View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17840_low_4 (Length: 230)

Name: NF17840_low_4
Description: NF17840
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17840_low_4
NF17840_low_4
[»] chr8 (37 HSPs)
chr8 (82-213)||(24501812-24501943)
chr8 (82-213)||(26374429-26374560)
chr8 (82-213)||(42735276-42735407)
chr8 (82-213)||(42938116-42938247)
chr8 (82-213)||(42937427-42937558)
chr8 (82-213)||(2704818-2704949)
chr8 (82-213)||(5576619-5576750)
chr8 (82-213)||(7506898-7507029)
chr8 (83-213)||(10392237-10392367)
chr8 (82-202)||(23115168-23115288)
chr8 (82-212)||(4403184-4403314)
chr8 (89-212)||(9288463-9288586)
chr8 (89-212)||(14782141-14782264)
chr8 (89-212)||(44725816-44725939)
chr8 (89-212)||(10295386-10295510)
chr8 (89-212)||(26856144-26856267)
chr8 (89-212)||(43166696-43166819)
chr8 (92-212)||(18958736-18958856)
chr8 (82-213)||(43959733-43959854)
chr8 (89-212)||(19717887-19718010)
chr8 (82-211)||(41479175-41479294)
chr8 (92-212)||(39467477-39467597)
chr8 (88-210)||(4950021-4950143)
chr8 (82-197)||(39189815-39189928)
chr8 (92-193)||(13478258-13478360)
chr8 (89-212)||(18305977-18306090)
chr8 (108-211)||(8410421-8410526)
chr8 (89-212)||(7466412-7466525)
chr8 (89-212)||(16362273-16362386)
chr8 (89-212)||(32497602-32497715)
chr8 (159-213)||(32711358-32711412)
chr8 (82-146)||(9770439-9770503)
chr8 (148-212)||(42305850-42305914)
chr8 (159-212)||(4031334-4031387)
chr8 (159-212)||(31623772-31623825)
chr8 (148-212)||(37857196-37857260)
chr8 (94-135)||(32711305-32711346)
[»] chr6 (18 HSPs)
chr6 (82-213)||(6197477-6197608)
chr6 (83-211)||(2300738-2300866)
chr6 (82-213)||(1391699-1391830)
chr6 (82-209)||(29076678-29076805)
chr6 (82-209)||(29111652-29111779)
chr6 (82-213)||(28002740-28002871)
chr6 (82-208)||(7051925-7052051)
chr6 (89-212)||(31895772-31895895)
chr6 (89-212)||(34773485-34773608)
chr6 (89-212)||(14262439-14262562)
chr6 (89-212)||(34759056-34759179)
chr6 (89-212)||(7497152-7497274)
chr6 (89-212)||(31067569-31067682)
chr6 (89-197)||(4200443-4200541)
chr6 (89-212)||(30385075-30385186)
chr6 (117-177)||(657065-657122)
chr6 (82-131)||(2238668-2238717)
chr6 (83-123)||(11113733-11113773)
[»] chr5 (25 HSPs)
chr5 (82-213)||(7016738-7016869)
chr5 (82-213)||(21147143-21147274)
chr5 (88-213)||(5272924-5273049)
chr5 (82-211)||(33656040-33656169)
chr5 (88-213)||(139349-139474)
chr5 (96-211)||(849225-849341)
chr5 (82-213)||(27458949-27459080)
chr5 (88-213)||(32157899-32158027)
chr5 (89-212)||(14000111-14000234)
chr5 (82-212)||(1152102-1152232)
chr5 (116-213)||(6460868-6460965)
chr5 (89-212)||(13926008-13926131)
chr5 (89-212)||(39852422-39852545)
chr5 (92-212)||(4550266-4550386)
chr5 (89-208)||(7947579-7947698)
chr5 (82-212)||(9689735-9689864)
chr5 (122-212)||(14465266-14465356)
chr5 (89-212)||(5949185-5949298)
chr5 (148-212)||(4240517-4240581)
chr5 (148-208)||(1461203-1461263)
chr5 (143-208)||(22746378-22746443)
chr5 (89-208)||(40013718-40013827)
chr5 (82-152)||(9220716-9220786)
chr5 (89-146)||(37014037-37014094)
chr5 (159-210)||(37013993-37014044)
[»] chr4 (64 HSPs)
chr4 (82-213)||(41881082-41881213)
chr4 (82-213)||(25331206-25331337)
chr4 (82-213)||(41320885-41321016)
chr4 (82-213)||(55302918-55303049)
chr4 (83-213)||(32950837-32950967)
chr4 (82-212)||(39479355-39479485)
chr4 (82-211)||(12113022-12113151)
chr4 (82-213)||(1044882-1045013)
chr4 (82-213)||(34228583-34228714)
chr4 (82-213)||(37046450-37046582)
chr4 (82-213)||(1112968-1113099)
chr4 (82-213)||(7007449-7007580)
chr4 (82-213)||(42786759-42786890)
chr4 (82-213)||(30009677-30009808)
chr4 (82-211)||(3436670-3436799)
chr4 (112-213)||(7249795-7249896)
chr4 (82-198)||(24130981-24131098)
chr4 (82-213)||(22202090-22202221)
chr4 (107-212)||(19740933-19741038)
chr4 (82-209)||(46635648-46635769)
chr4 (111-213)||(25446125-25446227)
chr4 (112-213)||(28541773-28541874)
chr4 (82-213)||(31314742-31314863)
chr4 (82-213)||(53275914-53276046)
chr4 (89-212)||(5441480-5441603)
chr4 (89-212)||(27768132-27768255)
chr4 (89-212)||(54341220-54341343)
chr4 (82-213)||(27454078-27454209)
chr4 (89-212)||(37828409-37828532)
chr4 (89-212)||(54853475-54853598)
chr4 (89-212)||(32322167-32322290)
chr4 (89-212)||(48261203-48261326)
chr4 (91-211)||(44770862-44770982)
chr4 (89-212)||(51320997-51321120)
chr4 (83-212)||(40537161-40537280)
chr4 (119-208)||(9163156-9163245)
chr4 (92-212)||(37915903-37916023)
chr4 (89-176)||(8711978-8712065)
chr4 (126-213)||(23465030-23465117)
chr4 (82-157)||(11090435-11090510)
chr4 (139-214)||(25504696-25504771)
chr4 (89-211)||(56445362-56445474)
chr4 (82-212)||(39307253-39307383)
chr4 (89-176)||(24736447-24736534)
chr4 (89-212)||(23987290-23987403)
chr4 (89-211)||(12913301-12913413)
chr4 (89-212)||(36479249-36479361)
chr4 (89-208)||(41725205-41725321)
chr4 (126-211)||(28371001-28371086)
chr4 (146-212)||(29649731-29649797)
chr4 (126-198)||(20021423-20021495)
chr4 (89-212)||(30967316-30967429)
chr4 (88-197)||(41581795-41581903)
chr4 (89-212)||(49501526-49501641)
chr4 (89-212)||(49507591-49507706)
chr4 (83-212)||(28483975-28484093)
chr4 (159-212)||(32684065-32684118)
chr4 (159-212)||(49834890-49834943)
chr4 (159-212)||(5800054-5800107)
chr4 (148-212)||(50018327-50018391)
chr4 (92-146)||(32684018-32684072)
chr4 (107-156)||(36727974-36728023)
chr4 (89-146)||(49834840-49834897)
chr4 (90-182)||(12193135-12193227)
[»] chr3 (60 HSPs)
chr3 (82-213)||(996086-996217)
chr3 (82-213)||(3999645-3999776)
chr3 (82-213)||(10139146-10139277)
chr3 (82-213)||(20498284-20498415)
chr3 (82-213)||(33807798-33807929)
chr3 (82-213)||(19253902-19254033)
chr3 (82-213)||(37820477-37820608)
chr3 (82-213)||(54625667-54625798)
chr3 (82-213)||(3206205-3206336)
chr3 (82-213)||(6589639-6589770)
chr3 (82-213)||(29448858-29448989)
chr3 (88-214)||(33996547-33996673)
chr3 (82-213)||(44762037-44762168)
chr3 (82-213)||(40246919-40247050)
chr3 (82-213)||(35337810-35337939)
chr3 (82-208)||(6035053-6035179)
chr3 (82-210)||(25418444-25418572)
chr3 (83-213)||(52114604-52114734)
chr3 (82-213)||(53929128-53929259)
chr3 (82-211)||(5825139-5825268)
chr3 (82-170)||(6131233-6131321)
chr3 (97-213)||(51699495-51699611)
chr3 (89-212)||(18749688-18749811)
chr3 (89-212)||(54628920-54629043)
chr3 (89-211)||(40897221-40897343)
chr3 (117-213)||(22057837-22057933)
chr3 (89-212)||(26107337-26107460)
chr3 (89-212)||(32580252-32580375)
chr3 (89-212)||(34484037-34484160)
chr3 (89-212)||(36674137-36674260)
chr3 (82-193)||(1439894-1440005)
chr3 (89-212)||(11431602-11431725)
chr3 (89-208)||(17946368-17946487)
chr3 (89-212)||(44906520-44906643)
chr3 (102-212)||(51737746-51737856)
chr3 (82-212)||(27899420-27899540)
chr3 (90-212)||(29030081-29030203)
chr3 (89-212)||(31646293-31646414)
chr3 (89-212)||(52617978-52618095)
chr3 (89-212)||(48379233-48379356)
chr3 (89-212)||(50903247-50903370)
chr3 (89-212)||(52810454-52810577)
chr3 (136-213)||(1440006-1440083)
chr3 (93-212)||(20833068-20833187)
chr3 (114-208)||(55235264-55235359)
chr3 (82-213)||(52080002-52080117)
chr3 (82-135)||(33807680-33807733)
chr3 (148-212)||(10660611-10660675)
chr3 (89-212)||(10728658-10728771)
chr3 (89-212)||(39038116-39038229)
chr3 (83-157)||(44276506-44276580)
chr3 (89-212)||(37454937-37455050)
chr3 (82-208)||(39842494-39842610)
chr3 (89-212)||(50762067-50762180)
chr3 (154-212)||(539476-539534)
chr3 (100-157)||(6975867-6975924)
chr3 (159-212)||(23753463-23753516)
chr3 (89-146)||(45862983-45863040)
chr3 (89-157)||(15492874-15492942)
chr3 (90-145)||(12103733-12103789)
[»] chr2 (32 HSPs)
chr2 (82-213)||(24776432-24776563)
chr2 (82-214)||(14198579-14198711)
chr2 (82-213)||(16269768-16269899)
chr2 (82-213)||(20605313-20605444)
chr2 (82-213)||(31170626-31170757)
chr2 (82-209)||(5093049-5093176)
chr2 (82-213)||(12407457-12407588)
chr2 (88-213)||(32125330-32125455)
chr2 (88-213)||(35317139-35317264)
chr2 (82-209)||(43847727-43847854)
chr2 (82-213)||(305467-305598)
chr2 (82-213)||(22551765-22551896)
chr2 (102-213)||(1789519-1789630)
chr2 (82-213)||(9120203-9120334)
chr2 (89-212)||(28844633-28844756)
chr2 (89-212)||(33135701-33135823)
chr2 (89-212)||(18177345-18177468)
chr2 (82-213)||(44765852-44765974)
chr2 (89-197)||(43078656-43078764)
chr2 (89-212)||(10657484-10657607)
chr2 (89-212)||(25288237-25288360)
chr2 (105-212)||(26788864-26788971)
chr2 (89-212)||(28740302-28740415)
chr2 (82-208)||(10125302-10125418)
chr2 (148-212)||(7026682-7026746)
chr2 (89-211)||(13833441-13833553)
chr2 (89-212)||(3463750-3463863)
chr2 (148-211)||(379016-379079)
chr2 (150-212)||(26601270-26601332)
chr2 (159-212)||(6224626-6224679)
chr2 (159-208)||(3574929-3574978)
chr2 (89-146)||(6224576-6224633)
[»] chr7 (60 HSPs)
chr7 (83-213)||(43581090-43581220)
chr7 (82-214)||(34695349-34695481)
chr7 (82-213)||(973261-973392)
chr7 (82-213)||(7718361-7718492)
chr7 (82-213)||(7719259-7719390)
chr7 (82-213)||(40996648-40996779)
chr7 (82-213)||(44343395-44343526)
chr7 (82-213)||(18914734-18914865)
chr7 (82-213)||(30440873-30441004)
chr7 (82-212)||(32142916-32143046)
chr7 (82-211)||(12893487-12893616)
chr7 (82-213)||(47914343-47914474)
chr7 (82-211)||(39219376-39219504)
chr7 (82-212)||(10068538-10068668)
chr7 (82-211)||(20275262-20275391)
chr7 (82-214)||(7113528-7113660)
chr7 (82-213)||(34009090-34009221)
chr7 (82-213)||(47879245-47879376)
chr7 (112-214)||(43679490-43679592)
chr7 (89-212)||(23101369-23101492)
chr7 (89-212)||(28342418-28342541)
chr7 (89-212)||(3022997-3023120)
chr7 (89-212)||(28034811-28034934)
chr7 (89-208)||(29614770-29614889)
chr7 (89-212)||(39784170-39784293)
chr7 (110-212)||(12963772-12963874)
chr7 (89-212)||(9882243-9882365)
chr7 (89-212)||(18838460-18838583)
chr7 (82-212)||(12740444-12740573)
chr7 (82-211)||(43187356-43187485)
chr7 (92-211)||(33382709-33382828)
chr7 (89-211)||(7993214-7993336)
chr7 (89-212)||(8675404-8675527)
chr7 (89-198)||(37972873-37972982)
chr7 (82-157)||(9179996-9180071)
chr7 (113-212)||(25805763-25805862)
chr7 (89-198)||(41827389-41827498)
chr7 (101-209)||(727594-727692)
chr7 (92-212)||(44256775-44256895)
chr7 (150-213)||(31638952-31639015)
chr7 (82-212)||(3797066-3797186)
chr7 (89-157)||(19810915-19810983)
chr7 (126-209)||(10676463-10676546)
chr7 (117-212)||(32883853-32883948)
chr7 (99-177)||(10617024-10617102)
chr7 (83-212)||(19251610-19251729)
chr7 (148-212)||(44121965-44122029)
chr7 (89-212)||(509727-509840)
chr7 (148-212)||(40460772-40460836)
chr7 (89-211)||(29585586-29585698)
chr7 (110-212)||(1470261-1470362)
chr7 (92-154)||(44623295-44623357)
chr7 (146-212)||(46405494-46405560)
chr7 (148-212)||(37327998-37328062)
chr7 (159-212)||(17001099-17001152)
chr7 (159-212)||(47066775-47066828)
chr7 (153-212)||(447854-447913)
chr7 (92-212)||(33892269-33892379)
chr7 (148-196)||(39028184-39028232)
chr7 (89-146)||(17001049-17001106)
[»] chr1 (46 HSPs)
chr1 (82-214)||(49198269-49198401)
chr1 (82-213)||(6304252-6304383)
chr1 (82-213)||(19451808-19451939)
chr1 (82-213)||(47654351-47654482)
chr1 (82-213)||(50192550-50192681)
chr1 (82-210)||(21222219-21222347)
chr1 (82-213)||(45760009-45760140)
chr1 (82-213)||(35279741-35279872)
chr1 (82-212)||(28824373-28824502)
chr1 (82-212)||(35679128-35679258)
chr1 (82-212)||(31572197-31572327)
chr1 (82-213)||(45536013-45536150)
chr1 (87-213)||(49418153-49418279)
chr1 (92-212)||(32588963-32589083)
chr1 (82-213)||(47780780-47780911)
chr1 (82-208)||(9577432-9577558)
chr1 (82-213)||(29556173-29556305)
chr1 (89-212)||(6312644-6312767)
chr1 (89-212)||(29396395-29396518)
chr1 (82-208)||(37014640-37014766)
chr1 (92-212)||(51701650-51701770)
chr1 (89-212)||(48177469-48177592)
chr1 (90-212)||(46328112-46328234)
chr1 (117-213)||(730218-730314)
chr1 (89-212)||(25612227-25612350)
chr1 (89-212)||(28387400-28387523)
chr1 (111-208)||(48524393-48524490)
chr1 (89-212)||(9322507-9322630)
chr1 (89-212)||(15835060-15835183)
chr1 (82-212)||(33025583-33025703)
chr1 (89-212)||(38536106-38536219)
chr1 (89-212)||(38558324-38558437)
chr1 (82-212)||(48668785-48668905)
chr1 (150-209)||(955823-955882)
chr1 (126-212)||(51085865-51085951)
chr1 (89-212)||(29219356-29219469)
chr1 (159-212)||(18798561-18798614)
chr1 (92-212)||(45272656-45272765)
chr1 (116-212)||(47784456-47784542)
chr1 (90-192)||(38319996-38320098)
chr1 (93-157)||(5495117-5495181)
chr1 (90-146)||(18798607-18798663)
chr1 (168-212)||(49230956-49231000)
chr1 (159-209)||(31622536-31622586)
chr1 (82-119)||(48524805-48524842)
chr1 (118-146)||(955876-955904)
[»] scaffold0400 (1 HSPs)
scaffold0400 (82-213)||(15033-15164)
[»] scaffold0365 (1 HSPs)
scaffold0365 (82-213)||(15676-15807)
[»] scaffold0151 (1 HSPs)
scaffold0151 (82-213)||(38605-38735)
[»] scaffold0004 (1 HSPs)
scaffold0004 (82-213)||(102171-102302)
[»] scaffold0113 (1 HSPs)
scaffold0113 (82-213)||(38895-39026)
[»] scaffold0037 (1 HSPs)
scaffold0037 (85-213)||(100287-100415)
[»] scaffold0276 (1 HSPs)
scaffold0276 (83-213)||(540-670)
[»] scaffold1504 (1 HSPs)
scaffold1504 (89-212)||(941-1063)
[»] scaffold0543 (1 HSPs)
scaffold0543 (89-212)||(10637-10760)
[»] scaffold0110 (1 HSPs)
scaffold0110 (89-212)||(39624-39747)
[»] scaffold0054 (1 HSPs)
scaffold0054 (89-210)||(36914-37035)
[»] scaffold0042 (1 HSPs)
scaffold0042 (89-212)||(58083-58206)
[»] scaffold0839 (1 HSPs)
scaffold0839 (102-188)||(3712-3798)
[»] scaffold0347 (1 HSPs)
scaffold0347 (82-157)||(14892-14967)
[»] scaffold0922 (1 HSPs)
scaffold0922 (152-212)||(4277-4337)
[»] scaffold0306 (1 HSPs)
scaffold0306 (148-212)||(13959-14023)
[»] scaffold0152 (1 HSPs)
scaffold0152 (148-212)||(21304-21368)
[»] scaffold0007 (1 HSPs)
scaffold0007 (116-209)||(199905-199998)


Alignment Details
Target: chr8 (Bit Score: 120; Significance: 2e-61; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 24501812 - 24501943
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24501812 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 24501911  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  24501912 ccttcgaaatttgaatgattttgaataccact 24501943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 26374429 - 26374560
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  26374429 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 26374528  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  26374529 ccttcgaaatttgaatgattttgaataccact 26374560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 42735276 - 42735407
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42735276 caatcctaagaaatctcatgtttttatgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42735375  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
     ||||||||||||||| ||||| |||||||||    
T  42735376 acttcgaaatttgaatgattttgaataccact 42735407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 42938116 - 42938247
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42938116 caatcctaagaaatctcatgttttcatgaaagactttttcaggctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42938215  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  42938216 ccttcgaaatttgaatgattttgaataccact 42938247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 42937558 - 42937427
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42937558 caatcataagaaatctcatgttttcatgaaagactttttaatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 42937459  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  42937458 ccttcgaaatttgaatgattttgaataccact 42937427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 2704818 - 2704949
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2704818 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatatcactagaaaatcccacaaaatccatcaaaatttgatttattaaacaat 2704917  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | |||||||||||||| ||||| |||||||||    
T  2704918 cattcgaaatttgaatgattttgaataccact 2704949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 5576619 - 5576750
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  5576619 caatcctaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctggtttattaaacaat 5576718  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
     ||||||||||||||| ||||| |||||||||    
T  5576719 tcttcgaaatttgaatgattttgaataccact 5576750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 7506898 - 7507029
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7506898 caatcctaagaaatctcatgtttacatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7506997  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||| ||||||||||  |||| |||||||||    
T  7506998 ccttcaaaatttgaatggttttgaataccact 7507029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 10392237 - 10392367
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    |||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10392237 aatcctaataaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 10392336  T
Q  183 cttcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||||| ||| | |||||||||    
T  10392337 cttcgaaatttgaatgattctgaataccact 10392367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 82 - 202
Target Start/End: Original strand, 23115168 - 23115288
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23115168 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 23115267  T
Q  182 ccttcgaaatttgaataattt 202  Q
    ||||| |||||||||| ||||    
T  23115268 ccttccaaatttgaatgattt 23115288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 4403314 - 4403184
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| |||||||||||| |||| ||||||||||||||| || ||||||| ||||| |||||||||||||||||||||||| |  ||||||||||||||    
T  4403314 caatcccaagaaatctcatattttcatgaaagactttttcttgttaaaattacactaaaaaatcccacaaaatccatcaaaacccaatttattaaacaat 4403215  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    |||||||||||||||| ||||| ||||||||    
T  4403214 ccttcgaaatttgaatgattttgaataccac 4403184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 9288463 - 9288586
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  9288463 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 9288562  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  9288563 aatttgaatgattttgaataccac 9288586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 14782141 - 14782264
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  14782141 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14782240  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  14782241 aatttgaatgattttgaataccac 14782264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 44725816 - 44725939
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  44725816 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 44725915  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  44725916 aatttgaatgattttgaataccac 44725939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 10295386 - 10295510
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatccttcg 187  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| |||||||||||||| ||||||||||||  ||||||||||||||||||||    
