View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17841_high_33 (Length: 304)

Name: NF17841_high_33
Description: NF17841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17841_high_33
NF17841_high_33
[»] chr4 (7 HSPs)
chr4 (12-183)||(22523633-22523804)
chr4 (256-304)||(22523877-22523925)
chr4 (137-183)||(22471352-22471398)
chr4 (85-123)||(23580056-23580094)
chr4 (127-183)||(25497624-25497680)
chr4 (127-175)||(4071946-4071994)
chr4 (127-183)||(50298584-50298639)
[»] chr1 (5 HSPs)
chr1 (127-176)||(49692005-49692054)
chr1 (129-183)||(43371837-43371891)
chr1 (129-174)||(48536645-48536690)
chr1 (127-167)||(6557041-6557081)
chr1 (127-183)||(51929408-51929464)
[»] chr5 (3 HSPs)
chr5 (134-183)||(37968952-37969001)
chr5 (127-167)||(11064735-11064775)
chr5 (82-110)||(31694545-31694573)
[»] chr3 (8 HSPs)
chr3 (127-183)||(3776336-3776392)
chr3 (127-175)||(25258840-25258888)
chr3 (128-179)||(28283549-28283600)
chr3 (127-169)||(44014758-44014800)
chr3 (127-183)||(21872241-21872297)
chr3 (151-183)||(22667495-22667527)
chr3 (151-183)||(22724134-22724166)
chr3 (55-83)||(43038764-43038792)
[»] chr2 (4 HSPs)
chr2 (127-183)||(40158786-40158842)
chr2 (129-175)||(32837393-32837439)
chr2 (127-183)||(787400-787456)
chr2 (127-183)||(4350758-4350814)
[»] chr8 (8 HSPs)
chr8 (152-183)||(25881361-25881392)
chr8 (137-183)||(2487954-2488000)
chr8 (153-183)||(8536001-8536031)
chr8 (127-169)||(16162828-16162870)
chr8 (131-180)||(21130684-21130733)
chr8 (127-175)||(9836805-9836853)
chr8 (83-146)||(11000552-11000618)
chr8 (131-183)||(11376775-11376827)
[»] chr6 (3 HSPs)
chr6 (130-173)||(20351219-20351262)
chr6 (127-179)||(32171333-32171385)
chr6 (77-109)||(35070483-35070515)
[»] scaffold0311 (1 HSPs)
scaffold0311 (152-182)||(10564-10594)
[»] scaffold0024 (1 HSPs)
scaffold0024 (127-183)||(27644-27700)
[»] chr7 (3 HSPs)
chr7 (127-183)||(3836629-3836685)
chr7 (127-179)||(25670536-25670588)
chr7 (139-183)||(25907583-25907627)


Alignment Details
Target: chr4 (Bit Score: 164; Significance: 1e-87; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 12 - 183
Target Start/End: Original strand, 22523633 - 22523804
Alignment:
Q  12 agcataggcaattatcatgataatcgttatgtataaggctgagctatttcatataagctataagttgttttagagcttatgaaaataagttgaaaacaaa 111  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22523633 agcataggaaattatcatgataatcgttatgtataaggctgggctatttcatataagctataagttgttttagagcttatgaaaataagttgaaaacaaa 22523732  T
Q  112 tgaacatatcataactcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22523733 tgaacatatcataactcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 22523804  T

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Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 256 - 304
Target Start/End: Original strand, 22523877 - 22523925
Alignment:
Q  256 gtgaatgagattaatgagggaaaagagattatacttccattttggccag 304  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  22523877 gtgaatgagattaatgaggaaaaagagattatacttccattttggccag 22523925  T

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Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 22471352 - 22471398
Alignment:
Q  137 ttttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||  | ||||||||||||||||| |||||||||||||    
T  22471352 ttttcataagttctcccaaacagtctcacaagtgcttatgtcagtag 22471398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 123
Target Start/End: Complemental strand, 23580094 - 23580056
Alignment:
Q  85 agcttatgaaaataagttgaaaacaaatgaacatatcat 123  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  23580094 agcttatgaaaataagttgaatgcaaatgaacatatcat 23580056  T

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Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 25497624 - 25497680
Alignment:
Q  127 tcataagctattttcataag-ttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||| |||||||||||| || || ||||| |||||||||||||||||||||||||    
T  25497624 tcataagatattttcataagctttac-caaactgtctcacaagtacttatgtcagtag 25497680  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 4071946 - 4071994
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttat 175  Q
    ||||||||| |||||||||| |  ||||||||||||||||||| |||||    
T  4071946 tcataagctgttttcataagctctctcaaacagtctcacaagtgcttat 4071994  T

