: Original strand, 14860069 - 14860229
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||||||||  ||||||||||||||||||| |  ||||||||| ||||||||  |  ||| ||| |||||||||||||||||||| || ||    
T  14860069 gcgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttctt--acaaactgtttctcagttccattactgagttgag 14860166  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccat 758  Q
      |   |||| ||| |||||||||  ||||||||||||  |||| |||||| ||||| |||||||    
T  14860167 aatcagagtgctaatgtgcctgcaagcacctttcgttc--caccacgaagattcatcgccaccat 14860229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 608 - 748
Target Start/End: Original strand, 17485608 - 17485744
Alignment:
Q  608 gtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaa 707  Q
    |||| ||||||||||||||||||||  ||||| ||| | ||||| | |||||||||  || |||||| ||||||||||||||| || ||||  ||| |||    
T  17485608 gtgattttgcttcaccctcaaggtactattcattttacacaacattctctacacac--tccttctcaattccattactgacttgagcgttggggtgctaa 17485705  T
Q  708 cgtgcctgcatacacctttcgttccacaccgcgaagactca 748  Q
     |||||  || |||||||||||||  |||||||||||||||    
T  17485706 tgtgcccacagacacctttcgttc--caccgcgaagactca 17485744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 520 - 790
Target Start/End: Original strand, 28723669 - 28723936
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacat-gcgccaatataagggtgactttgct 618  Q
    ||||||| ||||| ||||||||||| || ||||| || | |||  |||||| ||||| || |||||  ||| |  ||||| |||||||| |||| ||| |    
T  28723669 ggatcaccctacatgtgtcctctaatcgctccctgatcacacgttgcaaaatccagagacagttattctcaaagcgcgcctatataaggatgacattgtt 28723768  T
Q  619 tcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcat 718  Q
    |||||||| || ||  ||||||||||| ||||| |||||  ||||||||||||| |||||||||| |||||| || |||| | ||  |||||||||        
T  28723769 tcaccctccagatacgattcacttttcacaacattttct--acacactctttcttagttccattagtgacttgagcgttggattgccaacgtgcctatta 28723866  T
Q  719 acacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctca 790  Q
     ||| ||||||||  ||||||||||||||||  ||||| || ||||  || || || ||||||| |||||||    
T  28723867 gcacatttcgttc--caccgcgaagactcattgccaccgtaccggaacacttttcgtcactgttacctctca 28723936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 660 - 756
Target Start/End: Complemental strand, 21649470 - 21649376
Alignment:
Q  660 acacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccacc 756  Q
    ||||| ||| ||||||||||||||||||||| |  ||||  ||| |||||||| ||||  ||||||||||||  ||||||||||||||||| |||||    
T  21649470 acacattctctctcagttccattactgacttgatcgttggggtgctaacgtgcttgcaggcacctttcgttc--caccgcgaagactcatcgccacc 21649376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 637 - 734
Target Start/End: Complemental strand, 1770903 - 1770808
Alignment:
Q  637 tcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||||||| |||||||||||||||||  |||| ||||||||||||||| |||| || || | |||  |||| ||| |||| ||||||||| ||||||    
T  1770903 tcacttttcacaacactttctacacac--tcttcctcagttccattactaacttgagcgtcggagtactaacatgcttgcagacacctttccttccac 1770808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 600 - 688
Target Start/End: Original strand, 12731537 - 12731623
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgac 688  Q
    ||||||||||||  ||||||||||||||||||  |  ||||||||| ||||||||  |  | |||||||||||||||||||||| ||||    
T  12731537 atataagggtgaacttgcttcaccctcaaggttcacatcacttttcacaacacttctt--atacactctttctcagttccattaatgac 12731623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 740 - 784
Target Start/End: Original strand, 29644481 - 29644525
Alignment:
Q  740 gaagactcatcaccaccatatcggagtacgttccgccactgttgc 784  Q
    ||||||||| |||||||||||||||| || |||||||||||||||    
T  29644481 gaagactcaacaccaccatatcggagcaccttccgccactgttgc 29644525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 672 - 727