T  10295386 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaaatccatcaaaatccaatttattaaacaatccttcg 10295485  T
Q  188 aaatttgaataattttcaataccac 212  Q
    |||||||||| ||||| ||||||||    
T  10295486 aaatttgaatgattttgaataccac 10295510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 26856267 - 26856144
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || ||||| |||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  26856267 aagaaatcttatttttttctgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatacttcga 26856168  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  26856167 aatttgaatgattttgaataccac 26856144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 43166696 - 43166819
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| ||| | ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  43166696 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 43166795  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  43166796 aatttgaatgattttgaataccac 43166819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 18958736 - 18958856
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    |||||| || |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||    
T  18958736 aaatctaatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaatccttcgaaat 18958835  T
Q  192 ttgaataattttcaataccac 212  Q
    |||||| ||||| ||||||||    
T  18958836 ttgaatgattttgaataccac 18958856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 43959854 - 43959733
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| || |||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||    
T  43959854 caatcataagaaatctcatgttttaattaaagactttttcatgctaaaatttcac----------cacaaaatccatcaaaatctgatttattaaacaat 43959765  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | |||||||||||||| ||||| |||||||||    
T  43959764 cattcgaaatttgaatgattttgaataccact 43959733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 19717887 - 19718010
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| || |||||||||||| || ||||||| ||||| ||||||||||||||||||| ||||||  |||||||||||||| ||||||    
T  19717887 aagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccattaaaatccaatttattaaacaattcttcga 19717986  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  19717987 aatttgaatgattttgaataccac 19718010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 41479294 - 41479175
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||          ||||||||||||||||||||    
T  41479294 caatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaattttactagaaaatcccacaa----------aatctgatttattaaacaat 41479205  T
Q  182 ccttcgaaatttgaataattttcaatacca 211  Q
    | |||||||||||||| ||||| |||||||    
T  41479204 cattcgaaatttgaatgattttgaatacca 41479175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 39467477 - 39467597
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| |||||||| |||||| || ||||||| ||||| ||||||||| |||||||||||||||   ||||||||||||||||||||||||    
T  39467477 aaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcgaaat 39467576  T
Q  192 ttgaataattttcaataccac 212  Q
    |||||| ||||| ||||||||    
T  39467577 ttgaatgattttgaataccac 39467597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 4950021 - 4950143
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    |||||||||| ||||||  |||||| | ||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||| |||| || |    
T  4950021 taagaaatcttatgtttgcatgaaatattttttcatgctaaaatttcactagaaaattccacaaattccatcaaaatctaatttattaaataatcttttg 4950120  T
Q  188 aaatttgaataattttcaatacc 210  Q
    ||| |||||| ||||| ||||||    
T  4950121 aaacttgaatgattttgaatacc 4950143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 82 - 197
Target Start/End: Original strand, 39189815 - 39189928
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| ||||||||||||||||| |||||||| |||||| || |||||||| |||||||||| |  |||||||||||||| ||  ||||||||||||||    
T  39189815 caatcccaagaaatctcatgttttcatgaaagattttttcttgttaaaattt-actagaaaattcatcaaaatccatcaaattc-aatttattaaacaat 39189912  T
Q  182 ccttcgaaatttgaat 197  Q
    ||||||||||||||||    
T  39189913 ccttcgaaatttgaat 39189928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 92 - 193
Target Start/End: Original strand, 13478258 - 13478360
Alignment:
Q  92 aaatctcatgttttt-atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaa 190  Q
    |||||| |||||||| || ||||||||| ||||||||||||||  ||| ||||||| |||||||||| | |||||| |||||||||||||||||||||||    
T  13478258 aaatcttatgtttttcataaaagactttatcatgctaaaatttagctaaaaaatcctacaaaatccaacgaaatctaatttattaaacaatccttcgaaa 13478357  T
Q  191 ttt 193  Q
    |||    
T  13478358 ttt 13478360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 18305977 - 18306090
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||          ||||||||||||||| |||||    
T  18305977 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatctttcga 18306066  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  18306067 aatttgaatgattttgaataccac 18306090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 8410421 - 8410526
Alignment:
Q  108 tgaaagactttttcatgctaaaatttcactagaaaa--tcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttca 205  Q
    ||||||||||| |||| |||||||||||||| ||||  ||||||||||||||||||| ||  ||||| ||||||||||||| |||||| ||| ||||| |    
T  8410421 tgaaagactttgtcatactaaaatttcactaaaaaaaatcccacaaaatccatcaaagtccaatttagtaaacaatccttccaaatttcaatgattttga 8410520  T
Q  206 atacca 211  Q
    ||||||    
T  8410521 atacca 8410526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 7466525 - 7466412
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||| |||| |    
T  7466525 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaattcttcaa 7466436  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  7466435 aatttgaatgattttgaataccac 7466412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 16362386 - 16362273
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| ||||||| ||||| |||||| || ||||||| ||||          ||||||||||||||||||  |||||||||||||||||||||    
T  16362386 aagaaatctcatctttttataaaagattttttcttgttaaaattacact----------acaaaatccatcaaaatccaatttattaaacaatccttcga 16362297  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  16362296 aatttgaatgattttgaataccac 16362273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 32497715 - 32497602
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||||||| || || ||||||| ||||| ||||||||||||||||||          ||||||||||||||| |||||    
T  32497715 aagaaatctcatcttttcatgaaagactttctcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcattcga 32497626  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  32497625 aatttgaatgattttgaataccac 32497602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 213
Target Start/End: Original strand, 32711358 - 32711412
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  32711358 caaaatctgatttattaaacaatccttcgaaatttaaatgattttgaataccact 32711412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 146
Target Start/End: Original strand, 9770439 - 9770503
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcc 146  Q
    |||||||||||||||||||||||| |||||| | ||||| ||| |||||||||| ||||||||||    
T  9770439 caatcctaagaaatctcatgttttgatgaaatatttttttatgttaaaatttcattagaaaatcc 9770503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 42305850 - 42305914
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||| ||||||  ||| |||||||||||||||||||||||||| ||||| ||||||||    
T  42305850 acaaaatccattaaaatccaattgattaaacaatccttcgaaatttgaattattttgaataccac 42305914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 4031334 - 4031387
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  4031334 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 4031387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 31623825 - 31623772
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  31623825 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 31623772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 37857260 - 37857196
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||  ||||||||||||||||||  |||||||||| | ||| ||||||||    
T  37857260 acaaaatccatcaaaatccaatttattaaacaatcctttaaaatttgaatgaatttgaataccac 37857196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 135
Target Start/End: Original strand, 32711305 - 32711346
Alignment:
Q  94 atctcatgtttttatgaaagactttttcatgctaaaatttca 135  Q
    ||||| |||||| |||||||||||||||||||||||||||||    
T  32711305 atctcttgttttcatgaaagactttttcatgctaaaatttca 32711346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 2e-61; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 6197477 - 6197608
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6197477 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 6197576  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  6197577 ccttcgaaatttgaatgattttgaataccact 6197608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 83 - 211
Target Start/End: Original strand, 2300738 - 2300866
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  2300738 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaatc 2300837  T
Q  183 cttcgaaatttgaataattttcaatacca 211  Q
    ||||||||||||||| |||||||||||||    
T  2300838 cttcgaaatttgaatgattttcaatacca 2300866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 1391830 - 1391699
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1391830 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 1391731  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||| |||||||||| ||||| |||||||||    
T  1391730 ccttccaaatttgaatgattttgaataccact 1391699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 29076805 - 29076678
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  29076805 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29076706  T
Q  182 ccttcgaaatttgaataattttcaatac 209  Q
    |||||||||||||||| ||||| |||||    
T  29076705 ccttcgaaatttgaatgattttgaatac 29076678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 29111779 - 29111652
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  29111779 caatcctaaaaaatctcatgtttttatgaaagattttttcatgctaaaatttcactagaaaatcctataaaatccatcaaaatctgatttattaaacaat 29111680  T
Q  182 ccttcgaaatttgaataattttcaatac 209  Q
    |||||||||||||||| ||||| |||||    
T  29111679 ccttcgaaatttgaatgattttgaatac 29111652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 28002871 - 28002740
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||   ||||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  28002871 caatcctaagaagcttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatttcacaaaatccatcaaaatctgatttattaaacaat 28002772  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||| |||||||||| ||||| |||| ||||    
T  28002771 ccttccaaatttgaatgattttgaatatcact 28002740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 7052051 - 7051925
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  7052051 caattctaagaaatctcatgattttatgaaaaactttttcatgctaaaattttactagaaaatcctacaaaatccatcaaaatccaatttattaaacaat 7051952  T
Q  182 ccttcgaaatttgaataattttcaata 208  Q
    |||||||||||||||| ||||| ||||    
T  7051951 ccttcgaaatttgaatgattttgaata 7051925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 31895895 - 31895772
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  31895895 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactagaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 31895796  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  31895795 aatttgaatgattttgaataccac 31895772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 34773608 - 34773485
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||  ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34773608 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactgcaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34773509  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  34773508 aatttgaatgattttgaataccac 34773485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 14262439 - 14262562
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||| ||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  14262439 aagaaatcccatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 14262538  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||| ||| ||||| ||||||||    
T  14262539 aatttaaatgattttgaataccac 14262562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 34759056 - 34759179
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  34759056 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttgga 34759155  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  34759156 aatttgaatgattttgaataccac 34759179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 7497274 - 7497152
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||| ||||||||||||||||||  |||||||||||| ||||||||    
T  7497274 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc-acaaaatccatcaaaatccaatttattaaacactccttcga 7497176  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  7497175 aatttgaatgattttgaataccac 7497152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 31067682 - 31067569
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||||||||||    
T  31067682 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 31067593  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  31067592 aatttgaatgattttgaataccac 31067569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 4200443 - 4200541
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||||||    
T  4200443 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcga 4200532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 30385075 - 30385186
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||||||| |  || ||||||| ||||| ||||||||||||||||||          |||||||||||||||||||||    
T  30385075 aagaaatctcatcttttcatgaaagactttgt--tgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcga 30385162  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  30385163 aatttgaatgattttgaataccac 30385186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 657122 - 657065
Alignment:
Q  117 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaa 177  Q
    |||||||| |||||||||||||   ||||||||||||||||||| |||| |||||||||||    
T  657122 ttttcatgataaaatttcacta---aatcccacaaaatccatcagaatcagatttattaaa 657065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 2238717 - 2238668
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaat 131  Q
    ||||| |||||||||||||||||| |||||||| |||||||| |||||||    
T  2238717 caatcttaagaaatctcatgttttcatgaaagattttttcatactaaaat 2238668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 123
Target Start/End: Original strand, 11113733 - 11113773
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcat 123  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  11113733 aatcctaagaaatctcatgttttcatgaaagacgttttcat 11113773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 2e-61; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 7016738 - 7016869
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7016738 caattctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7016837  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  7016838 ccttcgaaatttgaatgattttgaataccact 7016869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 21147274 - 21147143
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21147274 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 21147175  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  21147174 ccttcgaaatttgaatgattttgaataccact 21147143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 5272924 - 5273049
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  5272924 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcg 5273023  T
Q  188 aaatttgaataattttcaataccact 213  Q
    |||||||||| ||||| |||||||||    
T  5273024 aaatttgaatgattttgaataccact 5273049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 82 - 211
Target Start/End: Original strand, 33656040 - 33656169
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33656040 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33656139  T
Q  182 ccttcgaaatttgaataattttcaatacca 211  Q
    |||||||||||||||| ||||| |||||||    
T  33656140 ccttcgaaatttgaatgattttgaatacca 33656169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 139474 - 139349
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    ||||||||||||||||||||||||||||||||||||  |||||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||||    
T  139474 taagaaatctcatgtttttatgaaagactttttcatattaaaatttcactggaaaatccaacaaaatccatcaaaatctggtttattaaacaatccttcg 139375  T
Q  188 aaatttgaataattttcaataccact 213  Q
    |||||||||| ||||| |||||||||    
T  139374 aaatttgaatgattttgaataccact 139349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 96 - 211
Target Start/End: Complemental strand, 849341 - 849225
Alignment:
Q  96 ctcatgttttt-atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttg 194  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  849341 ctcatgtttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatctatcaaaatctgatttattaaacaatccttcgaaatttg 849242  T
Q  195 aataattttcaatacca 211  Q
    ||| ||||| |||||||    
T  849241 aatgattttgaatacca 849225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 27458949 - 27459080
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27458949 caatcctaagaaatatcatgttttcatgaatgattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaat 27459048  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||| |||| ||||| ||||| |||||||||    
T  27459049 ccttcaaaatctgaatgattttgaataccact 27459080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 32157899 - 32158027
Alignment:
Q  88 taagaaatctcatgtttttatgaaagact---ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcct 184  Q
    |||||||||||||||||| ||||||||||   ||||| ||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  32157899 taagaaatctcatgttttcatgaaagactattttttcgtgctaaaattttactagaaaatcccacaaaatccgtcaaaatctaatttattaaacaatcct 32157998  T
Q  185 tcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||| ||||| |||||||||    
T  32157999 tcgaaatttgaatgattttgaataccact 32158027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 14000111 - 14000234
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  14000111 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 14000210  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  14000211 aatttgaatgattttgaataccac 14000234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 1152102 - 1152232
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||| |||| || |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  1152102 caatcttaagaaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaat 1152201  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    || ||||||||||||| ||||| ||||||||    
