View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17845_high_3 (Length: 450)

Name: NF17845_high_3
Description: NF17845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17845_high_3
NF17845_high_3
[»] chr6 (37 HSPs)
chr6 (249-434)||(1703679-1703864)
chr6 (12-178)||(1703935-1704095)
chr6 (14-166)||(17334888-17335041)
chr6 (14-166)||(4984356-4984509)
chr6 (14-166)||(17237075-17237228)
chr6 (14-161)||(16892610-16892758)
chr6 (12-166)||(35001723-35001878)
chr6 (14-166)||(8027907-8028060)
chr6 (14-166)||(12059562-12059715)
chr6 (14-166)||(12653079-12653232)
chr6 (35-131)||(20226001-20226097)
chr6 (35-131)||(22119985-22120081)
chr6 (24-166)||(25064381-25064524)
chr6 (14-136)||(33110746-33110869)
chr6 (14-166)||(4088595-4088748)
chr6 (14-166)||(16419293-16419446)
chr6 (14-167)||(8196195-8196349)
chr6 (14-166)||(8497102-8497256)
chr6 (35-130)||(30608360-30608455)
chr6 (28-90)||(3688715-3688777)
chr6 (30-76)||(31852092-31852138)
chr6 (22-167)||(33740366-33740512)
chr6 (113-166)||(7875833-7875886)
chr6 (113-166)||(28634902-28634955)
chr6 (35-79)||(67897-67941)
chr6 (53-166)||(7975994-7976109)
chr6 (12-79)||(30879614-30879681)
chr6 (16-173)||(24590475-24590635)
chr6 (113-166)||(7880891-7880944)
chr6 (113-166)||(34489436-34489489)
chr6 (22-67)||(35086249-35086294)
chr6 (36-132)||(546182-546278)
chr6 (35-79)||(9341547-9341591)
chr6 (39-79)||(21426582-21426622)
chr6 (15-166)||(25337701-25337853)
chr6 (35-67)||(29743147-29743179)
chr6 (35-79)||(33053064-33053108)
[»] chr7 (41 HSPs)
chr7 (15-179)||(43369550-43369714)
chr7 (22-166)||(7640564-7640709)
chr7 (14-166)||(34773846-34773999)
chr7 (14-166)||(2843030-2843183)
chr7 (15-166)||(20083474-20083626)
chr7 (12-166)||(26583842-26583998)
chr7 (12-166)||(433480-433635)
chr7 (35-88)||(9977097-9977150)
chr7 (14-166)||(26492500-26492653)
chr7 (15-166)||(35261433-35261585)
chr7 (35-94)||(13796810-13796869)
chr7 (35-130)||(28407763-28407858)
chr7 (35-166)||(34899413-34899547)
chr7 (35-130)||(47590462-47590557)
chr7 (69-167)||(6002218-6002316)
chr7 (35-93)||(30756701-30756759)
chr7 (14-166)||(20116717-20116869)
chr7 (14-166)||(23085656-23085809)
chr7 (14-166)||(23786710-23786863)
chr7 (14-166)||(32684803-32684956)
chr7 (14-166)||(45198822-45198975)
chr7 (35-79)||(8001442-8001486)
chr7 (35-79)||(28044652-28044696)
chr7 (35-168)||(35664940-35665075)
chr7 (44-164)||(36143910-36144030)
chr7 (22-78)||(46244149-46244205)
chr7 (35-79)||(48316708-48316752)
chr7 (107-166)||(23425162-23425221)
chr7 (39-94)||(25255382-25255437)
chr7 (35-166)||(40993308-40993442)
chr7 (12-166)||(46822148-46822303)
chr7 (116-166)||(17611629-17611679)
chr7 (113-167)||(21609457-21609511)
chr7 (113-166)||(1485045-1485098)
chr7 (30-67)||(4999937-4999974)
chr7 (39-132)||(11343964-11344057)
chr7 (113-166)||(42066851-42066904)
chr7 (35-79)||(24069290-24069334)
chr7 (35-79)||(39171486-39171530)
chr7 (35-79)||(48061573-48061617)
chr7 (15-79)||(49148011-49148075)
[»] chr4 (49 HSPs)
chr4 (22-161)||(36184687-36184826)
chr4 (14-166)||(9528666-9528819)
chr4 (15-167)||(4821064-4821217)
chr4 (14-166)||(25274030-25274183)
chr4 (22-166)||(38706499-38706644)
chr4 (14-166)||(50766301-50766454)
chr4 (15-166)||(12265610-12265761)
chr4 (14-160)||(44947559-44947706)
chr4 (13-88)||(49072632-49072707)
chr4 (14-166)||(51318132-51318285)
chr4 (23-166)||(46990920-46991064)
chr4 (24-166)||(1532065-1532208)
chr4 (12-166)||(4644003-4644158)
chr4 (36-127)||(27652113-27652204)
chr4 (14-166)||(10359338-10359490)
chr4 (35-132)||(42032372-42032469)
chr4 (14-161)||(37188389-37188537)
chr4 (22-85)||(26123416-26123479)
chr4 (12-166)||(43444537-43444692)
chr4 (27-168)||(3335951-3336093)
chr4 (14-167)||(9645312-9645466)
chr4 (12-152)||(21090287-21090428)
chr4 (62-167)||(29966522-29966627)
chr4 (14-166)||(34024227-34024380)
chr4 (14-166)||(53616439-53616592)
chr4 (35-79)||(6155119-6155163)
chr4 (35-79)||(9178522-9178566)
chr4 (14-161)||(47417809-47417957)
chr4 (35-79)||(56040542-56040586)
chr4 (30-93)||(7008871-7008934)
chr4 (12-166)||(9284056-9284211)
chr4 (35-78)||(29120276-29120319)
chr4 (14-166)||(43153806-43153956)
chr4 (13-88)||(43318153-43318228)
chr4 (12-166)||(45227830-45227985)
chr4 (35-85)||(22305511-22305561)
chr4 (113-159)||(31381512-31381558)
chr4 (36-94)||(36194878-36194936)
chr4 (35-97)||(37684026-37684088)
chr4 (35-77)||(45418681-45418723)
chr4 (113-167)||(49680777-49680831)
chr4 (113-166)||(20569504-20569557)
chr4 (27-152)||(21364950-21365075)
chr4 (39-132)||(31891130-31891223)
chr4 (35-79)||(19853408-19853452)
chr4 (35-79)||(32766683-32766727)
chr4 (35-79)||(37465651-37465695)
chr4 (35-79)||(47320308-47320352)
chr4 (35-79)||(53811197-53811241)
[»] chr2 (50 HSPs)
chr2 (14-166)||(27949565-27949718)
chr2 (14-166)||(8806005-8806158)
chr2 (35-166)||(30923264-30923395)
chr2 (15-166)||(9986131-9986283)
chr2 (12-166)||(15690539-15690694)
chr2 (12-166)||(21570197-21570352)
chr2 (35-94)||(4904027-4904086)
chr2 (36-111)||(7604336-7604411)
chr2 (71-166)||(41712578-41712673)
chr2 (22-160)||(10548333-10548470)
chr2 (25-166)||(41431178-41431320)
chr2 (35-133)||(41694780-41694877)
chr2 (35-132)||(17248991-17249088)
chr2 (69-166)||(40625846-40625943)
chr2 (14-160)||(8971423-8971570)
chr2 (35-130)||(11985079-11985174)
chr2 (12-166)||(20046871-20047026)
chr2 (35-101)||(1421835-1421901)
chr2 (14-166)||(4228261-4228415)
chr2 (14-166)||(27248940-27249093)
chr2 (44-165)||(39284354-39284475)
chr2 (36-132)||(10237060-10237156)
chr2 (35-130)||(7677719-7677814)
chr2 (30-101)||(10929819-10929890)
chr2 (107-166)||(13718959-13719018)
chr2 (36-179)||(24461603-24461745)
chr2 (35-94)||(28533836-28533895)
chr2 (35-94)||(32448498-32448557)
chr2 (35-132)||(19597998-19598095)
chr2 (63-101)||(32190851-32190889)
chr2 (14-79)||(33229016-33229082)
chr2 (35-133)||(33760036-33760134)
chr2 (113-166)||(7015500-7015553)
chr2 (117-166)||(8308338-8308387)
chr2 (49-94)||(8809452-8809497)
chr2 (27-152)||(23903494-23903619)
chr2 (69-166)||(30420864-30420961)
chr2 (113-166)||(36234237-36234290)
chr2 (14-166)||(38575275-38575427)
chr2 (14-165)||(83971-84123)
chr2 (36-132)||(3309105-3309201)
chr2 (35-79)||(7646637-7646681)
chr2 (35-79)||(9169155-9169199)
chr2 (35-79)||(12554078-12554122)
chr2 (138-166)||(15439900-15439928)
chr2 (24-60)||(18695202-18695238)
chr2 (74-166)||(21132032-21132124)
chr2 (25-129)||(29279417-29279521)
chr2 (38-130)||(31788618-31788710)
chr2 (35-79)||(34335577-34335621)
[»] scaffold0136 (1 HSPs)
scaffold0136 (17-156)||(34581-34720)
[»] chr1 (47 HSPs)
chr1 (15-166)||(5856041-5856192)
chr1 (14-166)||(19715684-19715837)
chr1 (14-166)||(38520324-38520477)
chr1 (12-167)||(50271928-50272084)
chr1 (12-166)||(9686994-9687149)
chr1 (12-166)||(45425855-45426010)
chr1 (36-166)||(47133056-47133188)
chr1 (14-166)||(51872002-51872155)
chr1 (22-165)||(5324349-5324492)
chr1 (35-126)||(31919141-31919232)
chr1 (14-159)||(50148509-50148655)
chr1 (25-166)||(50165888-50166030)
chr1 (25-166)||(799641-799780)
chr1 (14-166)||(9172629-9172782)
chr1 (14-166)||(9180611-9180764)
chr1 (69-166)||(11454132-11454229)
chr1 (14-166)||(11709496-11709649)
chr1 (14-166)||(33291207-33291360)
chr1 (14-157)||(5701398-5701542)
chr1 (35-130)||(15431511-15431606)
chr1 (20-79)||(46399107-46399166)
chr1 (12-166)||(51868434-51868589)
chr1 (35-166)||(19061061-19061194)
chr1 (25-166)||(19723463-19723605)
chr1 (17-166)||(20266444-20266594)
chr1 (35-97)||(39888334-39888396)
chr1 (14-166)||(7342861-7343014)
chr1 (14-166)||(25406073-25406226)
chr1 (49-130)||(27456650-27456731)
chr1 (113-166)||(39987657-39987710)
chr1 (35-79)||(5983988-5984032)
chr1 (36-132)||(36775553-36775649)
chr1 (35-130)||(16989523-16989618)
chr1 (15-66)||(48809127-48809178)
chr1 (25-134)||(19052155-19052264)
chr1 (13-67)||(45393267-45393321)
chr1 (22-103)||(19885150-19885231)
chr1 (113-166)||(30879314-30879367)
chr1 (23-76)||(32873763-32873816)
chr1 (35-132)||(49627065-49627162)
chr1 (35-79)||(11462378-11462422)
chr1 (35-79)||(14872791-14872835)
chr1 (35-79)||(24583298-24583342)
chr1 (35-79)||(31984313-31984357)
chr1 (35-79)||(32395150-32395194)
chr1 (36-132)||(48750338-48750434)
chr1 (35-79)||(51373754-51373798)
[»] chr8 (50 HSPs)
chr8 (15-159)||(33298997-33299142)
chr8 (24-166)||(44099725-44099868)
chr8 (14-166)||(4809106-4809259)
chr8 (14-160)||(2656012-2656159)
chr8 (12-157)||(8441325-8441470)
chr8 (15-142)||(27746928-27747055)
chr8 (35-130)||(28086655-28086750)
chr8 (35-94)||(29617153-29617212)
chr8 (35-94)||(34609987-34610046)
chr8 (14-166)||(14906712-14906865)
chr8 (113-166)||(19876440-19876493)
chr8 (113-166)||(28240083-28240136)
chr8 (14-166)||(32724270-32724423)
chr8 (14-166)||(43889913-43890066)
chr8 (25-160)||(23851289-23851425)
chr8 (35-91)||(25238475-25238531)
chr8 (14-159)||(11464313-11464459)
chr8 (113-166)||(11725922-11725975)
chr8 (35-166)||(15344459-15344594)
chr8 (35-166)||(15433524-15433659)
chr8 (35-166)||(15524828-15524963)
chr8 (113-166)||(17427014-17427067)
chr8 (113-166)||(17430664-17430717)
chr8 (53-166)||(29777401-29777514)
chr8 (22-166)||(33342584-33342728)
chr8 (69-166)||(33896284-33896381)
chr8 (14-166)||(34611946-34612099)
chr8 (35-79)||(9637303-9637347)
chr8 (35-79)||(18890593-18890637)
chr8 (35-79)||(23230794-23230838)
chr8 (35-79)||(27110359-27110403)
chr8 (15-130)||(24186504-24186619)
chr8 (36-79)||(41896669-41896712)
chr8 (113-168)||(21238017-21238074)
chr8 (113-166)||(9072960-9073013)
chr8 (69-166)||(9619146-9619243)
chr8 (69-146)||(11197081-11197158)
chr8 (35-88)||(29939451-29939504)
chr8 (15-64)||(35812803-35812852)
chr8 (14-166)||(37565668-37565821)
chr8 (35-132)||(43833837-43833934)
chr8 (14-94)||(44578172-44578253)
chr8 (35-160)||(7198006-7198133)
chr8 (35-79)||(10377840-10377884)
chr8 (36-76)||(17427093-17427133)
chr8 (36-76)||(17430743-17430783)
chr8 (35-79)||(20553135-20553179)
chr8 (35-79)||(31013502-31013546)
chr8 (35-79)||(33214565-33214609)
chr8 (82-166)||(35141672-35141756)
[»] chr3 (46 HSPs)
chr3 (36-179)||(35175553-35175698)
chr3 (23-179)||(22803171-22803328)
chr3 (14-166)||(25162568-25162721)
chr3 (14-166)||(36906254-36906407)
chr3 (12-179)||(30648495-30648663)
chr3 (35-130)||(43017036-43017131)
chr3 (12-166)||(44907188-44907343)
chr3 (14-166)||(3848708-3848861)
chr3 (14-166)||(12116230-12116383)
chr3 (22-90)||(19862213-19862281)
chr3 (107-166)||(6823413-6823472)
chr3 (35-130)||(44959818-44959913)
chr3 (14-166)||(46934774-46934924)
chr3 (35-166)||(628730-628863)
chr3 (14-159)||(39917195-39917340)
chr3 (14-166)||(17237937-17238090)
chr3 (14-166)||(25631315-25631468)
chr3 (53-166)||(35498989-35499102)
chr3 (36-166)||(50194142-50194274)
chr3 (35-79)||(9797430-9797474)
chr3 (36-132)||(16235575-16235671)
chr3 (35-130)||(4711630-4711725)
chr3 (35-126)||(19619861-19619952)
chr3 (35-130)||(21533654-21533749)
chr3 (36-79)||(27706122-27706165)
chr3 (12-166)||(32607599-32607754)
chr3 (36-119)||(42455676-42455759)
chr3 (35-130)||(45568290-45568385)
chr3 (69-152)||(51628951-51629034)
chr3 (36-130)||(7448759-7448853)
chr3 (36-130)||(7456901-7456995)
chr3 (113-166)||(38440380-38440433)
chr3 (19-100)||(47176038-47176119)
chr3 (35-132)||(53807701-53807798)
chr3 (36-132)||(8914861-8914957)
chr3 (35-79)||(9998615-9998659)
chr3 (35-79)||(10108384-10108428)
chr3 (35-79)||(10229624-10229668)
chr3 (35-79)||(10233218-10233262)
chr3 (35-79)||(21313184-21313228)
chr3 (54-166)||(24396305-24396417)
chr3 (35-79)||(26275715-26275759)
chr3 (35-79)||(38860008-38860052)
chr3 (35-79)||(42460897-42460941)
chr3 (35-79)||(48650630-48650674)
chr3 (36-132)||(51923876-51923972)
[»] chr5 (42 HSPs)
chr5 (14-166)||(781525-781678)
chr5 (14-159)||(27266655-27266801)
chr5 (14-166)||(19259601-19259754)
chr5 (22-166)||(34881862-34882007)
chr5 (14-166)||(35475127-35475280)
chr5 (23-167)||(11192515-11192659)
chr5 (15-166)||(15571045-15571197)
chr5 (15-67)||(19100527-19100579)
chr5 (15-166)||(20257485-20257637)
chr5 (17-165)||(24549506-24549654)
chr5 (35-123)||(37985965-37986053)
chr5 (35-130)||(34945541-34945636)
chr5 (35-94)||(41630650-41630709)
chr5 (12-166)||(42580023-42580178)
chr5 (14-166)||(7247096-7247249)
chr5 (35-136)||(28097307-28097408)
chr5 (14-160)||(3271197-3271344)
chr5 (12-166)||(4954127-4954282)
chr5 (35-130)||(38597945-38598040)
chr5 (25-166)||(7241932-7242074)
chr5 (39-101)||(32691109-32691171)
chr5 (28-136)||(7612877-7612986)
chr5 (14-166)||(18677255-18677407)
chr5 (14-166)||(21060072-21060225)
chr5 (30-79)||(31078315-31078364)
chr5 (16-61)||(31802367-31802412)
chr5 (116-161)||(37483287-37483332)
chr5 (14-166)||(43148864-43149017)
chr5 (35-79)||(14082292-14082336)
chr5 (16-79)||(9762349-9762412)
chr5 (22-172)||(11768144-11768295)
chr5 (35-166)||(13007377-13007511)
chr5 (69-167)||(43008103-43008201)
chr5 (22-79)||(8514548-8514605)
chr5 (69-166)||(8771970-8772067)
chr5 (113-166)||(27752162-27752215)
chr5 (22-166)||(30298989-30299134)
chr5 (23-135)||(13468744-13468856)
chr5 (20-79)||(15571619-15571679)
chr5 (36-136)||(19983176-19983276)
chr5 (35-79)||(24229680-24229724)
chr5 (35-79)||(26825578-26825622)
[»] scaffold0009 (1 HSPs)
scaffold0009 (36-166)||(57895-58027)
[»] scaffold0113 (1 HSPs)
scaffold0113 (107-159)||(36486-36538)
[»] scaffold0445 (1 HSPs)
scaffold0445 (35-130)||(1493-1588)
[»] scaffold0049 (1 HSPs)
scaffold0049 (39-130)||(71145-71236)
[»] scaffold0039 (1 HSPs)
scaffold0039 (28-166)||(53207-53345)
[»] scaffold0146 (1 HSPs)
scaffold0146 (14-166)||(16109-16262)
[»] scaffold0003 (1 HSPs)
scaffold0003 (18-166)||(361588-361737)
[»] scaffold0050 (1 HSPs)
scaffold0050 (35-79)||(65938-65982)
[»] scaffold0347 (1 HSPs)
scaffold0347 (35-101)||(6179-6245)
[»] scaffold0443 (1 HSPs)
scaffold0443 (113-166)||(4440-4493)
[»] scaffold0372 (1 HSPs)
scaffold0372 (27-152)||(9474-9599)
[»] scaffold0022 (1 HSPs)
scaffold0022 (69-166)||(83226-83322)
[»] scaffold0026 (1 HSPs)
scaffold0026 (35-79)||(71766-71810)


Alignment Details
Target: chr6 (Bit Score: 174; Significance: 2e-93; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 249 - 434
Target Start/End: Complemental strand, 1703864 - 1703679
Alignment:
Q  249 cagataatgatgcactgtacattacttttattgatttcctagccatatttataaagagggaaaaaagataaacacctttgacctgaaaatagatttcacc 348  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703864 cagataatgatgcactgtacattacttatattgatttcctagacatatttataaagagggaaaaaagataaacacctttgacctgaaaatagatttcacc 1703765  T
Q  349 ataacaggataaataataaatttattatatttacgaaattaataacattaaataaggtctctgcttcaaagtttgtgcattctggt 434  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1703764 ataaaaggataaataataaatttattatatttacgaaattaataacattaaataaggtctctgcttcaaagtttgtgcattctggt 1703679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 12 - 178
Target Start/End: Complemental strand, 1704095 - 1703935
Alignment:
Q  12 gaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcat 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1704095 gaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcat 1703996  T
Q  112 ctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgatttaatttt 178  Q
    |||||||||||||||||||||||||||||||| |||      ||||||||||||||| |||||||||    
T  1703995 ctacgtttttagcgatgttgaatgacgtaatcaatc------aatgaataaatattgttttaatttt 1703935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 17334888 - 17335041
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||||||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | |||||     
T  17334888 atattccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatt 17334987  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  17334988 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 17335041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 4984509 - 4984356
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||||  ||||||||||| |||||||| | ||| ||| |||| ||| ||| || |||||||||||| ||| ||||||||| || ||| | | ||| |     
T  4984509 atattccgatcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttagatgatgtaagtttgttcgcagattcatcctt 4984410  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  4984409 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 4984356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 17237228 - 17237075
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||| | || ||| | | ||| |     
T  17237228 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtgtgttcgcagattcatcctt 17237129  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  17237128 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 17237075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 16892758 - 16892610
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  |||| |||||||| || ||| ||| |||||     
T  16892758 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgtcgtaagtttgttcgcagaatcatcatt 16892659  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 161  Q
    ||||||||||| | |||||||||| ||||||| || |||| ||||||||    
T  16892658 tacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaata 16892610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 35001723 - 35001878
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | |||     
T  35001723 gaatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattaatcc 35001822  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | |||||||||||||||||||||||| ||||||| |  |||| ||||||| |||||    
T  35001823 tttacgtttttagcgatgttgaatgatgtaatcttttgatttgaatgaatgaatat 35001878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 8028060 - 8027907
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||||||||||||||||| |||||||| | ||| ||| |||| || | || || |||||||||||  ||| ||| ||||| || ||||| | ||| |     
T  8028060 atattccagtcactttaattttatcatatatttttgtaggcattatgccattatatgctattaactttgatgatgtgagtttgttcgcaaattcatcctt 8027961  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||| | ||||||| || |||| ||||||| |||||    
T  8027960 tacgtttttagcggtgttgaataatgtaatctctcgatttgaatgaatgaatat 8027907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 12059715 - 12059562
Alignment:
Q  14 atattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| ||||||||| |||  |||  ||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | ||| |     
T  12059715 atattccggtcactttaattttatcatatttttttgtaggaattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 12059616  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| ||||||||||  |||||| |  |||||||||||| |||||    
T  12059615 tacgtttttagcggtgttgaatgatataatctcttgatttaaatgaatgaatat 12059562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 12653079 - 12653232
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||| |||||||| |||||||| | ||| ||  |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | ||| |     
T  12653079 atattccggtcgctttaattttatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctg 12653178  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||||||||||| |||||    
T  12653179 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 12653232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 20226001 - 20226097
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttg 131  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   | |||| ||||| || ||||| | ||||| || ||||||||||||||||    
T  20226001 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcgatgttg 20226097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 131
Target Start/End: Original strand, 22119985 - 22120081
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttg 131  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   | |||| ||||| || ||||| | ||||| || ||||||||||||||||    
T  22119985 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtattgtgagtttgttcgcaaattcatcatttatgtttttagcgatgttg 22120081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 25064381 - 25064524
Alignment:
Q  24 cactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttta 122  Q
    ||||||||||  ||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | ||| | ||||||||||    
T  25064381 cactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgttttta 25064480  T
Q  123 gcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||| |||||||||| ||||||| || |||| ||||||| |||||    
T  25064481 gcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 25064524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 33110746 - 33110869
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| |||||||||||| | | ||| |     
T  33110746 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttatttgcatattcatcctt 33110845  T