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Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 50298584 - 50298639
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    |||||||||||||| |||||||    ||||||||||||||||| |||||||||||||    
T  50298584 tcataagctatttt-ataagtttttccaaacagtctcacaagtgcttatgtcagtag 50298639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Complemental strand, 49692054 - 49692005
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatg 176  Q
    ||||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  49692054 tcataagctattttcataagttctctcaaacagtctcacaagttcttatg 49692005  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 43371891 - 43371837
Alignment:
Q  129 ataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||| |||||||||| |  ||||||||||||||||||| |||||| ||||||    
T  43371891 ataagctgttttcataagctctctcaaacagtctcacaagtgcttatgccagtag 43371837  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 48536690 - 48536645
Alignment:
Q  129 ataagctattttcataagttgactcaaacagtctcacaagtactta 174  Q
    ||||||||||||||||||||  | |||||||||||||| |||||||    
T  48536690 ataagctattttcataagttctcccaaacagtctcacatgtactta 48536645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 6557041 - 6557081
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaa 167  Q
    ||||||||||||||||||||||  |||||| ||||||||||    
T  6557041 tcataagctattttcataagttctctcaaatagtctcacaa 6557081  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 51929464 - 51929408
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||| ||||||||||||  || ||||||| ||||| || |||||||||||||    
T  51929464 tcataagctgttttcataagttctcttaaacagtgtcacaggtgcttatgtcagtag 51929408  T

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Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 183
Target Start/End: Original strand, 37968952 - 37969001
Alignment:
Q  134 ctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||| |  |||||||||| ||||||||||||||||||||||    
T  37968952 ctattttcataagatctctcaaacagtttcacaagtacttatgtcagtag 37969001  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 167
Target Start/End: Original strand, 11064735 - 11064775
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaa 167  Q
    ||||||||||||||||||||||  |||||||| ||||||||    
T  11064735 tcataagctattttcataagttctctcaaacaatctcacaa 11064775  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 82 - 110
Target Start/End: Original strand, 31694545 - 31694573
Alignment:
Q  82 tagagcttatgaaaataagttgaaaacaa 110  Q
    |||||||||||||||||||||||||||||    
T  31694545 tagagcttatgaaaataagttgaaaacaa 31694573  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 3776392 - 3776336
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||| ||||||||||||  |||||||| |||||||| |||||||| ||||||    
T  3776392 tcataagctgttttcataagttctctcaaacattctcacaattacttatgccagtag 3776336  T

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Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 175
Target Start/End: Original strand, 25258840 - 25258888
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttat 175  Q
    |||||| || |||||||||||| ||||||| ||||||||||||||||||    
T  25258840 tcataaactcttttcataagttcactcaaaaagtctcacaagtacttat 25258888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 128 - 179
Target Start/End: Complemental strand, 28283600 - 28283549
Alignment:
Q  128 cataagctattttcataagttgactcaaacagtctcacaagtacttatgtca 179  Q
    |||||||||||||||||||||   |||||||||||||||||| || ||||||    
T  28283600 cataagctattttcataagttctttcaaacagtctcacaagtgctaatgtca 28283549  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Complemental strand, 44014800 - 44014758
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagt 169  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  44014800 tcataagctgttttcataagttttctcaaacagtctcacaagt 44014758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 21872297 - 21872241
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    |||||||||||||||| ||| |    ||||||||||||||||| |||||||||||||    
T  21872297 tcataagctattttcaaaagcttttccaaacagtctcacaagtgcttatgtcagtag 21872241  T

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Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 22667495 - 22667527
Alignment:
Q  151 ctcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||||||||| |||||||||||||    
T  22667495 ctcaaacagtctcacaagtgcttatgtcagtag 22667527  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 183
Target Start/End: Original strand, 22724134 - 22724166
Alignment:
Q  151 ctcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||||||||| |||||||||||||    
T  22724134 ctcaaacagtctcacaagtgcttatgtcagtag 22724166  T

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Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 83
Target Start/End: Complemental strand, 43038792 - 43038764
Alignment:
Q  55 ctatttcatataagctataagttgtttta 83  Q
    |||||||||||||||||||||||||||||    
T  43038792 ctatttcatataagctataagttgtttta 43038764  T

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Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 40158786 - 40158842
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||| ||||||||||||  | ||| ||||||||||||| |||||||||||||    
T  40158786 tcataagctgttttcataagttcccccaatcagtctcacaagttcttatgtcagtag 40158842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 32837393 - 32837439
Alignment:
Q  129 ataagctattttcataagttgactcaaacagtctcacaagtacttat 175  Q
    ||||||| ||||||||||||  | |||||||||||||||||||||||    
T  32837393 ataagctgttttcataagttctcccaaacagtctcacaagtacttat 32837439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 787400 - 787456
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||| ||||||||||||  | |||||||| |||||||| |||||| ||||||    
T  787400 tcataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgccagtag 787456  T