T  1152202 ccctcgaaatttgaatgattttgaataccac 1152232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 116 - 213
Target Start/End: Complemental strand, 6460965 - 6460868
Alignment:
Q  116 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccact 213  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||    
T  6460965 tttttcatgataaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaaaccttcgaaatttgaatgattttgaataccact 6460868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 13926131 - 13926008
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||| |||| ||||  |||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  13926131 aagaaatatcatcttttcttgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 13926032  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  13926031 aatttgaatgattttgaataccac 13926008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 39852545 - 39852422
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||  ||||| |||||||||||||||    
T  39852545 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttagtaaacaatccttcga 39852446  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  39852445 aatttgaatgattttgaataccac 39852422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 4550266 - 4550386
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| |||||||||| |||| || ||||||| ||||| ||||| ||||||||||||||||||||  ||||||||||||||||||||||||    
T  4550266 aaatctcatcttttcatgaaagactctttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 4550365  T
Q  192 ttgaataattttcaataccac 212  Q
    |||||| ||||| ||||||||    
T  4550366 ttgaatgattttgaataccac 4550386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 7947579 - 7947698
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||| | |||| ||||||||||||||| || ||||||| ||||| ||||| ||||||||||||||||||||  |||||||||||||||||||||    
T  7947579 aagaaatctcttcttttcatgaaagactttttcttgttaaaattacactacaaaattccacaaaatccatcaaaatccaatttattaaacaatccttcga 7947678  T
Q  189 aatttgaataattttcaata 208  Q
    ||||||||| ||||| ||||    
T  7947679 aatttgaatgattttgaata 7947698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 9689864 - 9689735
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||| |||||||||||||||||||||||||  |||||||| || |||||||| |||| ||||||||||||||| |||||| |||||||    
T  9689864 caatcataagaaatcttatgtttttatgaaagactttttcataataaaattttacaagaaaatctcacacaatccatcaaaatctaatttatcaaacaat 9689765  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    | |||||||||| ||| ||||| ||||||||    
T  9689764 cattcgaaattt-aatgattttaaataccac 9689735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 14465266 - 14465356
Alignment:
Q  122 atgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||||| | |||||||||| ||||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||| ||||||||    
T  14465266 atgctaaaatattactagaaaattccacaaaattcatcaaaatccgatttattaaacaatctttcgaaatttgaatgattttgaataccac 14465356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 5949298 - 5949185
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||||||    
T  5949298 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcga 5949209  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  5949208 aatttgaatgattttgaataccac 5949185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 4240517 - 4240581
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  4240517 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 4240581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 1461203 - 1461263
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaata 208  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||    
T  1461203 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaata 1461263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 143 - 208
Target Start/End: Complemental strand, 22746443 - 22746378
Alignment:
Q  143 atcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaata 208  Q
    ||||||||||||||||||||||   ||||||||||||||| |||||||||||||| ||||| ||||    
T  22746443 atcccacaaaatccatcaaaattcaatttattaaacaatcattcgaaatttgaatgattttgaata 22746378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 40013718 - 40013827
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||| ||||||  ||| |||||||||||||||||    
T  40013718 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccattaaaatccaattgattaaacaatccttcga 40013807  T
Q  189 aatttgaataattttcaata 208  Q
    ||||||||| ||||| ||||    
T  40013808 aatttgaatgattttgaata 40013827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 152
Target Start/End: Original strand, 9220716 - 9220786
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaa 152  Q
    |||||||||||||| ||||||||| | ||||||||||||| || |||||||| |||| ||||||| |||||    
T  9220716 caatcctaagaaatatcatgttttcacgaaagactttttcgtgttaaaattttactataaaatcctacaaa 9220786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 37014094 - 37014037
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcc 146  Q
    |||||||||||| |||||||||||||||||||| || |||||||  |||| |||||||    
T  37014094 aagaaatctcatctttttatgaaagactttttcttgttaaaattatactacaaaatcc 37014037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 210
Target Start/End: Complemental strand, 37014044 - 37013993
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaatacc 210  Q
    |||||||  ||||||||||||| |||||||||||||||| ||||| ||||||    
T  37014044 caaaatccaatttattaaacaacccttcgaaatttgaatgattttgaatacc 37013993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 41881082 - 41881213
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41881082 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 41881181  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  41881182 ccttcgaaatttgaatgattttgaataccact 41881213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 25331337 - 25331206
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25331337 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 25331238  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||| ||||||||||| ||||| |||| ||||    
T  25331237 cctttgaaatttgaatgattttgaatatcact 25331206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 41321016 - 41320885
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41321016 caatcttaagaaatctcatgtttttatgaaagactttttcatactaaaatttcactagaacatcccacaaaatccatcaaaatctgatttattaaacaat 41320917  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  41320916 ccttcgaaatttgaatgattttgaataccact 41320885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 55303049 - 55302918
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  55303049 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaatatccatcaaaatctgatttattaaacaat 55302950  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  55302949 ccttcgaaatttgaatgattttgaataccact 55302918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 32950837 - 32950967
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  32950837 aatcttaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaatc 32950936  T
Q  183 cttcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||||| ||||| |||||||||    
T  32950937 cttcgaaatttgaatgattttgaataccact 32950967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 39479355 - 39479485
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39479355 caatcctaagaaatctcatgctttcatgaaagactttttcctgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 39479454  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
     ||||||||||||||| ||||| ||||||||    
T  39479455 tcttcgaaatttgaatgattttgaataccac 39479485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 12113151 - 12113022
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12113151 caatcccaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccattaaaatctgatttattaaacaat 12113052  T
Q  182 ccttcgaaatttgaataattttcaatacca 211  Q
    |||||||||||||||| ||||| |||||||    
T  12113051 ccttcgaaatttgaatgattttgaatacca 12113022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 1045013 - 1044882
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1045013 caattctaagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 1044914  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||||||| ||||||  |||| |||||||||    
T  1044913 ccttcgaaagttgaatggttttgaataccact 1044882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 34228583 - 34228714
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  34228583 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaaacaat 34228682  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | |||||||||| ||| ||||| |||||||||    
T  34228683 cattcgaaatttcaatgattttgaataccact 34228714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 37046450 - 37046582
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaattt-cactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 180  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  37046450 caatcctaagaaatctcatattttcatgaaagactttttcatgctaaaattttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaa 37046549  T
Q  181 tccttcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||||||| ||||| |||| ||||    
T  37046550 tccttcgaaatttgaatgattttaaatatcact 37046582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 1113099 - 1112968
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  1113099 caatcctaagaaatctcatgttttcatgaaagactttttcatgttaaaattttactaggaaatcccacaaaatccatcaaaatctgatttattaaacaat 1113000  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | || ||||||||||| ||||| |||||||||    
T  1112999 catttgaaatttgaatgattttgaataccact 1112968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 7007580 - 7007449
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7007580 caatcttaagaaatctcatgttttcatgaaaaaaattttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatctgatttattaaacaat 7007481  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  7007480 ccttcgaaatttgaatgattttgaataccact 7007449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 42786890 - 42786759
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  42786890 caatcataagaaatctcatgttttcatgaaagacttttttatgataaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaat 42786791  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  42786790 ccttcgaaatttgaatgattttgaataccact 42786759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 30009677 - 30009808
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30009677 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 30009776  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | ||  |||||| ||| ||||| |||||||||    
T  30009777 catttaaaatttaaatgattttgaataccact 30009808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 3436799 - 3436670
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||| ||||||| |||||| ||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  3436799 caattctaagaaatcttatgttttcatgaaaaactttttcatgttaaaatttcactacaaaatcccacaaaattcatcaaaatctgatttattaaacaat 3436700  T
Q  182 ccttcgaaatttgaataattttcaatacca 211  Q
    |||||||||||||||| ||||| |||||||    
T  3436699 ccttcgaaatttgaatgattttgaatacca 3436670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 112 - 213
Target Start/End: Original strand, 7249795 - 7249896
Alignment:
Q  112 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatacca 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  7249795 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 7249894  T
Q  212 ct 213  Q
    ||    
T  7249895 ct 7249896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 82 - 198
Target Start/End: Original strand, 24130981 - 24131098
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagacttttt-catgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 180  Q
    |||||||||||||||||||||||| |||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24130981 caatcctaagaaatctcatgttttcatgaaagatttttttcatcctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 24131080  T
Q  181 tccttcgaaatttgaata 198  Q
    || |||||||||||||||    
T  24131081 tcattcgaaatttgaata 24131098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 22202221 - 22202090
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  22202221 caatgctaagaaatctaatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaattttatttattaaacaat 22202122  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | || ||||||| ||| ||||| |||||||||    
T  22202121 cttttgaaattttaatgattttgaataccact 22202090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 19740933 - 19741038
Alignment:
Q  107 atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaa 206  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||    
T  19740933 atgaaagactttttcaagctaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgatttttaa 19741032  T
Q  207 taccac 212  Q
    ||||||    
T  19741033 taccac 19741038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 46635648 - 46635769
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      ||||| ||||||||||||||    
T  46635648 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatc------aatcttatttattaaacaat 46635741  T
Q  182 ccttcgaaatttgaataattttcaatac 209  Q
    |||||||||||||||| ||||| |||||    
T  46635742 ccttcgaaatttgaatgattttgaatac 46635769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 111 - 213
Target Start/End: Complemental strand, 25446227 - 25446125
Alignment:
Q  111 aagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatacc 210  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  25446227 aagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacc 25446128  T
Q  211 act 213  Q
    |||    
T  25446127 act 25446125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 112 - 213
Target Start/End: Complemental strand, 28541874 - 28541773
Alignment:
Q  112 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatacca 211  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||    
T  28541874 agactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatcattcgaaatttgaatgattttgaatacca 28541775  T
Q  212 ct 213  Q
    ||    
T  28541774 ct 28541773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 31314742 - 31314863
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||    
T  31314742 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccca----------caaaatctgatttattaaacaat 31314831  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  31314832 ccttcgaaatttgaatgattttgaataccact 31314863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 53276046 - 53275914
Alignment:
Q  82 caatcctaagaaatctcatgttttta-tgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 180  Q
    ||||||||| |||||| | ||||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||    
T  53276046 caatcctaaaaaatctaaagtttttaatgaaagactttttcatgctaaaattttattagaaaatctcacaaaatccatcaaaatctgatttattacacaa 53275947  T
Q  181 tccttcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||||||| ||||| |||| ||||    
T  53275946 tccttcgaaatttgaatgattttaaatatcact 53275914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 5441603 - 5441480
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  5441603 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 5441504  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  5441503 aatttgaatgattttgaataccac 5441480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 27768255 - 27768132
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  27768255 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 27768156  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  27768155 aatttgaatgattttgaataccac 27768132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 54341343 - 54341220
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  54341343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 54341244  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  54341243 aatttgaatgattttgaataccac 54341220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 27454078 - 27454209
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||| |||| | ||||||| ||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||| |||    
T  27454078 caatcttaacaaatattatgttttcatgaaagactttttcatgccaaaatttcactagaaaattccacaaaattcatcaaaatctgatttattaaataat 27454177  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | ||| |||||||||| ||||| |||||||||    
T  27454178 ctttcaaaatttgaatgattttgaataccact 27454209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 37828409 - 37828532
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| |  ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  37828409 aagaaatctcatcttttcatgaaagactttttctttttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 37828508  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  37828509 aatttgaatgattttgaataccac 37828532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 54853475 - 54853598
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  54853475 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54853574  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||||||||| ||||||||    
T  54853575 aatttgaataattttgaataccac 54853598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 32322290 - 32322167
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||| ||||| |  ||||||| ||||| |||||||||||||||||||||||||   |||||||||||||||||||||    
T  32322290 aagaaatctcatctttttatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 32322191  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  32322190 aatttgaatgattttgaataccac 32322167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 48261326 - 48261203
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  48261326 aagaaatctcatattttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 48261227  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  48261226 aatttgaatgattttgaataccac 48261203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 91 - 211
Target Start/End: Original strand, 44770862 - 44770982
Alignment:
Q  91 gaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaa 190  Q
    ||||||||||||  | ||||||||||||||| |  |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||    
T  44770862 gaaatctcatgtcgtcatgaaagactttttcttcttaaaatttcactagaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcaaaa 44770961  T
Q  191 tttgaataattttcaatacca 211  Q
    ||||||| ||||| |||||||    
T  44770962 tttgaatgattttgaatacca 44770982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 51321120 - 51320997
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| ||||| |||||  |||||||||||||||||||  |||||||||||||||||||||    
T  51321120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactataaaattacacaaaatccatcaaaatccaatttattaaacaatccttcga 51321021  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  51321020 aatttgaatgattttgaataccac 51320997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 40537161 - 40537280