Q  113 tacgtttttagcgatgttgaatga 136  Q
    ||||||||| ||  ||||||||||    
T  33110846 tacgtttttggcagtgttgaatga 33110869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 4088595 - 4088748
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || || ||||||||  ||| ||| ||||| || ||| | | ||| |     
T  4088595 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgccattaacttggatgctgtgagtttgttcgcagattcatcctt 4088694  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| ||||||||||  |||||| ||||||| ||||||| |||||    
T  4088695 tacgtttttagcggtgttgaatgaaataatctctcaatttgaatgaatgaatat 4088748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 16419293 - 16419446
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||  || ||||||||||| | |||||| ||||| || ||| | | ||| |     
T  16419293 atattccggtgactttaattttatcatatatttttgtaggcattatgccgtcatatgctattaacttgattgttgtgagtttgttcgcagattcatcttt 16419392  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||| ||| |||||    
T  16419393 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaataaatgaatat 16419446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 8196349 - 8196195
Alignment:
Q  14 atattccagtcactttaattgtatc--atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcat 111  Q
    ||||||| |||||||||||| ||||  ||||| ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||| | || ||||| | ||| |    
T  8196349 atattccggtcactttaattttatcgcatatt-tttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtgtgttcgcaaattcatcct 8196251  T
Q  112 ctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
     ||| ||||||||| |||||||||| ||||||| || |||| ||||||| ||||||    
T  8196250 ttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatatt 8196195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 8497102 - 8497256
Alignment:
Q  14 atattccagtcactttaattgtatcatat--tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcat 111  Q
    ||||||| ||||||||||||  |||||||  | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |    
T  8497102 atattccggtcactttaatttcatcatatattttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcct 8497201  T
Q  112 ctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
     ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  8497202 ttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 8497256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 30608455 - 30608360
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||  ||||||| |||||||||||  ||||||| || || |||||||| | ||| | |||||||||| |||||||    
T  30608455 tatcatattatttgtaggcattttaccgttgtatgctattaacttggatgttgtgagattgtttgcaaattcatcctttacgtttttaacgatgtt 30608360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 90
Target Start/End: Complemental strand, 3688777 - 3688715
Alignment:
Q  28 ttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaa 90  Q
    |||||| | |||||||||||||||| |||||  ||||||| ||||||| ||||||||||||||    
T  3688777 ttaattttgtcatattatttatagatattttaccgttgtatgctattatcttaaatgttgtaa 3688715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 30 - 76
Target Start/End: Complemental strand, 31852138 - 31852092
Alignment:
Q  30 aattgtatcatattatttatagacattttgtcgttgtacgctattaa 76  Q
    |||| |||||||||||||||||||||||||| |||||| ||||||||    
T  31852138 aattttatcatattatttatagacattttgttgttgtatgctattaa 31852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 22 - 167
Target Start/End: Complemental strand, 33740512 - 33740366
Alignment:
Q  22 gtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttt 120  Q
    |||||||||||| |||||||| | ||||||| |||| || |||| || |||||||||||  ||  ||| ||||| || ||| | | ||| | ||||||||    
T  33740512 gtcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttggataatgtgagtttgttcgcagattcatcctttacgtttt 33740413  T
Q  121 tagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
    ||||  |||||||||| ||||||| |  |||||||||||| ||||||    
T  33740412 tagcagtgttgaatgatgtaatctcttgatttaaatgaatgaatatt 33740366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 7875886 - 7875833
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||||||||||| |||||    
T  7875886 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 7875833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 28634955 - 28634902
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  28634955 tacgtttttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatat 28634902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 67941 - 67897
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||    
T  67941 tatcatattatttataggcattttgccgttgtatgctattaactt 67897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 7976109 - 7975994
Alignment:
Q  53 cattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--atgacgtaatctatcaat 150  Q
    ||||||| ||||||| ||||||||||||  |||||| ||||| || ||| | | ||| | || ||||||||| |||||||   ||| ||| |||||||||    
T  7976109 cattttgccgttgtatgctattaacttaggtgttgtgagtttgttcgcatattcatcctttatgtttttagcaatgttgattctgatgtattctatcaat 7976010  T
Q  151 ttaaatgaataaatat 166  Q
    |||||||||| |||||    
T  7976009 ttaaatgaatgaatat 7975994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 79
Target Start/End: Complemental strand, 30879681 - 30879614
Alignment:
Q  12 gaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    |||||||| ||||| ||||||| ||||||||||||||| |  ||||||||||| || | |||||||||    
T  30879681 gaatattcaagtcattttaattttatcatattatttattggtattttgtcgttatatgttattaactt 30879614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 16 - 173
Target Start/End: Complemental strand, 24590635 - 24590475
Alignment:
Q  16 attccagtcactttaattgtatcatattatt---tatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||| ||||||||||| ||| ||||||||   ||||||||||||  |||||||  || ||| ||| ||| || | ||||| ||  |||| | ||  |     
T  24590635 attccaatcactttaattttattatattattatttatagacatttttccgttgtatactgttaccttgaattttttgagtttgttgacaaattcattctt 24590536  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgattta 173  Q
    |||||||||||||| ||| |||||| || || |||||| | ||||||||||||||| ||||    
T  24590535 tacgtttttagcgacgttcaatgacatattcaatcaatatgaatgaataaatattgtttta 24590475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 7880944 - 7880891
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  7880944 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 7880891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 34489436 - 34489489
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| | |||||| | |||||||||| |||| |||||||||||||    
T  34489436 tacgtttttagcggttttgaataatgtaatctatcgatttgaatgaataaatat 34489489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 35086294 - 35086249
Alignment:
Q  22 gtcactttaattgtatcatattatttatagacattttgtcgttgta 67  Q
    |||||||||| ||||||||||||||| ||| |||||||| ||||||    
T  35086294 gtcactttaagtgtatcatattatttgtaggcattttgttgttgta 35086249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 546182 - 546278
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||| ||||    
T  546182 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctatacgtttttagcgatattga 546278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 9341591 - 9341547
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||| ||| ||| ||||||||||||||| |||||||||||    
T  9341591 tatcatattgtttgtaggcattttgtcgttgtatgctattaactt 9341547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 21426622 - 21426582
Alignment:
Q  39 atattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||| ||||||||||| ||||||| |||||||||||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaactt 21426582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 25337701 - 25337853
Alignment:
Q  15 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    |||||||||||| |||||| |||||||| | ||| ||| |||| | | ||| || | ||||||||| |||| ||||||||| || ||| | | ||||| |    
T  25337701 tattccagtcaccttaattttatcatatatttttgtaggcattatattgttatatgatattaacttgaatggtgtaagtttgttcgcacattcatcattt 25337800  T
Q  114 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |  |||||||   |||| ||||| ||| ||||| ||||| |||||||||||||    
T  25337801 atatttttagtagtgttaaatgatgtactctattaatttgaatgaataaatat 25337853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 29743147 - 29743179
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgta 67  Q
    ||||||||||||||||| |||||||||||||||    
T  29743147 tatcatattatttataggcattttgtcgttgta 29743179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 33053108 - 33053064
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  33053108 tatcatattatttgtaggcattttgccgttgtatgctattaactt 33053064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 6e-38; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 15 - 179
Target Start/End: Complemental strand, 43369714 - 43369550
Alignment:
Q  15 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatcta 114  Q
    ||||| ||||||||||||| ||||||||||||||||| ||||||| ||||||| | |||||||||  ||| ||||||||| ||| |||| ||||| | ||    
T  43369714 tattctagtcactttaattttatcatattatttataggcattttgccgttgtatgatattaacttgtatgatgtaagtttgtttacaaatttatccttta 43369615  T
Q  115 cgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgatttaattttg 179  Q
    |||||| |||||| |||||||| ||||||||||||||||||||||| ||||| | |||| |||||    
T  43369614 cgttttcagcgatattgaatgatgtaatctatcaatttaaatgaatgaatatcgttttatttttg 43369550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 7640709 - 7640564
Alignment:
Q  22 gtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttt 120  Q
    ||||||||||||  ||||||| | ||||||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | ||||| ||||||||    
T  7640709 gtcactttaatttcatcatatatttttataggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcatttacgtttt 7640610  T
Q  121 tagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  7640609 tagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 7640564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 34773846 - 34773999
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||||||||||||||||  ||||||| | ||| ||| |||| | ||||| ||  ||||||||||  ||| ||| ||||| |||||| | ||||| |     
T  34773846 atattccagtcactttaatttcatcatatatttttgtaggcattatatcgttatatactattaacttggatgctgtgagtttgtttgcagatttatcctt 34773945  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  34773946 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 34773999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 2843183 - 2843030
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||||||| || ||||||| |||| ||| ||| ||||| ||  || | | ||| |     
T  2843183 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattagcttagatgctgtgagtttgttcacatattcatcctt 2843084  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  2843083 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 2843030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 20083474 - 20083626
Alignment:
Q  15 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    |||||| ||||||||| || |||||||| | ||| ||| |||| ||||||| ||||||||||||||  ||||| | ||||| || ||| | | ||||| |    
T  20083474 tattccggtcactttagttttatcatatatttttgtaggcattatgtcgttatacgctattaactttgatgttattagtttgttcgcagattcatcattt 20083573  T
Q  114 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    || ||| |||||||||| ||||| ||| | |||| |||| |||||||||||||    
T  20083574 acatttgtagcgatgttaaatgatgtactatatcgatttgaatgaataaatat 20083626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 26583842 - 26583998
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaactta-aatgttgtaagtttatttgcaaaattatc 109  Q
    ||||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  |||| ||| || ||||| ||| | | |||    
T  26583842 gaatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaactttgaatgctgtgagcttattcgcagattcatc 26583941  T
Q  110 atctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
     | |||||||||| ||||||||||||| |||||||  | |||| ||||||| |||||    
T  26583942 ctttacgtttttaacgatgttgaatgatgtaatctcacgatttgaatgaatgaatat 26583998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 433635 - 433480
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| || ||||||||| |||||||| | ||| ||| |||| ||  ||| || |||||||||||  ||||||| ||||| || ||| | | |||     
T  433635 gaatattccggtgactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcc 433536  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  433535 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 433480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 9977150 - 9977097
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgt 88  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||  |||||||    
T  9977150 tatcatattatttttagacattttgtcgttgtatgctattaacttggatgttgt 9977097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 26492500 - 26492653
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||| ||| || |||||||||||  ||| ||| ||||| ||  || | | ||| |     
T  26492500 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcacagattcatcttt 26492599  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  26492600 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 26492653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 35261433 - 35261585
Alignment:
Q  15 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    |||||| |||||||||||| |||||||| | ||| ||| |||| || ||||||| |||||||||||  || |||| ||||| || ||| | | ||| | |    
T  35261433 tattccggtcactttaattttatcatatatttttgtaggcattatgccgttgtatgctattaacttggatattgtgagtttgttcgcagattcatccttt 35261532  T
Q  114 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | |||||||| | |||| ||||| ||| ||||||||||| ||||||| |||||    
T  35261533 atgtttttagtggtgttaaatgatgtactctatcaatttgaatgaatgaatat 35261585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 13796869 - 13796810
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||  ||||||| |||||    
T  13796869 tatcatattatttgtaggcattttgtcgttgtatgctattaacttggatgttgtgagttt 13796810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 28407858 - 28407763
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||  ||| ||| ||||| || ||| | ||| | | || |||||||||||||||    
T  28407858 tatcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagatttaccctttatgtttttagcgatgtt 28407763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 166
Target Start/End: Complemental strand, 34899547 - 34899413
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt-gaa 133  Q
    ||||||||||||| ||  ||||||| ||||||| |||||||||||  ||||||| ||||| || ||| | | | | | |||||||||||||||||| | |    
T  34899547 tatcatattatttgtatgcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgta 34899448  T
Q  134 t--gacgtaatctatcaatttaaatgaataaatat 166  Q
    |  || ||| ||||||||||| |||||||||||||    
T  34899447 tttgatgtactctatcaatttgaatgaataaatat 34899413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 47590462 - 47590557
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| |||||| | ||| | | |||||||| |||||||||    
T  47590462 tatcatattatttgtaggcattttgccgttgtaagctattaacttgggtgttgtgagtttgtttgcagatttaccctttacgttttcagcgatgtt 47590557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 6002218 - 6002316
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
    |||||||||||  ||| ||| ||||||||  || | ||||||| |||||||||| ||||||||||| | |||| ||||| |||| ||||||| ||||||    
T  6002218 gctattaacttggatgatgtgagtttattcacagatttatcatttacgtttttaacgatgttgaataatgtaacctatcgatttgaatgaatgaatatt 6002316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 93
Target Start/End: Complemental strand, 30756759 - 30756701
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtt 93  Q
    ||||||||||||||||| |||||||||||| || ||| ||||||||  |||||||||||    
T  30756759 tatcatattatttataggcattttgtcgttttatgctgttaacttaggtgttgtaagtt 30756701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 20116717 - 20116869
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| ||||| || | ||| ||| |||| ||||||  || |||||||||||  ||||||| ||||| ||  || | | |||||     
T  20116717 atattccggtcactttaattttatcaaatatttttgtaggcattatgtcgta-tatgctattaacttggatgttgtgagtttgttcacagattcatcatt 20116815  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| ||| |||||| ||||||| || |||| ||||||| |||||    
T  20116816 tacgtttttagcggtgtggaatgatgtaatctctcgatttgaatgaatgaatat 20116869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 23085656 - 23085809
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||| ||  ||  ||| ||||| || ||| | | ||| |     
T  23085656 atattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaatttggatactgtgagtttgttcgcagattcatcctt 23085755  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  23085756 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatcaatat 23085809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 23786710 - 23786863
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||  |||| ||| ||| || ||||| |||||| ||| ||| ||||| || ||| | | |||||     
T  23786710 atattcctgtcactttaattttatcatatatttttgtatgcattatgttgttatatgctatcaacttagatgctgtgagtttgttcgcagattcatcatt 23786809  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||  |||||||||| ||||||| || | || ||||||| |||||    
T  23786810 tacgtttttagctgtgttgaatgatgtaatctctctaattgaatgaatgaatat 23786863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 32684803 - 32684956
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||| || |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||||||||| || | | | | ||| |     
T  32684803 atattccggtcactttagttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtaagtttgttcgtagattcatcctt 32684902  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||| ||| || |||| ||||||| |||||    
T  32684903 tacgtttttagcggtgttgaatgatgtagtctctcgatttgaatgaatgaatat 32684956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 45198975 - 45198822
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||| ||| |||||||| | ||| |||  ||| ||||||| ||  ||||||||||  ||||||| ||| | || ||| | | ||| |     
T  45198975 atattccggtcactttgattttatcatatatttttgtaggtattatgtcgttatatactattaacttggatgttgtgagtatgttcgcagattcatcctt 45198876  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  45198875 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 45198822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 8001486 - 8001442
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||||||| ||||||| ||||||| |||||||||||    
T  8001486 tatcatattatttataggcattttgccgttgtatgctattaactt 8001442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 28044696 - 28044652
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||    
T  28044696 tatcatattatttttagacattttgccgttgtatgctattaactt 28044652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 35665075 - 35664940
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga-- 132  Q
    ||||||||||||| | | ||||||||||||||| |||||||||||   |  ||| ||||| ||  || | || || | ||||||||||||||||||||      
T  35665075 tatcatattattttttggcattttgtcgttgtatgctattaacttgggtactgtgagtttgttcacagatttctcctttacgtttttagcgatgttgatt 35664976  T
Q  133 atgacgtaatctatcaatttaaatgaataaatattg 168  Q
     | | ||| ||| |||||||||||||||||||||||    
T  35664975 ctaatgtattctctcaatttaaatgaataaatattg 35664940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 164
Target Start/End: Original strand, 36143910 - 36144030
Alignment:
Q  44 atttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatc 143  Q
    |||| |||||||| ||||||| ||  ||||||||||  ||| ||| |||| ||| ||| | | || || || |||||||||| |||||||||| ||| ||    
T  36143910 atttgtagacattatgtcgttatatactattaacttggatggtgtgagttaattagcagattcattatttatgtttttagcggtgttgaatgatgtactc 36144009  T
Q  144 tatcaatttaaatgaataaat 164  Q
    |||||||||  ||||||||||    
T  36144010 tatcaatttggatgaataaat 36144030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 22 - 78
Target Start/End: Complemental strand, 46244205 - 46244149
Alignment:
Q  22 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaact 78  Q
    |||||||||||| ||||||||||||| ||| ||||||||| ||||| | ||||||||    
T  46244205 gtcactttaattttatcatattatttgtaggcattttgtcattgtatgttattaact 46244149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 48316752 - 48316708
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  48316752 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 48316708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 23425221 - 23425162
Alignment:
Q  107 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||| |||||||||||||||||||||| | ||||||| | ||||| ||||||| |||||    
