View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17841_high_37 (Length: 293)
Name: NF17841_high_37
Description: NF17841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17841_high_37 |
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Alignment Details
Target: chr4 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 19 - 281
Target Start/End: Original strand, 44695126 - 44695388
Alignment:
| Q |
19 |
gcaggtaatgccatttcattcagggttctaataaattaacatggctctcatttgtttgtggagacctttgagggctaaactgtttctatacatatttcta |
118 |
Q |
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| T |
44695126 |
gcaggtaatgccatttcattcagggttctaataaattaacatggctctcatttgtttgtggagacctttgacggctaaactgtttctatacatatttcta |
44695225 |
T |
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| Q |
119 |
aatggatatggcctacataaactatgattctatgagatactcacttgtttcctaagtgcatatttagatgccaatcatatgaaatgaagattgaaaaaag |
218 |
Q |
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|| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
44695226 |
aacggatatggcatacataaactatgattctatgagatactcacttgtttcctaagtgcaaatttagatgccaatcatatgaaatgaagattgaaaaaag |
44695325 |
T |
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| Q |
219 |
atgaannnnnnnngatagtttctgaaaactctgcatgtatgtgaagtcattgaatggtatttt |
281 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44695326 |
atgaaatttttttgatagtttctgaaaactctgcatgtatgtgaagtcattgaatggtatttt |
44695388 |
T |
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