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||          |||||||||||||||||||| ||||||||||||||||    
T  40537161 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca----------ccacaaaatccatcaaaatcagatttattaaacaatc 40537250  T
Q  183 cttcgaaatttgaataattttcaataccac 212  Q
     |||||||||| ||| ||||| ||||||||    
T  40537251 attcgaaatttaaatgattttgaataccac 40537280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 9163245 - 9163156
Alignment:
Q  119 ttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaata 208  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| ||||    
T  9163245 ttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatttaatttattaaacaatccttcgaaatttgaatgattttgaata 9163156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 37916023 - 37915903
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    |||||| || |||| ||||| ||||||||| || ||||| | ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  37916023 aaatcttatcttttcatgaatgactttttcttgttaaaagtacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 37915924  T
Q  192 ttgaataattttcaataccac 212  Q
    |||||| ||||| ||||||||    
T  37915923 ttgaatgattttgaataccac 37915903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 8712065 - 8711978
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 176  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||  |||||||||    
T  8712065 aagaaatctcatgttttgatgaaagactttttcttgctaaaatttcactataaaatcccacaaaatccatcaaaatccaatttattaa 8711978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 126 - 213
Target Start/End: Complemental strand, 23465117 - 23465030
Alignment:
Q  126 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccact 213  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||| |||||||||    
T  23465117 taaaatttaactagaaaatcccacaaaatccatcaaattctgatttattaaacaatccttcgaaatttgaatggttttgaataccact 23465030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 11090510 - 11090435
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 157  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  11090510 caatcctaagaaatctcatgtttttattaaagactttttaatgctaaaatttcactaaaaaatcccacaaaatcca 11090435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 25504696 - 25504771
Alignment:
Q  139 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccactg 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| |||||    
T  25504696 gaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatatcactg 25504771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 56445362 - 56445474
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||          ||||||||||||||| |||||    
T  56445362 aagaaatctcatgtctttatgaaagactttttcttgctaaagtttcactagaaaatcccacaaaatcca----------atttattaaacaatcattcga 56445451  T
Q  189 aatttgaataattttcaatacca 211  Q
    ||||||||| ||||| |||||||    
T  56445452 aatttgaatgattttgaatacca 56445474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 39307253 - 39307383
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| |||||||||||||||||||||| | | ||||||||||| ||||||||||||||||||||||||||||| ||||||||    ||| |||||| |||    
T  39307253 caattctaagaaatctcatgtttttatcagaaactttttcatgttaaaatttcactagaaaatcccacaaaattcatcaaaactcaattcattaaataat 39307352  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    | || ||||||||||| ||| | ||||||||    
T  39307353 ctttagaaatttgaatgattatgaataccac 39307383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 89 - 176
Target Start/End: Complemental strand, 24736534 - 24736447
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaa 176  Q
    ||||||||||||||||| ||||||||||| ||| || |||||||||||||||||||| |||||||||||||||||||  |||||||||    
T  24736534 aagaaatctcatgttttcatgaaagacttcttcttgttaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaa 24736447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 23987403 - 23987290
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||||||||||| |||||||||||||||||||||    
T  23987403 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatctaatttattaaacaatccttcga 23987314  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  23987313 aatttgaatgattttgaataccac 23987290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 12913413 - 12913301
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||||| || |||||| |||||||| || ||||||||||||||||||||||||||||||||          ||||||||||||||||||| |    
T  12913413 aagaaatctcatgtcttcatgaaatactttttcttgttaaaatttcactagaaaatcccacaaaatcca----------atttattaaacaatccttcaa 12913324  T
Q  189 aatttgaataattttcaatacca 211  Q
    ||||||||| ||||| |||||||    
T  12913323 aatttgaatgattttgaatacca 12913301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 36479249 - 36479361
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||||||||||| || |||||||||||  ||||||||||||||||           ||||||||||||||||  |||||||||| ||||||||||    
T  36479249 aagaaatctcatgttttcataaaagacttttttttgctaaaatttcacta-----------aaaatccatcaaaatccaatttattaaataatccttcga 36479337  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||||||||| ||||||||    
T  36479338 aatttgaataattttgaataccac 36479361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 41725321 - 41725205
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| ||||| ||||||||||||||| ||||||||||  ||   |||||||||||||| |    
T  41725321 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactataaaatcccacaaaattcatcaaaatccaat---ttaaacaatccttcaa 41725225  T
Q  189 aatttgaataattttcaata 208  Q
    ||||||||| ||||| ||||    
T  41725224 aatttgaatgattttgaata 41725205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 28371086 - 28371001
Alignment:
Q  126 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatacca 211  Q
    ||||||||||||||||||||||||||||| || ||||||   ||||||||||||||||||  |||||||||| ||||| |||||||    
T  28371086 taaaatttcactagaaaatcccacaaaattcaccaaaattcaatttattaaacaatcctttaaaatttgaatgattttgaatacca 28371001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 29649731 - 29649797
Alignment:
Q  146 ccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||| ||||||||    
T  29649731 ccacaaaatccatcaaaatccaatttattaaacaatctttcgaaatttgaatgattttgaataccac 29649797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 198
Target Start/End: Complemental strand, 20021495 - 20021423
Alignment:
Q  126 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaata 198  Q
    |||||||||| || ||||||||| |||||||| |||||||| ||||||||||||||||||  |||||||||||    
T  20021495 taaaatttcattaaaaaatcccataaaatccagcaaaatctaatttattaaacaatcctttaaaatttgaata 20021423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 30967316 - 30967429
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| |||||||| |||||| || ||||||| ||||| ||||||||||||||||||          |||||||||||||||||| ||    
T  30967316 aagaaatcttattttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatcctttga 30967405  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  30967406 aatttgaatgattttgaataccac 30967429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 88 - 197
Target Start/End: Original strand, 41581795 - 41581903
Alignment:
Q  88 taagaaatctcatgtttttatgaaagacttttt-catgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 186  Q
    |||||||||||||||||  |||||| | ||||| |||| |||||||||||||||||||||||||||||  |||  ||||  ||||||||||||||  |||    
T  41581795 taagaaatctcatgtttacatgaaatatttttttcatgttaaaatttcactagaaaatcccacaaaatatatc--aatccaatttattaaacaattattc 41581892  T
Q  187 gaaatttgaat 197  Q
     ||||||||||    
T  41581893 aaaatttgaat 41581903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 49501526 - 49501641
Alignment:
Q  89 aagaaatctcatgtttttat--gaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 186  Q
    |||||||||||| |||||||  ||||||||||||| || ||||||| ||||| ||||| ||||||||||||          ||||||||||||||| |||    
T  49501526 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49501615  T
Q  187 gaaatttgaataattttcaataccac 212  Q
    ||||||||||| ||||| ||| ||||    
T  49501616 gaaatttgaatgattttgaatgccac 49501641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 49507591 - 49507706
Alignment:
Q  89 aagaaatctcatgtttttat--gaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 186  Q
    |||||||||||| |||||||  ||||||||||||| || ||||||| ||||| ||||| ||||||||||||          ||||||||||||||| |||    
T  49507591 aagaaatctcatctttttatatgaaagactttttcttgttaaaattacactacaaaattccacaaaatcca----------atttattaaacaatcattc 49507680  T
Q  187 gaaatttgaataattttcaataccac 212  Q
    ||||||||||| ||||| ||| ||||    
T  49507681 gaaatttgaatgattttgaatgccac 49507706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 212
Target Start/End: Complemental strand, 28484093 - 28483975
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    |||| ||||||||||| | |||| ||||||||||||||| || |||| || ||||| ||||||| ||||||||||          |||||||||| ||||    
T  28484093 aatcttaagaaatctcgtcttttcatgaaagactttttcttgttaaa-ttacactacaaaatcctacaaaatcca----------atttattaaataatc 28484005  T
Q  183 cttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||| ||||| ||||||||    
T  28484004 cttcgaaatttgaatgattttgaataccac 28483975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 32684065 - 32684118
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  32684065 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 32684118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 49834890 - 49834943
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  49834890 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 49834943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 5800107 - 5800054
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||| ||||||||||| ||||| ||||||||    
T  5800107 caaaatccaatttattaaacaatcctttgaaatttgaatgattttgaataccac 5800054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 50018391 - 50018327
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||| |||||   ||||||||||||||||||| |||||||||| || || ||||||||    
T  50018391 acaaaatccattaaaattcaatttattaaacaatccttcaaaatttgaatgatcttgaataccac 50018327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 32684018 - 32684072
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcc 146  Q
    ||||||||| |||| ||||||||||||||| || ||||||| ||||| |||||||    
T  32684018 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 32684072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Original strand, 36727974 - 36728023
Alignment:
Q  107 atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcc 156  Q
    |||||||| |||||| || ||||||||||||| ||||||| |||||||||    
T  36727974 atgaaagattttttcttgttaaaatttcactaaaaaatcctacaaaatcc 36728023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 49834840 - 49834897
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcc 146  Q
    |||||||||||| |||| ||||||||||| ||| || ||||||| ||||| |||||||    
T  49834840 aagaaatctcatcttttaatgaaagacttcttcttgttaaaattacactacaaaatcc 49834897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 182
Target Start/End: Complemental strand, 12193227 - 12193135
Alignment:
Q  90 agaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||||||  |||||| ||| |||| ||||| ||||| ||| ||||||| | | |||||||||||||| ||||||   | |||||||||||||    
T  12193227 agaaatcttgtgttttaatgtaagatttttttatgctgaaaattcactaaatattcccacaaaatccaccaaaattcaacttattaaacaatc 12193135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 996086 - 996217
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  996086 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 996185  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  996186 ccttcgaaatttgaatgattttgaataccact 996217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 3999645 - 3999776
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3999645 caatcctaagaaatctcatgtttttatgaaagactttttcattctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 3999744  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  3999745 ccttcgaaatttgaatgattttgaataccact 3999776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 10139146 - 10139277
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10139146 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 10139245  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  10139246 ccttcgaaatttgaatgattttgaataccact 10139277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 20498415 - 20498284
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20498415 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 20498316  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  20498315 ccttcgaaatttgaatgattttgaataccact 20498284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 33807798 - 33807929
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807798 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 33807897  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  33807898 ccttcgaaatttgaatgattttgaataccact 33807929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 19254033 - 19253902
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19254033 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 19253934  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  19253933 ccttcgaaatttgaatgattttgaataccact 19253902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 37820477 - 37820608
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37820477 caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactggaaaatcccacaaaatccatcaaaatctgatttattaaacaat 37820576  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  37820577 ccttcgaaatttgaatgattttgaataccact 37820608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 54625798 - 54625667
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54625798 caatcttaagaaatctcatgttttcatgaaaaactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 54625699  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||||||||| |||||||||    
T  54625698 ccttcgaaatttgaataattttgaataccact 54625667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 3206205 - 3206336
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3206205 caatcataagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 3206304  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  3206305 ccttcgaaatttgaatgattttgaataccact 3206336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 6589770 - 6589639
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6589770 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaataat 6589671  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
     ||||||||||||||| ||||| |||||||||    
T  6589670 tcttcgaaatttgaatgattttgaataccact 6589639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 29448858 - 29448989
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  29448858 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 29448957  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  29448958 ccttcgaaatttgaatgattttgaataccact 29448989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 88 - 214
Target Start/End: Original strand, 33996547 - 33996673
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33996547 taagaaatctcatgtttttataaaagactttttcatgctaaaatttcactagaaaatccctcaaaatccatcaaaatctgatttattaaacaatccttcg 33996646  T
Q  188 aaatttgaataattttcaataccactg 214  Q
    |||||||||| ||||| ||||||||||    
T  33996647 aaatttgaatgattttgaataccactg 33996673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 44762037 - 44762168
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44762037 caatcttaagaaatctcatgttttcataaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44762136  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||||||| |||||||||||| |||||||||    
T  44762137 ccttcgaaacttgaataattttaaataccact 44762168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 40247050 - 40246919
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40247050 caatcataaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 40246951  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||| |||||||||| ||||| |||||||||    
T  40246950 ccttccaaatttgaatgattttgaataccact 40246919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 35337939 - 35337810
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35337939 caatcctaa-aaatctcatgttttcatgaaa-actttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 35337842  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||||||  |||| |||||||||    
T  35337841 ccttcgaaatttgaatttttttgaataccact 35337810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 6035053 - 6035179
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |    
T  6035053 caatcttaagaaatctcatgtttttatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctaatttattaaacatt 6035152  T
Q  182 ccttcgaaatttgaataattttcaata 208  Q
     ||||||||||||||| ||||| ||||    
T  6035153 gcttcgaaatttgaatgattttgaata 6035179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 82 - 210
Target Start/End: Complemental strand, 25418572 - 25418444
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||| ||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25418572 caatcctaaggaatctcatgttttcatgaaatactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 25418473  T
Q  182 ccttcgaaatttgaataattttcaatacc 210  Q
    ||||  |||||||||| ||||| ||||||    
T  25418472 cctttcaaatttgaatgattttgaatacc 25418444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 83 - 213
Target Start/End: Complemental strand, 52114734 - 52114604
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||||||||||||||||||||| |  ||||| |||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||    
T  52114734 aatcctaagaaatctcatgttttcacaaaagattttttcatgctaaaattttactagaaaattccacaaaatctatcaaaatctgatttattaaacaatc 52114635  T
Q  183 cttcgaaatttgaataattttcaataccact 213  Q
    || |||||||||||| ||||| |||||||||    
T  52114634 ctgcgaaatttgaattattttgaataccact 52114604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 53929128 - 53929259
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  53929128 caatcctaaaaaatctcatgttttcattaaagattttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatcttatttattaaacaat 53929227  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | ||||| |||| ||| ||||| |||||||||    
T  53929228 cgttcgatatttaaatgattttgaataccact 53929259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 5825268 - 5825139
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||| |||||||||| |||||||||||||||| |||||||||  ||||||||||||||    
T  5825268 caatcataagaaatctcatgttttcatgaaagcctttttcatgctagaatttcactaaaaaatcccacaaaatctatcaaaatccaatttattaaacaat 5825169  T
Q  182 ccttcgaaatttgaataattttcaatacca 211  Q
    ||||| |||||||||| ||||| |||||||    
T  5825168 ccttcaaaatttgaatgattttgaatacca 5825139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 170
Target Start/End: Original strand, 6131233 - 6131321
