View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1783_low_34 (Length: 381)
Name: NF1783_low_34
Description: NF1783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1783_low_34 |
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Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 53 - 368
Target Start/End: Complemental strand, 9665567 - 9665253
Alignment:
| Q |
53 |
gaagagaaatggattagggatggtagtagtggaacgttgcttgaaagagacgacttgtaataatggaatttgaatactttaatttcagaacaagcttcac |
152 |
Q |
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| T |
9665567 |
gaagagaaatggattagggatggtagtagtggaacgttgcttgaaagagacgacttgtaataatggaatttgaatactttaatttcagaacaagcttcac |
9665468 |
T |
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| Q |
153 |
taggaagaaaggtaagaacagagtcacaatttccatgattctgtttttggaatgaaattggagtttcagaaaatttactgttgttcaatttttgattatg |
252 |
Q |
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| T |
9665467 |
taggaagaaaggtaagaacagagtcacaatttccatgattctgtttttagattgaaattggagtttcagaaaatttac-gttgtttaattttttattatg |
9665369 |
T |
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| Q |
253 |
tcttttaattttatagtatacttttcttttctagtaagaatgaagcagattaagttgttggacttggatgttaacaccatactcgttttactatactttt |
352 |
Q |
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| T |
9665368 |
tctttcaattttatagtatacttttcttttctagtaagaatgtagcagactaagttgctggacttggatgttaacagcatactcgttttactatactttt |
9665269 |
T |
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| Q |
353 |
cttgcaccaaattcat |
368 |
Q |
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| T |
9665268 |
cttacaccaaattcat |
9665253 |
T |
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