Target Start/End: Original strand, 6109699 - 6109754
Alignment:
Q  672 tcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttc 727  Q
    ||||||| ||||||||||||||||||| |||| |||||||||| ||  ||||||||    
T  6109699 tcagttcgattactgacttaagtgttggagtgctaacgtgcctacaagcacctttc 6109754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 734
Target Start/End: Complemental strand, 12108475 - 12108402
Alignment:
Q  661 cacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| |||||||||||||||||||| |||| || || | |||| |||| ||| ||||| |||||||| ||||||    
T  12108475 cacattctttctcagttccattactaacttgagcgtcggagtggtaacatgcatgcatgcacctttcattccac 12108402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 690
Target Start/End: Complemental strand, 25496103 - 25495965
Alignment:
Q  551 cctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaa 649  Q
    |||||| | |||||||| ||||| || ||||||||  ||| | |||||| ||||||||||||  |||||||||| | |||||| |  ||||||||  |||    
T  25496103 cctaatcacacgccgcataacccggagacggttatgatcaacgtgcgcctatataagggtgaacttgcttcacctttaaggtacacatcacttttttcaa 25496004  T
Q  650 cactttctacacacactctttctcagttccattactgactt 690  Q
    | |||  |  ||||||||||||||||||  |||||||||||    
T  25496003 ctcttctt--acacactctttctcagtttgattactgactt 25495965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 600 - 717
Target Start/End: Original strand, 95786 - 95901
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||| |||||||||||| ||||||| ||||||||||| |||||||||||  || ||||||||||||||||||||||| |||| || |||||    
T  95786 atataagggtgacgttgcttcaccctgaaggtatgattcacttttcacaacactttct--acgcactctttctcagttccattactaacttgagcgttga 95883  T
Q  700 agtgttaacgtgcctgca 717  Q
    |||| |||||||||||||    
T  95884 agtggtaacgtgcctgca 95901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 571
Target Start/End: Original strand, 95706 - 95756
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaac 571  Q
    ||||||||||||| |||||||||||||| |||||||| | ||||||||||||    
T  95706 ggatcactctacatgtgtcctctaaccg-tccctaatcacacgccgcaaaac 95756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 590 - 750
Target Start/End: Complemental strand, 379841 - 379685
Alignment:
Q  590 acatgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgact 689  Q
    ||||||||| ||||| ||||||  ||||||||||||||||||| |  ||||||||| ||||||||  |||||||  ||||||||||||||||||||||||    
T  379841 acatgcgcctatatacgggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacac--tctttctcagttccattactgact 379744  T
Q  690 taagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
    | |||||  ||||| ||||||||||  || ||||||||||||  |||||||||||||||||    
T  379743 tcagtgtcaaagtgctaacgtgcctagatgcacctttcgttc--caccgcgaagactcatc 379685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 594 - 693
Target Start/End: Original strand, 120981 - 121078
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| |||||||||||| |||||||||||||||||||| |  ||||||||| ||||||||  || ||||||||||||||||||||||||||||||||||    
T  120981 gcgcctatataagggtgaatttgcttcaccctcaaggtacacatcacttttcacaacactt--tatacacactctttctcagttccattactgacttaag 121078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 2e-30; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 504 - 734
Target Start/End: Original strand, 26762791 - 26763019
Alignment:
Q  504 gcacgcctctgcacgcggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaata 602  Q
    ||||||| |||| || |||||||  |||| ||||||||||||||| ||||||| | ||||| |||||||| ||   |||||||  || || ||||| |||    
T  26762791 gcacgcccctgcgcgaggatcaccatacaagtgtcctctaaccgt-ccctaatcacacgccccaaaacccggaggtggttatcaacaacacgcgcctata 26762889  T
Q  603 taagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagt 702  Q
    || ||||| | |||||||||||||||||||| ||||||||||| |||||||||||  ||||||| ||| | |||||| |||||||||| || |||| |||    
