View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1783_low_61 (Length: 275)
Name: NF1783_low_61
Description: NF1783
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1783_low_61 |
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Alignment Details
Target: chr3 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 29335031 - 29334775
Alignment:
| Q |
1 |
agttcaaatatgtgttttagtgaggtgaatgtgaaaccattggttgacattgagaattcagcacctgaattaacattgaaactttgaaagggttaatgct |
100 |
Q |
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| T |
29335031 |
agttcaaatatgtgttttagtgaggtgaatgtgaaaccattggttgacattgagaattcagcacctgaattaacattgaaactttgaaagggttaatgct |
29334932 |
T |
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| Q |
101 |
attattacaaatctatgctttgatatttcactctatttttcttgttctataagagctctaggaagacaaatttagagcatctatgtatgtctactatata |
200 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29334931 |
attattacaaatctatgctttgatattttactctatttttcttgttctataagagctctaggaagacaaatttagagcatctatgtatgtctactatata |
29334832 |
T |
|
| Q |
201 |
tataaatcatgtttgtaattactctacacaacttccaccatgtttttctgtatcatc |
257 |
Q |
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| T |
29334831 |
tataaatcatgtttgtaattactctacacaacttccaccatgtttttgtgtatcatc |
29334775 |
T |
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