View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17847_high_8 (Length: 317)
Name: NF17847_high_8
Description: NF17847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17847_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 22 - 302
Target Start/End: Original strand, 37600236 - 37600516
Alignment:
| Q |
22 |
agaagagcataatagaaagagaagaaagtcaaagtcaaatataaaattaatgtattatcaattgttgcatcttgtaactaggggtgagaataagtttgat |
121 |
Q |
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| T |
37600236 |
agaagagcataatagaaagagaagaaagtcaaagtcaaatataaaattaatgtattatcaattgttgcatcttgtaactaggggtgagaataaatttgat |
37600335 |
T |
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| Q |
122 |
gagtctacggtatagtctacgaactcagtttagatcagacnnnnnnnncaaaaacatataaaaccaaggcttttttataagtgtattcaactaaaagata |
221 |
Q |
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| T |
37600336 |
gggtctacggtctagtctacgaacttaatttagattagacttttttttcaaaaacatataaaaccaaggcttttttataagtgtattcaactaaaagata |
37600435 |
T |
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| Q |
222 |
tgcttacatgcgaaaacggagtgagtaatggacaacgtggtttttacaagatgtttcaatcaacctctcaccctgattgtt |
302 |
Q |
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| T |
37600436 |
tgcttacatgcgaaaacggagtgagtaatggacaatgtagtttttacaagatgtttcaatcaacctctcaccctgattgtt |
37600516 |
T |
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