T  23425221 atcatttacgtttttagcgatgttgaataatgtaatctcttaatttgaatgaatgaatat 23425162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 25255382 - 25255437
Alignment:
Q  39 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    |||| |||| ||| ||||||||||||||| |||||||||||| ||||||| |||||    
T  25255382 atatcatttgtaggcattttgtcgttgtatgctattaacttagatgttgtgagttt 25255437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 40993308 - 40993442
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt-gaa 133  Q
    ||||||||||||| ||| ||||||||||||||| | |||||||||   |||||| ||||| || ||| | | | | | |||||||||||||||||| | |    
T  40993308 tatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtttgta 40993407  T
Q  134 t--gacgtaatctatcaatttaaatgaataaatat 166  Q
    |  || ||| |||||| |||||||||||| |||||    
T  40993408 tctgatgtactctatcgatttaaatgaatgaatat 40993442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 46822148 - 46822303
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    |||||||||  |||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | |||     
T  46822148 gaatattccgatcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcc 46822247  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||| | |||||||||| ||||||| || |||| ||||||| |||||    
T  46822248 tttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaattaatat 46822303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 17611629 - 17611679
Alignment:
Q  116 gtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||| ||||||||||| ||| ||||||||||| ||||||| |||||    
T  17611629 gtttttagcaatgttgaatgatgtactctatcaatttgaatgaatgaatat 17611679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 167
Target Start/End: Complemental strand, 21609511 - 21609457
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
    |||| ||||| |||||||||||||  || |||||| |||||||||||||||||||    
T  21609511 tacgcttttatcgatgttgaatgatatactctatctatttaaatgaataaatatt 21609457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 1485098 - 1485045
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  1485098 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 1485045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 4999974 - 4999937
Alignment:
Q  30 aattgtatcatattatttatagacattttgtcgttgta 67  Q
    |||| |||||||||||||||||||||||| ||||||||    
T  4999974 aattttatcatattatttatagacattttttcgttgta 4999937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Original strand, 11343964 - 11344057
Alignment:
Q  39 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    ||||||||| |||  ||||||  |||||| ||||||||||||  |||  ||||||| | |||| | | ||||| ||||||||||||||||||||    
T  11343964 atattatttgtaggtattttgatgttgtatgctattaacttaggtgtcttaagtttgtatgcagattcatcatttacgtttttagcgatgttga 11344057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 42066904 - 42066851
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  42066904 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 42066851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 24069334 - 24069290
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| |||||| |||||||| |||||||||||    
T  24069334 tatcatattatttgtaggcattttatcgttgtatgctattaactt 24069290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 39171530 - 39171486
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  39171530 tatcatattatttgtaggcattttgccgttgtatgctattaactt 39171486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 48061573 - 48061617
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  48061573 tatcatattatttgtaggcattttgccgttgtatgctattaactt 48061617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 49148075 - 49148011
Alignment:
Q  15 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||| ||||  ||| |||||||||| || | | ||||||||||||||| |||||||||||    
T  49148075 tattccagtgacttggattttatcatattaattgttggcattttgtcgttgtatgctattaactt 49148011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 3e-30; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 22 - 161
Target Start/End: Original strand, 36184687 - 36184826
Alignment:
Q  22 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttt 121  Q
    |||||||| ||| ||||||| ||||| ||| ||||||||||||||| |||||||||||  ||||||| ||||| |||| |||| |||  | |||||||||    
T  36184687 gtcactttgattttatcatactatttctaggcattttgtcgttgtatgctattaacttggatgttgtgagtttgtttgtaaaactattctttacgttttt 36184786  T
Q  122 agcgatgttgaatgacgtaatctatcaatttaaatgaata 161  Q
    ||| ||||||||||| ||| ||||||||||||||||||||    
T  36184787 agcaatgttgaatgatgtactctatcaatttaaatgaata 36184826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 9528819 - 9528666
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || ||||||||||| |||||||| ||||| || ||| | | ||| |     
T  9528819 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttgaatgttgtgagtttgttcgcagattcatcctt 9528720  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  9528719 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 9528666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 4821064 - 4821217
Alignment:
Q  15 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaa-cttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    |||| |||||||||||||| ||||||||||||| |||||||||| |||||||| |  |||||   || || |||| | ||||||  || | | ||||| |    
T  4821064 tatttcagtcactttaattttatcatattatttgtagacattttatcgttgtatgtaattaataatagatattgtgattttattcacatattcatcattt 4821163  T
Q  114 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
    | ||||||||||||  ||| ||| |||||||||| |||||||||||||||||||    
T  4821164 atgtttttagcgatactgattgatgtaatctatccatttaaatgaataaatatt 4821217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 25274030 - 25274183
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||  ||| || |||||||||||| ||||||| ||||| || ||| | | ||| |     
T  25274030 atattccggtcactttaattttatcatatatttttgtaggcattatgctgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcctt 25274129  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  25274130 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 25274183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 38706644 - 38706499
Alignment:
Q  22 gtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttt 120  Q
    |||||||||||| |||||||| | ||| |||||||| ||||||| || |||||||||||  ||| ||| ||||| || ||| | | ||| | ||||||||    
T  38706644 gtcactttaattttatcatatatttttgtagacattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcttttacgtttt 38706545  T
Q  121 tagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  38706544 tagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 38706499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 50766454 - 50766301
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||  ||| || ||||||||||| |||| ||| ||||| || | | | | ||||||    
T  50766454 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttgaatgctgtgagtttgttcgtagattcatcatc 50766355  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||||||||||| |||||    
T  50766354 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 50766301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 12265610 - 12265761
Alignment:
Q  15 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    ||||||| ||||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| ||  || | | ||||| |    
T  12265610 tattccaatcactttaattttatcatatatttttttaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcacagattcatcat-t 12265708  T
Q  114 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||    
T  12265709 acgtttttagcgatgttgaatgatgtaacctatcgatttgaatgaatgaatat 12265761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 44947559 - 44947706
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || | |||||||||  ||||||| ||||| || ||| | | ||| |     
T  44947559 atattccggtcactttaattttatcatatatttttgtaggcattgtgccgttatatgttattaacttggatgttgtgagtttgttcgcagattcatcctt 44947658  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 160  Q
    ||||||||||||| |||||||||| ||||||| || ||||||||||||    
T  44947659 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaat 44947706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 49072707 - 49072632
Alignment:
Q  13 aatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgt 88  Q
    ||||||||| ||||||| ||| |||| |||||||| |||||||||| | |||||| ||||||||||||||||||||    
T  49072707 aatattccaatcactttcattttatcgtattatttgtagacattttattgttgtatgctattaacttaaatgttgt 49072632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 51318132 - 51318285
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| ||  || | | ||| |     
T  51318132 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcacagattcatcctt 51318231  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||  |||||||||| ||||||| || |||||||||||| |||||    
T  51318232 tacgtttttagcagtgttgaatgatgtaatctctcgatttaaatgaatgaatat 51318285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 166
Target Start/End: Complemental strand, 46991064 - 46990920
Alignment:
Q  23 tcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttt 121  Q
    ||||||||||| |||||||| | ||| ||| |||| ||||||| || ||| ||||||| |||||||| ||||| || ||| | | ||||| |||||||||    
T  46991064 tcactttaattttatcatatatttttgtaggcattatgtcgttctatgctgttaacttgaatgttgtgagtttgttcgcagattcatcatttacgttttt 46990965  T
Q  122 agcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    || |  ||||||||| ||| |||||| |||| ||||||| |||||    
T  46990964 agtggcgttgaatgatgtactctatcgatttgaatgaatgaatat 46990920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 24 - 166
Target Start/End: Original strand, 1532065 - 1532208
Alignment:
Q  24 cactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttta 122  Q
    |||||||||| |||||||| | ||| |||||||| || |||| || |||||||||||  ||||||| || || || ||| | | ||| | || |||||||    
T  1532065 cactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagcttgttcgcagattcatcctttatgttttta 1532164  T
Q  123 gcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||| |||||||||||||||||| || |||| ||||||| |||||    
T  1532165 gcggtgttgaatgacgtaatctctcgatttgaatgaatgaatat 1532208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 4644003 - 4644158
Alignment:
Q  12 gaatattccagtcactttaattgtatcatattat-ttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| |||| ||||||| ||||||||  | || ||| |||| || |||| || |||||||||||  ||||||| || || || ||| | | |||     
T  4644003 gaatattccggtcaatttaattttatcatatattattgtaggcattatgccgttatatgctattaacttggatgttgtgagcttgttcgcagattcatcc 4644102  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | |||||||||||||||||||||||| ||||||| || |||| ||||||| |||||    
T  4644103 tttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatat 4644158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 127
Target Start/End: Original strand, 27652113 - 27652204
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgat 127  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||| | |||||| ||||| || ||| | | ||| | |||||||||||||||    
T  27652113 atcatattatttgtagacattttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcctatacgtttttagcgat 27652204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 10359490 - 10359338
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||||||||||||| || |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||||| | ||| |     
T  10359490 atattccagtcactttatttttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcaaattcatctt- 10359392  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || ||||  |||||| |||||    
T  10359391 tacgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaatat 10359338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 42032469 - 42032372
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    ||||||||||||  ||| ||||||| ||||||| ||||||||||| |||||||| ||||| |||||||| ||  | | || ||||||| |||||||||    
T  42032469 tatcatattattggtagccattttgccgttgtatgctattaacttgaatgttgtgagtttgtttgcaaatttcacctttatgtttttaacgatgttga 42032372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 161
Target Start/End: Complemental strand, 37188537 - 37188389
Alignment:
Q  14 atattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| ||||  ||| |||| |||| || || |||||||||||  ||| ||| ||| | || ||| | ||||| |     
T  37188537 atattcctgtcactttaattttatcatataattttgtaggcattgtgtcattatatgctattaacttggatgctgtgagtgtgttcgcagatttatcttt 37188438  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 161  Q
    | ||||||||||| |||||||||| ||||||| || |||| ||||||||    
T  37188437 tgcgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaata 37188389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 22 - 85
Target Start/End: Original strand, 26123416 - 26123479
Alignment:
Q  22 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgt 85  Q
    |||||||||||| ||||||||||||| |||| || |||| |||||| ||||||||||| |||||    
T  26123416 gtcactttaattttatcatattatttgtagatatattgttgttgtatgctattaacttgaatgt 26123479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 43444537 - 43444692
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||| || |||| ||| ||||| || ||| | | |||     
T  43444537 gaatattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaatttgaatgctgtgagtttgttcgcagattcatcc 43444636  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | |||||| ||| || |||||||||| ||||||| ||||||| ||||||| |||||    
T  43444637 tttacgttcttaacggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 43444692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 168
Target Start/End: Complemental strand, 3336093 - 3335951
Alignment:
Q  27 tttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcg 125  Q
    ||||||| |||||||| ||||| ||| ||||  | |||| || |||| |||||| |||||| | ||||| |||||| | | ||| | |||||||||||||    
T  3336093 tttaattttatcatatatatttgtaggcattacgccgttatatgctaataacttgaatgttttgagtttgtttgcagattcatcctttacgtttttagcg 3335994  T
Q  126 atgttgaatgacgtaatctatcaatttaaatgaataaatattg 168  Q
     |||||||||| ||| |||||  |||| ||||||| |||||||    
T  3335993 gtgttgaatgatgtactctattgatttgaatgaatgaatattg 3335951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 167
Target Start/End: Complemental strand, 9645466 - 9645312
Alignment:
Q  14 atattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| ||||||||  |||  |||  ||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  9645466 atattccggtcactttaattttatcatatacttttgtaggtattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 9645367  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
    ||||||||| ||| |||||||||| ||||||| || |||| ||||||||||||||    
T  9645366 tacgttttttgcggtgttgaatgatgtaatctctcgatttgaatgaataaatatt 9645312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 21090287 - 21090428
Alignment:
Q  12 gaatattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| |||||||||||| |||||| |  |||  ||| |||| ||||||| || | |||||||||  ||  ||| ||||| |||||| | | |||     
T  21090287 gaatattccggtcactttaattttatcatctacttttgtaggcattatgtcgttatatgttattaacttggatagtgtgagtttgtttgcagattcatcc 21090386  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaattt 152  Q
    | ||||||||||||| |||||||||| ||||||| |||||||    
T  21090387 tttacgtttttagcggtgttgaatgatgtaatctctcaattt 21090428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 62 - 167
Target Start/End: Original strand, 29966522 - 29966627
Alignment:
Q  62 gttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 161  Q
    |||||| |||||||||||  ||||||| ||||| || ||| | | ||| | |||||||||| ||||||||||||| ||||| | |  ||||||||||||     
T  29966522 gttgtatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttaacgatgttgaatgatgtaatttcttgatttaaatgaatg 29966621  T
Q  162 aatatt 167  Q
    ||||||    
T  29966622 aatatt 29966627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 34024380 - 34024227
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||| ||||||| |||||||| | ||| ||  |||| ||| ||| || |||||||||||  ||||||| ||||| || ||| | | ||| |     
T  34024380 atattccggtcattttaattttatcatatatttttgtaagcattatgttgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 34024281  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||  ||||||| || |||| ||||||| |||||    
T  34024280 tacgtttttagcggtgttgaatggtgtaatctctcgatttgaatgaatgaatat 34024227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 53616592 - 53616439
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  || |||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  53616592 atattccggtcactttaatttcattatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctt 53616493  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  53616492 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 53616439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 6155163 - 6155119
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  6155163 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 6155119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 9178522 - 9178566
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  9178522 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 9178566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 161
Target Start/End: Original strand, 47417809 - 47417957
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||||| |||||||||||  ||||||| | ||| ||| |||| || |||| || | ||||||||| |||| ||| ||||| ||  || | | ||| |     
T  47417809 atattccattcactttaatttcatcatatatttttgtaggcattatgccgttatatgttattaacttgaatgctgtgagtttgttcacagattcatcctt 47417908  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 161  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||||    
T  47417909 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaata 47417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 56040586 - 56040542
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  56040586 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 56040542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 7008934 - 7008871
Alignment:
Q  30 aattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtt 93  Q
    |||| ||||||||||||| | ||||||||| ||||||| ||||||||||||  |||||| ||||    
T  7008934 aattttatcatattatttgtggacattttgccgttgtatgctattaacttaggtgttgtgagtt 7008871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 9284056 - 9284211
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||| ||||||||||||||  ||||||| | ||| ||| |||| || |||| || ||||||| | |  ||||||| ||||| || | | | | |||     
T  9284056 gaatatttcagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattatcatggatgttgtgagtttgttcgtagattcatct 9284155  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  9284156 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 9284211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 29120319 - 29120276
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaact 78  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||    
T  29120319 tatcatattatttgtaggcattttgtcgttgtatgctattaact 29120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 43153956 - 43153806
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || ||| |||||||  ||||||| ||||| || |   | | ||| |     
T  43153956 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctgttaacttggatgttgtgagtttgttcg---attcatcctt 43153860  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||||| |||||||| | ||||| || |||| |||||||||||||    
T  43153859 tacgtttttagcgatattgaatgatgcaatctctcgatttgaatgaataaatat 43153806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 43318228 - 43318153
Alignment:
Q  13 aatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgt 88  Q
    |||||| | |||||||||||| ||||| |||||||||||  ||||||||  | || ||||||||||| ||||||||    
T  43318228 aatatttcggtcactttaattttatcacattatttataggtattttgtcactttatgctattaactttaatgttgt 43318153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 45227985 - 45227830
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| |||||||||||| |||||||| | ||| | | |||| ||  ||| || | |||||||||  ||||||| ||||| || | | | | |||     
T  45227985 gaatattccggtcactttaattttatcatatatttttgtgggcattatgcggttatatgttattaacttggatgttgtgagtttgttcgtagattcatcc 45227886  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  45227885 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 45227830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 22305561 - 22305511
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgt 85  Q
    ||||||||||||| |||  |||||||||||||| ||||||||||| |||||    
