View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17849_high_2 (Length: 218)

Name: NF17849_high_2
Description: NF17849
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17849_high_2
NF17849_high_2
[»] chr2 (14 HSPs)
chr2 (141-203)||(7431903-7431965)
chr2 (47-83)||(7431812-7431848)
chr2 (144-188)||(12734921-12734965)
chr2 (144-185)||(8181004-8181045)
chr2 (141-198)||(45077940-45077997)
chr2 (144-188)||(227410-227454)
chr2 (141-177)||(1765625-1765661)
chr2 (144-188)||(3635340-3635384)
chr2 (144-188)||(4807816-4807860)
chr2 (144-188)||(12474944-12474988)
chr2 (144-188)||(17670689-17670733)
chr2 (144-188)||(28508899-28508943)
chr2 (144-188)||(30306253-30306297)
chr2 (144-188)||(38452703-38452747)
[»] chr6 (7 HSPs)
chr6 (144-183)||(10098913-10098952)
chr6 (144-188)||(28085597-28085641)
chr6 (144-188)||(3206476-3206520)
chr6 (144-180)||(30031485-30031521)
chr6 (144-188)||(31819052-31819096)
chr6 (144-188)||(34143782-34143826)
chr6 (144-188)||(34156398-34156442)
[»] chr5 (9 HSPs)
chr5 (144-198)||(14667982-14668036)
chr5 (144-198)||(20456984-20457038)
chr5 (144-188)||(408511-408555)
chr5 (144-188)||(2915513-2915557)
chr5 (144-180)||(9234115-9234151)
chr5 (144-188)||(13561403-13561447)
chr5 (144-188)||(29816603-29816647)
chr5 (144-188)||(30213796-30213840)
chr5 (144-188)||(38685188-38685232)
[»] chr7 (15 HSPs)
chr7 (144-188)||(22349841-22349885)
chr7 (144-188)||(37618166-37618210)
chr7 (144-185)||(31005429-31005470)
chr7 (144-188)||(2885739-2885783)
chr7 (144-188)||(6375089-6375133)
chr7 (144-188)||(11594181-11594225)
chr7 (144-188)||(12841292-12841336)
chr7 (144-188)||(28208345-28208389)
chr7 (144-188)||(31682619-31682663)
chr7 (144-188)||(35906218-35906262)
chr7 (144-188)||(36652213-36652257)
chr7 (144-188)||(39906389-39906433)
chr7 (144-188)||(41483708-41483752)
chr7 (144-188)||(45836499-45836543)
chr7 (144-188)||(48919333-48919377)
[»] chr3 (7 HSPs)
chr3 (144-188)||(31566178-31566222)
chr3 (141-183)||(7278690-7278732)
chr3 (144-198)||(24778626-24778680)
chr3 (144-180)||(2133629-2133665)
chr3 (144-188)||(5169053-5169097)
chr3 (144-188)||(12096722-12096766)
chr3 (144-188)||(21862758-21862802)
[»] chr1 (16 HSPs)
chr1 (144-188)||(44751705-44751749)
chr1 (144-198)||(7124352-7124406)
chr1 (144-198)||(10200323-10200377)
chr1 (144-188)||(1210966-1211010)
chr1 (144-188)||(4590549-4590593)
chr1 (144-180)||(7210944-7210980)
chr1 (144-180)||(25715343-25715379)
chr1 (144-188)||(25979248-25979292)
chr1 (144-188)||(29577473-29577517)
chr1 (144-188)||(30202147-30202191)
chr1 (144-192)||(32404543-32404591)
chr1 (144-188)||(43028825-43028869)
chr1 (144-188)||(43240396-43240440)
chr1 (144-180)||(45935379-45935415)
chr1 (144-188)||(46423233-46423277)
chr1 (144-188)||(49347410-49347454)
[»] chr4 (15 HSPs)
chr4 (144-203)||(44719378-44719437)
chr4 (144-179)||(50471757-50471792)
chr4 (144-183)||(56375516-56375555)
chr4 (144-198)||(26024867-26024921)
chr4 (144-185)||(47265212-47265253)
chr4 (144-188)||(4441074-4441118)
chr4 (144-188)||(19969402-19969446)
chr4 (144-188)||(21528509-21528553)
chr4 (144-188)||(27450197-27450241)
chr4 (144-188)||(31959831-31959875)
chr4 (144-180)||(39708662-39708698)
chr4 (144-188)||(49939751-49939795)
chr4 (144-188)||(50238632-50238676)
chr4 (144-188)||(50238718-50238762)
chr4 (144-188)||(52569532-52569576)
[»] chr8 (5 HSPs)
chr8 (145-203)||(26642708-26642766)
chr8 (144-198)||(45419446-45419500)
chr8 (144-188)||(11523740-11523784)
chr8 (144-188)||(12491155-12491199)
chr8 (144-188)||(14742099-14742143)
[»] scaffold1318 (1 HSPs)
scaffold1318 (144-188)||(552-596)
[»] scaffold0168 (1 HSPs)
scaffold0168 (144-188)||(28906-28950)


