View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17844_high_54 (Length: 238)
Name: NF17844_high_54
Description: NF17844
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17844_high_54 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 17 - 229
Target Start/End: Complemental strand, 4851763 - 4851551
Alignment:
| Q |
17 |
gtttggttatgtggccgatcaaccaaaatcacgacaagatttcacgtcaacatagaagcttagatttgtagcttcagggttttcacgacaaatatgcatt |
116 |
Q |
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| T |
4851763 |
gtttggttatgtggccgatcaaccaaaatcacgacaagatttcacgtcaacatagaagcttagatttgtagcttcagggttttcacgacaaatatgcatt |
4851664 |
T |
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| Q |
117 |
gaaacacaacacacaaattcaagatagcaccatgcatgtgtgtgcactcaaaacccttacctaattgccactagtatttgagaccaatggagtaataata |
216 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4851663 |
gaaacacaacacacaagttcaagatagcaccatgcatgtgtgtgcactcaaaacccttacctaattgccactagtatttgagaccaatggagtaataata |
4851564 |
T |
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| Q |
217 |
tcttccttcttat |
229 |
Q |
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|||||| |||||| |
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| T |
4851563 |
tcttccctcttat |
4851551 |
T |
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