T  22305561 tatcatattatttgtaggtattttgtcgttgtatgctattaacttgaatgt 22305511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 31381558 - 31381512
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 159  Q
    |||||||||||||||||||||||| ||||||| || |||| ||||||    
T  31381558 tacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaa 31381512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 94
Target Start/End: Original strand, 36194878 - 36194936
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||  ||||||| |||||    
T  36194878 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagttt 36194936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 37684026 - 37684088
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatt 97  Q
    ||||||||||||| | ||||||||||||||||  ||||||||| ||  |||||| ||||||||    
T  37684026 tatcatattatttgttgacattttgtcgttgtgtgctattaacctaggtgttgtgagtttatt 37684088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 77
Target Start/End: Original strand, 45418681 - 45418723
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaac 77  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||    
T  45418681 tatcatattatttgtaggcattttgtcgttgtatgctattaac 45418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 167
Target Start/End: Original strand, 49680777 - 49680831
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
    ||||||||||||| |||||||||| |||| || || |||||||||||| ||||||    
T  49680777 tacgtttttagcggtgttgaatgatgtaacctctcgatttaaatgaatgaatatt 49680831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 20569504 - 20569557
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  20569504 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 20569557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 21365075 - 21364950
Alignment:
Q  27 tttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 126  Q
    ||||||| |||||||||| || |  |||||||||||||||| | || ||||||  | || || ||||| || ||||| | ||| | | | |||||| |||    
T  21365075 tttaattttatcatattagttgtcaacattttgtcgttgtatgatactaacttggaagtcgtgagtttgttcgcaaactcatcctttccatttttaacga 21364976  T
Q  127 tgttgaatgacgtaatctatcaattt 152  Q
    | |||||||| |||||||||||||||    
T  21364975 tcttgaatgatgtaatctatcaattt 21364950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 39 - 132
Target Start/End: Complemental strand, 31891223 - 31891130
Alignment:
Q  39 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    ||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| || ||||| | | | | ||||||||||||||| ||||    
T  31891223 atattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctatacgtttttagcgatattga 31891130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 19853452 - 19853408
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  19853452 tatcatattatttctaggcattttgccgttgtatgctattaactt 19853408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 32766683 - 32766727
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| |||| |||||||||| |||||||||||    
T  32766683 tatcatattatttgtaggcattatgtcgttgtatgctattaactt 32766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 37465651 - 37465695
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||  ||||||||||||||| |||||||||||    
T  37465651 tatcatattatttgtaagcattttgtcgttgtatgctattaactt 37465695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 47320352 - 47320308
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  47320352 tatcatattatttgtaggcattttgccgttgtatgctattaactt 47320308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 53811197 - 53811241
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  53811197 tatcatattatttgtaggcattttggcgttgtatgctattaactt 53811241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 3e-24; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 27949565 - 27949718
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||||||||||||||||| |||||||| | |||||||||||| || ||||||| |||||||||||  ||||||| ||||| || | | | | |||||     
T  27949565 atattccagtcactttaattttatcatatatttttatagacattatgacgttgtatgctattaacttggatgttgtgagtttgttcggagattcatcatt 27949664  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| ||||||||||  |||| | || |||||||||||| |||||    
T  27949665 tacgtttttagcggtgttgaatgatataatatctcgatttaaatgaatgaatat 27949718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 8806005 - 8806158
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| ||||||| |||| || |||||||||||  ||||||| || || || ||| | | ||| |     
T  8806005 atattccggtcactttaattttatcatatatttttgtaggcattttgccgttatatgctattaacttggatgttgtgagattgttcgcagattcatcctt 8806104  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||||||||||||||| ||||||| || |||| ||||||| |||||    
T  8806105 tacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatat 8806158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 35 - 166
Target Start/End: Complemental strand, 30923395 - 30923264
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaat 134  Q
    ||||||||||||||||| ||||||   |||||| | ||||||||| |||||||||||||| || ||| | | || || |||| ||||||| ||||| |||    
T  30923395 tatcatattatttatagtcatttttatgttgtatgatattaacttgaatgttgtaagtttgttcgcagattcattatttacgattttagcaatgttaaat 30923296  T
Q  135 gacgtaatctatcaatttaaatgaataaatat 166  Q
    || ||| ||||||||||| ||||||| |||||    
T  30923295 gatgtactctatcaatttgaatgaatgaatat 30923264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 9986283 - 9986131
Alignment:
Q  15 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    |||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | ||| | |    
T  9986283 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccttt 9986184  T
Q  114 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||| |||||||||| ||||||| || ||||  |||||| |||||    
T  9986183 acgtttttagcggtgttgaatgatgtaatctctcgatttggatgaatgaatat 9986131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 15690539 - 15690694
Alignment:
Q  12 gaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca- 110  Q
    |||||||  ||||||||||||  ||||||||||||| || | ||||||  |||||| | | |||| || |||||||| ||||| || | | | ||||||     
T  15690539 gaatatttaagtcactttaatcttatcatattatttgtaaatattttggtgttgtatgttgttaatttgaatgttgtgagtttgttggtagatttatcaa 15690638  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | || ||||||||||||||||||||| ||||  ||||||||||||||||| |||||    
T  15690639 tttatgtttttagcgatgttgaatgatgtaacatatcaatttaaatgaatgaatat 15690694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 21570352 - 21570197
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    |||||||||  ||||||||||| |||||||| | ||| ||| |||| || ||||||| ||||||||||| |||| ||||||||| || ||| | | | |     
T  21570352 gaatattccgttcactttaattttatcatatatttttgtaggcattatgccgttgtatgctattaacttgaatgctgtaagtttgttcgcagattcagcc 21570253  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | || |||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  21570252 tttatgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 21570197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 4904086 - 4904027
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||  ||||||| |||||    
T  4904086 tatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgtgagttt 4904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 111
Target Start/End: Original strand, 7604336 - 7604411
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcat 111  Q
    ||||||||||| ||||||||||| || ||||| |||||||||||  ||||||||| ||| |||||||| |||||||    
T  7604336 atcatattattcatagacattttatcattgtatgctattaacttggatgttgtaaatttgtttgcaaacttatcat 7604411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 71 - 166
Target Start/End: Complemental strand, 41712673 - 41712578
Alignment:
Q  71 tattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||| || |||| ||||| || ||| | ||||||| ||| ||||||| |||||||||||| ||||| | ||||||||||||||| |||||    
T  41712673 tattaacttatatattgtgagtttgttcgcagatttatcatttacatttttagtgatgttgaatgatgtaatttttcaatttaaatgaatgaatat 41712578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 160
Target Start/End: Original strand, 10548333 - 10548470
Alignment:
Q  22 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttt 121  Q
    |||||||||||| | ||| ||||||||||| |||||||| |||||| | |||||||||  ||||||| ||||| ||| |||| | | ||| || | ||||    
T  10548333 gtcactttaattttctcaaattatttataggcattttgttgttgtatgttattaacttggatgttgtgagtttgtttacaaattgaccatttatg-tttt 10548431  T
Q  122 agcgatgttgaatgacgtaatctatcaatttaaatgaat 160  Q
    ||| |||||||||||  ||  |||||||| |||||||||    
T  10548432 agcaatgttgaatgatataccctatcaatataaatgaat 10548470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 41431178 - 41431320
Alignment:
Q  25 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 123  Q
    ||||||||| |||||||| | ||| ||| |||| || |||| ||  ||||||||||  ||||||| |||||||| ||| | ||||| | |||||||||||    
T  41431178 actttaattttatcatatatttttgtaggcattatgccgttatatactattaacttggatgttgtgagtttattcgcagatttatcctttacgtttttag 41431277  T
Q  124 cgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    || |||||||| | ||||||| || |||| ||||||| |||||    
T  41431278 cggtgttgaataatgtaatctctcgatttgaatgaatgaatat 41431320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 41694780 - 41694877
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaa 133  Q
    ||||||||||||||||| |||||||||||| || | |||||||||   |||| ||||||| ||  |||| | ||||| |||||||||||||||||||||    
T  41694780 tatcatattatttataggcattttgtcgttatatgttattaactttggtgtt-taagtttgttcacaaattcatcatttacgtttttagcgatgttgaa 41694877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 17249088 - 17248991
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    ||||||||||||| ||||||||||| ||||||| |||||||||||   || ||| ||||| || ||| | | ||||| ||||||||||||||| ||||    
T  17249088 tatcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcatttacgtttttagcgatcttga 17248991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 40625943 - 40625846
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||| |||||| | ||||| || ||| | | ||||| |||||||||||||||||||||||| ||||||| || |||| |||| || |||||    
T  40625943 gctattaacttgaatgttatgagtttgttcgcagattcatcatttacgtttttagcgatgttgaatgatgtaatctctcgatttgaatggatgaatat 40625846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 8971570 - 8971423
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| |||||||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  8971570 atattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgctgtgagtttgttcgcatattcatcctt 8971471  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 160  Q
    ||| || |||||| |||||||||| ||||||| || |||| |||||||    
T  8971470 tacattcttagcggtgttgaatgatgtaatctctcgatttgaatgaat 8971423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 11985174 - 11985079
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| |||||||  ||||||  ||||||||||  ||||||| | ||| || ||||| | ||||| ||||||||||||||||||    
T  11985174 tatcatattatttgtaggcattttgctgttgtatcctattaacttggatgttgtgaatttgttcgcaaattcatcatttacgtttttagcgatgtt 11985079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 20047026 - 20046871
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| || ||||||||| |||||||| | ||| ||| |||| ||||||| ||   |||||||||  ||| ||| | ||| || ||| | | |||     
T  20047026 gaatattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatcttattaacttggatgctgtgattttgttcgcagattcatcc 20046927  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||| |||||||||| ||||||| || |||||||||||| |||||    
T  20046926 tttacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 20046871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 1421835 - 1421901
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgca 101  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   |||||| ||||| ||||||    
T  1421835 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttgca 1421901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 4228261 - 4228415
Alignment:
Q  14 atattccagtcactttaattgt-atcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcat 111  Q
    |||||||  ||||||||||| | ||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | ||| |    
T  4228261 atattccgatcactttaatttttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcct 4228360  T
Q  112 ctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
     ||| ||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  4228361 ttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 4228415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 27249093 - 27248940
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||  |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | ||| |     
T  27249093 atattccggtcactttaatttcatcatatatttttgtacgcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 27248994  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| ||||||||||  |||||| || |||| ||||||| |||||    
T  27248993 tacgtttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatat 27248940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 44 - 165
Target Start/End: Complemental strand, 39284475 - 39284354
Alignment:
Q  44 atttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatc 143  Q
    |||| |||||||||| |||||||| | | ||||||| ||| || | ||||| || ||||| | || || ||  |||||| |||| |||||||| |||||     
T  39284475 atttgtagacattttatcgttgtatgttgttaacttgaatattatgagtttgttcgcaaattcattatttatatttttaacgatattgaatgatgtaata 39284376  T
Q  144 tatcaatttaaatgaataaata 165  Q
    ||||||||| ||||||||||||    
T  39284375 tatcaatttgaatgaataaata 39284354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 10237156 - 10237060
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||   |||||| ||||| || ||| | | | | | ||||||||||||||| ||||    
T  10237156 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttagcgatattga 10237060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 7677814 - 7677719
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| |||||||  | | | | ||||||||||||||||||    
T  7677814 tatcatattatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcaagttcaccttttacgtttttagcgatgtt 7677719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 101
Target Start/End: Original strand, 10929819 - 10929890
Alignment:
Q  30 aattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgca 101  Q
    |||| ||||||||||||||||| |||||||| |||| | |||||||||||  ||| ||| ||||| ||||||    
T  10929819 aattttatcatattatttataggcattttgttgttgaatgctattaacttggatgctgtgagtttgtttgca 10929890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 13719018 - 13718959
Alignment:
Q  107 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||| |||||||||||||||||||||||| | | ||||||| ||| ||||||| |||||    
T  13719018 atcatttacgtttttagcgatgttgaatgatgcactctatcattttgaatgaatgaatat 13718959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 24461603 - 24461745
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatg 135  Q
    |||||||| ||| |||  ||||||||||| || |||||||||||   |||||| ||||| || |||   | ||| | ||||||||||||||||||| ||     
T  24461603 atcatattttttgtaggtattttgtcgttatatgctattaactttggtgttgtgagtttgttcgcaggttcatcctttacgtttttagcgatgttg-att 24461701  T
Q  136 acgtaatctatcaatttaaatgaataaatattgatttaattttg 179  Q
    | ||| ||||||||||| ||||||| ||||| | |||| |||||    
T  24461702 atgtattctatcaatttgaatgaatgaatatcgttttatttttg 24461745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 28533895 - 28533836
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    ||||||||||||| |||  |||||||||||||| ||||||||||| | |||||| |||||    
T  28533895 tatcatattatttgtaggtattttgtcgttgtatgctattaacttgagtgttgtgagttt 28533836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 32448557 - 32448498
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||  ||||||| |||||    
T  32448557 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagttt 32448498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 19597998 - 19598095
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    ||||||||||||| ||||||||||  ||||||| ||||||||||| | |||||| | ||| || ||| | |  |||| ||||||||| || |||||||    
T  19597998 tatcatattatttgtagacattttaccgttgtatgctattaacttgagtgttgtgaatttgttcgcatattnttcatttacgttttttgcaatgttga 19598095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 63 - 101
Target Start/End: Original strand, 32190851 - 32190889
Alignment:
Q  63 ttgtacgctattaacttaaatgttgtaagtttatttgca 101  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  32190851 ttgtatgctattaacttaaatgttgtgagtttatttgca 32190889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 33229082 - 33229016
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaactt 79  Q
    |||||||||||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||    
T  33229082 atattccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaactt 33229016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 33760134 - 33760036
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaa 133  Q
    ||||||||||||| ||| |||||||  |||||| |||||||||||   || ||| ||||| ||| || | | ||| | |||||||||||||||||||||    
T  33760134 tatcatattatttgtaggcattttgctgttgtaagctattaacttgtgtgctgttagtttgtttacagactcatcctttacgtttttagcgatgttgaa 33760036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 7015553 - 7015500
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||  |||||||||| ||||||| || |||| |||||||||||||    
T  7015553 tacgtttttagctgtgttgaatgatgtaatctctcgatttgaatgaataaatat 7015500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 8308338 - 8308387
Alignment:
Q  117 tttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||||||| || |||||||||| |||| ||||||| |||||    
T  8308338 tttttagcgatgttgaacgatgtaatctatcgatttgaatgaatgaatat 8308387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 94
Target Start/End: Original strand, 8809452 - 8809497
Alignment:
Q  49 tagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    ||||||||||||||||||| |||||||||||  ||||||| |||||    
T  8809452 tagacattttgtcgttgtatgctattaacttggatgttgtgagttt 8809497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 152
Target Start/End: Original strand, 23903494 - 23903619
Alignment:
Q  27 tttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 126  Q
    ||||||| |||||||||| || |  |||||||||||||||| | || ||||||  | || || ||||| || ||||| | ||| | | | |||||| |||    
T  23903494 tttaattttatcatattagttgtcaacattttgtcgttgtatgatactaacttggaagtcgtgagtttgttcgcaaactcatcctttccatttttaacga 23903593  T
Q  127 tgttgaatgacgtaatctatcaattt 152  Q
    | |||||||| |||||||||||||||    
T  23903594 tcttgaatgatgtaatctatcaattt 23903619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 30420864 - 30420961
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||  ||||||| ||||| || ||| | | ||| | ||| ||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  30420864 gctattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 30420961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 36234237 - 36234290
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  36234237 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 36234290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 38575427 - 38575275
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||||||| || ||||||| |||  ||||||| ||||| || ||| | | ||| |     
T  38575427 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattatcttggatgttgtgagtttgttcgcagattcatcctt 38575328  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    || | |||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  38575327 tatg-ttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 38575275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 14 - 165
Target Start/End: Complemental strand, 84123 - 83971
Alignment:
Q  14 atattccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| | |||||||||| ||||||||  |||  ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  84123 atattccggccactttaattttatcatatattttcgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 84024  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaata 165  Q
    ||||||||||||| |||||||||| ||||| | || |||| ||||||| ||||    
T  84023 tacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaata 83971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 3309105 - 3309201
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| |||||||| ||| | | | | | ||||||||||||||| ||||    