Alignment Details
Target: chr2 (Bit Score: 55; Significance: 9e-23; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 141 - 203
Target Start/End: Original strand, 7431903 - 7431965
Alignment:
Q  141 gctttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctattatat 203  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  7431903 gctttatcccactaagtgaggtcggttgcatggatcaaatgacaccattatgatctattatat 7431965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 7431812 - 7431848
Alignment:
Q  47 tttgcatcattggcatttttaagcatgattcagcctg 83  Q
    |||||||||||||||||||||||||||||||||||||    
T  7431812 tttgcatcattggcatttttaagcatgattcagcctg 7431848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 12734965 - 12734921
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||| |||||||||||||| |||||||    
T  12734965 ttatcccactaagtggggtcgactacatggatcaaattacaccat 12734921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 8181045 - 8181004
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacac 185  Q
    ||||||||||||||| |||||  |||||||||||||||||||    
T  8181045 ttatcccactaagtggggtcggctacatggatcaaatgacac 8181004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 198
Target Start/End: Complemental strand, 45077997 - 45077940
Alignment:
Q  141 gctttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctat 198  Q
    |||||||| ||||||||| ||||| ||||||||||||||| |  |||||||| |||||    
T  45077997 gctttatctcactaagtggggtcggttacatggatcaaattatgccattatgttctat 45077940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 227454 - 227410
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  227454 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 227410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 141 - 177
Target Start/End: Original strand, 1765625 - 1765661
Alignment:
Q  141 gctttatcccactaagtgaggtcgattacatggatca 177  Q
    ||||||||| ||||||||||||||| |||||||||||    
T  1765625 gctttatcctactaagtgaggtcgactacatggatca 1765661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 3635340 - 3635384
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  3635340 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 3635384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 4807860 - 4807816
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  4807860 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 4807816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 12474944 - 12474988
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  12474944 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 12474988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 17670733 - 17670689
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  17670733 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 17670689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 28508943 - 28508899
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  28508943 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 28508899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 30306297 - 30306253
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  30306297 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 30306253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 38452703 - 38452747
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  |||||||||| |||||||||||    
T  38452703 ttatcccactaagtggggtcggctacatggatcgaatgacaccat 38452747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 183
Target Start/End: Original strand, 10098913 - 10098952
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgac 183  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  10098913 ttatcccactaagtggggtcgattacatggatcaaatgac 10098952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 28085641 - 28085597
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||    
T  28085641 ttatcccactaagtggggtcggctacatggatcaaatgacaccat 28085597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 3206476 - 3206520
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  3206476 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 3206520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 30031521 - 30031485
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaat 180  Q
    |||||||||||||||||||||  ||||||||||||||    
T  30031521 ttatcccactaagtgaggtcggctacatggatcaaat 30031485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 31819096 - 31819052
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  31819096 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 31819052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 34143782 - 34143826
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    |||||||| |||||| |||||| ||||||||||||||||| ||||    
T  34143782 ttatcccaataagtggggtcgactacatggatcaaatgacgccat 34143826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 34156398 - 34156442
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    |||||||| |||||| |||||| ||||||||||||||||| ||||    
T  34156398 ttatcccaataagtggggtcgactacatggatcaaatgacgccat 34156442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.00000000008; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 14668036 - 14667982
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctat 198  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||| ||| |||||    
T  14668036 ttatcccactaagtggggtcggttacatggatcaaattacaccataatgttctat 14667982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 20457038 - 20456984
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctat 198  Q
    ||||||||||||||| |||||  ||||||||||||||||| |||| ||| |||||    
T  20457038 ttatcccactaagtggggtcggctacatggatcaaatgacgccataatgttctat 20456984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 408511 - 408555
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  408511 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 408555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 2915513 - 2915557
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  2915513 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 2915557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 9234151 - 9234115
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaat 180  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  9234151 ttatcccactaagtggggtcggttacatggatcaaat 9234115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 13561403 - 13561447
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  13561403 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 13561447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 29816647 - 29816603
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  29816647 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 29816603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 30213840 - 30213796
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  30213840 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 30213796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 38685232 - 38685188
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  38685232 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 38685188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 22349885 - 22349841
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||| ||||||||||||||||| ||||    
T  22349885 ttatcccactaagtggggtcgactacatggatcaaatgacgccat 22349841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 37618210 - 37618166
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||    
T  37618210 ttatcccactaagtggggtcggctacatggatcaaatgacaccat 37618166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 185
Target Start/End: Complemental strand, 31005470 - 31005429
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacac 185  Q
    ||||||||||||||| |||||  |||||||||||||||||||    
T  31005470 ttatcccactaagtggggtcggctacatggatcaaatgacac 31005429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 2885739 - 2885783
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  |||||||||||||| |||||||    
T  2885739 ttatcccactaagtggggtcggctacatggatcaaattacaccat 2885783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 6375133 - 6375089
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  6375133 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 6375089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 11594225 - 11594181
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  11594225 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 11594181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 12841292 - 12841336
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  12841292 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 12841336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 28208345 - 28208389
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  28208345 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 28208389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 31682619 - 31682663
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  31682619 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 31682663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 35906218 - 35906262
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  35906218 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 35906262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 36652257 - 36652213