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Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 4350758 - 4350814
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||| ||||||||||||  |||||||| ||||  |||| |||||||||||||    
T  4350758 tcataagctgttttcataagttctctcaaacaatctcttaagtgcttatgtcagtag 4350814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 32; Significance: 0.000000007; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 152 - 183
Target Start/End: Complemental strand, 25881392 - 25881361
Alignment:
Q  152 tcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||||||||||||||||||||||    
T  25881392 tcaaacagtctcacaagtacttatgtcagtag 25881361  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 2488000 - 2487954
Alignment:
Q  137 ttttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||  | ||||||||||||||||| |||||||||||||    
T  2488000 ttttcataagttctcccaaacagtctcacaagtgcttatgtcagtag 2487954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 183
Target Start/End: Complemental strand, 8536031 - 8536001
Alignment:
Q  153 caaacagtctcacaagtacttatgtcagtag 183  Q
    |||||||||||||||||||||||||||||||    
T  8536031 caaacagtctcacaagtacttatgtcagtag 8536001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 16162828 - 16162870
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagt 169  Q
    ||||||||| ||||||||||||  |||||||||||||||||||    
T  16162828 tcataagctgttttcataagttttctcaaacagtctcacaagt 16162870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 180
Target Start/End: Original strand, 21130684 - 21130733
Alignment:
Q  131 aagctattttcataagttgactcaaacagtctcacaagtacttatgtcag 180  Q
    ||||||||| |||||| |  |||||||||||||||||||| |||||||||    
T  21130684 aagctatttccataagctctctcaaacagtctcacaagtatttatgtcag 21130733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 175
Target Start/End: Complemental strand, 9836853 - 9836805
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttat 175  Q
    |||||||||||||  |||||||| |||||||| |||||||||| |||||    
T  9836853 tcataagctatttctataagttgtctcaaacaatctcacaagtgcttat 9836805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 83 - 146
Target Start/End: Complemental strand, 11000618 - 11000552
Alignment:
Q  83 agagcttatgaaaataagttgaaaacaa---atgaacatatcataactcataagctattttcataag 146  Q
    |||||||||| ||||||| |||| ||||   |||||||  ||||||||||||||| |||||||||||    
T  11000618 agagcttatggaaataagctgaagacaacttatgaacaagtcataactcataagcgattttcataag 11000552  T

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Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 183
Target Start/End: Original strand, 11376775 - 11376827
Alignment:
Q  131 aagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||||||||  | |||| ||||||||||| |||||| |||||||    
T  11376775 aagctattttcataagttctcccaaatagtctcacaagaacttatatcagtag 11376827  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000007; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 130 - 173
Target Start/End: Original strand, 20351219 - 20351262
Alignment:
Q  130 taagctattttcataagttgactcaaacagtctcacaagtactt 173  Q
    ||||||||||||||||| || | |||||||||||||||||||||    
T  20351219 taagctattttcataagctgtcccaaacagtctcacaagtactt 20351262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 32171385 - 32171333
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtca 179  Q
    ||||||||| |||||||||| |  ||||||||||||| ||||| |||||||||    
T  32171385 tcataagctgttttcataagctctctcaaacagtctcgcaagtgcttatgtca 32171333  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 77 - 109
Target Start/End: Complemental strand, 35070515 - 35070483
Alignment:
Q  77 tgttttagagcttatgaaaataagttgaaaaca 109  Q
    ||||| |||||||||||||||||||||||||||    
T  35070515 tgtttgagagcttatgaaaataagttgaaaaca 35070483  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 182
Target Start/End: Complemental strand, 10594 - 10564
Alignment:
Q  152 tcaaacagtctcacaagtacttatgtcagta 182  Q
    |||||||||||||||||||||||||||||||    
T  10594 tcaaacagtctcacaagtacttatgtcagta 10564  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 27644 - 27700
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||| |||||| |  | |||||||||||| |||||| |||||||||||    
T  27644 tcataagctatttccataagctctcccaaacagtctcagaagtacatatgtcagtag 27700  T

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Target: chr7 (Bit Score: 29; Significance: 0.0000004; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 3836685 - 3836629
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    ||||||||||||||||||||||  | |||||||| |||||||| |||| | ||||||    
T  3836685 tcataagctattttcataagttctcccaaacagtttcacaagtgcttaagccagtag 3836629  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 179
Target Start/End: Complemental strand, 25670588 - 25670536
Alignment:
Q  127 tcataagctattttcataagttgactcaaacagtctcacaagtacttatgtca 179  Q
    ||||||| | ||||||||||||  ||||||||||||||||||  |||||||||    
T  25670588 tcataagttgttttcataagttttctcaaacagtctcacaagagcttatgtca 25670536  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 25907627 - 25907583
Alignment:
Q  139 ttcataagttgactcaaacagtctcacaagtacttatgtcagtag 183  Q
    |||||||||| | | |||||||||||||||| |||||||||||||    
T  25907627 ttcataagttcagtgaaacagtctcacaagtgcttatgtcagtag 25907583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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