T  3309105 atcatattatttgtagtcattttgccgttgtatgctattaacttgggtgctgtgagtttattcgcagattcaccctatacgtttttagcgatattga 3309201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 7646637 - 7646681
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  7646637 tatcatattatttgtaggcattttgccgttgtatgctattaactt 7646681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 9169199 - 9169155
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  9169199 tatcatattatttgtaggcattttgccgttgtatgctattaactt 9169155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 12554122 - 12554078
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| | |||||||||    
T  12554122 tatcatattatttgtaggcattttgtcgttgtatgatattaactt 12554078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 138 - 166
Target Start/End: Original strand, 15439900 - 15439928
Alignment:
Q  138 gtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||||||||||||||||||||    
T  15439900 gtaatctatcaatttaaatgaataaatat 15439928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 18695202 - 18695238
Alignment:
Q  24 cactttaattgtatcatattatttatagacattttgt 60  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  18695202 cactttaattttatcatattatttataggcattttgt 18695238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 166
Target Start/End: Original strand, 21132032 - 21132124
Alignment:
Q  74 taacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||||| ||||| || ||| | | |||   ||||||||||||| |||||||||| ||||| | || |||| ||||||| |||||    
T  21132032 taacttaaatgttgtgagtttgttcgcagattcatcccttacgtttttagcggtgttgaatgatgtaatttttcgatttgaatgaatgaatat 21132124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 25 - 129
Target Start/End: Complemental strand, 29279521 - 29279417
Alignment:
Q  25 actttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagc 124  Q
    |||| |||| ||||||||||||| ||| ||||||| |||| || ||||||||||    |||||| ||||| || ||| | | | ||| ||||||||||||    
T  29279521 acttaaattttatcatattatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgttcgcatattcaccatttacgtttttagc 29279422  T
Q  125 gatgt 129  Q
    |||||    
T  29279421 gatgt 29279417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 38 - 130
Target Start/End: Original strand, 31788618 - 31788710
Alignment:
Q  38 catattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    |||||||||| ||| ||||||| ||||||| |||||||||||  ||| ||| ||||| || ||| | | | | | ||||||||||||||||||    
T  31788618 catattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 31788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 34335621 - 34335577
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    |||||||||||||||| | ||||||| |||||| |||||||||||    
T  34335621 tatcatattatttatatatattttgttgttgtatgctattaactt 34335577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 34720 - 34581
Alignment:
Q  17 ttccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacg 116  Q
    ||||||||||||||||| ||||||||||||| ||| |||||||| |||||| ||  |||||||| ||||||||||||| || ||| | | ||| ||||      
T  34720 ttccagtcactttaattttatcatattatttgtaggcattttgttgttgtatgcctttaacttagatgttgtaagtttgttcgcagattcatcctctata 34621  T
Q  117 tttttagcgatgttgaatgacgtaatctatcaatttaaat 156  Q
    ||||||  ||||||||||||  || | |||||||||||||    
T  34620 tttttattgatgttgaatgatctattatatcaatttaaat 34581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 5856041 - 5856192
Alignment:
Q  15 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatcta 114  Q
    ||||||| ||||||||||| || |||||||||| |||| |||||| ||||||| ||||||||||| ||||||| || ||| ||  |||| | ||||| ||    
T  5856041 tattccaatcactttaattttaccatattatttgtagaaattttgccgttgtatgctattaacttgaatgttgcaaatttgttcacaaattcatcattta 5856140  T
Q  115 cgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | |||||| | || ||||| || ||| ||||||||||| ||||||| |||||    
T  5856141 cttttttaacaatattgaacgatgtactctatcaatttgaatgaatgaatat 5856192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 19715837 - 19715684
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||  ||| || |||||||||||  ||| ||| |||||||| ||| | | ||| |     
T  19715837 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttattcgcagattcatcctt 19715738  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||| |||||    
T  19715737 tacgtttttagcggtgttgaatgatgtaatctctcaatttaaatgaatgaatat 19715684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 38520477 - 38520324
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||||||||||||||||| |||| ||| | ||| ||| |||| |  |||| || |||||||||||  ||||||| ||||| ||  |||| | ||| |     
T  38520477 atattccagtcactttaattttatcgtatatttttgtaggcattataccgttatatgctattaacttggatgttgtgagtttgttcacaaattcatcctt 38520378  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||| |||||||||||| ||||| | ||||||||||||||| |||||    
T  38520377 tacgtttttagtgatgttgaatgatgtaatttctcaatttaaatgaatgaatat 38520324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 12 - 167
Target Start/End: Complemental strand, 50272084 - 50271928
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    |||||||||||||||||||||| | |||||| | ||| ||| |||| || |||| || |||||||||||| ||||||| ||||| || ||| | | |||     
T  50272084 gaatattccagtcactttaattttgtcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcc 50271985  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
      ||| ||||||||| |||||||||| ||||| | || |||| ||||||||||||||    
T  50271984 gttacctttttagcggtgttgaatgatgtaatatctcgatttgaatgaataaatatt 50271928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 9687149 - 9686994
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| || ||| | | |||     
T  9687149 gaatattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcc 9687050  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||| |||||||||| ||||| | || |||| ||||||| |||||    
T  9687049 tttacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatat 9686994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 45426010 - 45425855
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||| | |||||||||||| |||||||| | ||| ||| |||| |  |||| || |||||||||||  ||| ||| |||||||| ||| | | ||||    
T  45426010 gaatatttcggtcactttaattttatcatatatttttgtaggcattataccgttatatgctattaacttggatgctgtgagtttattcgcagattcatca 45425911  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||||| || ||||| ||||||| ||||||| ||||||| |||||    
T  45425910 tttacgtttttagcgatattaaatgatgtaatctctcaatttgaatgaatgaatat 45425855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 166
Target Start/End: Original strand, 47133056 - 47133188
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--a 133  Q
    |||||||| ||| ||| ||||||| |||| || |||||||||||  ||||||| ||||| || ||| | ||||| | ||||||||||||||||||||       
T  47133056 atcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagatttatcctttacgtttttagcgatgttgattc 47133155  T
Q  134 tgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||| ||| ||||||||||| ||||||| |||||    
T  47133156 tgatgtattctatcaatttgaatgaatgaatat 47133188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 51872002 - 51872155
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  51872002 atattccggtgactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 51872101  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| ||||||| || ||||||| ||||||| ||||||| |||||    
T  51872102 tacgtttttagcggtgttgaaggatgtaatctctcaatttgaatgaatgaatat 51872155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 5324492 - 5324349
Alignment:
Q  22 gtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttt 120  Q
    |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||  || ||| | | ||  | ||||||||    
T  5324492 gtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagttg-ttcgcagattcatgctttacgtttt 5324394  T
Q  121 tagcgatgttgaatgacgtaatctatcaatttaaatgaataaata 165  Q
    |||||||||||||||| ||||||| || |||||||||||| ||||    
T  5324393 tagcgatgttgaatgatgtaatctctcgatttaaatgaatgaata 5324349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 31919141 - 31919232
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 126  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||  ||||||  ||||| || ||| | | ||| | ||||||||||||||    
T  31919141 tatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacgtttttagcga 31919232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 50148509 - 50148655
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||  || ||| | | ||| |     
T  50148509 atattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagttgtttcgcagattcatcctt 50148608  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 159  Q
    ||| |||||||||||||||||||| ||||||| || |||| ||||||    
T  50148609 tacatttttagcgatgttgaatgatgtaatctctcgatttgaatgaa 50148655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 50166030 - 50165888
Alignment:
Q  25 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 123  Q
    ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| ||  || | | ||| | |||||||||||    
T  50166030 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcacagattcatcctttacgtttttag 50165931  T
Q  124 cgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    || |||||||||| ||||||| || |||||||||||| |||||    
T  50165930 cggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 50165888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 25 - 166
Target Start/End: Complemental strand, 799780 - 799641
Alignment:
Q  25 actttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagc 124  Q
    |||| |||| ||||||||||||| |||| ||||| || ||||| |||||||||| | ||||||  ||||| ||  || | | ||||| ||||||||||      
T  799780 acttcaattttatcatattatttgtagatatttt-tcattgtatgctattaact-agatgttgcgagtttgttcacatattcatcatttacgtttttaat 799683  T
Q  125 gatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||| ||| | ||||||||||||| |||||||||    
T  799682 gatgttgaatgatgtactttatcaatttaaatcaataaatat 799641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 9172629 - 9172782
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| | ||||||| |||| || || | |  |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  9172629 atattccggtgactttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatcctt 9172728  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  9172729 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 9172782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 9180611 - 9180764
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| | ||||||| |||| || || | |  |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  9180611 atattccggtgactttaattttatcatatatttttataggcattatgccgctatttgctattaacttggatgatgtgagtttgttcgcagattcatcctt 9180710  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  9180711 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 9180764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 11454132 - 11454229
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||  ||||||| ||||| || ||| | | ||| | ||||||||||||| |||||||||| ||||||| || |||| |||||||||||||    
T  11454132 gctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaataaatat 11454229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 11709649 - 11709496
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||  || |||||||| ||| ||||||| ||||| || ||| | | ||| |     
T  11709649 atattccggtcactttaattttatcatatatttttgtaggcattatgccgtgatatgctattaatttagatgttgtgagtttgttcgcagattcatcctt 11709550  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||| | |||||||||| ||||||| || |||| ||||||| |||||    
T  11709549 tacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 11709496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 33291360 - 33291207
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||| ||| || ||| |||||||  ||| ||| ||||| || ||| | | |||||     
T  33291360 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctgttaacttggatgctgtgagtttgttagcagattcatcatt 33291261  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||  | |||||||||| ||||||| || |||||||||||| |||||    
T  33291260 tacgtttttattggtgttgaatgatgtaatctctcgatttaaatgaatgaatat 33291207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 157
Target Start/End: Original strand, 5701398 - 5701542
Alignment:
Q  14 atattccagtcactttaattgtatcatattatt-tatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  |||||||  || | ||| |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | ||| |     
T  5701398 atattccggtcactttaatttcatcatatatttgtgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 5701497  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatg 157  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||    
T  5701498 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatg 5701542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 15431606 - 15431511
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| |||||||||| |||||||| |||||| ||||  ||||||| ||||| || ||| | | ||| | |||||||||||| |||||    
T  15431606 tatcatattatttgtagacattttatcgttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcaatgtt 15431511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 46399107 - 46399166
Alignment:
Q  20 cagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    |||| ||||||||| |||||||||||||||| ||||||||| |||||| | |||||||||    
T  46399107 cagttactttaattatatcatattatttataaacattttgttgttgtatgttattaactt 46399166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 51868589 - 51868434
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    |||||||||  | ||||||||| |||||||| | ||| ||| |||| || |||| || | |||||||||  ||| ||| ||||| || ||||| | |||     
T  51868589 gaatattccgatgactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgctgtgagtttgttcgcaaattcatcc 51868490  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  51868489 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 51868434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 19061061 - 19061194
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga-- 132  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||  ||||||| ||||| || ||| | | ||| | || |||||||||||| ||||      
T  19061061 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcacattcatcttttatgtttttagcgatcttgatt 19061160  T
Q  133 atgacgtaatctatcaatttaaatgaataaatat 166  Q
     ||| ||| | ||||||||| ||||||| |||||    
T  19061161 ctgatgtattatatcaatttgaatgaatgaatat 19061194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 19723463 - 19723605
Alignment:
Q  25 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 123  Q
    ||||||||| |||||||| | ||| ||| |||| ||||||| || | |||||||||  ||| ||| |||||||| ||| | | ||| | |||||||||||    
T  19723463 actttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgctgtgagtttattcgcagattcatcctttacgtttttag 19723562  T
Q  124 cgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
     | |||||||||| ||||||| || |||| ||||||| |||||    
T  19723563 tggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 19723605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 20266444 - 20266594
Alignment:
Q  17 ttccagtcactttaattgtatcatattattta-tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctac 115  Q
    |||||||||||||||||  |||||||  |||  |||||||| || |||| || || ||||||||  ||||||| |||||||| ||| | | ||| | |||    
T  20266444 ttccagtcactttaatttcatcatatacttttgtagacattatgccgttatatgcaattaacttggatgttgtgagtttattcgcagattcatcctttac 20266543  T
Q  116 gtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||| | |||||||| | ||||||| || |||| ||||||| |||||    
T  20266544 gtttttagtggtgttgaataatgtaatctctcgatttgaatgaatgaatat 20266594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 97
Target Start/End: Original strand, 39888334 - 39888396
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatt 97  Q
    ||||||||| ||||||  |||||| |||||||| |||||||||||| ||||||| ||||||||    
T  39888334 tatcatattctttatatgcattttatcgttgtatgctattaacttagatgttgtgagtttatt 39888396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 7342861 - 7343014
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| | ||||||| |||| ||  ||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  7342861 atattccggtgactttaattttatcatatatttttataggcattatgatgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 7342960  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||| ||| ||||||| || |||| ||||||| |||||    
T  7342961 tacgtttttagcggtgttgagtgatgtaatctctcgatttgaatgaatgaatat 7343014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 25406226 - 25406073
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  25406226 atattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcttt 25406127  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||| | || |||| ||||||| |||||    
T  25406126 tacgtttttagcggtgttgaatgatgtaatatctcgatttgaatgaatgaatat 25406073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 49 - 130
Target Start/End: Original strand, 27456650 - 27456731
Alignment:
Q  49 tagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||||||||| |||||||||||   |||||| ||||| || ||||| | ||| | |||||||||| |||||||    
T  27456650 tagacattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcatcttttacgtttttaacgatgtt 27456731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 39987657 - 39987710
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||| ||||||||| ||||||| |||||    
T  39987657 tacgtttttagcggtgttgaatgatgtaatttatcaatttgaatgaatgaatat 39987710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 5983988 - 5984032
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  5983988 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 5984032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Complemental strand, 36775649 - 36775553
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||  ||||||| ||||| || ||| | | | | | ||||||||||||||| ||||    
T  36775649 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacgtttttagcgatattga 36775553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 16989523 - 16989618
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| |||| || |||||||||||   || ||| ||||| |||||| | ||| ||| ||||||||||| ||||||    
T  16989523 tatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgtttgcagatttaccatttacgtttttagtgatgtt 16989618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 48809178 - 48809127
Alignment:
Q  15 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgt 66  Q
    |||| |||||||||||||| |||||||||||||||||  |||||||| ||||    
T  48809178 tatttcagtcactttaattttatcatattatttataggtattttgtcattgt 48809127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 134
Target Start/End: Complemental strand, 19052264 - 19052155
Alignment:
Q  25 actttaattgtatcatattatttatagacatttt-gtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 123  Q
    ||||||||| ||||||||||||| ||  |||||| | |||||||  ||||||| || || ||||| |||||||| | ||| ||||||| ||  |||||||    
T  19052264 actttaattttatcatattatttgtatgcatttttgccgttgtat-ctattaatttgaaggttgtgagtttattcgtaaatttatcatttatatttttag 19052166  T
Q  124 cgatgttgaat 134  Q
    |||||||||||    
T  19052165 cgatgttgaat 19052155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 45393267 - 45393321
Alignment:
Q  13 aatattccagtcactttaattgtatcatattatttatagacattttgtcgttgta 67  Q
    ||||||| ||||| ||||||| ||||||||||||||||| |||||| || |||||    
T  45393267 aatattctagtcattttaattttatcatattatttatagtcattttatcattgta 45393321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 103
Target Start/End: Complemental strand, 19885231 - 19885150
Alignment:
Q  22 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaa 103  Q
    |||||||| ||| |||||||||||||| ||||||||| || || ||  ||| ||||||   |||||||||||| ||||||||    
T  19885231 gtcactttgattttatcatattatttagagacattttatcattatatactactaacttgggtgttgtaagtttgtttgcaaa 19885150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 30879314 - 30879367
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  30879314 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 30879367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 23 - 76
Target Start/End: Complemental strand, 32873816 - 32873763
Alignment:
Q  23 tcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaa 76  Q
    ||||||| ||| ||||||||||||| ||||||| ||||| ||||| ||||||||    
T  32873816 tcactttgattttatcatattatttgtagacatattgtcattgtatgctattaa 32873763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 132
Target Start/End: Original strand, 49627065 - 49627162
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    |||||| |||||| ||||||||||| ||||||| |||||||| ||   |||||| ||||| || ||| | | ||| | ||||||||||||||| ||||    