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 170  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6131233 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatt 6131321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 97 - 213
Target Start/End: Original strand, 51699495 - 51699611
Alignment:
Q  97 tcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaa 196  Q
    ||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  51699495 tcatgttttcacgaaagattttttcatgctaaaatttcactagaaaatcccacaaaattcatcaaaatcttatttattaaccaatccttcgaaatttgaa 51699594  T
Q  197 taattttcaataccact 213  Q
    | ||||| |||||||||    
T  51699595 tgattttgaataccact 51699611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 18749811 - 18749688
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  18749811 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 18749712  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  18749711 aatttgaatgattttgaataccac 18749688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 54629043 - 54628920
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  54629043 aagaaatctcatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 54628944  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  54628943 aatttgaatgattttgaataccac 54628920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 40897343 - 40897221
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  40897343 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 40897244  T
Q  189 aatttgaataattttcaatacca 211  Q
    ||||||||| ||||| |||||||    
T  40897243 aatttgaatgattttgaatacca 40897221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 22057933 - 22057837
Alignment:
Q  117 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccact 213  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  22057933 ttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccatcgaaatttgaatgattttaaataccact 22057837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 26107460 - 26107337
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| ||||||||||| |||||||| || ||||||| ||||| |||||| |||||||||||||||||||  |||||||||||||||||||||    
T  26107460 aagaaatctcatctttttatgaaatactttttcttgttaaaattacactacaaaatcacacaaaatccatcaaaatccaatttattaaacaatccttcga 26107361  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  26107360 aatttgaatgattttgaataccac 26107337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 32580375 - 32580252
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||||||  |||||||||||||||||||||    
T  32580375 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatccctcaaaatccatcaaaatccaatttattaaacaatccttcga 32580276  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  32580275 aatttgaatgattttgaataccac 32580252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 34484037 - 34484160
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34484037 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 34484136  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  34484137 aatttgaatgattttgaataccac 34484160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 36674137 - 36674260
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |    
T  36674137 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 36674236  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  36674237 aatttgaatgattttgaataccac 36674260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 1439894 - 1440005
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| ||||||||||||||  |||||||||||||||| | ||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||    
T  1439894 caatcctaaaaaatctcatgttttcgtgaaagactttttcataccaaaattttactagaaaatcccacaaaatctatcaaaatctaatttattaaacaat 1439993  T
Q  182 ccttcgaaattt 193  Q
    ||||| ||||||    
T  1439994 ccttccaaattt 1440005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 11431725 - 11431602
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| |||||||||||||||||| |||||||  |||||||||||||||||||||    
T  11431725 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccaccaaaatccaatttattaaacaatccttcga 11431626  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||| ||| ||||| ||||||||    
T  11431625 aatttaaatgattttgaataccac 11431602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 208
Target Start/End: Complemental strand, 17946487 - 17946368
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  17946487 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 17946388  T
Q  189 aatttgaataattttcaata 208  Q
    ||||||||| ||||| ||||    
T  17946387 aatttgaatgattttgaata 17946368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 44906520 - 44906643
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||| ||||| || ||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  44906520 aagaaatctcatcttttcatgaaagacattttcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 44906619  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  44906620 aatttgaatgattttgaataccac 44906643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 102 - 212
Target Start/End: Original strand, 51737746 - 51737856
Alignment:
Q  102 tttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataatt 201  Q
    |||||||||||||||||||| || ||||||| ||| | ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||    
T  51737746 tttttatgaaagactttttcttgttaaaattacacaacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgatt 51737845  T
Q  202 ttcaataccac 212  Q
    || ||||||||    
T  51737846 ttgaataccac 51737856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 27899540 - 27899420
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |          |||||||||||||||||||||||    
T  27899540 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatccta----------caaaatctgatttattaaacaat 27899451  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    |||||||||||||||| ||||| ||||||||    
T  27899450 ccttcgaaatttgaatgattttgaataccac 27899420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 29030203 - 29030081
Alignment:
Q  90 agaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaa 189  Q
    |||||||||||||||| || ||| |    |||||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  29030203 agaaatctcatgttttcataaaaaaaaaattcatgttaaaatttcattagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcaaa 29030104  T
Q  190 atttgaataattttcaataccac 212  Q
    |||||||| ||||| ||||||||    
T  29030103 atttgaatgattttgaataccac 29030081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 31646293 - 31646414
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||||||  ||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||| ||||||||||| |||||    
T  31646293 aagaaatctcat--tttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattcattaaacaatctttcga 31646390  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  31646391 aatttgaatgattttgaataccac 31646414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 52617978 - 52618095
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||| ||      |||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  52617978 aagaaatctcatctttttatgaaagacttgtt------aaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 52618071  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  52618072 aatttgaatgattttgaataccac 52618095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 48379356 - 48379233
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| ||||||||| ||||| |  ||||||| ||||| |||||||||||||||||||||||||   |||||||||||||||||||||    
T  48379356 aagaaatctgatcttttcatgaaagacattttcttattaaaattacactacaaaatcccacaaaatccatcaaaattcaatttattaaacaatccttcga 48379257  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  48379256 aatttgaatgattttgaataccac 48379233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 50903247 - 50903370
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| || ||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||      
T  50903247 aagaaatctcatattttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttctt 50903346  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  50903347 aatttgaatgattttgaataccac 50903370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 52810577 - 52810454
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| |||||| || ||||||| | ||| |||||||||||||||||||||||||   ||||||||||||||| ||| |    
T  52810577 aagaaatctcatcttttcatgaaagattttttcttgttaaaattacgctacaaaatcccacaaaatccatcaaaattcaatttattaaacaatcattcaa 52810478  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  52810477 aatttgaatgattttgaataccac 52810454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 1440006 - 1440083
Alignment:
Q  136 ctagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||    
T  1440006 ctagaaaatcccataaaatccatcaaaatctgatttattaaacaatccttggaaatttgaatgattttgaataccact 1440083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 20833187 - 20833068
Alignment:
Q  93 aatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatt 192  Q
    ||||| || |||| |||||| |||||||| || ||||||| |||||  ||||| |||||||||||||||||||  |||||||||||||||||||  ||||    
T  20833187 aatcttatcttttcatgaaatactttttcttgttaaaattacactaataaatctcacaaaatccatcaaaatccaatttattaaacaatccttccgaatt 20833088  T
Q  193 tgaataattttcaataccac 212  Q
    ||||| ||||| ||||||||    
T  20833087 tgaatgattttgaataccac 20833068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 114 - 208
Target Start/End: Complemental strand, 55235359 - 55235264
Alignment:
Q  114 actttttcatgctaaaatttcactagaaaatcccacaaaa-tccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaata 208  Q
    ||||||| |||||||||||||| ||||||||||||||||| |||||||||| |  ||||||||||||||| |||||||||||||| ||||| ||||    
T  55235359 acttttttatgctaaaatttcattagaaaatcccacaaaaatccatcaaaaaccaatttattaaacaatctttcgaaatttgaatgattttgaata 55235264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 52080117 - 52080002
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |      |||||||||||||||||||||| |||||||||||||||||||          ||||||||||||||||    
T  52080117 caatcctaagaaatctcatgttttca------actttttcatgctaaaatttcattagaaaatcccacaaaatc----------tgatttattaaacaat 52080034  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||| |||||||||| ||||| |||||||||    
T  52080033 ccttcaaaatttgaatgattttgaataccact 52080002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 33807680 - 33807733
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttca 135  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33807680 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttca 33807733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 10660675 - 10660611
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  10660675 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 10660611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 10728658 - 10728771
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||||||||||  ||||||||||||||||||| |    
T  10728658 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatccttcca 10728747  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  10728748 aatttgaatgattttaaataccac 10728771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 39038229 - 39038116
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||| ||||||    
T  39038229 aagaaatctcatctttttatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaattcttcga 39038140  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| |||||  |||||||    
T  39038139 aatttgaatgattttggataccac 39038116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 157
Target Start/End: Complemental strand, 44276580 - 44276506
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 157  Q
    ||||| || ||||||||||| || |||||||| |||||| || ||||||||||||||||||||||||||||||||    
T  44276580 aatcccaaaaaatctcatgtcttcatgaaagattttttcttgttaaaatttcactagaaaatcccacaaaatcca 44276506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 37455050 - 37454937
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| ||||| ||||||||||||||| ||          ||||||||||||||| |||||    
T  37455050 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaattca----------atttattaaacaatcattcga 37454961  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  37454960 aatttgaatgattttgaataccac 37454937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 39842494 - 39842610
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| |||||||||||| |||| ||||||||||||||| || ||||||| || ||          |||||||| ||||||||| ||||||||||||||    
T  39842494 caatcccaagaaatctcatcttttcatgaaagactttttcttgttaaaattacatta----------caaaatccgtcaaaatctaatttattaaacaat 39842583  T
Q  182 ccttcgaaatttgaataattttcaata 208  Q
     ||||||||||||||| ||||| ||||    
T  39842584 tcttcgaaatttgaatgattttgaata 39842610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 50762067 - 50762180
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||          ||||||||||||||||||  |||||| |||||||| |||||    
T  50762067 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacact----------acaaaatccatcaaaatccaatttatcaaacaatcattcga 50762156  T
Q  189 aatttgaataattttcaataccac 212  Q
    |||| |||| ||||| ||||||||    
T  50762157 aattagaatgattttgaataccac 50762180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 539476 - 539534
Alignment:
Q  154 tccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||  |||||||||| ||||||||||||||||||| ||||| ||||||||    
T  539476 tccatcaaaatccaatttattaaataatccttcgaaatttgaatgattttgaataccac 539534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 6975924 - 6975867
Alignment:
Q  100 tgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 157  Q
    |||||| |||||||||| ||||||||| |||||| |||||||||||||||||| ||||    
T  6975924 tgttttcatgaaagactgtttcatgctcaaattttactagaaaatcccacaaattcca 6975867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 23753463 - 23753516
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  23753463 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 23753516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 45863040 - 45862983
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcc 146  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| |||||||    
T  45863040 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 45862983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 157
Target Start/End: Original strand, 15492874 - 15492942
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 157  Q
    ||||||||| |||  || |||||||| |||||| || |||||||||||||||| |||| ||||||||||    
T  15492874 aagaaatcttatgacttcatgaaagattttttcttgttaaaatttcactagaatatcctacaaaatcca 15492942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 90 - 145
Target Start/End: Complemental strand, 12103789 - 12103733
Alignment:
Q  90 agaaatctca-tgtttttatgaaagactttttcatgctaaaatttcactagaaaatc 145  Q
    |||||||||| ||| || ||||||||||| ||| || ||||||||||||||||||||    
T  12103789 agaaatctcaatgtcttcatgaaagacttattcttgttaaaatttcactagaaaatc 12103733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 120; Significance: 2e-61; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 24776563 - 24776432
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24776563 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 24776464  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  24776463 ccttcgaaatttgaatgattttgaataccact 24776432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 14198579 - 14198711
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14198579 caatcctaagaaatctcatgttttcatgaaagaatttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 14198678  T
Q  182 ccttcgaaatttgaataattttcaataccactg 214  Q
    |||||||||||||||| ||||| ||||||||||    
T  14198679 ccttcgaaatttgaatgattttgaataccactg 14198711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 16269899 - 16269768
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  16269899 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaaacaat 16269800  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  16269799 ccttcgaaatttgaatgattttgaataccact 16269768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 20605444 - 20605313
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20605444 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 20605345  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||| ||| ||||| |||||||||    
T  20605344 ccttcgaaattttaatgattttgaataccact 20605313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 31170626 - 31170757
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31170626 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 31170725  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||| ||||||||||| ||||| |||||||||    
T  31170726 ccttggaaatttgaatgattttgaataccact 31170757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 209
Target Start/End: Original strand, 5093049 - 5093176
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5093049 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 5093148  T
Q  182 ccttcgaaatttgaataattttcaatac 209  Q
    ||||| |||||||||| ||||| |||||    
T  5093149 ccttcaaaatttgaatgattttgaatac 5093176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 12407588 - 12407457
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12407588 caatcttaagaaatctcatgttttcatgaaagactttttcatggtaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 12407489  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||| |||||||||| ||||| |||||||||    
T  12407488 ccttcaaaatttgaatgattttgaataccact 12407457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 32125455 - 32125330
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32125455 taagaaatctcatattttcatgaaagactttttcatgctaaaattttactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 32125356  T
Q  188 aaatttgaataattttcaataccact 213  Q
    |||||||||| ||||| |||||||||    
T  32125355 aaatttgaatgattttgaataccact 32125330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 35317264 - 35317139
Alignment:
Q  88 taagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcg 187  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  35317264 taagaaatcttatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaatccttcg 35317165  T
Q  188 aaatttgaataattttcaataccact 213  Q
    |||||||||| ||||| |||||||||    
T  35317164 aaatttgaatgattttgaataccact 35317139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 43847854 - 43847727
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  43847854 caatcctaagaaatctcatgttttcatgacagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaattctgatttattaaacaat 43847755  T
Q  182 ccttcgaaatttgaataattttcaatac 209  Q
    |||||||||||||||| ||||| |||||    
T  43847754 ccttcgaaatttgaatgattttgaatac 43847727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 305467 - 305598
