View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17846_low_17 (Length: 230)
Name: NF17846_low_17
Description: NF17846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17846_low_17 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 1413980 - 1414177
Alignment:
| Q |
16 |
actagaataataatagagactctcaatcccttaagaaatacgataaagaatagttttcaagaaaaacattccctttagaattccattggagagaataaaa |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1413980 |
actagaataataatagagactctcaatcccttaagaaatacgataaagaatagttttcaagaaaaacattccctttagaattccattggagagaataaaa |
1414079 |
T |
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| Q |
116 |
ctcttagttgaccaaactatacacacaaaccctcacatgtcatagaatttgtatgtgctattagaagatcaagctaagctagcaagcatataagtaac |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
1414080 |
ctcttagttgaccaaactatacacacaaaccctcacatgtcatagaatttgtatgtgctattagaagatcaagctaagctagcaagcatataagtaac |
1414177 |
T |
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