View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17851_high_4 (Length: 370)

Name: NF17851_high_4
Description: NF17851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17851_high_4
NF17851_high_4
[»] chr6 (31 HSPs)
chr6 (1-353)||(31262233-31262585)
chr6 (258-353)||(34502062-34502157)
chr6 (266-353)||(2330357-2330444)
chr6 (260-350)||(7560482-7560572)
chr6 (258-331)||(13096023-13096096)
chr6 (258-335)||(17231576-17231653)
chr6 (258-350)||(17696308-17696400)
chr6 (258-346)||(3827128-3827215)
chr6 (258-346)||(22920249-22920337)
chr6 (92-233)||(1126150-1126289)
chr6 (158-243)||(5738495-5738578)
chr6 (258-338)||(14969388-14969466)
chr6 (286-353)||(9314089-9314156)
chr6 (266-353)||(31123158-31123244)
chr6 (161-335)||(11410379-11410562)
chr6 (301-353)||(12746568-12746620)
chr6 (160-243)||(28848473-28848554)
chr6 (286-349)||(28117587-28117650)
chr6 (297-353)||(22464173-22464229)
chr6 (156-243)||(23388510-23388595)
chr6 (301-353)||(33679492-33679544)
chr6 (306-353)||(2331049-2331096)
chr6 (219-260)||(20189841-20189882)
chr6 (219-260)||(22146109-22146150)
chr6 (219-260)||(16731042-16731083)
chr6 (309-353)||(5618612-5618656)
chr6 (194-245)||(23007828-23007879)
chr6 (194-245)||(23780485-23780536)
chr6 (197-243)||(9953634-9953680)
chr6 (301-350)||(28894788-28894837)
chr6 (301-349)||(35027441-35027489)
[»] chr4 (24 HSPs)
chr4 (157-353)||(10385575-10385765)
chr4 (185-353)||(11702891-11703067)
chr4 (258-355)||(10247522-10247619)
chr4 (185-351)||(33400638-33400800)
chr4 (266-353)||(11560541-11560628)
chr4 (266-353)||(23653009-23653095)
chr4 (258-346)||(3734034-3734122)
chr4 (258-338)||(18859497-18859577)
chr4 (258-346)||(49636833-49636921)
chr4 (258-346)||(49640126-49640214)
chr4 (92-226)||(19864914-19865046)
chr4 (168-243)||(5670200-5670273)
chr4 (258-316)||(17670123-17670181)
chr4 (92-233)||(19859943-19860082)
chr4 (159-243)||(27013892-27013974)
chr4 (168-243)||(5672519-5672592)
chr4 (301-353)||(56089618-56089670)
chr4 (202-260)||(24605620-24605678)
chr4 (169-243)||(49270362-49270435)
chr4 (159-225)||(5681058-5681122)
chr4 (258-316)||(3719836-3719894)
chr4 (258-335)||(14701626-14701703)
chr4 (301-350)||(26703798-26703847)
chr4 (154-238)||(37103631-37103713)
[»] chr5 (25 HSPs)
chr5 (185-353)||(34653059-34653235)
chr5 (157-346)||(2452949-2453144)
chr5 (258-353)||(19685887-19685984)
chr5 (258-353)||(19689270-19689367)
chr5 (154-349)||(26547698-26547903)
chr5 (154-349)||(26551257-26551462)
chr5 (258-338)||(28562679-28562759)
chr5 (258-338)||(28566247-28566327)
chr5 (258-346)||(4732143-4732231)
chr5 (286-353)||(17944398-17944465)
chr5 (258-349)||(25185105-25185196)
chr5 (157-243)||(28441545-28441629)
chr5 (54-108)||(40885369-40885423)
chr5 (301-353)||(33920904-33920956)
chr5 (158-243)||(22937348-22937431)
chr5 (149-243)||(43491367-43491468)
chr5 (301-349)||(1810717-1810765)
chr5 (185-260)||(3194835-3194911)
chr5 (301-353)||(9690525-9690577)
chr5 (154-233)||(21333102-21333179)
chr5 (154-233)||(21336118-21336195)
chr5 (185-233)||(32837674-32837722)
chr5 (301-347)||(26337745-26337791)
chr5 (258-335)||(26726667-26726744)
chr5 (325-353)||(3194945-3194973)
[»] chr2 (20 HSPs)
chr2 (185-353)||(1503737-1503912)
chr2 (185-353)||(1506941-1507116)
chr2 (185-353)||(38326005-38326184)
chr2 (185-353)||(38326575-38326754)
chr2 (92-233)||(38005604-38005743)
chr2 (258-346)||(18938615-18938703)
chr2 (161-336)||(15704290-15704475)
chr2 (161-336)||(15719544-15719729)
chr2 (142-353)||(4577447-4577667)
chr2 (92-185)||(30275124-30275217)
chr2 (266-341)||(18011677-18011752)
chr2 (161-335)||(29435365-29435548)
chr2 (258-338)||(13518023-13518103)
chr2 (259-338)||(11059516-11059598)
chr2 (92-243)||(38070224-38070371)
chr2 (286-345)||(30719524-30719583)
chr2 (258-316)||(22592235-22592293)
chr2 (161-238)||(26365546-26365621)
chr2 (301-350)||(40678079-40678128)
chr2 (158-233)||(10600575-10600648)
[»] scaffold0214 (3 HSPs)
