View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17844_high_28 (Length: 373)
Name: NF17844_high_28
Description: NF17844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17844_high_28 |
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Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 38 - 355
Target Start/End: Original strand, 25986139 - 25986457
Alignment:
| Q |
38 |
gagtggagggacaatataaacttactttgtcccaaaaacttaaggttctcaaaataatatttttgttaagcaaataatgttgaaccgttgtgattta-ac |
136 |
Q |
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| T |
25986139 |
gagtggagggagaatataaacttactttgtcccaaaaacttaaggttctcaaaataatatttttgttaagcaaattatgttgaaccattgtgatttagac |
25986238 |
T |
|
| Q |
137 |
aaaagttacattttatagtgtcataacatgaccatggttcaccatgattttttattctcaccaatcatccaaatatgcacatattcacattacaacattg |
236 |
Q |
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|||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
25986239 |
aaaagttacattttgtagtgtcatagcatggccatggttcaccatgatttttcattctcaccaatcatccaaatatgcacatatttacattacaacattg |
25986338 |
T |
|
| Q |
237 |
gggatatggatagctcacttgattcagctaaggggtttaatcagttttaagagttaaaaatccatggttcgaatcctatcaatagaaagaaaatactaac |
336 |
Q |
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||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
25986339 |
gggatatggatagctcacttgattcagctaaaggatttaatcagttttaagagttaaaaatccatggttcgaatcctataaatagaaagaaaatactaac |
25986438 |
T |
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| Q |
337 |
atataacaattaccatatt |
355 |
Q |
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|||||||||||| |||||| |
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| T |
25986439 |
atataacaattaacatatt |
25986457 |
T |
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