View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17842_high_12 (Length: 329)
Name: NF17842_high_12
Description: NF17842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17842_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 10 - 315
Target Start/End: Original strand, 26944985 - 26945290
Alignment:
| Q |
10 |
ttatatgaagatcctttccattatcagaatatttttatttttgaagtgaaatttatcttcttttatatatagcttggagtacctctagtactctatttta |
109 |
Q |
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| T |
26944985 |
ttatatgaagatcctttccattatcagaatatttttatttttgaagtgaaatttctcttcttttatatatagcttggagtacctctagtactctatttta |
26945084 |
T |
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| Q |
110 |
tattaaaaagaattggttacttcaaaaagaaatgattgccacatcttttgcatatttagataaatgtattcatatctaattataattctattttgttttt |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26945085 |
tattaaaaagaattggttacttcaaaaagaaatgattgccacatcttttgcatatttagataaatgtattcatatctaattataattctattttgttttt |
26945184 |
T |
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| Q |
210 |
ggtaggtgagtgtgaaaaccctagaaaagggtttcctgattaatgtgcttttggaaaagaatagccctggtatgttggtgtcaatactggaagcttttga |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26945185 |
ggtaggtgagtgtgaaaaccctagaaaagggtttcctgattaatgtgcttttggaaaagaatagccctggtatgttggtgtcaatactggaagcttttga |
26945284 |
T |
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| Q |
310 |
agatct |
315 |
Q |
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|||||| |
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| T |
26945285 |
agatct |
26945290 |
T |
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