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  305467 caatcctaagaaatctcatgttttcatgaaagactttttcattctaaaatttcactagaaaatctcacaaaatccatcgaaatctgatttattaaacaat 305566  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | ||| |||||||||| ||||| |||||||||    
T  305567 cattcaaaatttgaatgattttgaataccact 305598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 22551765 - 22551896
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||    
T  22551765 caatcataagaaatctcatgttttcatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttaataaacaat 22551864  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | |||||||||||||||||||| |||||||||    
T  22551865 cattcgaaatttgaataattttgaataccact 22551896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 102 - 213
Target Start/End: Complemental strand, 1789630 - 1789519
Alignment:
Q  102 tttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataatt 201  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  1789630 ttttgatgaaagactttttcatgctaaaatttcattagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgatt 1789531  T
Q  202 ttcaataccact 213  Q
    || |||||||||    
T  1789530 ttgaataccact 1789519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 9120334 - 9120203
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9120334 caatcctaagaaatctcatgttttcatgaaagatttttccatactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaat 9120235  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||  |||| ||||| ||||| |||| ||||    
T  9120234 cctttaaaatctgaatgattttgaatatcact 9120203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 28844756 - 28844633
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| |  ||||||| ||||| ||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  28844756 aagaaatctcatctttttatgaaagactttttcttattaaaattacactacaaaattccacaaaatccatcaaaatctaatttattaaacaatccttcga 28844657  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  28844656 aatttgaatgattttgaataccac 28844633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 33135823 - 33135701
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  33135823 aagaaatctcat-tttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 33135725  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  33135724 aatttgaatgattttgaataccac 33135701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 18177468 - 18177345
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| ||||||| |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  18177468 aagaaatctcatctttttattaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcga 18177369  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  18177368 aatttgaatgattttgaataccac 18177345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 44765974 - 44765852
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||         ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  44765974 caatcctaagaaatctcatgttttcatgaaa---------atgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 44765884  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | |||||||||||||| ||||| |||||||||    
T  44765883 ctttcgaaatttgaatgattttgaataccact 44765852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 43078764 - 43078656
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || ||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||  ||||||||||||||| |||||    
T  43078764 aagaaatcttatctttttatgaaagactttttcatgttaaaattacactataaaatcccacaaaatccatgaaaatccaatttattaaacaatcattcga 43078665  T
Q  189 aatttgaat 197  Q
    |||||||||    
T  43078664 aatttgaat 43078656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 10657607 - 10657484
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||| |||| |||| |||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  10657607 aagaaatttcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 10657508  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  10657507 aatttgaatgattttgaataccac 10657484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 25288360 - 25288237
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||| || || || ||||||| ||||| ||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  25288360 aagaaatctcatcttttcatgaaagacgttctcttgttaaaattacactacaaaatcccacaaaattcatcaaaatccaatttattaaacaatccttcga 25288261  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  25288260 aatttgaatgattttgaataccac 25288237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 105 - 212
Target Start/End: Complemental strand, 26788971 - 26788864
Alignment:
Q  105 ttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttc 204  Q
    ||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||| |||||     
T  26788971 ttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttg 26788872  T
Q  205 aataccac 212  Q
    ||||||||    
T  26788871 aataccac 26788864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 28740302 - 28740415
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| || ||||||| |||          |||||||||||||||||||  |||||||||||||||||||||    
T  28740302 aagaaatctcatctttttatgaaagactttttcttgttaaaattacac----------cacaaaatccatcaaaatccaatttattaaacaatccttcga 28740391  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  28740392 aatttgaatgattttgaataccac 28740415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 10125302 - 10125418
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||| |||||||||||||||||||||| || ||||||||||||| ||||||||||||||| ||          ||||||||||||||    
T  10125302 caatcttaagaaatctcgtgtttttatgaaagactttttcttgttaaaatttcactaaaaaatcccacaaaattca----------atttattaaacaat 10125391  T
Q  182 ccttcgaaatttgaataattttcaata 208  Q
    |||| ||||||||||| ||||| ||||    
T  10125392 cctttgaaatttgaatgattttgaata 10125418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 7026746 - 7026682
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  7026746 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 7026682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 89 - 211
Target Start/End: Original strand, 13833441 - 13833553
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| || | ||||||||||||||| || ||||||| ||||| ||||||||||||||||||          ||||||||||||||||||| |    
T  13833441 aagaaatctcatcttgtcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca----------atttattaaacaatccttcaa 13833530  T
Q  189 aatttgaataattttcaatacca 211  Q
    ||||||||| ||||| |||||||    
T  13833531 aatttgaatgattttgaatacca 13833553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 3463863 - 3463750
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||| ||    
T  3463863 aagaaatctcatattttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 3463774  T
Q  189 aatttgaataattttcaataccac 212  Q
    || |||||| ||||| ||||||||    
T  3463773 aaattgaatgattttaaataccac 3463750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 379079 - 379016
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatacca 211  Q
    |||||||| |||||||||  ||||||||||||||||||| |||||||||| ||||| |||||||    
T  379079 acaaaatctatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaatacca 379016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 26601270 - 26601332
Alignment:
Q  150 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||||||| | |||||||||||||| ||||| ||||||||    
T  26601270 aaaatcccacaaaatctgatttattaaacaaacattcgaaatttgaatgattttgaataccac 26601332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 6224626 - 6224679
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||| ||||||||||||||||||||||||| ||||||||    
T  6224626 caaaatccaatttattaaataatccttcgaaatttgaataattttgaataccac 6224679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 208
Target Start/End: Complemental strand, 3574978 - 3574929
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaata 208  Q
    |||||||  |||||||||||||||||||||||||||||| ||||| ||||    
T  3574978 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaata 3574929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 6224576 - 6224633
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcc 146  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| |||||||    
T  6224576 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 6224633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 119; Significance: 6e-61; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 43581090 - 43581220
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43581090 aatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 43581189  T
Q  183 cttcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||||| ||||| |||||||||    
T  43581190 cttcgaaatttgaatgattttgaataccact 43581220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 34695481 - 34695349
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34695481 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 34695382  T
Q  182 ccttcgaaatttgaataattttcaataccactg 214  Q
    ||||||||||||||||  |||| ||||||||||    
T  34695381 ccttcgaaatttgaatggttttgaataccactg 34695349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 973392 - 973261
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  973392 caatcctaagaaatctcatgttttcatgaaagactttttcttgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 973293  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  973292 ccttcgaaatttgaatgattttgaataccact 973261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 7718361 - 7718492
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7718361 caatcctaagaaatctcatgttttcatgaaagattttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7718460  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  7718461 ccttcgaaatttgaatgattttgaataccact 7718492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 7719259 - 7719390
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7719259 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 7719358  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | |||||||||||||| ||||| |||||||||    
T  7719359 cattcgaaatttgaatgattttgaataccact 7719390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 40996648 - 40996779
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40996648 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcctacaaaatccatcaaaatctgatttattaaacaat 40996747  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  40996748 ccttcgaaatttgaatgattttgaataccact 40996779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 44343395 - 44343526
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44343395 caatcctaagaaatctcatgttttcgtgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 44343494  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  44343495 ccttcgaaatttgaatgattttaaataccact 44343526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 18914734 - 18914865
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  18914734 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaaa 18914833  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||| ||||||||||| ||||| |||||||||    
T  18914834 cctttgaaatttgaatgattttgaataccact 18914865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 30441004 - 30440873
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30441004 caatcctaagaaatctcatgttttcacgaaagactttttcatactaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 30440905  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  30440904 ccttcgaaatttgaatgattttgaataccact 30440873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 32142916 - 32143046
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32142916 caatcttaagaaatctcatgtttttatggaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 32143015  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    ||||| |||||||||| ||||| ||||||||    
T  32143016 ccttcaaaatttgaatgattttgaataccac 32143046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 12893616 - 12893487
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  12893616 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaat 12893517  T
Q  182 ccttcgaaatttgaataattttcaatacca 211  Q
     ||||||||||||||| ||||| |||||||    
T  12893516 tcttcgaaatttgaatgattttgaatacca 12893487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 47914474 - 47914343
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  47914474 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatcttatttattaaacaat 47914375  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||| ||||    
T  47914374 ccttcgaaatttgaatgattttgaatatcact 47914343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 82 - 211
Target Start/End: Original strand, 39219376 - 39219504
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39219376 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 39219475  T
Q  182 ccttcgaaatttgaataattttcaatacca 211  Q
     | || |||||||||| ||||| |||||||    
T  39219476 -catcaaaatttgaatgattttgaatacca 39219504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 10068668 - 10068538
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||    
T  10068668 caatcctaacaaatctcatgtttttatgaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatttaatttattaaacaat 10068569  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    ||||| |||||||||| ||||| ||||||||    
T  10068568 ccttcaaaatttgaatgattttgaataccac 10068538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 82 - 211
Target Start/End: Original strand, 20275262 - 20275391
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||||||| ||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  20275262 caatgctaagaaatctcatgctttcatgacagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatctgatttattaaacaat 20275361  T
Q  182 ccttcgaaatttgaataattttcaatacca 211  Q
    |||||||||||||||| ||||| |||||||    
T  20275362 ccttcgaaatttgaatgattttgaatacca 20275391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 82 - 214
Target Start/End: Complemental strand, 7113660 - 7113528
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||||    
T  7113660 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaattttcctagaaaatcccacaaaatctatcaaaatctgatttattaaacaat 7113561  T
Q  182 ccttcgaaatttgaataattttcaataccactg 214  Q
    ||| |||||||||||| ||||| ||||||||||    
T  7113560 cctgcgaaatttgaattattttgaataccactg 7113528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 34009221 - 34009090
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||  ||||||||||||| |||||||||||| | |||||||| ||||||||||||||||||||||||||||||||||||    
T  34009221 caatcctaagaaatctcatgttttcttgaaagacttttttatgctaaaattttattagaaaattccacaaaatccatcaaaatctgatttattaaacaat 34009122  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  34009121 ccttcgaaatttgaatgattttgaataccact 34009090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 47879376 - 47879245
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  47879376 caatcttaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaattccacaaaatccatcaaaatctgatttattaaacaat 47879277  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||  |||||||||| ||||| |||| ||||    
T  47879276 ccttttaaatttgaatgattttgaatatcact 47879245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 43679592 - 43679490
Alignment:
Q  112 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatacca 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  43679592 agactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaatacca 43679493  T
Q  212 ctg 214  Q
    |||    
T  43679492 ctg 43679490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 23101492 - 23101369
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  23101492 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 23101393  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  23101392 aatttgaatgattttgaataccac 23101369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 28342541 - 28342418
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  28342541 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28342442  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  28342441 aatttgaatgattttgaataccac 28342418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 3023120 - 3022997
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  3023120 aagaaatctcatcttttcatgaaaaactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 3023021  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  3023020 aatttgaatgattttgaataccac 3022997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 28034811 - 28034934
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||  || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  28034811 aagaaatctcatcttttcatgaaagacttttttttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 28034910  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||||||||| ||||||||    
T  28034911 aatttgaataattttgaataccac 28034934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 208
Target Start/End: Original strand, 29614770 - 29614889
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29614770 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29614869  T
Q  189 aatttgaataattttcaata 208  Q
    ||||||||| ||||| ||||    
T  29614870 aatttgaatgattttgaata 29614889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 39784293 - 39784170
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  39784293 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 39784194  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||| ||| ||||| ||||||||    
T  39784193 aatttaaatgattttgaataccac 39784170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 110 - 212
Target Start/End: Complemental strand, 12963874 - 12963772
Alignment:
Q  110 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatac 209  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||  ||||    
T  12963874 aaagactttttcttactaaaatttcactagaaaatcccacaaaatccatcaaaatctaatttattaaacaatccttcgaaatttgaatgattttggatac 12963775  T
Q  210 cac 212  Q
    |||    
T  12963774 cac 12963772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 9882243 - 9882365
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||| |  ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  9882243 aagaaatctcat-tttttatgaaagactttttcttcttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 9882341  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  9882342 aatttgaatgattttgaataccac 9882365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 18838583 - 18838460
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  18838583 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatctttcga 18838484  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  18838483 aatttgaatgattttgaataccac 18838460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 12740573 - 12740444
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||| ||||||||||||||||| || || ||||||| ||||| |||||||||||||||| |||||||||  ||||||||||||||    