scaffold0214 (142-353)||(19653-19870)
scaffold0214 (154-353)||(13215-13421)
scaffold0214 (154-353)||(27231-27437)
[»] chr3 (35 HSPs)
chr3 (185-353)||(9154453-9154630)
chr3 (258-353)||(18882933-18883028)
chr3 (258-353)||(9157709-9157803)
chr3 (170-353)||(42354715-42354904)
chr3 (185-353)||(44508446-44508623)
chr3 (194-336)||(25888734-25888885)
chr3 (161-323)||(30158371-30158543)
chr3 (258-350)||(10963127-10963219)
chr3 (258-350)||(10966636-10966728)
chr3 (258-346)||(5887292-5887380)
chr3 (258-346)||(5897276-5897364)
chr3 (258-346)||(10959620-10959708)
chr3 (156-335)||(2279939-2280125)
chr3 (258-346)||(23375038-23375126)
chr3 (279-350)||(20536883-20536954)
chr3 (154-243)||(10884568-10884655)
chr3 (258-338)||(2783840-2783920)
chr3 (258-346)||(29233896-29233984)
chr3 (185-260)||(36037370-36037445)
chr3 (154-243)||(10106995-10107082)
chr3 (301-353)||(4250148-4250200)
chr3 (185-243)||(17532031-17532089)
chr3 (258-335)||(6173672-6173749)
chr3 (188-243)||(26551234-26551289)
chr3 (301-346)||(19868744-19868789)
chr3 (275-319)||(18551405-18551449)
chr3 (185-232)||(55032259-55032306)
chr3 (258-316)||(16314927-16314985)
chr3 (258-316)||(16415093-16415151)
chr3 (258-316)||(18495921-18495979)
chr3 (258-316)||(18516067-18516125)
chr3 (301-350)||(3305612-3305661)
chr3 (194-243)||(17529147-17529196)
chr3 (301-350)||(28327206-28327255)
chr3 (301-350)||(28330531-28330580)
[»] chr8 (23 HSPs)
chr8 (194-353)||(30645119-30645288)
chr8 (154-338)||(5963861-5964055)
chr8 (258-349)||(27863863-27863954)
chr8 (258-335)||(20262276-20262353)
chr8 (258-335)||(21048906-21048983)
chr8 (258-346)||(14187720-14187808)
chr8 (258-341)||(24434752-24434835)
chr8 (161-336)||(18696246-18696431)
chr8 (258-346)||(22653981-22654069)
chr8 (258-341)||(24444798-24444881)
chr8 (154-233)||(45155691-45155768)
chr8 (301-351)||(5827789-5827839)
chr8 (156-243)||(18721692-18721777)
chr8 (161-237)||(25591890-25591964)
chr8 (156-243)||(25595068-25595153)
chr8 (161-243)||(23613169-23613249)
chr8 (306-349)||(31981116-31981159)
chr8 (258-335)||(17543771-17543848)
chr8 (316-353)||(31984767-31984804)
chr8 (295-335)||(452901-452941)
chr8 (197-243)||(10663562-10663608)
chr8 (258-335)||(17013353-17013430)
chr8 (301-350)||(39660264-39660313)
[»] chr7 (23 HSPs)
chr7 (154-349)||(11825664-11825869)
chr7 (185-346)||(22256894-22257064)
chr7 (258-346)||(26182022-26182110)
chr7 (258-346)||(26460186-26460274)
chr7 (258-336)||(20100363-20100441)
chr7 (258-343)||(748356-748441)
chr7 (258-331)||(5827034-5827107)
chr7 (266-341)||(2349202-2349277)
chr7 (158-243)||(10431933-10432016)
chr7 (267-349)||(22232936-22233018)
chr7 (267-349)||(22253721-22253803)
chr7 (142-301)||(23467442-23467608)
chr7 (286-353)||(22083746-22083813)
chr7 (154-349)||(8397464-8397654)
chr7 (154-235)||(26557111-26557191)
chr7 (301-350)||(3541475-3541524)
chr7 (154-224)||(8276614-8276682)
chr7 (258-335)||(710338-710415)
chr7 (258-316)||(23599102-23599160)
chr7 (164-255)||(22233044-22233134)
chr7 (301-350)||(38431155-38431204)
chr7 (301-349)||(12803572-12803620)
chr7 (268-320)||(42606069-42606121)
[»] chr1 (13 HSPs)
chr1 (154-338)||(37641472-37641666)
chr1 (258-347)||(28918093-28918182)
chr1 (258-346)||(16839243-16839331)
chr1 (258-346)||(16849173-16849261)
chr1 (154-243)||(1950865-1950952)
chr1 (258-335)||(17903108-17903185)
chr1 (258-335)||(20964177-20964254)
chr1 (161-335)||(49715985-49716168)
chr1 (161-335)||(49719468-49719651)
chr1 (258-335)||(20981080-20981157)
chr1 (301-350)||(23441591-23441640)
chr1 (258-335)||(24200564-24200641)
chr1 (301-350)||(33898088-33898137)
[»] scaffold0360 (2 HSPs)
scaffold0360 (158-335)||(2092-2261)
scaffold0360 (158-335)||(5922-6087)
[»] scaffold0062 (2 HSPs)
scaffold0062 (161-336)||(53202-53387)
scaffold0062 (161-336)||(68101-68286)
[»] scaffold0067 (1 HSPs)
scaffold0067 (258-338)||(27082-27162)
[»] scaffold0134 (1 HSPs)
scaffold0134 (286-353)||(6985-7052)
[»] scaffold0381 (1 HSPs)