T  26762890 tatgggtgtccttgcttcaccctcaaggtatgattcacttttcacaacactttct--acacactatttatgagttcctttactgacttgagcgttggagt 26762987  T
Q  703 gttaacgtgcctgcatacacctttcgttccac 734  Q
    | |||||||||||||   |||||||| |||||    
T  26762988 gctaacgtgcctgcaagaacctttcgctccac 26763019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 600 - 734
Target Start/End: Original strand, 9135337 - 9135469
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||||||||| ||||||||||||||||||||| ||||||||||| ||||| ||| |  ||||||||||||||| ||||||||||||||| || |||      
T  9135337 atataagggtgaatttgcttcaccctcaaggtatgattcacttttcacaacagttttt--acacactctttctcaattccattactgacttgagcgttag 9135434  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| ||||||||||  || |||||||||||||||    
T  9135435 agtgctaacgtgcctatatgcacctttcgttccac 9135469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 514 - 717
Target Start/End: Complemental strand, 5863388 - 5863187
Alignment:
Q  514 gcacgcggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttca-catgcgccaatataagggtgac 612  Q
    ||||| |||||||  |||||||||||||||||||| ||||||| | | ||||  |||||| ||  ||||||| | || |  ||||| ||| |||||||||    
T  5863388 gcacgaggatcacgttacacgtgtcctctaaccgt-ccctaatcacatgccgtgaaacccggaggcggttatttccaacgcgcgcctatacaagggtgac 5863290  T
Q  613 tttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgc 712  Q
     ||||| |||||||||||||| ||||||||||  ||||| |||||||  ||||||||||||||||| ||||||||||| || |||  |||| ||||||||    
T  5863289 attgctccaccctcaaggtatgattcactttttacaacattttctac--acactctttctcagttcgattactgacttgagcgtttgagtgctaacgtgc 5863192  T
Q  713 ctgca 717  Q
     ||||    
T  5863191 ttgca 5863187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 604 - 750
Target Start/End: Complemental strand, 12644897 - 12644754
Alignment:
Q  604 aagggtgactttgcttcaccctcaaggtataattcacttttcgc-aacactttctacacacactctttctcagttccattactgacttaagtgttgaagt 702  Q
    ||||||||  ||||||||||||||| ||| |||||||||||| | |||||||||  |||||||| ||||||||||||||||||||| | || || | |||    
T  12644897 aagggtgaacttgcttcaccctcaacgtacaattcacttttcaccaacactttc--cacacactttttctcagttccattactgacctgagcgtcggagt 12644800  T
Q  703 gttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
    | |||| ||||||||| ||||||||||||  ||||| |||||||||||    
T  12644799 gctaacttgcctgcatgcacctttcgttc--caccgtgaagactcatc 12644754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 600 - 734
Target Start/End: Complemental strand, 39879503 - 39879370
Alignment:
Q  600 atataagggtgactttgcttcaccc-tcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttg 698  Q
    ||||||||||||| ||||||| ||| ||| || || ||||||||||  ||||||||| |||||||  |||||||||||| |||||||||||| || |||     
T  39879503 atataagggtgacattgcttcccccctcatggcatgattcactttttacaacactttttacacac--tctttctcagtttcattactgacttgagcgtta 39879406  T
Q  699 aagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||||||||||| |||||  |||||||||||||||    
T  39879405 aagtgttaacgtgtctgcaggcacctttcgttccac 39879370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 601 - 734
Target Start/End: Complemental strand, 7486659 - 7486528
Alignment:
Q  601 tataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaa 700  Q
    |||||||||||  || ||||||| | |||| || ||||||||||| |||||| |||||||||   |||||||||||||||||||||| || || |||| |    
T  7486659 tataagggtgaactttcttcacctttaagggatgattcacttttcacaacaccttctacacaa--tctttctcagttccattactgaattgagcgttgga 7486562  T
Q  701 gtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||| |||||||||||||| |||||||| ||||||    
T  7486561 gtgctaacgtgcctgcatgcacctttcattccac 7486528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 630 - 750
Target Start/End: Complemental strand, 21161326 - 21161211
Alignment:
Q  630 gtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgt 729  Q
    |||| ||||||||||| ||||||||||||||||||||  |||| || |||||||||||||| || |||| |||| ||||||||||||| ||| |||||||    
T  21161326 gtatgattcacttttcacaacactttctacacacact--ttcttagctccattactgacttgagcgttggagtgctaacgtgcctgcagaca-ctttcgt 21161230  T
Q  730 tccacaccgcgaagactcatc 750  Q
    ||  |||||||||||||||||    
T  21161229 tc--caccgcgaagactcatc 21161211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 515 - 663
Target Start/End: Complemental strand, 16203922 - 16203774
Alignment:
Q  515 cacgcggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactt 614  Q
    |||| ||||||| |||||||||||||||||||| |||||||| | ||||| | |||| | || |||||||||  | |  || || |||||||||||||||    
T  16203922 cacgaggatcaccctacacgtgtcctctaaccgctccctaatcacacgccacgaaacacggagacggttatcaacgcgagctcctatataagggtgactt 16203823  T
Q  615 tgcttcaccctcaaggtataattcacttttcgcaacactttctacacac 663  Q
    | ||||||||| |||||||  ||||||||||  |||||||| |||||||    
T  16203822 ttcttcacccttaaggtatggttcacttttcataacactttatacacac 16203774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 594 - 756
Target Start/End: Complemental strand, 29373567 - 29373409
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| |||| |||||||| |||||||||||||||||||| ||||| ||||| ||||| |||||||  ||||||||||||| || ||  |||||||| ||    
T  29373567 gcgcctatatgagggtgacattgcttcaccctcaaggtatgattcaattttcacaacattttctac--acactctttctcaattacacaactgacttgag 29373470  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccacc 756  Q
      ||| |||  |||| ||||||||| |||||||||||   |||||| || |||||||||||||    
T  29373469 cattggagtcctaacatgcctgcatgcacctttcgtt--tcaccgcaaaaactcatcaccacc 29373409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 594 - 750
Target Start/End: Original strand, 13292093 - 13292245
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| |||||| |||||  ||||||||||||||||||| |  ||||||||| ||||||||  |||||  ||||||| |||||| |||||||||||| ||    
T  13292093 gcgcctatataatggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacac--actctttttcagtttcattactgacttgag 13292190  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatc 750  Q
     |||  |||| |||||| |||||| ||||||||| |||  |||| ||||||||||||    
T  13292191 cgttagagtgctaacgtacctgcagacacctttccttc--caccacgaagactcatc 13292245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 594 - 749
Target Start/End: Original strand, 16987062 - 16987213
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| ||||||||||||  |||||||||| | |||| | |  ||||||||| ||||||||  |||||  ||||||||||| ||||||||||| ||| ||    
T  16987062 gcgcctatataagggtgaacttgcttcacctttaagggacacatcacttttcacaacacttcttacac--actctttctcaattccattactggcttgag 16987159  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcat 749  Q
    |||   |||| ||||||||| |||| ||||||||||||  ||||||||||||||||    
T  16987160 tgtcagagtgctaacgtgcccgcatgcacctttcgttc--caccgcgaagactcat 16987213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 520 - 668
Target Start/End: Complemental strand, 16204486 - 16204338
Alignment:
Q  520 ggatcactctacacgtgtcctctaaccgttccctaattatacgccgcaaaacccagaaacggttatcttcacatgcgccaatataagggtgactttgctt 619  Q
    ||||||| |||||||||||||||||||| |||||||| | |||||   |||| | || |||||||||  | |  || || |||||||||||| ||| |||    
T  16204486 ggatcaccctacacgtgtcctctaaccgctccctaatcacacgccatgaaacacggagacggttatcaacgcgggctcctatataagggtgaattttctt 16204387  T
Q  620 caccctcaaggtataattcacttttcgcaacactttctacacacactct 668  Q
    |||||| |||||||  |||||||||| ||||||||| ||||||| ||||    
T  16204386 cacccttaaggtatggttcacttttcacaacactttatacacactctct 16204338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 623 - 747
Target Start/End: Original strand, 9867938 - 9868058
Alignment:
Q  623 cctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacac 722  Q