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  36652257 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 36652213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 39906389 - 39906433
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  39906389 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 39906433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 41483752 - 41483708
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||| ||||||||||    
T  41483752 ttatcccactaagtggggtcggctacatggatcatatgacaccat 41483708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 45836499 - 45836543
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  45836499 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 45836543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 48919377 - 48919333
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    |||||||| |||||| |||||| ||||||||||||||||| ||||    
T  48919377 ttatcccattaagtggggtcgactacatggatcaaatgacgccat 48919333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 31566178 - 31566222
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||    
T  31566178 ttatcccactaagtggggtcggctacatggatcaaatgacaccat 31566222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 183
Target Start/End: Complemental strand, 7278732 - 7278690
Alignment:
Q  141 gctttatcccactaagtgaggtcgattacatggatcaaatgac 183  Q
    |||||||||||||||||| |||||  |||||||||||||||||    
T  7278732 gctttatcccactaagtggggtcggctacatggatcaaatgac 7278690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 24778626 - 24778680
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctat 198  Q
    ||||||||||||||| |||||  |||||||||||||| ||||||| ||| |||||    
T  24778626 ttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctat 24778680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 2133629 - 2133665
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaat 180  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  2133629 ttatcccactaagtggggtcgagtacatggatcaaat 2133665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 5169097 - 5169053
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  5169097 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 5169053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 12096722 - 12096766
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  12096722 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 12096766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 21862758 - 21862802
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||| ||||||||| |||||  ||||||||||||||||||||||    
T  21862758 ttatctcactaagtggggtcggctacatggatcaaatgacaccat 21862802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000001; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 44751749 - 44751705
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    |||||||||||||||||||||  ||||||||||||||||| ||||    
T  44751749 ttatcccactaagtgaggtcggctacatggatcaaatgacgccat 44751705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 7124406 - 7124352
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctat 198  Q
    ||||||||||||||||||||   ||||||||||||| |||||||| ||| |||||    
T  7124406 ttatcccactaagtgaggtcagctacatggatcaaacgacaccataatgctctat 7124352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 10200323 - 10200377
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctat 198  Q
    |||||||| ||||||||||||  |||||||||||||| ||||||| ||| |||||    
T  10200323 ttatcccattaagtgaggtcggctacatggatcaaattacaccatgatgttctat 10200377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 1211010 - 1210966
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  1211010 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 1210966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 4590549 - 4590593
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  |||||||||||||| |||||||    
T  4590549 ttatcccactaagtggggtcggctacatggatcaaattacaccat 4590593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 7210944 - 7210980
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaat 180  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  7210944 ttatcccactaagtggggtcggttacatggatcaaat 7210980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Original strand, 25715343 - 25715379
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaat 180  Q
    |||||||||||||||||||||  ||||||||||||||    
T  25715343 ttatcccactaagtgaggtcggctacatggatcaaat 25715379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 25979248 - 25979292
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  25979248 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 25979292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 29577517 - 29577473
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  29577517 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 29577473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 30202147 - 30202191
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  30202147 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 30202191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 32404543 - 32404591
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccattatg 192  Q
    ||||||||||||||| |||||  |||||||||||||| || ||||||||    
T  32404543 ttatcccactaagtggggtcggctacatggatcaaattacgccattatg 32404591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 43028825 - 43028869
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||    
T  43028825 ttatcccactaagtggggtcgcttacatgaatcaaacgacaccat 43028869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 43240396 - 43240440
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    |||||||||||||||||||||  |||||| |||||||||| ||||    
T  43240396 ttatcccactaagtgaggtcggctacatgaatcaaatgacgccat 43240440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 45935415 - 45935379
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaat 180  Q
    ||||||||||||||||||||  |||||||||||||||    
T  45935415 ttatcccactaagtgaggtccgttacatggatcaaat 45935379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 46423233 - 46423277
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  46423233 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 46423277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 49347410 - 49347454
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  49347410 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 49347454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 32; Significance: 0.000000005; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 44719378 - 44719437
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctattatat 203  Q
    ||||||||||||||  |||||  ||||||||||||| |||||||| ||| ||||||||||    
T  44719378 ttatcccactaagtagggtcggctacatggatcaaacgacaccataatgctctattatat 44719437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 179
Target Start/End: Complemental strand, 50471792 - 50471757
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaa 179  Q
    ||||||||||||||| ||||||||||||||||||||    
T  50471792 ttatcccactaagtggggtcgattacatggatcaaa 50471757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 183
Target Start/End: Complemental strand, 56375555 - 56375516
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgac 183  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  56375555 ttatcccactaagtgaggtcggctacatggatcaaatgac 56375516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Original strand, 26024867 - 26024921
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctat 198  Q
    |||||||||||||||||||||  ||||||||| |||| ||||||| ||| |||||    
T  26024867 ttatcccactaagtgaggtcggctacatggataaaattacaccataatgttctat 26024921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 47265212 - 47265253
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacac 185  Q
    |||||||||||||||||||||  |||||||||||||| ||||    
T  47265212 ttatcccactaagtgaggtcggctacatggatcaaattacac 47265253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 4441118 - 4441074
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  4441118 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 4441074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 19969446 - 19969402
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  19969446 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 19969402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 21528553 - 21528509
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||| ||||||    
T  21528553 ttatcccactaagtggggtcggctacatggatcaaatgccaccat 21528509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 27450197 - 27450241
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  27450197 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 27450241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 31959831 - 31959875
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  31959831 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 31959875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 180
Target Start/End: Complemental strand, 39708698 - 39708662
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaat 180  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  39708698 ttatcccactaagtggggtcgactacatggatcaaat 39708662  T