T  49627065 tatcatcttatttgtagacattttgccgttgtatgctattaatttgggtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatcttga 49627162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 11462422 - 11462378
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| |||  |||||||||||||| |||||||||||    
T  11462422 tatcatattatttgtaggaattttgtcgttgtatgctattaactt 11462378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 14872791 - 14872835
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  14872791 tatcatattatttgtaggcattttgccgttgtatgctattaactt 14872835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 24583298 - 24583342
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  24583298 tatcatattatttgtaggcattttgccgttgtatgctattaactt 24583342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 31984313 - 31984357
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||  ||||||||||||||| |||||||||||    
T  31984313 tatcatattatttttaagcattttgtcgttgtatgctattaactt 31984357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 32395150 - 32395194
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||||||| ||||||| || |||| |||||||||||    
T  32395150 tatcatattatttataggcattttgccgctgtatgctattaactt 32395194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 48750338 - 48750434
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| || ||| | | | | | ||||||||||||||| ||||    
T  48750338 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcaccctatacgtttttagcgatattga 48750434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 51373798 - 51373754
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||| ||| |||||||||||    
T  51373798 tatcatattatttgtaggcattttgtcgtcgtatgctattaactt 51373754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 2e-19; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 33298997 - 33299142
Alignment:
Q  15 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    ||||| ||||||||||||| |||||||| | ||||||| |||| || |||| || |||||||||||| ||||||| ||||| || ||| | | ||||| |    
T  33298997 tattctagtcactttaattttatcatatatttttataggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcattt 33299096  T
Q  114 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 159  Q
    ||  |||||| | |||||||||| ||| ||||||||||||||||||    
T  33299097 acaattttaggggtgttgaatgatgtattctatcaatttaaatgaa 33299142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 24 - 166
Target Start/End: Complemental strand, 44099868 - 44099725
Alignment:
Q  24 cactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttta 122  Q
    |||||||||| |||||||| | ||| ||  |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | ||| | ||||||||||    
T  44099868 cactttaattttatcatatatttttgtatgcattatgtcgttatatgctattaacttggatgttgtgagtttgttagcagattcatcctttacgttttta 44099769  T
Q  123 gcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||| |||||||||| ||||||| ||||||| |||||||||||||    
T  44099768 gcggtgttgaatgatgtaatctctcaatttgaatgaataaatat 44099725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 4809106 - 4809259
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||| ||||||| ||||| || ||| | | ||| |     
T  4809106 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttagatgttgtgagtttgttcgcagattcatcctt 4809205  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  4809206 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 4809259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 14 - 160
Target Start/End: Original strand, 2656012 - 2656159
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| ||  ||| || |||||||||||  ||| ||| ||||| || ||||| | |||||     
T  2656012 atattccggtcactttaatttcatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatcatt 2656111  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 160  Q
    ||||||||||||| |||||||||| ||||||| || ||||||||||||    
T  2656112 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaat 2656159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 157
Target Start/End: Original strand, 8441325 - 8441470
Alignment:
Q  12 gaatattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcat 111  Q
    |||||||||  | ||||||||| |||||||||||||  ||  ||||| |||||||| |||||||| ||| ||| | | |||||||||||||| | ||| |    
T  8441325 gaatattccgataactttaattttatcatattatttgcaggtattttatcgttgtatgctattaatttagatgatatgagtttatttgcaaattcatctt 8441424  T
Q  112 ctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatg 157  Q
     |||||| ||||| ||||| ||||| ||| | ||||||||| ||||    
T  8441425 ttacgttcttagcaatgttaaatgatgtattttatcaatttgaatg 8441470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 27747055 - 27746928
Alignment:
Q  15 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    |||||| |||||||| ||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||||| |||||||||| | | ||||| |    
T  27747055 tattccggtcacttttatt-tatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtaaatttatttgcagattcatcattt 27746957  T
Q  114 acgtttttagcgatgttgaatgacgtaat 142  Q
    |||||||||||| | |||||||| |||||    
T  27746956 acgtttttagcggtattgaatgatgtaat 27746928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 28086750 - 28086655
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||||||| |  | | ||||| ||  || | | ||||||||||||||||||||||||    
T  28086750 tatcatattatttgtaggcattttgtcgttgtatgctattaacttaagtactatgagtttgttcacatattcatcatctacgtttttagcgatgtt 28086655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Complemental strand, 29617212 - 29617153
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||||||||||| |||||    
T  29617212 tatcatattatttgtaggcattttgttgttgtatgctattaacttaaatgttgtgagttt 29617153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 34609987 - 34610046
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    |||||||||||| |||| ||||||| ||||| | ||||||||||||||||||||||||||    
T  34609987 tatcatattattaataggcattttggcgttgaatgctattaacttaaatgttgtaagttt 34610046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 14906865 - 14906712
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||| ||| || |||||||||||  ||  ||| ||||| || ||| | | ||| |     
T  14906865 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatcctgtgagtttgttcgcagattcatcctt 14906766  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  14906765 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 14906712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 19876440 - 19876493
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| ||||||| |||||||||||||    
T  19876440 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaataaatat 19876493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 28240083 - 28240136
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||    
T  28240083 tacgtttttagcgatgttgaatgacgtaacctatcgatttgaatgaatgaatat 28240136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 32724423 - 32724270
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||  |||| ||| | ||| ||| |||| ||||||| ||  ||||||||||  ||||||| ||||| || | | | ||||| |     
T  32724423 atattccggtcactttaatcttatcttatatttttgtaggcattatgtcgttatatactattaacttggatgttgtgagtttgttcgtagatttatcctt 32724324  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || ||| |||||||| |||||    
T  32724323 tacgtttttagcggtgttgaatgatgtaatctctcgattcaaatgaatgaatat 32724270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 43890066 - 43889913
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| | ||| |||||| | | ||| |     
T  43890066 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgattttgtttgcagattcatcctt 43889967  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||  |||||||| | ||||||| ||||||||||||||| |||||    
T  43889966 tacgtttttagcattgttgaataatgtaatctctcaatttaaatgaatgaatat 43889913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 25 - 160
Target Start/End: Complemental strand, 23851425 - 23851289
Alignment:
Q  25 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 123  Q
    |||||||||  ||||||| | ||| ||| |||| ||||||| || |||||||||||| ||||||| ||||| || ||| | ||||| | ||| |||||||    
T  23851425 actttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaacttagatgttgtgagtttgttcgcagatttatcttttacttttttag 23851326  T
Q  124 cgatgttgaatgacgtaatctatcaatttaaatgaat 160  Q
     | |||||||||| ||||||| || |||| |||||||    
T  23851325 tggtgttgaatgatgtaatctctcgatttgaatgaat 23851289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 25238531 - 25238475
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaag 91  Q
    ||||||||||||||||||||||||| ||||||| | ||| ||||| |||||||||||    
T  25238531 tatcatattatttatagacattttgccgttgtatgttataaacttgaatgttgtaag 25238475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 159
Target Start/End: Original strand, 11464313 - 11464459
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| ||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || | | | | ||| |     
T  11464313 atattccggtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgtagattcatcctt 11464412  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 159  Q
    ||||||||||||| |||||||||| ||||||| || |||||||||||    
T  11464413 tacgtttttagcggtgttgaatgatgtaatctctcgatttaaatgaa 11464459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 11725922 - 11725975
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  11725922 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 11725975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 15344459 - 15344594
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga--tgttga 132  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||  | ||||    
T  15344459 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgatcttttga 15344558  T
Q  133 --atgacgtaatctatcaatttaaatgaataaatat 166  Q
       ||| ||| ||||||||||| |||||||||||||    
T  15344559 ttctgatgtattctatcaatttgaatgaataaatat 15344594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 15433524 - 15433659
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga--tgttga 132  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||  | ||||    
T  15433524 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgatcttttga 15433623  T
Q  133 --atgacgtaatctatcaatttaaatgaataaatat 166  Q
       ||| ||| ||||||||||| |||||||||||||    
T  15433624 ttctgatgtattctatcaatttgaatgaataaatat 15433659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 15524828 - 15524963
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga--tgttga 132  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||  | ||||    
T  15524828 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcgatcttttga 15524927  T
Q  133 --atgacgtaatctatcaatttaaatgaataaatat 166  Q
       ||| ||| ||||||||||| |||||||||||||    
T  15524928 ttctgatgtattctatcaatttgaatgaataaatat 15524963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 17427067 - 17427014
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||||||||||||   |||||||||||||| |||||||| |||||    
T  17427067 tacgtttttagcgatgttgaatattgtaatctatcaattcaaatgaatgaatat 17427014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 17430717 - 17430664
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||||||||||||||  ||||||||||||| |||| ||| |||||    
T  17430717 tacgtttttagcgatgttgaatgatataatctatcaattcaaatcaatgaatat 17430664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 166
Target Start/End: Original strand, 29777401 - 29777514
Alignment:
Q  53 cattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaattt 152  Q
    |||| ||||||| || |||||||||||  ||| ||| ||||| || ||| | | ||| | ||||||||||||| |||||||||| ||||||| || ||||    
T  29777401 cattatgtcgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatctctcgattt 29777500  T
Q  153 aaatgaataaatat 166  Q
     ||||||| |||||    
T  29777501 gaatgaatgaatat 29777514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 33342584 - 33342728
Alignment:
Q  22 gtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttt 120  Q
    |||||||||||| |||||||| ||||| ||| |||| || |||| || ||||||||||| |||| ||| ||||| || ||| | | ||||| |||  |||    
T  33342584 gtcactttaattttatcatatatatttgtaggcattatgccgttatatgctattaacttgaatgctgtgagtttgttcgcagattcatcatttac-attt 33342682  T
Q  121 tagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||| |||||||| | |||||||||  |||| ||||||| |||||    
T  33342683 tagcggtgttgaataatgtaatctattgatttgaatgaatgaatat 33342728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 33896284 - 33896381
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||  ||||||| ||||| || ||| | | ||| | ||| ||||||||| |||||||||| ||||||| || |||| |||||||||||||    
T  33896284 gctattaacttggatgttgtgagttttttcgcagattcatcctttacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaataaatat 33896381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 34611946 - 34612099
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| | | ||| || |||||||||||  ||||||| ||||| || ||| | | ||  |     
T  34611946 atattccggtcactttaattttatcatatatttttgtaggcattatcttgttatatgctattaacttggatgttgtgagtttgttcgcagattcattctt 34612045  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||| |||||| ||||| ||||||| || |||| ||||||| |||||    
T  34612046 tacgtttttagtgatgttcaatgatgtaatctctcgattttaatgaatgaatat 34612099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 9637347 - 9637303
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  9637347 tatcatattatttttaggcattttgtcgttgtatgctattaactt 9637303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 18890637 - 18890593
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  18890637 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 18890593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 23230794 - 23230838
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  23230794 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 23230838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 27110403 - 27110359
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||    
T  27110403 tatcatattatttgtagacattttatcgttgtatgctattaactt 27110359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 24186619 - 24186504
Alignment:
Q  15 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatcta 114  Q
    |||| |||| |||| |||| ||||||||||||||||| ||||||| ||| |||  |||||||||||  |||| | ||||| || ||| | | ||| | ||    
T  24186619 tatttcagtgacttaaattttatcatattatttataggcattttgccgtcgtatactattaacttaggtgttatgagtttgttagcagattcatctttta 24186520  T
Q  115 cgtttttagcgatgtt 130  Q
    |||||||| |||||||    
T  24186519 cgtttttatcgatgtt 24186504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 41896669 - 41896712
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||    
T  41896669 atcatattatttgtaggcattttgtcgttgtatgctattaactt 41896712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 168
Target Start/End: Original strand, 21238017 - 21238074
Alignment:
Q  113 tacgtttttagcgatgttga--atgacgtaatctatcaatttaaatgaataaatattg 168  Q
    ||||||||||||||||||||  |||| ||| ||||||||||| ||||||| |||||||    
T  21238017 tacgtttttagcgatgttgattatgatgtattctatcaatttgaatgaatgaatattg 21238074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 9072960 - 9073013
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  9072960 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 9073013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 9619243 - 9619146
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||  ||| ||| ||||| || ||| | | ||| | ||||||||||||| |||||||||| ||||| | ||||||| ||||||| |||||    
T  9619243 gctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatat 9619146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 146
Target Start/End: Original strand, 11197081 - 11197158
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctat 146  Q
    |||||||||||  ||| ||| ||||| ||| || | ||||||| |||||||||| | ||||||||||| |||||||||    
T  11197081 gctattaacttggatgctgtgagtttgtttacagatttatcatttacgtttttaacaatgttgaatgatgtaatctat 11197158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 29939451 - 29939504
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgt 88  Q
    ||||||||||||| ||| ||||||| ||||||| | |||||||||| |||||||    
T  29939451 tatcatattatttgtagtcattttgccgttgtatgatattaacttagatgttgt 29939504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 15 - 64
Target Start/End: Original strand, 35812803 - 35812852
Alignment:
Q  15 tattccagtcactttaattgtatcatattatttatagacattttgtcgtt 64  Q
    |||| |||| ||||||||| ||||||||||||| |||| |||||||||||    
T  35812803 tatttcagtgactttaattttatcatattatttgtagatattttgtcgtt 35812852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 37565821 - 37565668
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||| ||| |||||||| | ||| ||| |||| ||  ||| || |||||||||||  ||| ||| ||||| || ||||| | ||| |     
T  37565821 atattccggtcactttgattttatcatatatttttgtaggcattatgctgttatatgctattaacttggatgctgtgagtttgttcgcaaattcatcctt 37565722  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||| | |||||||||| ||||||| || ||||  |||||| |||||    
T  37565721 tacgtttttagtggtgttgaatgatgtaatctctcgatttgcatgaatgaatat 37565668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 43833934 - 43833837
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| |||||| | | | ||| ||| ||||||||||| ||||    
T  43833934 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccatttacttttttagcgatattga 43833837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 44578172 - 44578253
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||| |||||||||    
T  44578172 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtaagttt 44578253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 7198133 - 7198006
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga-- 132  Q
    |||||||||||||  ||  |||||||||||||| |||||||| ||   |||||| |||||||| ||| | | | | | ||||||||||||||| ||||      
T  7198133 tatcatattatttgcaggaattttgtcgttgtatgctattaatttgggtgttgtgagtttattcgcagattcaccctttacgtttttagcgatcttgatt 7198034  T
Q  133 atgacgtaatctatcaatttaaatgaat 160  Q
     ||| ||| ||||||||||| |||||||    
T  7198033 ctgatgtattctatcaatttgaatgaat 7198006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 10377840 - 10377884
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  10377840 tatcatattatttgtaggcattttgccgttgtatgctattaactt 10377884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 17427133 - 17427093
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaa 76  Q
    |||||||||||||||| | ||||||||||||| ||||||||    
T  17427133 atcatattatttataggcgttttgtcgttgtatgctattaa 17427093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 17430783 - 17430743
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaa 76  Q
    |||||||||||||||| | ||||||||||||| ||||||||    
T  17430783 atcatattatttataggcgttttgtcgttgtatgctattaa 17430743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 20553179 - 20553135
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  20553179 tatcatattatttgtaggcattttgccgttgtatgctattaactt 20553135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 31013546 - 31013502
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  31013546 tatcatattatttgtaggcattttgccgttgtatgctattaactt 31013502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 33214609 - 33214565
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||||||||||| |||| || |||||||||||    
T  33214609 tatcatattatttttagacattttgccgttttatgctattaactt 33214565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 35141756 - 35141672
Alignment:
Q  82 atgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||| |||||| ||| ||| ||||||| |||||||| ||  ||||||||| |  || ||||||||| | |||||||||||||    
T  35141756 atgttgtgagtttagttgtaaatttatcatttacgttttcagtaatgttgaataatatactctatcaatatgaatgaataaatat 35141672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 36 - 179
Target Start/End: Original strand, 35175553 - 35175698
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--a 133  Q
    |||||||| ||| ||| ||||||||| ||||| ||||||||||| | |||||| ||||| || ||| | | ||| | ||||||||||||||||||||  |    
T  35175553 atcatattgtttgtaggcattttgtcattgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagcgatgttgatta 35175652  T
Q  134 tgacgtaatctatcaatttaaatgaataaatattgatttaattttg 179  Q
    ||| ||| ||||||||||| ||||||| ||||| | |||| |||||    
T  35175653 tgatgtattctatcaatttgaatgaatgaatatcgttttatttttg 35175698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 23 - 179