    ||||||||||| ||||||||||  |||||||||||||| ||  |||| |||||||||||||||||||| || ||   |||| |||||| ||||||| |||    
T  9867938 cctcaaggtatgattcacttttaacaacactttctacaaac--tcttcctcagttccattactgacttgagcgtcagagtgctaacgttcctgcatgcac 9868035  T
Q  723 ctttcgttccacaccgcgaagactc 747  Q
    |||||||  | ||||||||||||||    
T  9868036 ctttcgt--cccaccgcgaagactc 9868058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 670 - 734
Target Start/End: Original strand, 5925519 - 5925583
Alignment:
Q  670 tctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||||||||||||||||||| |  |||| |||| ||||||||||||| ||||||||||||||||    
T  5925519 tctcagttccattactgacttgatcgttggagtgctaacgtgcctgcagacacctttcgttccac 5925583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 604 - 715
Target Start/End: Original strand, 5928991 - 5929100
Alignment:
Q  604 aagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtg 703  Q
    |||||||| |||||||||||| ||||| | |  ||||||||| ||||||||  ||||| | |||||||  ||||||||||||||||| ||||||| ||||    
T  5928991 aagggtgaatttgcttcacccccaagggacacatcacttttcacaacacttcttacactctctctttc--agttccattactgacttgagtgttggagtg 5929088  T
Q  704 ttaacgtgcctg 715  Q
     ||| |||||||    
T  5929089 ctaatgtgcctg 5929100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 389 - 483
Target Start/End: Complemental strand, 13159685 - 13159591
Alignment:
Q  389 tgttctgaaccggcaagaagaccaatcccatattgacacgtggactatacatacactgccttaaggctcaacgctcgaaggaacaagccaacatc 483  Q
    ||||||| |||||| |||||  |||||| |   |||||||||||||| |||||||| |||||||||||| ||||  ||||||||| |||||||||    
T  13159685 tgttctggaccggccagaaggtcaatccaacgatgacacgtggactaaacatacaccgccttaaggctcgacgcctgaaggaacacgccaacatc 13159591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 594 - 734
Target Start/End: Original strand, 10287566 - 10287704
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaag 693  Q
    ||||| |||||||||| |  ||| | ||||||||||||||   ||||||||| ||||||||  |||||||  | |||||||| |||||||||||||| ||    
T  10287566 gcgcctatataagggtaaacttgttacaccctcaaggtatctctcacttttcacaacacttcttacacac--tttttctcagatccattactgacttgag 10287663  T
Q  694 tgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
     ||| | ||| |||||||||||||   |||||| |||||||    
T  10287664 cgttaaggtgctaacgtgcctgcaggaacctttggttccac 10287704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 670 - 734
Target Start/End: Complemental strand, 18774028 - 18773964
Alignment:
Q  670 tctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||||||||||||||||| || |  || |||||| |||||||||||||| |||||||||||||||    
T  18774028 tctcagttccattactgatttgatcgtcgaagtgctaacgtgcctgcatgcacctttcgttccac 18773964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 594 - 653
Target Start/End: Original strand, 43172006 - 43172065
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacact 653  Q
    ||||| ||||||||||||  ||||||||||||||| |||| ||||||||||| |||||||    
T  43172006 gcgcctatataagggtgaagttgcttcaccctcaatgtatgattcacttttcacaacact 43172065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 600 - 734
Target Start/End: Complemental strand, 34854358 - 34854226
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||| ||||||||||  ||| |  ||||||||| ||||| |||||  |||||||||||||||||| ||||||| |||| || ||       
T  34854358 atataagggtgaacttgtttcaccctcagagtacacatcacttttcacaaca-tttctt-acacactctttctcagtttcattactaacttgagcgtcag 34854261  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| ||||||| ||||| ||||| ||||||||||    
T  34854260 agtgctaacgtgtctgcaaacaccgttcgttccac 34854226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 628
Target Start/End: Complemental strand, 21161395 - 21161342
Alignment:
Q  575 gaaacggttatcttcacatgcgccaatataagggtgactttgcttcaccctcaa 628  Q