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Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 49939751 - 49939795
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  49939751 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 49939795  T

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Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 50238632 - 50238676
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  50238632 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 50238676  T

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Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 50238718 - 50238762
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  50238718 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 50238762  T

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Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 52569532 - 52569576
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  52569532 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 52569576  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 203
Target Start/End: Complemental strand, 26642766 - 26642708
Alignment:
Q  145 tatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctattatat 203  Q
    |||||||||||||  |||| | ||||||||||||| |||||||| ||||||||| ||||    
T  26642766 tatcccactaagttgggtcaactacatggatcaaacgacaccataatgatctatcatat 26642708  T

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Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 45419500 - 45419446
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccattatgatctat 198  Q
    ||||||||||||||| |||||  |||||||||||||| ||||||| ||| |||||    
T  45419500 ttatcccactaagtggggtcggctacatggatcaaattacaccataatgttctat 45419446  T

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Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 11523740 - 11523784
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  11523740 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 11523784  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 12491155 - 12491199
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  12491155 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 12491199  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 14742099 - 14742143
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  14742099 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 14742143  T

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Target: scaffold1318 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Complemental strand, 596 - 552
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  596 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 552  T

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Target: scaffold0168 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 188
Target Start/End: Original strand, 28906 - 28950
Alignment:
Q  144 ttatcccactaagtgaggtcgattacatggatcaaatgacaccat 188  Q
    ||||||||||||||| |||||  ||||||||||||||||| ||||    
T  28906 ttatcccactaagtggggtcggctacatggatcaaatgacgccat 28950  T

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