scaffold0381 (158-243)||(5810-5893)
[»] scaffold0035 (1 HSPs)
scaffold0035 (158-243)||(62145-62228)
[»] scaffold0401 (1 HSPs)
scaffold0401 (301-353)||(4021-4073)
[»] scaffold0083 (2 HSPs)
scaffold0083 (301-353)||(52881-52933)
scaffold0083 (301-353)||(29084-29136)
[»] scaffold0043 (1 HSPs)
scaffold0043 (301-353)||(13354-13406)
[»] scaffold0014 (1 HSPs)
scaffold0014 (316-353)||(227125-227162)
[»] scaffold0012 (2 HSPs)
scaffold0012 (258-335)||(27200-27277)
scaffold0012 (258-335)||(31386-31463)
[»] scaffold0080 (1 HSPs)
scaffold0080 (197-243)||(26854-26900)
[»] scaffold0273 (1 HSPs)
scaffold0273 (301-350)||(19992-20041)
[»] scaffold0175 (1 HSPs)
scaffold0175 (258-335)||(28981-29058)


Alignment Details
Target: chr6 (Bit Score: 321; Significance: 0; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 353
Target Start/End: Original strand, 31262233 - 31262585
Alignment:
Q  1 agagcattcattcacgttttagagagccgaacagtacatgattacgattggacgattttggaaataaagaggattcattcacgcatggctagaggcacat 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31262233 agagcattcattcacgttttagagagccgaacagtacatgattacgattggacgattttggaaacaaagaggattcattcacgcatggctagaggcacat 31262332  T
Q  101 ggatttagagaaacaacatcaacagtagcgcaaagaagataaattgaagagtgaagccggcaacgatggaactctattggtttatattttctctactatg 200  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31262333 ggatttagagaaacaacatcaacaatagcgcaaagaagataaattgaagagtgaagccggcaacgatggaactctattggtttatattttctctactatg 31262432  T
Q  201 ttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctatgaattagtagttgaaactctctttattatcaattttattc 300  Q
    |||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  31262433 ttgtttatttctttaatcatatctaactaatttcctttgattaagccaagatgaatctatgaattagtatttgaaactctctttattatcaattttattc 31262532  T
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
     |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31262533 ggtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcat 31262585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 34502062 - 34502157
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34502062 tatgaatcagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcat 34502157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 2330357 - 2330444
Alignment:
Q  266 agtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||||| |||||||    
T  2330357 agtagttgaagctctctttattatcaatattattcagtctttattcataattatttgtgttcattgtttttcatatgattatttgcat 2330444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 260 - 350
Target Start/End: Complemental strand, 7560572 - 7560482
Alignment:
Q  260 tgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||| || ||||| ||||||||||||    
T  7560572 tgaatcagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttatgttcagtgtttttcttatgattgtttg 7560482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 13096096 - 13096023
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattg 331  Q
    ||||||||||||||||| |||||||||||||  ||| |||||||||||||||||||||||| ||||||||||||    
T  13096096 tatgaattagtagttgatactctctttattaataatgttattcagtctttattcagaattacttgtattcattg 13096023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 17231576 - 17231653
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    |||||||||||||| || |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||    
T  17231576 tatgaattagtagtcgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttt 17231653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 17696308 - 17696400
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaatt-ttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    ||||||| |||||||||| |||||||||||||||||  |||||||||||||||| |||||||||||| ||||| ||||||||||||| ||||||    
T  17696308 tatgaatcagtagttgaa-ctctctttattatcaatgattattcagtctttatttagaattatttgtgttcatcgcttttcatatgactgtttg 17696400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 3827215 - 3827128