T  12740573 caatcttaagaaatctcatctttttatgaaagactttctcttgttaaaattacactataaaatcccacaaaatctatcaaaatc-catttattaaacaat 12740475  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    |||| ||||||||||| ||||| ||||||||    
T  12740474 cctttgaaatttgaatgattttgaataccac 12740444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 82 - 211
Target Start/End: Original strand, 43187356 - 43187485
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| || ||||||||||| || ||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||||    
T  43187356 caatcccaaaaaatctcatgtcttcatgaaagactttttcttgttaaaatttcactagaaaatccgacaaaattcatcaaaatccaatttattaaacaat 43187455  T
Q  182 ccttcgaaatttgaataattttcaatacca 211  Q
     |||| |||||||||| ||||| |||||||    
T  43187456 gcttcaaaatttgaatgattttgaatacca 43187485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 92 - 211
Target Start/End: Complemental strand, 33382828 - 33382709
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| || |||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  33382828 aaatctcatcttttcataaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 33382729  T
Q  192 ttgaataattttcaatacca 211  Q
    || ||| ||||| |||||||    
T  33382728 ttaaatgattttgaatacca 33382709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 7993336 - 7993214
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| ||||||||||||||| || ||||||| ||||| ||||||||||| |||||||||||||   |||||||||||||||||||||    
T  7993336 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacacaatccatcaaaattcaatttattaaacaatccttcga 7993237  T
Q  189 aatttgaataattttcaatacca 211  Q
    ||||||||| ||||| |||||||    
T  7993236 aatttgaatgattttgaatacca 7993214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 8675527 - 8675404
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| || ||||| |||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  8675527 aagaaatctcatcttttcataaaagattttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 8675428  T
Q  189 aatttgaataattttcaataccac 212  Q
    | ||| ||| ||||| ||||||||    
T  8675427 agtttaaatgattttgaataccac 8675404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 89 - 198
Target Start/End: Original strand, 37972873 - 37972982
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||| |||||| |||| ||||||||||||||| || ||||||| ||||| |||||||| |||||||||||||||||  |||||||||| ||||||||||    
T  37972873 aagaagtctcatcttttcatgaaagactttttcttgttaaaattacactataaaatcccgcaaaatccatcaaaatccaatttattaaataatccttcga 37972972  T
Q  189 aatttgaata 198  Q
    ||||||||||    
T  37972973 aatttgaata 37972982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 9180071 - 9179996
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 157  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  9180071 caatcctaagaaatctcatgttttcatgaaagacttttttatgctaaaaattcactagaaaatcccacaaaatcca 9179996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 113 - 212
Target Start/End: Complemental strand, 25805862 - 25805763
Alignment:
Q  113 gactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||| |||   ||||||||||||||||| |||||||||||| ||||| ||||||||    
T  25805862 gactttttcatgctaaaattttattagaaaatcccacaaaatccatcataattcaatttattaaacaatcctacgaaatttgaatgattttgaataccac 25805763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 89 - 198
Target Start/End: Complemental strand, 41827498 - 41827389
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||| ||||| || ||||||| ||||| | ||||||||||||||||||||||||  ||||||||||||||||||| |    
T  41827498 aagaaatctcatattttcatgaaagacattttcttgttaaaattacactacacaatcccacaaaatccatcaaaatccaatttattaaacaatccttcaa 41827399  T
Q  189 aatttgaata 198  Q
    | ||||||||    
T  41827398 attttgaata 41827389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 727692 - 727594
Alignment:
Q  101 gtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataat 200  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||| ||||||||||| ||    
T  727692 gttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaa----------aatctgatttattaaacaatcctttgaaatttgaatgat 727603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 44256775 - 44256895
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| |||||| |||||||| || ||||||| ||||  ||||||| ||||||| |||| |||||  ||||||||||||||| ||||||||    
T  44256775 aaatctcatattttgatgaaaaactttttcttgttaaaattacactgcaaaatccaacaaaattcatccaaatccaatttattaaacaatcattcgaaat 44256874  T
Q  192 ttgaataattttcaataccac 212  Q
    |||||| ||||| ||||||||    
T  44256875 ttgaatgattttgaataccac 44256895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 31639015 - 31638952
Alignment:
Q  150 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  31639015 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaatgattttgaataccact 31638952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 3797066 - 3797186
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||    
T  3797066 caatcctaagaaatct-atgttttcttaaaagactttttcatgctaaaatttcactagaaaatc---------ccatcaaaatctaatttattaaacaat 3797155  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    ||||| |||||| ||| || || ||||||||    
T  3797156 ccttcaaaattttaatgatcttgaataccac 3797186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 19810983 - 19810915
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 157  Q
    ||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||| ||||||||||||    
T  19810983 aagaaatctcatgttttcatgaaagacatttttatgctaaaatttcactagaaaattccacaaaatcca 19810915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 10676463 - 10676546
Alignment:
Q  126 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatac 209  Q
    ||||||||||| ||||||| ||| |||||||||| |||||  |||||||||||||||||||||||||||||| ||||| |||||    
T  10676463 taaaatttcacaagaaaattccataaaatccatccaaatccaatttattaaacaatccttcgaaatttgaatgattttgaatac 10676546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 117 - 212
Target Start/End: Complemental strand, 32883948 - 32883853
Alignment:
Q  117 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||| || ||||||| ||||| |||||||||| |||||||||||||||  ||||| ||||||||| |||||||||||||| ||||| ||||||||    
T  32883948 ttttcttgttaaaattacactacaaaatcccacgaaatccatcaaaatccaatttaataaacaatcattcgaaatttgaatgattttgaataccac 32883853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 99 - 177
Target Start/End: Complemental strand, 10617102 - 10617024
Alignment:
Q  99 atgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaa 177  Q
    ||||||||||||||||||| ||  | ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  10617102 atgtttttatgaaagacttgttattactaaaatatcactagaaaatctcacaaaatccatcaaaatctaatttattaaa 10617024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 212
Target Start/End: Complemental strand, 19251729 - 19251610
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    ||||| ||||||| ||| ||||| ||||||||||||||  |||||||||||||| |||||||||  |||||||||          |||||||||||||||    
T  19251729 aatcccaagaaatttcaggttttcatgaaagactttttattgctaaaatttcacaagaaaatccatcaaaatcca----------atttattaaacaatc 19251640  T
Q  183 cttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||| ||||| ||||||||    
T  19251639 cttcgaaatttgaatgattttgaataccac 19251610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 44121965 - 44122029
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  44121965 acaaaatccatcaaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 44122029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 509840 - 509727
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||  ||||          ||||||||||||||||||  ||||||||||||||| |||||    
T  509840 aagaaatctcatcttttcatgaaagactttttcttgttaaaatcccact----------acaaaatccatcaaaatccaatttattaaacaatcgttcga 509751  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  509750 aatttgaatgattttgaataccac 509727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 40460772 - 40460836
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||  ||||||||||||||| |||||||||||||| ||||| ||||||||    
T  40460772 acaaaatccatcaaaatccaatttattaaacaatcattcgaaatttgaatgattttgaataccac 40460836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 89 - 211
Target Start/End: Complemental strand, 29585698 - 29585586
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||| |||| |||||||||||||||||||| || ||||||| |||||          |||||||||||||||||  | ||||||||||||||||| |    
T  29585698 aagaaatttcatctttttatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaaattattaaacaatccttcaa 29585609  T
Q  189 aatttgaataattttcaatacca 211  Q
    ||||||||| ||||| |||||||    
T  29585608 aatttgaatgattttgaatacca 29585586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 110 - 212
Target Start/End: Original strand, 1470261 - 1470362
Alignment:
Q  110 aaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatac 209  Q
    ||||| |||||||||||||||||| |  |||||||||||||||| | |||||||||| ||| |||||||||| |||  |||||||||  ||||| |||||    
T  1470261 aaagattttttcatgctaaaattttatcagaaaatcccacaaaa-ctatcaaaatctaattcattaaacaatgctttaaaatttgaacgattttgaatac 1470359  T
Q  210 cac 212  Q
    |||    
T  1470360 cac 1470362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 44623295 - 44623357
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaat 154  Q
    |||| |||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||    
T  44623295 aaatatcatatttttatgagagactttttcattctaaaatttcactagaaaattccacaaaat 44623357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 46405494 - 46405560
Alignment:
Q  146 ccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||||  ||||||||||||||| || ||||||||||| ||||| ||||||||    
T  46405494 ccacaaaatccatcaaaatccaatttattaaacaatcatttgaaatttgaatgattttgaataccac 46405560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 37328062 - 37327998
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||||||||||||   |||||||||||||||||| ||||||||||| ||||| ||||||||    
T  37328062 acaaaatccatcaaaattcaatttattaaacaatcctttgaaatttgaatgattttgaataccac 37327998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 17001099 - 17001152
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  17001099 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 17001152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 47066828 - 47066775
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  47066828 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 47066775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 447913 - 447854
Alignment:
Q  153 atccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||||||||  ||| ||||||||||| |||||||||||||| ||||| ||||||||    
T  447913 atccatcaaaatccaattaattaaacaatcattcgaaatttgaatgattttaaataccac 447854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 33892269 - 33892379
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||| ||| ||||||  ||||||| ||||||| ||||||||    
T  33892269 aaatctcatcttttaatgaaagactttttcttgttaaaattacacta----------caaaattcataaaaatccaatttatttaacaatcattcgaaat 33892358  T
Q  192 ttgaataattttcaataccac 212  Q
    |||||| ||||| ||||||||    
T  33892359 ttgaatgattttgaataccac 33892379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 39028232 - 39028184
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaa 196  Q
    ||||||||||||||||||  ||||||||||||||| |||| ||||||||    
T  39028232 acaaaatccatcaaaatccaatttattaaacaatctttcgtaatttgaa 39028184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 17001049 - 17001106
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcc 146  Q
    |||||||||||| |||| ||||||||||||||| || || |||| ||||| |||||||    
T  17001049 aagaaatctcatattttcatgaaagactttttcttgttataattacactacaaaatcc 17001106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 117; Significance: 9e-60; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 82 - 214
Target Start/End: Original strand, 49198269 - 49198401
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49198269 caatcctaagaaatatcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 49198368  T
Q  182 ccttcgaaatttgaataattttcaataccactg 214  Q
    |||||||||||||||| ||||| ||||||||||    
T  49198369 ccttcgaaatttgaatgattttgaataccactg 49198401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 6304252 - 6304383
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6304252 caatcataagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 6304351  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  6304352 ccttcgaaatttgaatgattttgaataccact 6304383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 19451808 - 19451939
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  19451808 caatcataagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacgat 19451907  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  19451908 ccttcgaaatttgaatgattttgaataccact 19451939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 47654351 - 47654482
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  47654351 caatcctaagaaatctcatgttttcatgaaatactttttcatgctaaaatttccctagaaaattccacaaaatccatcaaaatctgatttattaaacaat 47654450  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||||||||| |||||||||    
T  47654451 ccttcgaaatttgaataattttgaataccact 47654482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 50192550 - 50192681
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50192550 caatcctaaaaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 50192649  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||| |||||||||| ||||| |||||||||    
T  50192650 ccttcaaaatttgaatgattttgaataccact 50192681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 82 - 210
Target Start/End: Complemental strand, 21222347 - 21222219
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  21222347 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactaaaaaatcccacaaaatccatcaaaatcttatttattaaacaat 21222248  T
Q  182 ccttcgaaatttgaataattttcaatacc 210  Q
    |||||||||||||||| ||||| ||||||    
T  21222247 ccttcgaaatttgaatgattttgaatacc 21222219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 45760009 - 45760140
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45760009 caatcctaagaaatctcatgttttcatcaaatactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 45760108  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||| ||||||| ||||| |||||||||    
T  45760109 ccttcgaagtttgaatgattttgaataccact 45760140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 35279872 - 35279741
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35279872 caattctaagaaatctcatgttttcatgaaagactttttcatgttgaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 35279773  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||| ||| ||||| |||||||||    
T  35279772 ccttcgaaatttaaatgattttgaataccact 35279741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 28824373 - 28824502
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28824373 caatcctaagaaatctcatgtttttataaaagactttttcatgttaaaatttccctagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 28824472  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
     ||||||||||||||| ||||| ||||||||    
T  28824473 -cttcgaaatttgaatgattttgaataccac 28824502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 35679128 - 35679258
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  35679128 caatcttaagaaatctcatgtcttcatgaaagactttttcatgctaaaatttcactagaaaatcccatcaaatccatcaaaatctgatttattaaacaat 35679227  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    |||||||||||||||| ||||| ||||||||    
T  35679228 ccttcgaaatttgaatgattttgaataccac 35679258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 31572197 - 31572327
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||| ||||||||||||||| ||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  31572197 caattctaagaaatctcatgatttcatgaaagactttttcatcctaaaatttcactataaaatcccacaaaatccatcaaaatctgatttattaaacaat 31572296  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    |||||||||||| ||| ||||| ||||||||    
T  31572297 ccttcgaaatttaaatgattttgaataccac 31572327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 45536150 - 45536013
Alignment:
Q  82 caatcctaagaaatctcatgttttt------atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 175  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45536150 caatcctaagaaatctcatgttttcgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttatta 45536051  T
Q  176 aacaatccttcgaaatttgaataattttcaataccact 213  Q
    ||||||| |||||||||||||| ||||| |||||||||    
T  45536050 aacaatctttcgaaatttgaatgattttgaataccact 45536013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 87 - 213
Target Start/End: Complemental strand, 49418279 - 49418153
Alignment:
Q  87 ctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttc 186  Q
    |||||||||||||| |||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||     
T  49418279 ctaagaaatctcatattttcatgaaagattttttcatgctaaaatttcaatagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttt 49418180  T
Q  187 gaaatttgaataattttcaataccact 213  Q
    ||||||||||| ||||| |||||||||    
T  49418179 gaaatttgaatgattttgaataccact 49418153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 92 - 212
Target Start/End: Original strand, 32588963 - 32589083
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| ||||    
T  32588963 aaatctcatgttttcatgaaagacttttttatgctaaaatttcactagaaaatctcacaaaatccatcaaaatccgatttattaaacaatccttcaaaat 32589062  T
Q  192 ttgaataattttcaataccac 212  Q
    |||||| ||||| ||||||||    
T  32589063 ttgaatgattttgaataccac 32589083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 47780911 - 47780780
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47780911 caatcttaagaaatctcatgttttcatgaaaaactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 47780812  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||  || ||||||| ||||| |||| ||||    
T  47780811 ccttttaattttgaatgattttgaatatcact 47780780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 9577432 - 9577558
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  9577432 caatcccaagaaatctcatgttttcatgaaagattttttcattctaaaatttcactagaaaatctcacaaaatccatcaaaatccaatttattaaacaat 9577531  T
Q  182 ccttcgaaatttgaataattttcaata 208  Q
    ||||| |||||||||| ||||| ||||    
T  9577532 ccttctaaatttgaatgattttgaata 9577558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 29556305 - 29556173
Alignment:
Q  82 caatcctaagaaatctcatgttttt-atgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaa 180  Q
    ||||||||||||||||||||| ||| || ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  29556305 caatcctaagaaatctcatgtgtttcataaaagactttttcaagctaaaatttcattagaaaatcccataaaatccatcaaaatctaatttattaaacaa 29556206  T
Q  181 tccttcgaaatttgaataattttcaataccact 213  Q
    || |||||||||||||| ||||| |||| ||||    
T  29556205 tctttcgaaatttgaatgattttgaataacact 29556173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 6312767 - 6312644