Target Start/End: Original strand, 22803171 - 22803328
Alignment:
Q  23 tcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttt 121  Q
    ||||||||||| |||||| | | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| ||  |||| ||||| | |||||||||    
T  22803171 tcactttaattttatcatgtatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcacaaatttatcctttacgttttt 22803270  T
Q  122 agcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgatttaattttg 179  Q
    ||||||||||||||| |||| ||||| |||||||||||| |||||  ||||| |||||    
T  22803271 agcgatgttgaatgatgtaacctatcgatttaaatgaatgaatatcaatttatttttg 22803328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 25162568 - 25162721
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||  | | ||| |     
T  25162568 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcggattcatcctt 25162667  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  25162668 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 25162721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 36906254 - 36906407
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||||||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  36906254 atattccagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgatgtgagtttgttcgcagattcatcctt 36906353  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  36906354 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 36906407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 179
Target Start/End: Complemental strand, 30648663 - 30648495
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||| | || ||||||||| |||||||| | ||||||| || | ||||||| || |||||||||||  ||||||| ||||| || ||| | | |||     
T  30648663 gaatatttcggtaactttaattttatcatatatttttataggcaatatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcc 30648564  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgatttaattttg 179  Q
    | || |||||||||| |||||||| | ||||||| || |||| ||||||| ||||||  ||||||||||    
T  30648563 tttatgtttttagcggtgttgaattatgtaatctctcgatttgaatgaatgaatattagtttaattttg 30648495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 43017036 - 43017131
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| ||||||| ||||||||||||  |||||| ||||||||  || | | ||| | ||||||||||||||||||    
T  43017036 tatcatattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacgtttttagcgatgtt 43017131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 44907343 - 44907188
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| ||||||||||||  ||||||| | ||| ||| |||| ||||||| || |||||||| ||  ||||||| ||||| || ||| | | |||     
T  44907343 gaatattccggtcactttaatttcatcatatatttttgtaggcattatgtcgttatatgctattaatttggatgttgtgagtttgttcgcagattcatcc 44907244  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||| |||||||||| ||||| | || |||| ||||||| |||||    
T  44907243 tttacgtttttagcgttgttgaatgatgtaatatctcgatttgaatgaatgaatat 44907188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 3848861 - 3848708
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| ||||| ||| |||| || || | || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  3848861 atattccggtgactttaattttatcatatatatttgtaggcattatgccgctatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 3848762  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  3848761 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 3848708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 12116230 - 12116383
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||| |||||||||||||  ||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| ||   | | | ||| |     
T  12116230 atattctagtcactttaatttcatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcttagattcatcctt 12116329  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||||||||||||||| ||||||| || |||| ||||||| |||||    
T  12116330 tacgtttttagcgatgttgaatgatgtaatctctcgatttgaatgaatgaatat 12116383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 22 - 90
Target Start/End: Complemental strand, 19862281 - 19862213
Alignment:
Q  22 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaa 90  Q
    |||||| ||||| |||||||||||||| ||||||||||||||| || |||||||| || ||| ||||||    
T  19862281 gtcactctaattttatcatattatttagagacattttgtcgttatatgctattaatttgaattttgtaa 19862213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 166
Target Start/End: Complemental strand, 6823472 - 6823413
Alignment:
Q  107 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||| || ||||||||||||||| ||| | ||||||||||||||||||||||| |||||    
T  6823472 atcatttaggtttttagcgatgtttaataatgtaatctatcaatttaaatgaatgaatat 6823413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 44959913 - 44959818
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| | ||||| |||||||||||  ||| ||| |||||||||||| | | | | | ||||||||||||||||||    
T  44959913 tatcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagtttatttgcagattcaccctttacgtttttagcgatgtt 44959818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 46934774 - 46934924
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||   |||||| || |||||||||||  ||||||| ||||| || | | | | ||| |     
T  46934774 atattccggtcactttaattttatcatatatttttgtaggcat---gtcgttatatgctattaacttggatgttgtgagtttgttcgtagattcatcctt 46934870  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||||||||||||||| | ||||| || |||| ||||||| |||||    
T  46934871 tacgtttttagcgatgttgaatgatgcaatctctcgatttgaatgaatgaatat 46934924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 35 - 166
Target Start/End: Complemental strand, 628863 - 628730
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga-- 132  Q
    ||||||||||||| ||| ||||||| |||||||  ||||||||||   |||||| ||||| || ||| | | ||| | ||||||||||||||| ||||      
T  628863 tatcatattatttgtaggcattttgccgttgtattctattaacttgggtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatcttgatt 628764  T
Q  133 atgacgtaatctatcaatttaaatgaataaatat 166  Q
     ||| ||| ||||||||||| ||||||| |||||    
T  628763 ttgatgtattctatcaatttgaatgaatgaatat 628730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 39917340 - 39917195
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||||||||||||||||| |||||||| | ||| ||| |||| || | || || |||||||||||  ||||||| ||||||||  || | | ||| |     
T  39917340 atattccagtcactttaattttatcatatatttttgtaggcattatgcctttatatgctattaacttggatgttgtgagtttattcacagattcatcctt 39917241  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 159  Q
    ||||||||||| | ||||||||||  |||||| ||||||| ||||||    
T  39917240 tacgtttttagaggtgttgaatga-ttaatctctcaattttaatgaa 39917195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 17237937 - 17238090
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| ||| |||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| || ||  | |  || |     
T  17237937 atattccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgctgattcttcctt 17238036  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||| | ||||||| ||||||| |||||    
T  17238037 tacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatat 17238090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 25631468 - 25631315
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || | |||||||||  ||| ||| ||||| || ||| | | ||| |     
T  25631468 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgttattaacttggatgatgtgagtttgttcgcagattcatcctt 25631369  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||| ||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  25631368 tacatttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 25631315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 166
Target Start/End: Complemental strand, 35499102 - 35498989
Alignment:
Q  53 cattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaattt 152  Q
    |||| ||||||| || |||||||| ||  ||||||||||||| || ||| | | ||| | ||||||||||||| |||||||||| ||||||  || ||||    
T  35499102 cattatgtcgttatatgctattaatttggatgttgtaagttttttcgcagattcatcctttacgtttttagcggtgttgaatgatgtaatccctcgattt 35499003  T
Q  153 aaatgaataaatat 166  Q
     ||||||| |||||    
T  35499002 gaatgaatgaatat 35498989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 50194274 - 50194142
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--a 133  Q
    |||||||| ||| ||| ||||||| |||| || |||||||||||  ||||||| ||||| || ||| | | ||| | ||||||||||||||||||||       
T  50194274 atcatattttttgtaggcattttgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcgatgttgattc 50194175  T
Q  134 tgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||| ||| | ||||||||| ||||||| |||||    
T  50194174 tgatgtattatatcaatttgaatgaatgaatat 50194142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 9797474 - 9797430
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  9797474 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 9797430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 16235575 - 16235671
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    ||||||||| || ||| ||||||||||||||| |||||||||||  ||| ||| ||||| || ||| | ||| | | ||||||||||||||| ||||    
T  16235575 atcatattacttgtaggcattttgtcgttgtatgctattaacttggatggtgtgagtttgttcgcagatttaccctatacgtttttagcgatattga 16235671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 4711630 - 4711725
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| |||||| | | ||| | || |||||||| ||||||    
T  4711630 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatcctttatgtttttagtgatgtt 4711725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 19619861 - 19619952
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 126  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||| | ||||| | |||||  | ||| | | ||||| ||||||||||||||    
T  19619861 tatcatattatttgtaggcattttgccgttgtatgctattaactaagatgttttgagtttgatcgcagattcatcatttacgtttttagcga 19619952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 21533749 - 21533654
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| || ||| | ||| | | ||||||||||||||||||    
T  21533749 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagatttaccttttacgtttttagcgatgtt 21533654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 27706165 - 27706122
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    |||||||||||| ||| ||||||||||||||| |||||||||||    
T  27706165 atcatattatttgtaggcattttgtcgttgtatgctattaactt 27706122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 32607599 - 32607754
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    |||||||||  |||||||||||  ||||||| | ||| ||| |||| || | || || ||||||||| |  ||||||| ||||| || ||| | | |||     
T  32607599 gaatattccgatcactttaatttcatcatatatttttgtaggcattatgccattatatgctattaacctggatgttgtgagtttgttcgcagattcatcc 32607698  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  32607699 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 32607754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 42455759 - 42455676
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttt 119  Q
    ||||||||| || ||| ||||||||||||||| |||||||||||  ||||||| ||||| || ||| | ||| ||| |||||||    
T  42455759 atcatattagttgtagtcattttgtcgttgtatgctattaacttcgatgttgtgagtttgttcgcagatttaccatttacgttt 42455676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 130
Target Start/End: Complemental strand, 45568385 - 45568290
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| |||||||| ||| | | | | | ||||||||||||||||||    
T  45568385 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacgtttttagcgatgtt 45568290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 69 - 152
Target Start/End: Complemental strand, 51629034 - 51628951
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaattt 152  Q
    |||||||||||||||| ||| | |||||||||||| | ||| | ||| |||| ||||||||||||| |  || |||||||||||    
T  51629034 gctattaacttaaatgatgtgaatttatttgcaaattcatcttttactttttcagcgatgttgaattatttactctatcaattt 51628951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 7448853 - 7448759
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    |||||||||||| ||||||||||| || |||| ||||||||||||  || ||| ||||| || ||| | | | ||| |||||||||| |||||||    
T  7448853 atcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgtttttatcgatgtt 7448759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 130
Target Start/End: Complemental strand, 7456995 - 7456901
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    |||||||||||| ||||||||||| || |||| ||||||||||||  || ||| ||||| || ||| | | | ||| |||||||||| |||||||    
T  7456995 atcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgtttttatcgatgtt 7456901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Complemental strand, 38440433 - 38440380
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  38440433 tacgtttttagcggtgttgaatgatgtaatctttcgatttgaatgaatgaatat 38440380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 100
Target Start/End: Complemental strand, 47176119 - 47176038
Alignment:
Q  19 ccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgc 100  Q
    ||||||| ||| ||| ||||||||||||| |||  | || ||||||| | ||||||||||| |||||||| ||||| |||||    
T  47176119 ccagtcaatttgattttatcatattatttgtaggtaattagtcgttgaatgctattaacttgaatgttgtgagtttgtttgc 47176038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 35 - 132
Target Start/End: Complemental strand, 53807798 - 53807701
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| || ||| | | ||| | ||||||||||||||| ||||    
T  53807798 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatcctttacgtttttagcgatcttga 53807701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 8914861 - 8914957
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||| | || ||| ||||| || ||| | | | | | ||||||||||||||| ||||    
T  8914861 atcatattatttgtaggcattttgccgttgtatgctattaacttgagtgatgtgagtttgttcgcagattcaccttatacgtttttagcgatattga 8914957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 9998615 - 9998659
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  9998615 tatcatattatttgtaggcattttgccgttgtatgctattaactt 9998659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 10108384 - 10108428
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  10108384 tatcatattatttgtaggcattttgccgttgtatgctattaactt 10108428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 10229624 - 10229668
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  10229624 tatcatattatttgtaggcattttgccgttgtatgctattaactt 10229668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 10233218 - 10233262
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  10233218 tatcatattatttgtaggcattttgccgttgtatgctattaactt 10233262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 21313184 - 21313228
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  21313184 tatcatattatttgtagccattttgccgttgtatgctattaactt 21313228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 54 - 166
Target Start/End: Complemental strand, 24396417 - 24396305
Alignment:
Q  54 attttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaattta 153  Q
    |||||| |||| || ||||||||||| ||||||||  |||| |   |||| | ||||| || ||||||||| || |||||||| ||| |||||||||||     
T  24396417 attttgccgttttatgctattaacttgaatgttgtgtgtttgtacacaaattcatcatttaagtttttagcaatattgaatgatgtactctatcaatttg 24396318  T
Q  154 aatgaataaatat 166  Q
    ||| ||| |||||    
T  24396317 aattaatgaatat 24396305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 26275759 - 26275715
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||| ||||| |||||||||||    
T  26275759 tatcatattatttgtaggcattttgtcattgtatgctattaactt 26275715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 38860052 - 38860008
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  38860052 tatcatattatttgtaggcattttgccgttgtatgctattaactt 38860008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 42460897 - 42460941
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| |||||||| |||||| |||||||||||    
T  42460897 tatcatattatttgtaggcattttgttgttgtatgctattaactt 42460941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 48650674 - 48650630
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  48650674 tatcatattatttgtaggcattttgccgttgtatgctattaactt 48650630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 51923876 - 51923972
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga 132  Q
    |||||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| || ||| |   ||| | ||||||||||||||| ||||    
T  51923876 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatatccatcctatacgtttttagcgatattga 51923972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 4e-17; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 781525 - 781678
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| |||||||| || |||| || |||||||||||  ||||||| ||| |||| ||| | | ||| |     
T  781525 atattccggtcactttaattttatcatatatttttgtagacattatgccgttatatgctattaacttggatgttgtgagtatattcgcagattcatcctt 781624  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
     |||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  781625 cacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 781678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 14 - 159
Target Start/End: Complemental strand, 27266801 - 27266655
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||| ||| || |||||||||||  ||| ||| ||||| || ||| | | |||||     
T  27266801 atattccggtcactttaattttatcatatatttttgtaggcattatgttgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcatt 27266702  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 159  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||    
T  27266701 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaa 27266655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 19259754 - 19259601
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | ||||  |     
T  19259754 atattccggtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttattctt 19259655  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||||||||||| || ||||||| || |||| |||| ||||||||    
T  19259654 tacgtttttagcgatgttgaacgatgtaatctctcgatttgaatggataaatat 19259601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 34881862 - 34882007
Alignment:
Q  22 gtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttt 120  Q
    |||||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| |||||| | | ||| | || |||||    
T  34881862 gtcactttaattatatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgtttgcagattcatcctttatgtttt 34881961  T
Q  121 tagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  34881962 tagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 34882007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 35475280 - 35475127
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||||||||||||||||| |||||||| | ||| ||| |||   |||||| || |||||||||||  ||||||| ||| | || | | | | ||| |     
T  35475280 atattccagtcactttaattttatcatatatttttgtaggcataacgtcgttatatgctattaacttggatgttgtgagtatgttcgtatattcatcctt 35475181  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| ||||||| ||||||| |||||    
T  35475180 tacgtttttagcggtgttgaatgatgtaatctctcaatttgaatgaatgaatat 35475127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 11192515 - 11192659
Alignment:
Q  23 tcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttta 122  Q
    ||||||||| | |||| |||||||| ||  ||||||||||||||| | |||||||||  ||||||||| ||| || |||   ||||||| ||||||||||    
T  11192515 tcactttaaatttatcgtattatttgtaagcattttgtcgttgtatgttattaactttgatgttgtaaatttgttggcaggtttatcatttacgttttta 11192614  T
Q  123 gcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
     |||| || |||||  |  ||||||||||| ||||||| ||||||    
T  11192615 acgatattaaatgatattttctatcaatttgaatgaatgaatatt 11192659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 166
Target Start/End: Original strand, 15571045 - 15571197
Alignment:
Q  15 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    ||||||||||||||||||| |||||||| | ||| ||| |||| ||||||| || |||||||||||  ||||||| ||||| || ||| | | |||   |    
T  15571045 tattccagtcactttaattttatcatatatttttgtaggcattatgtcgttatatgctattaacttggatgttgtgagtttgttcgcagattcatccatt 15571144  T
Q  114 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | |||||||| | |||||||||| |||||||||  |||| ||||||| |||||    
T  15571145 atgtttttagtggtgttgaatgatgtaatctatggatttgaatgaatgaatat 15571197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 67
Target Start/End: Complemental strand, 19100579 - 19100527
Alignment:
Q  15 tattccagtcactttaattgtatcatattatttatagacattttgtcgttgta 67  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  19100579 tattccagtcactttaattttatcatattatttgtagacattttgtcattgta 19100527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 20257637 - 20257485
Alignment:
Q  15 tattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatct 113  Q
    |||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| || | |||||||||  ||| ||| ||||| ||  || | | ||||| |    
T  20257637 tattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatatgttattaacttggatgatgtgagtttgttcacagattcatcattt 20257538  T
Q  114 acgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||||||||||||||  ||||||||| |||| ||| ||| |||||    
T  20257537 acgtttttagcgatgttgaatgatataatctatcgatttgaattaatgaatat 20257485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 24549506 - 24549654
Alignment:
Q  17 ttccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacg 116  Q
    |||||| ||| |||||| ||||||||||| | ||| |||||| || |||||  || |||||||| ||| ||||| ||| |||| ||| | ||||| ||||    
T  24549506 ttccagccacgttaattttatcatattatatgtaggcattttatctttgtatactgttaacttagatgctgtaaatttgtttgtaaattcatcatttacg 24549605  T
Q  117 tttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaata 165  Q
    |||||||  |||||||||||  || ||||| ||||||||| ||| ||||    
T  24549606 tttttagttatgttgaatgaaatattctattaatttaaataaatgaata 24549654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 35 - 123
Target Start/End: Complemental strand, 37986053 - 37985965
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 123  Q
    ||||| ||||||| ||||||||||||||||||| ||||||||||| |||| ||| ||||| |||||| | | ||| | |||||||||||    
T  37986053 tatcacattatttgtagacattttgtcgttgtatgctattaacttgaatgatgtgagtttgtttgcagattcatcttttacgtttttag 37985965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 34945541 - 34945636
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||   |||||| ||||| || ||| | | | | | ||||||||||||||||||    
T  34945541 tatcatattatttataggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 34945636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 41630650 - 41630709
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagttt 94  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||  |||||| |||||    
T  41630650 tatcatattatttgtagacattttgtcgttgtatgctattaacttaggtgttgtgagttt 41630709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 42580023 - 42580178
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| |||||||||||| |||||||| | |||  ||| ||| || |||| || ||||||||||| |||| ||| ||||| |||  | | | |||     
T  42580023 gaatattccggtcactttaattttatcatatatttttgcagatattatgccgttatatgctattaacttgaatgctgtgagtttgtttatagattcatcc 42580122  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  42580123 tttacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 42580178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 7247096 - 7247249
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| |     
T  7247096 atattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctt 7247195  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  7247196 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 7247249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 35 - 136
Target Start/End: Original strand, 28097307 - 28097408
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaat 134  Q
    ||||||||||||| |||  |||||   |||||| ||||||||||| ||||||||||| || ||| |||| ||||  | |||||||||| |||||||||||    
T  28097307 tatcatattatttgtagttattttactgttgtatgctattaactttaatgttgtaagcttgtttacaaatttatattttacgtttttaacgatgttgaat 28097406  T
Q  135 ga 136  Q
    ||    
T  28097407 ga 28097408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 14 - 160
Target Start/End: Complemental strand, 3271344 - 3271197
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    |||||||  ||||||||||| |||||||| | ||| ||  |||| ||||||| || |||||||||||  ||||| | ||||| || ||| | | ||| |     
T  3271344 atattccgatcactttaattttatcatatatttttgtaagcattatgtcgttatatgctattaacttggatgttatgagtttgttcgcagattcatcctt 3271245  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaat 160  Q
    ||||||||||||| |||||||||| ||||||| || |||| |||||||    
T  3271244 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaat 3271197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 12 - 166
Target Start/End: Original strand, 4954127 - 4954282
Alignment:
Q  12 gaatattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatca 110  Q
    ||||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| ||  || | | |||     
T  4954127 gaatattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaactttgatgttgtgagtttgttcacatattcatcc 4954226  T
Q  111 tctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    | ||| ||||||||| ||||||| || ||||||| || |||| |||||||||||||    
T  4954227 tttacatttttagcggtgttgaacgatgtaatctctcgatttgaatgaataaatat 4954282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 38597945 - 38598040
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   |||||| ||||| || ||||| | | | | ||||||||||||||||||    
T  38597945 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctttacgtttttagcgatgtt 38598040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 25 - 166
Target Start/End: Original strand, 7241932 - 7242074
Alignment:
Q  25 actttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttag 123  Q
    ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||| ||| ||||| || ||| | | ||| | |||||||||||    
T  7241932 actttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgctgtgagtttgttcgcagattcatcctttacgtttttag 7242031  T
Q  124 cgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    || |||||||||| ||||||| || |||| ||||||| |||||    
T  7242032 cggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 7242074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 101
Target Start/End: Original strand, 32691109 - 32691171
Alignment:
Q  39 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgca 101  Q
    ||||||||||||||||||||| |||||||  ||||||| |||| |||||| ||||| ||||||    
T  32691109 atattatttatagacattttgccgttgtatactattaagttaagtgttgtgagtttgtttgca 32691171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 28 - 136
Target Start/End: Complemental strand, 7612986 - 7612877
Alignment:
Q  28 ttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 126  Q
    |||||| |||||||| | ||| ||| |||| ||||||| || |||||||| || |||||||| ||||| || ||||| | ||| | |||||||||||||     
T  7612986 ttaattttatcatatatttttgtaggcattatgtcgttctatgctattaaattgaatgttgtgagtttgttcgcaaattcatcttttacgtttttagcgg 7612887  T
Q  127 tgttgaatga 136  Q
    ||||||||||    
T  7612886 tgttgaatga 7612877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 18677407 - 18677255
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||  |||| || |||| || |||||||||||  |||||||  |||| || ||| | | ||| |     
T  18677407 atattccggtcactttaattttatcatatatttttgtaagcattatgccgttatatgctattaacttggatgttgtgtgtttgttcgcagattcatcct- 18677309  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  18677308 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 18677255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 21060225 - 21060072
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| |||||||| | ||| ||| |||| ||||||| ||  |||| |||||  ||||||| ||| | || | | | | ||| |     
T  21060225 atattccggtcactttaattttatcatatatttttgtaggcattatgtcgttatattctatcaacttggatgttgtgagtatgttcgtagattcatcctt 21060126  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  21060125 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 21060072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 31078364 - 31078315
Alignment:
Q  30 aattgtatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||    
T  31078364 aattttataatattatttatagacattttgtcattgtatgctattaactt 31078315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 31802412 - 31802367
Alignment:
Q  16 attccagtcactttaattgtatcatattatttatagacattttgtc 61  Q
    |||||| ||||||||||| |||||||||||||||||| ||||||||    
T  31802412 attccaatcactttaattttatcatattatttatagatattttgtc 31802367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 116 - 161
Target Start/End: Original strand, 37483287 - 37483332
Alignment:
Q  116 gtttttagcgatgttgaatgacgtaatctatcaatttaaatgaata 161  Q
    ||||||||||||||||||||| |||||||||| |||| ||||||||    
T  37483287 gtttttagcgatgttgaatgatgtaatctatcgatttgaatgaata 37483332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Original strand, 43148864 - 43149017
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| || ||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||||| ||||| || ||| | | ||| |     
T  43148864 atattccggtgactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttgtgagtttgttcgcagattcatcctt 43148963  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||| ||||||||| ||||||||||  |||||| || |||| ||||||| |||||    
T  43148964 tacatttttagcggtgttgaatgatataatctctcgatttgaatgaatgaatat 43149017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 14082336 - 14082292
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  14082336 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 14082292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 79
Target Start/End: Complemental strand, 9762412 - 9762349
Alignment:
Q  16 attccagtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||| |||||||| ||| ||| ||||||||| |||||| |||||||||||  |||||||||||    
T  9762412 attcctgtcactttgattttattatattatttgtagacactttgtcgttgttagctattaactt 9762349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 22 - 172
Target Start/End: Original strand, 11768144 - 11768295
Alignment:
Q  22 gtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttt 120  Q
    |||||||||||| |||||||| | ||| ||| |||| || |||| || ||||||| |||  ||| ||| ||||| || ||| | | ||| | ||||||||    
T  11768144 gtcactttaattttatcatatatttttgtagccattatgccgttatatgctattatcttggatgatgtgagtttgttcgcagattcatcctatacgtttt 11768243  T
Q  121 tagcgatgttgaatgacgtaatctatcaatttaaatgaataaatattgattt 172  Q
    |||||||||||||| | ||||  |||| |||| ||||||| ||||| |||||    
T  11768244 tagcgatgttgaataatgtaacatatcgattttaatgaatgaatatcgattt 11768295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 13007377 - 13007511
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt-gaa 133  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||   || ||| ||||| |||||| | | | | | |||||||||||||||||| | |    
T  13007377 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtttgta 13007476  T
Q  134 t--gacgtaatctatcaatttaaatgaataaatat 166  Q
    |  || ||| ||||||||||| ||||||| |||||    
T  13007477 tttgatgtactctatcaatttgaatgaatgaatat 13007511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 167
Target Start/End: Complemental strand, 43008201 - 43008103
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatatt 167  Q
    |||||||||||  ||||| | ||||| ||  |||| ||||| | ||||||||||| | |||||||||| ||||||| || |||| ||||||| ||||||    
T  43008201 gctattaacttggatgttatgagtttgttctcaaatttatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatatt 43008103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 8514605 - 8514548
Alignment:
Q  22 gtcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    |||||||| ||| ||||||||||||| || | |||||||||||||| | |||||||||    
T  8514605 gtcacttttattttatcatattatttgtaaatattttgtcgttgtatgttattaactt 8514548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 8772067 - 8771970
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||  ||| | | ||||| |||||||| | ||| | ||||||||||| | |||||||||| ||||||| || |||| ||||||| |||||    
T  8772067 gctattaacttggatgctatgagtttgtttgcaaattcatcctttacgtttttagtggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 8771970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 27752162 - 27752215
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| || |||| ||||||| |||||    
T  27752162 tacgtttttagcggtgttgaatgatgtaatctctcgatttgaatgaatgaatat 27752215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 30298989 - 30299134
Alignment:
Q  22 gtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttt 120  Q
    |||||||||||| |||||||| | ||| ||| |||| || |||| || |||||||||||  ||||| | ||| | || ||| | | ||| | ||||||||    
T  30298989 gtcactttaattttatcatatatttttgtaggcattatgccgttatatgctattaacttggatgttctgagtatgttcgcagattcatcctttacgtttt 30299088  T
Q  121 tagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||| ||||||||||  |||| | || |||||||||||| |||||    
T  30299089 tagcggtgttgaatgatttaatatctcgatttaaatgaatgaatat 30299134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 23 - 135
Target Start/End: Original strand, 13468744 - 13468856
Alignment:
Q  23 tcactttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgttttta 122  Q
    |||||||| || ||||||||||| | ||| |||||||||||  || |||||||||||  || |||| ||||| || | ||| | ||||| || |||||||    
T  13468744 tcactttagttttatcatattatgtgtaggcattttgtcgtcatatgctattaactttgattttgtgagtttgttcgtaaattcatcatttatgttttta 13468843  T
Q  123 gcgatgttgaatg 135  Q
    |  ||||||||||    
T  13468844 gatatgttgaatg 13468856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 20 - 79
Target Start/End: Original strand, 15571619 - 15571679
Alignment:
Q  20 cagtcactttaattgtatcatattatttatagacattttgtc-gttgtacgctattaactt 79  Q
    |||| |||| |||| ||||||||||||||||||||||||  | |||||| |||||||||||    
T  15571619 cagtgacttaaattttatcatattatttatagacatttttccagttgtatgctattaactt 15571679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 36 - 136
Target Start/End: Complemental strand, 19983276 - 19983176
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatg 135  Q
    |||||||||||| ||| |||||| || ||||| |||| |||| || ||||||| |   |||||||| | ||||| | ||| |||||||| ||||||||||    
T  19983276 atcatattatttgtaggcattttatctttgtatgctactaacatagatgttgtgaacatatttgcagatttatcttttacatttttagcaatgttgaatg 19983177  T
Q  136 a 136  Q
    |    
T  19983176 a 19983176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 24229724 - 24229680
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  24229724 tatcatattatttgtaggcattttgccgttgtatgctattaactt 24229680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 26825578 - 26825622
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  26825578 tatcatattatttgtaggcattttgccgttgtatgctattaactt 26825622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 58027 - 57895
Alignment:
Q  36 atcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttga--a 133  Q
    |||||||| ||| ||| ||||||| |||| || |||||||||||  ||| ||| ||||| || ||| | ||||| | |||||||||||||||||| |       
T  58027 atcatattttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatcctttacgtttttagcgatgttaattc 57928  T
Q  134 tgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||| ||| ||||||||||||||||||| |||||    
T  57927 tgatgtattctatcaatttaaatgaatgaatat 57895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 107 - 159
Target Start/End: Complemental strand, 36538 - 36486
Alignment:
Q  107 atcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaa 159  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||||| ||||||    
T  36538 atcatttacgtttttagcgatgttgaatgaagtactctatcaatttgaatgaa 36486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 1493 - 1588
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||||||| ||| ||||||| |||| || |||||||||||  ||||||| ||||| |||||| | | | | | ||||||||||||||||||    
T  1493 tatcatattatttgtaggcattttgccgttttatgctattaacttggatgttgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 1588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 130
Target Start/End: Complemental strand, 71236 - 71145
Alignment:
Q  39 atattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgtt 130  Q
    ||||||||| ||| |||||||| |||||| |||||||||||   |||||||||||| |||| | | | ||| | ||||||||||||||||||    
T  71236 atattatttgtaggcattttgttgttgtatgctattaacttgggtgttgtaagtttgtttgtagattaatcctttacgtttttagcgatgtt 71145  T

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Target: scaffold0039 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 166
Target Start/End: Complemental strand, 53345 - 53207
Alignment:
Q  28 ttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgat 127  Q
    |||||| ||||||||||| |  ||||||||||||  |||| |||||||| ||  | ||||| ||||| || | | | ||||| | || |||||||| |||    
T  53345 ttaattttatcatattatatgcagacattttgtcactgtatgctattaaattggaggttgttagtttgttcgtagatttatcttttatgtttttagtgat 53246  T
Q  128 gttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||| ||| | ||||||||| ||||||| |||||    
T  53245 gttgaatgatgtactatatcaatttgaatgaatgaatat 53207  T

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Target: scaffold0146 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 14 - 166
Target Start/End: Complemental strand, 16262 - 16109
Alignment:
Q  14 atattccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatc 112  Q
    ||||||| |||||||||||| ||| |||| | ||| ||| |||| ||||||| || |||||||||||  ||| ||| ||||| || ||  | |  || |     
T  16262 atattccggtcactttaattttattatatatttttgtaggcattatgtcgttatatgctattaacttggatgatgtgagtttgttcgctgattcttcctt 16163  T
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||| | ||||||| ||||||| |||||    
T  16162 tacgtttttagcggtgttgaatgatgtaatatctcaatttgaatgaatgaatat 16109  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 361737 - 361588
Alignment:
Q  18 tccagtcactttaattgtatcatat-tatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacg 116  Q
    |||||||||||||||| | |||||| | ||| ||| |||| || |||| || | | |||||||  ||||||| ||| | || ||| | ||||| | ||||    
T  361737 tccagtcactttaattttctcatatatttttgtaggcattatgccgttatatgttgttaacttggatgttgtgagtgtgttcgcagatttatcctttacg 361638  T
Q  117 tttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||| |||||||||| ||||||| ||||| | ||||||| |||||    
T  361637 tttttagcggtgttgaatgatgtaatctctcaatatgaatgaatgaatat 361588  T

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Target: scaffold0050 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 65982 - 65938
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||||||    
T  65982 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 65938  T

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Target: scaffold0347 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 35 - 101
Target Start/End: Original strand, 6179 - 6245
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgca 101  Q
    ||||||||||||| |||||||||||| |||  | |||||||||||  ||||||| ||||| ||||||    
T  6179 tatcatattatttgtagacattttgttgttacaagctattaacttggatgttgtgagtttgtttgca 6245  T

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Target: scaffold0443 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 113 - 166
Target Start/End: Original strand, 4440 - 4493
Alignment:
Q  113 tacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    ||||||||||||| |||||||||| ||||||| |  |||||||||||| |||||    
T  4440 tacgtttttagcggtgttgaatgatgtaatctcttgatttaaatgaatgaatat 4493  T

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Target: scaffold0372 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 152
Target Start/End: Complemental strand, 9599 - 9474
Alignment:
Q  27 tttaattgtatcatattatttatagacattttgtcgttgtacgctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcga 126  Q
    ||||||| |||||||||| || |  |||||||||||||||| | || ||||||  | || || ||||| || ||||| | ||| | | | |||||| |||    
T  9599 tttaattttatcatattagttgtcaacattttgtcgttgtatgatactaacttggaagtcgtgagtttgttcgcaaactcatcctttccatttttaacga 9500  T
Q  127 tgttgaatgacgtaatctatcaattt 152  Q
    | |||||||| |||||||||||||||    
T  9499 tcttgaatgatgtaatctatcaattt 9474  T

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Target: scaffold0022 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 69 - 166
Target Start/End: Complemental strand, 83322 - 83226
Alignment:
Q  69 gctattaacttaaatgttgtaagtttatttgcaaaattatcatctacgtttttagcgatgttgaatgacgtaatctatcaatttaaatgaataaatat 166  Q
    |||||||||||  ||||||| ||||| || ||| | | ||||| ||||||||||||||| |||||||| ||||||| |  |||| ||||||| |||||    
T  83322 gctattaacttggatgttgtgagtttgttcgcagattcatcatttacgtttttagcgat-ttgaatgatgtaatctcttgatttgaatgaatgaatat 83226  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 71810 - 71766
Alignment:
Q  35 tatcatattatttatagacattttgtcgttgtacgctattaactt 79  Q
    ||||||||||||| ||| ||||||| ||||||| |||||||||||    
T  71810 tatcatattatttgtaggcattttgccgttgtatgctattaactt 71766  T

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