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||| |||| |||| ||||    
T  3827215 tatgaattagtagttgatactct-tttattattaatgttattcagtctttattcagaattatttgtatttattgttttttatataattg 3827128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 22920249 - 22920337
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| |||||||||||||||||||| |||||||| ||||||||||||||||| ||||    
T  22920249 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagagttatttgtgttcattgcttttcatataattg 22920337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 92 - 233
Target Start/End: Complemental strand, 1126289 - 1126150
Alignment:
Q  92 gaggcacatggatttagagaaacaacatcaacagtagcgcaaagaagataaattgaagagtgaagccggcaacgatggaactctattggtttatattttc 191  Q
    ||||||||| | | |||| ||||||||||||||||||| | | ||||| ||||||| |||| ||||||||||||| |||||||||| ||||  |||| |     
T  1126289 gaggcacatagttatagaaaaacaacatcaacagtagcacgaggaagagaaattgaggagtaaagccggcaacgacggaactctatcggtt--tattgtt 1126192  T
Q  192 tctactatgttgtttatttctttaatcatgtctagttaattt 233  Q
    | |||||||||||||||| |||| |  |||||||| ||||||    
T  1126191 tttactatgttgtttattccttttactatgtctagctaattt 1126150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 5738578 - 5738495
Alignment:
Q  158 cggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||| |||||||||| |||||||  ||||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  5738578 cggcaacgacggaactctatcggtttat--tttctttactatgttgtttattattttaatcatgtctagctaatttcctttgatta 5738495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 14969388 - 14969466
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttca 338  Q
    ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||  ||||||||||||||    
T  14969388 tatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttg--ttcattgcttttca 14969466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 9314156 - 9314089
Alignment:
Q  286 ttatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||| | ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  9314156 ttatcaatataattcagtctttattcagaattatttatgttcattgctttttatatgattgtttgcat 9314089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 31123158 - 31123244
Alignment:
Q  266 agtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||||| ||||||||||||| |||  |||  ||||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  31123158 agtagttgaa-ctctctttattataaatgatatgtagtctttattcagaattatttgttttcattgcttttattatgattgtttgcat 31123244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 161 - 335
Target Start/End: Original strand, 11410379 - 11410562
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcct---ttgattaagccaagatgaatc 257  Q
    |||||| |||||||||| |||||||  ||||| ||||||||||||||||| ||| ||||||||||| |||  || |   |||||| ||||| |||||| |    
T  11410379 caacgacggaactctatcggtttat--tttctttactatgttgtttatttatttgatcatgtctagctaaactcttagtttgattgagccatgatgaacc 11410476  T
Q  258 t---------atgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    |         |||||||||||||||| |||||||| ||||  ||| |||||||||||||||||||||||| |||| | |||||||||    
T  11410477 tttgtaatatatgaattagtagttgatactctctt-attaataatgttattcagtctttattcagaattacttgtgtccattgcttt 11410562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 12746568 - 12746620
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  12746568 agtctttattcagaattatttgtgttcattgcttttcgtatgattgtttgcat 12746620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 28848473 - 28848554
Alignment:
Q  160 gcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||||||||| || | |||||  ||||| ||||||||||||||| | ||| ||||||||||||||||||||||||||||    
T  28848473 gcaacgatggaactccatcgatttat--tttctttactatgttgtttatgtatttgatcatgtctagttaatttcctttgatta 28848554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 349
Target Start/End: Original strand, 28117587 - 28117650
Alignment:
Q  286 ttatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    |||||||| | ||||||||||||||||||||||||| | |||||||||||| ||||||||||||    