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  6312767 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 6312668  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  6312667 aatttgaatgattttgaataccac 6312644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 29396395 - 29396518
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  29396395 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 29396494  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  29396495 aatttgaatgattttgaataccac 29396518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 82 - 208
Target Start/End: Original strand, 37014640 - 37014766
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||   |||||| |||||||    
T  37014640 caatcttaagaaatctcatgtttttatgagagactttttcatgctaaaatttcactagaaaatccgacaaaatccatcaaaattcaatttataaaacaat 37014739  T
Q  182 ccttcgaaatttgaataattttcaata 208  Q
    | || ||||||||||| ||||| ||||    
T  37014740 ctttagaaatttgaatgattttgaata 37014766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 51701770 - 51701650
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  51701770 aaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcgaaat 51701671  T
Q  192 ttgaataattttcaataccac 212  Q
    |||||| ||||| ||||||||    
T  51701670 ttgaatgattttgaataccac 51701650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 48177469 - 48177592
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  48177469 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 48177568  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  48177569 aatttgaatgattttgaataccac 48177592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 90 - 212
Target Start/End: Complemental strand, 46328234 - 46328112
Alignment:
Q  90 agaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaa 189  Q
    |||||||| || |||||||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||| ||||||||||||||||||    
T  46328234 agaaatcttatctttttatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaattaattaaacaatccttcgaa 46328135  T
Q  190 atttgaataattttcaataccac 212  Q
    |||||||| ||||| ||||||||    
T  46328134 atttgaatgattttgaataccac 46328112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 117 - 213
Target Start/End: Complemental strand, 730314 - 730218
Alignment:
Q  117 ttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccact 213  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||| |||||||||    
T  730314 ttttcatgctaaaatttcactagaaaatctcacaaaatccatcaaaatctgatttattaaacaattcgtcgaaatttgaatgattttgaataccact 730218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 25612350 - 25612227
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || |||||||  |||| ||||||||||||||||||||||||||  |||||||||||||||||| ||    
T  25612350 aagaaatctcatcttttcatgaaagactttttcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcctttga 25612251  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  25612250 aatttgaatgattttgaataccac 25612227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 28387400 - 28387523
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||||||||||||||||||  || |||||||  |||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  28387400 aagaaatctcatctttttatgaaagacttttttttgttaaaattaaactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatccttcga 28387499  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| | ||| ||||||||    
T  28387500 aatttgaatgaatttgaataccac 28387523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 48524490 - 48524393
Alignment:
Q  111 aagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaata 208  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||||| ||||| ||||    
T  48524490 aagactttttcatgttaaaatttcactagaaaatcccacaaaatccatcaaaaactgatttattaaacaatctttcaaaatttgaatgattttgaata 48524393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 9322507 - 9322630
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||||   ||||||||||||||||||| |    
T  9322507 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatccttcta 9322606  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  9322607 aatttgaatgattttgaataccac 9322630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 15835060 - 15835183
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||  |||||||||||||||||| |     
T  15835060 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaatccaatttattaaacaatcctttgc 15835159  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  15835160 aatttgaatgattttgaataccac 15835183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 212
Target Start/End: Complemental strand, 33025703 - 33025583
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||          |||||||| |||||||||||    
T  33025703 caatcataagaaatctcatgttttcatgaaagactttttcatgctaaaattttattagaaaatcccacaa----------aatctgatgtattaaacaat 33025614  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    ||||| |||||||||| ||||| ||||||||    
T  33025613 ccttcaaaatttgaatgattttgaataccac 33025583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 38536106 - 38536219
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||| ||    
T  38536106 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 38536195  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||||||||| ||||||||    
T  38536196 aatttgaataattttgaataccac 38536219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 38558324 - 38558437
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| |||||          |||||||||||||||||  |||||||||||||||||| ||    
T  38558324 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacacta----------caaaatccatcaaaatccaatttattaaacaatcctttga 38558413  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||||||||| ||||||||    
T  38558414 aatttgaataattttgaataccac 38558437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 82 - 212
Target Start/End: Original strand, 48668785 - 48668905
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||| || ||||||||| |||| ||||||||||||||| || ||||||| ||||| | ||||||||||||||||          ||||||||||||||    
T  48668785 caatcccaacaaatctcatcttttcatgaaagactttttcttgttaaaattacactacagaatcccacaaaatcca----------atttattaaacaat 48668874  T
Q  182 ccttcgaaatttgaataattttcaataccac 212  Q
    | |||||||||||||||||||| ||||||||    
T  48668875 ctttcgaaatttgaataattttgaataccac 48668905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 955882 - 955823
Alignment:
Q  150 aaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatac 209  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  955882 aaaatccatcaaaatctgatttattaaacaacccttcgaaatttgaatgattttgaatac 955823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 212
Target Start/End: Complemental strand, 51085951 - 51085865
Alignment:
Q  126 taaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||| ||||||| ||||||||| ||||||||||  ||||||| || |||||||| |||||||||| ||||| ||||||||    
T  51085951 taaaatttcacaagaaaattccacaaaattcatcaaaatccaatttatttaataatccttcaaaatttgaattattttgaataccac 51085865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 29219469 - 29219356
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||| |||||||| || ||||||| ||||          ||||||||||||||||||  |||||||||||||||||||      
T  29219469 aagaaatctcatcttttcatgaaatactttttcttgttaaaattacact----------acaaaatccatcaaaatccaatttattaaacaatccttctt 29219380  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  29219379 aatttgaatgattttgaataccac 29219356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 18798614 - 18798561
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||  |||||||||||||||||||||||||||||| ||||| ||||||||    
T  18798614 caaaatccaatttattaaacaatccttcgaaatttgaatgattttgaataccac 18798561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 212
Target Start/End: Complemental strand, 45272765 - 45272656
Alignment:
Q  92 aaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaat 191  Q
    ||||||||| ||||||| ||||| |||||| || ||||||| ||||| |||||| |||||||||||          ||||||||||| ||||||||||||    
T  45272765 aaatctcatctttttataaaagattttttcttgttaaaattacactacaaaatctcacaaaatcca----------atttattaaac-atccttcgaaat 45272677  T
Q  192 ttgaataattttcaataccac 212  Q
    || ||||||||| ||||||||    
T  45272676 ttaaataattttgaataccac 45272656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 212
Target Start/End: Complemental strand, 47784542 - 47784456
Alignment:
Q  116 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||||||||||||| ||||||||||| |||||||||||          ||||||||||||||| || ||| ||||||||||||| ||||||||    
T  47784542 tttttcatgctaaaatttaactagaaaatctcacaaaatcca----------atttattaaacaatctttagaagtttgaataattttgaataccac 47784456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 90 - 192
Target Start/End: Complemental strand, 38320098 - 38319996
Alignment:
Q  90 agaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatccc-acaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||| |||| |||| ||||||||||||||  |||||||| ||||||| |||| ||| |||||||| |||||||||  ||||| ||||||||| ||| |    
T  38320098 agaaatatcatattttcatgaaagacttttttgtgctaaaa-ttcactaaaaaaacccaacaaaatctatcaaaatcctatttagtaaacaatcattcaa 38320000  T
Q  189 aatt 192  Q
    ||||    
T  38319999 aatt 38319996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 93 - 157
Target Start/End: Original strand, 5495117 - 5495181
Alignment:
Q  93 aatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 157  Q
    |||||||| |||| || || ||||||||| || ||||||| ||||| ||||||||||||||||||    
T  5495117 aatctcatcttttcataaaggactttttcttgttaaaattacactacaaaatcccacaaaatcca 5495181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 18798663 - 18798607
Alignment:
Q  90 agaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcc 146  Q
    ||||||||||| |||| ||||||||||||||| || ||||||| ||||| |||||||    
T  18798663 agaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcc 18798607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 212
Target Start/End: Complemental strand, 49231000 - 49230956
Alignment:
Q  168 atttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    |||||||||| ||||||||||||||||||| ||||| ||||||||    
T  49231000 atttattaaataatccttcgaaatttgaatgattttgaataccac 49230956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 209
Target Start/End: Original strand, 31622536 - 31622586
Alignment:
Q  159 caaaatctgatttattaaacaatccttcgaaatttgaataattttcaatac 209  Q
    ||||||| |||||||||||||||| || ||||||||||| ||||| |||||    
T  31622536 caaaatccgatttattaaacaatcttttgaaatttgaatgattttgaatac 31622586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 82 - 119
Target Start/End: Complemental strand, 48524842 - 48524805
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttt 119  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  48524842 caatcctaacaaatctcatgttttcatgaaagactttt 48524805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 146
Target Start/End: Complemental strand, 955904 - 955876
Alignment:
Q  118 tttcatgctaaaatttcactagaaaatcc 146  Q
    |||||||||||||||||||||||||||||    
T  955904 tttcatgctaaaatttcactagaaaatcc 955876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 15033 - 15164
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15033 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 15132  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  15133 ccttcgaaatttgaatgattttgaataccact 15164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 15676 - 15807
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15676 caatcctaagaaatttcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 15775  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  15776 ccttcgaaatttgaatgattttgaataccact 15807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 38605 - 38735
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  38605 caatcctaagaaatctcatgttttcatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctga-ttattaaacaat 38703  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    |||||||||||||||| ||||| |||||||||    
T  38704 ccttcgaaatttgaatgattttgaataccact 38735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 82 - 213
Target Start/End: Complemental strand, 102302 - 102171
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  102302 caatcataagaaatctcatatttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 102203  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    | |||||||||||||| ||||| |||||||||    
T  102202 ctttcgaaatttgaatgattttgaataccact 102171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 104; Significance: 5e-52; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 82 - 213
Target Start/End: Original strand, 38895 - 39026
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 181  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38895 caatcctaaggaatctcatgttttcatgaaagactttttcatgccaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaat 38994  T
Q  182 ccttcgaaatttgaataattttcaataccact 213  Q
    ||||| |||||||||| ||||| |||| ||||    
T  38995 ccttccaaatttgaatgattttgaatatcact 39026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 85 - 213
Target Start/End: Complemental strand, 100415 - 100287
Alignment:
Q  85 tcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatcct 184  Q
    ||||||||||||||||||||| ||||||||||||||| || |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||    
T  100415 tcctaagaaatctcatgttttcatgaaagactttttcttgttaaaatttcactagaaaaacccacaaaatccatcaaaatttgatttattaaacaatcct 100316  T
Q  185 tcgaaatttgaataattttcaataccact 213  Q
    | ||||||||||| ||||| |||||||||    
T  100315 ttgaaatttgaatgattttgaataccact 100287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 540 - 670
Alignment:
Q  83 aatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatc 182  Q
    |||||||||||||||||||||||  | |||||||||||||| | |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  540 aatcctaagaaatctcatgttttcgtcaaagactttttcataccaaaatttcactagaaaattccacaaaatccatcaaaatatgatttattaaacaatc 639  T
Q  183 cttcgaaatttgaataattttcaataccact 213  Q
    |||| |||||||||| ||||| |||||||||    
T  640 cttccaaatttgaatgattttgaataccact 670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 1063 - 941
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||||||||||  | ||||||| ||||| ||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  1063 aagaaatctcatattttaatgaaagactttttctagttaaaattacactacaaaatcccacaaaatccatcaaaatct-atttattaaataattcttcga 965  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  964 aatttgaatgattttgaataccac 941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 10760 - 10637
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||| |||||||||||||||   |||||||||||||||||| ||    
T  10760 aagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccataaaatccatcaaaattcaatttattaaacaatcctttga 10661  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  10660 aatttgaatgattttgaataccac 10637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 39624 - 39747
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||| ||||||||||    
T  39624 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaataatccttcga 39723  T
Q  189 aatttgaataattttcaataccac 212  Q
    | ||||||| ||||| ||||||||    
T  39724 agtttgaatgattttgaataccac 39747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 89 - 210
Target Start/End: Original strand, 36914 - 37035
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    ||||||||| || |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||||||||||  |||||||||||||| ||||||    
T  36914 aagaaatcttatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatgcttcga 37013  T
Q  189 aatttgaataattttcaatacc 210  Q
    ||||| ||| ||||| ||||||    
T  37014 aattttaatgattttgaatacc 37035  T

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Target: scaffold0042 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 89 - 212
Target Start/End: Original strand, 58083 - 58206
Alignment:
Q  89 aagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||| |||| |||||||| ||| || || |||||||  |||| ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  58083 aagaaatctcatcttttcatgaaagattttctcttgttaaaattatactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 58182  T
Q  189 aatttgaataattttcaataccac 212  Q
    ||||||||| ||||| ||||||||    
T  58183 aatttgaatgattttgaataccac 58206  T

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Target: scaffold0839 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 102 - 188
Target Start/End: Original strand, 3712 - 3798
Alignment:
Q  102 tttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcga 188  Q
    |||||||||||||| ||||| || ||||||| ||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||    
T  3712 tttttatgaaagaccttttcttgttaaaattacactacaaaatcccacaaaatccatcaaaatccaatttattaaacaatcattcga 3798  T

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Target: scaffold0347 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 14967 - 14892
Alignment:
Q  82 caatcctaagaaatctcatgtttttatgaaagactttttcatgctaaaatttcactagaaaatcccacaaaatcca 157  Q
    ||||| ||||||||||||| |||| ||||||||||||||| || ||||||| ||||| ||||||||||||||||||    
T  14967 caatcttaagaaatctcatcttttcatgaaagactttttcttgttaaaattacactacaaaatcccacaaaatcca 14892  T

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Target: scaffold0922 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 4337 - 4277
Alignment:
Q  152 aatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||  ||||||||||||||||||| |||||||||| ||||| ||||||||    
T  4337 aatccatcaaaatccaatttattaaacaatccttcaaaatttgaatgattttgaataccac 4277  T

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Target: scaffold0306 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Complemental strand, 14023 - 13959
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||  ||||||||||||||| || ||||||||||| ||||| ||||||||    
T  14023 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccac 13959  T

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Target: scaffold0152 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 212
Target Start/End: Original strand, 21304 - 21368
Alignment:
Q  148 acaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaataccac 212  Q
    ||||||||||||||||||  ||||||||||||||| || ||||||||||| ||||| ||||||||    
T  21304 acaaaatccatcaaaatccaatttattaaacaatcttttgaaatttgaatgattttgaataccac 21368  T

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Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 199998 - 199905
Alignment:
Q  116 tttttcatgctaaaatttcactagaaaatcccacaaaatccatcaaaatctgatttattaaacaatccttcgaaatttgaataattttcaatac 209  Q
    ||||| || ||||| |||||||| |||||| ||||||||| ||||||||   |||||||||||| || ||| |||||||||| ||||| |||||    
T  199998 ttttttatactaaagtttcactaaaaaatctcacaaaatcaatcaaaattcaatttattaaacactctttcaaaatttgaatgattttaaatac 199905  T

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