    ||||| |||||||||||  ||||| || ||||||||||||||||||||||||||    
T  21161395 gaaacagttatcttcacgagcgcctatgtaagggtgactttgcttcaccctcaa 21161342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 588 - 631
Target Start/End: Complemental strand, 13159487 - 13159444
Alignment:
Q  588 tcacatgcgccaatataagggtgactttgcttcaccctcaaggt 631  Q
    ||||||||||| |||||||||||| || ||||||||||||||||    
T  13159487 tcacatgcgcctatataagggtgatttagcttcaccctcaaggt 13159444  T

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Target: scaffold0140 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 569 - 734
Target Start/End: Complemental strand, 6445 - 6281
Alignment:
Q  569 aacccagaaacggttatcttca-catgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactc 667  Q
    ||||| || |||||||| |||| | |||||| |||||||| |||  ||||||||| |||||||||  | ||||||||| |||||||||||||||||  |     
T  6445 aacccggagacggttatgttcaacgtgcgcctatataaggatgaacttgcttcacgctcaaggtacgactcacttttcacaacactttctacacac--ta 6348  T
Q  668 tttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||||||||||||||||||||| ||  | |||||| ||||||||||||| |||||||| |||||||    
T  6347 tttctcagttccattactgacttgagcttcgaagtgctaacgtgcctgcaaacaccttttgttccac 6281  T

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Target: scaffold0360 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 600 - 734
Target Start/End: Complemental strand, 14037 - 13905
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  |||||||||||||||||||| |||||||| || |||||||||||||  |||||||||||||||| |||||||||||| ||  |||     
T  14037 atataagggtgatcttgcttcaccctcaaggtatgattcacttctcacaacactttctac--acactctttctcagtttcattactgacttgagctttgg 13940  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||  |||||||| | ||| |||||||||| ||||    
T  13939 agtactaacgtgcattcatgcacctttcgtcccac 13905  T

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Target: scaffold0054 (Bit Score: 58; Significance: 6e-24; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 600 - 718
Target Start/End: Original strand, 68778 - 68892
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||||| |||||||||||    | |||||||||||||||||||||| |||| || ||||     
T  68778 atataagggtgaccttgcttctccctcaaggtatgattcacttttcacaacactttct----atactctttctcagttccattactaacttgagcgttgg 68873  T
Q  700 agtgttaacgtgcctgcat 718  Q
    |||| ||||||| ||||||    
T  68874 agtgctaacgtgtctgcat 68892  T

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Target: scaffold0505 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 600 - 790
Target Start/End: Complemental strand, 8000 - 7814
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||| |||||| ||| ||||| |||||  ||| ||||||||||| |||||||||||||  ||||||||||||| || ||||||||| || || |||      
T  8000 atataatggtgacattgtttcacactcaaattatgattcacttttcacaacactttctac--acactctttctcaattgcattactgatttgagcgttag 7903  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcaccaccatatcggagtacgttccgccactgttgcctctca 790  Q
    |||| |||||||||| ||| |||||||| |||  ||||| ||||||||||| ||||| ||   |||||| || ||||||| ||||||||||    
T  7902 agtgctaacgtgcctacatgcacctttccttc--caccgtgaagactcatcgccaccgtaatagagtacttttcgccacttttgcctctca 7814  T

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Target: scaffold0205 (Bit Score: 56; Significance: 1e-22; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 600 - 734
Target Start/End: Original strand, 10891 - 11023
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||| |||||  ||| ||||||||||||||| |  ||||||||| ||||||||  ||||||| |||||||  |||||||||| |||||| || ||||     
T  10891 atataaaggtgaacttgtttcaccctcaaggtacacatcacttttcacaacacttcttacacactctctttc--agttccattattgacttgagcgttgg 10988  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| |||||||||||||||||||||| |||||||    
