View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17847_high_9 (Length: 310)
Name: NF17847_high_9
Description: NF17847
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17847_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 32505287 - 32504996
Alignment:
| Q |
1 |
aactcatacgtaccacccttcaaatgtcatctgccccacccaattgtcaaaccattcacattgttcttgatcttagcacaattaaagtaattcagctatg |
100 |
Q |
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| T |
32505287 |
aactcatacgtaccacccttcaaatgtcatctgccccacccaattgtcaaaccattcacattgttcttgatcttagcacaattaaagtaattcagctttg |
32505188 |
T |
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| Q |
101 |
aaattttttaaccattgaggaatcatgcatgataaagggaagggtaatagcaatttaatgagatgagctgtatgataagctagttctgtgattttctaat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32505187 |
aaattttttaaccattgaggaatcatgcatgataaagagaagggtaatagcaatttaatgagatgagctgtatgataagctagttctgtgattttctaat |
32505088 |
T |
|
| Q |
201 |
taagtgctattgttatgcatggttttgagctctgcttgtatttgattatttgaacccaccctacaacatcacactttaatgtgatagtacccgat |
295 |
Q |
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|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32505087 |
taagtgctattgttatgcatggttttgatct---cttgtatttgattatttgaacccaccctacaacatcacactttaatgtgatagtacccgat |
32504996 |
T |
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