T  10989 agtgctaacgtgcctgcatacaccttttgttccac 11023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 602 - 734
Target Start/End: Complemental strand, 22999 - 22869
Alignment:
Q  602 ataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaag 701  Q
    ||||||||||  ||||||||||||||||||| |  ||||||||| ||||||||  |  ||||||  ||||||||||||||||||||||| || ||   ||    
T  22999 ataagggtgaacttgcttcaccctcaaggtacacgtcacttttcacaacacttctt--acacacgatttctcagttccattactgacttgagcgtcagag 22902  T
Q  702 tgttaacgtgcctgcatacacctttcgttccac 734  Q
    || ||||||||| |||  |||||||||| ||||    
T  22901 tgctaacgtgcccgcaggcacctttcgtcccac 22869  T

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Target: scaffold0291 (Bit Score: 55; Significance: 4e-22; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 600 - 689
Target Start/End: Original strand, 15406 - 15493
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgact 689  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||| |||||||||||  | | ||||||||||||||||||||||||||    
T  15406 atataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttct--agatactctttctcagttccattactgact 15493  T

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Target: scaffold0291; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 618 - 726
Target Start/End: Original strand, 8571 - 8676
Alignment:
Q  618 ttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgca 717  Q
    |||||||| ||||||| ||||||||||| |||||||||||  ||||||| ||| |||||| |||||||||||| || || |||||| ||||||| |||||    
T  8571 ttcacccttaaggtatgattcacttttcacaacactttct--acacactgtttttcagtttcattactgacttgagcgtcgaagtgctaacgtg-ctgca 8667  T
Q  718 tacaccttt 726  Q
     ||||||||    
T  8668 aacaccttt 8676  T

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Target: scaffold0103 (Bit Score: 50; Significance: 4e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 595 - 731
Target Start/End: Complemental strand, 40916 - 40782
Alignment:
Q  595 cgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagt 694  Q
    |||| ||| ||||||||  ||||||||||||||||||| |  |||||||||  ||||||| |||||| | |||||||  |||||||| |||||||| ||     
T  40916 cgcctataaaagggtgaacttgcttcaccctcaaggtacacatcacttttcataacacttcctacactctctctttc--agttccatcactgacttgagc 40819  T
Q  695 gttgaagtgttaacgtgcctgcatacacctttcgttc 731  Q
    |||| |||| |||||||||||||| | ||||||||||    
T  40818 gttggagtgctaacgtgcctgcatgcgcctttcgttc 40782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 45; Significance: 4e-16; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 600 - 731
Target Start/End: Complemental strand, 215387 - 215258
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    |||||||| |||  ||||||||||||||||||| |   |||||||| ||||||||  ||||||| |||||||  |||| |||||||||||| || ||||     
T  215387 atataaggatgaacttgcttcaccctcaaggtacacaacacttttcacaacacttcttacacactctctttc--agtttcattactgacttgagcgttgg 215290  T
Q  700 agtgttaacgtgcctgcatacacctttcgttc 731  Q
    | || ||||||||||||| ||| |||||||||    
T  215289 attgctaacgtgcctgcagacaactttcgttc 215258  T

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Target: scaffold0013 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 600 - 734
Target Start/End: Original strand, 4400 - 4532
Alignment:
Q  600 atataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttga 699  Q
    ||||||||||||  ||||||||||||||||||| |  ||| |||||  |||||||  ||||| | |||||||  |||| ||||| |||||| || ||||     
T  4400 atataagggtgaacttgcttcaccctcaaggtacacatcatttttcataacacttcttacactctctctttc--agtttcattagtgacttgagcgttgg 4497  T
Q  700 agtgttaacgtgcctgcatacacctttcgttccac 734  Q
    |||| |||||||| |||| ||||||||||||||||    
T  4498 agtgctaacgtgcttgcagacacctttcgttccac 4532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 602 - 690
Target Start/End: Original strand, 220 - 307
Alignment:
Q  602 ataagggtgactttgcttcaccctcaaggtataat-tcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    ||||||||||  ||||||||||||||||||| | | ||||||||| ||||||||  |||||  |||||||||||||||||||||||||||    
T  220 ataagggtgaacttgcttcaccctcaaggtacattctcacttttcacaacacttcttacac--actctttctcagttccattactgactt 307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 603 - 734
Target Start/End: Original strand, 21597 - 21726
Alignment:
Q  603 taagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagt 702  Q
    ||||||||| |||||||||||||||||||| |  ||||||| | ||||||||  || |||| |||||  |||||| || ||||||||| ||||||| |||    
T  21597 taagggtgaatttgcttcaccctcaaggtacacatcactttccacaacacttcttaaacactctctt--tcagtttcaatactgacttgagtgttggagt 21694  T
Q  703 gttaacgtgcctgcatacacctttcgttccac 734  Q
    | ||||||||| |||  |||  ||||||||||    
T  21695 gctaacgtgcccgcaggcacacttcgttccac 21726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 616 - 730
Target Start/End: Complemental strand, 35353 - 35240
Alignment:
Q  616 gcttcaccctcaaggtataattcactttt-cgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcct 714  Q
    ||||| ||||||| | || |||||||||| | ||||||||||  ||||||||||||||||||||| |||||||||| |||||   |||| ||||||||||    
T  35353 gcttccccctcaaaggatgattcactttttcacaacactttc--cacacactctttctcagttccgttactgacttgagtgtcagagtgctaacgtgcct 35256  T
Q  715 gcatacacctttcgtt 730  Q
    |||  ||| |||||||    
T  35255 gcaagcacatttcgtt 35240  T

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Target: scaffold0174 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 635 - 751
Target Start/End: Original strand, 29289 - 29399
Alignment:
Q  635 attcacttttcgcaacactttctacacacactctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccac 734  Q
    ||||||||||| |||||||||||||||    |||| || | || |||||||||||| || |||| |||| |||| || || ||| ||||||||||||  |    
T  29289 attcacttttcacaacactttctacac----tcttccttattttcattactgacttgagcgttggagtgctaacatgactccatgcacctttcgttc--c 29382  T
Q  735 accgcgaagactcatca 751  Q
    |||||||||||||||||    
T  29383 accgcgaagactcatca 29399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 664 - 752
Target Start/End: Original strand, 10756 - 10842
Alignment:
Q  664 actctttctcagttccattactgacttaagtgttgaagtgttaacgtgcctgcatacacctttcgttccacaccgcgaagactcatcac 752  Q
    ||||||||||||||||||||||||||| |  || | |||| |||| ||||| || ||||||||| |||  |||| ||||||||||||||    
T  10756 actctttctcagttccattactgacttgaacgtcggagtgctaacatgcctacagacacctttcattc--caccacgaagactcatcac 10842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 593 - 690
Target Start/End: Original strand, 6829 - 6924
Alignment:
Q  593 tgcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    |||||| ||| ||||||||  ||| ||||||||||||||| |  ||||||||| ||||||||  |  |||||||| ||||||||| || |||||||||    
T  6829 tgcgcctatacaagggtgaacttgtttcaccctcaaggtacacatcacttttcacaacacttctt--acacactcgttctcagtttcaatactgactt 6924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 594 - 690
Target Start/End: Original strand, 20467 - 20561
Alignment:
Q  594 gcgccaatataagggtgactttgcttcaccctcaaggtataattcacttttcgcaacactttctacacacactctttctcagttccattactgactt 690  Q
    ||||| ||||| |||||| |||  ||||||| ||||||| |  |||||||||  |||| |||||||||  |||||||||||||||| ||| ||||||    
T  20467 gcgcctatatatgggtgaatttatttcacccacaaggtacacatcacttttcataacattttctacac--actctttctcagttcctttagtgactt 20561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 614 - 659
Target Start/End: Original strand, 73792 - 73837
Alignment:
Q  614 ttgcttcaccctcaaggtataattcacttttcgcaacactttctac 659  Q
    |||||||||||| ||||||| ||| ||||||| |||||||||||||    
T  73792 ttgcttcaccctgaaggtatgatttacttttcacaacactttctac 73837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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