T  28117587 ttatcaatataattcagtctttattcagaattatttatgttcattgctttttatatgattgttt 28117650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 297 - 353
Target Start/End: Original strand, 22464173 - 22464229
Alignment:
Q  297 attcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||| ||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  22464173 attcagtttttattcagaattatttatgttcattgctttttatatgattgtttgcat 22464229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 23388595 - 23388510
Alignment:
Q  156 gccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||| |||||| | |||||||| |||||||  ||||| ||||||||||||||| | ||||| ||||||||| ||||||||||||||||    
T  23388595 gccgacaacgacgaaactctatcggtttat--tttctttactatgttgtttatgtatttaaccatgtctagctaatttcctttgatta 23388510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 33679544 - 33679492
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||||| |||||||||||| ||||||||||||| |||||||||||||||    
T  33679544 agtctttatttagaattatttgtgttcattgcttttcgtatgattgtttgcat 33679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 353
Target Start/End: Original strand, 2331049 - 2331096
Alignment:
Q  306 ttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||    
T  2331049 ttattcataattatttgtgttcattgcttttcatatgattgtttgcat 2331096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Complemental strand, 20189882 - 20189841
Alignment:
Q  219 atgtctagttaatttcctttgattaagccaagatgaatctat 260  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  20189882 atgtctagctaatttcctttgattaagccaagatgaatctat 20189841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 22146109 - 22146150
Alignment:
Q  219 atgtctagttaatttcctttgattaagccaagatgaatctat 260  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  22146109 atgtctagctaatttcctttgattaagccaagatgaatctat 22146150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 16731042 - 16731083
Alignment:
Q  219 atgtctagttaatttcctttgattaagccaagatgaatctat 260  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  16731042 atgtctagctaatttcctttgattaagccaaggtgaatctat 16731083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 309 - 353
Target Start/End: Complemental strand, 5618656 - 5618612
Alignment:
Q  309 ttcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||| |||||||||| || ||||||||||||||||||||||||||    
T  5618656 ttcataattatttgtgtttattgcttttcatatgattgtttgcat 5618612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 245
Target Start/End: Original strand, 23007828 - 23007879
Alignment:
Q  194 tactatgttgtttatttctttaatcatgtctagttaatttcctttgattaag 245  Q
    ||||| |||||||||| |||||||||||||||  |||| |||||||||||||    
T  23007828 tactacgttgtttattcctttaatcatgtctaactaatctcctttgattaag 23007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 194 - 245
Target Start/End: Complemental strand, 23780536 - 23780485
Alignment:
Q  194 tactatgttgtttatttctttaatcatgtctagttaatttcctttgattaag 245  Q
    ||||| |||||||||| |||||||||||||||  |||| |||||||||||||    
T  23780536 tactacgttgtttattcctttaatcatgtctaactaatctcctttgattaag 23780485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 9953634 - 9953680
Alignment:
Q  197 tatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||||||||||| | ||||| ||||||||| ||||||||||||||||    
T  9953634 tatgttgtttatgtatttaaccatgtctagctaatttcctttgatta 9953680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 28894837 - 28894788
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  28894837 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 28894788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 35027489 - 35027441
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    |||||||||||||||||||||||  | | |||||||| |||||||||||    
T  35027489 agtctttattcagaattatttgtgcttaatgcttttcttatgattgttt 35027441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 157 - 353
Target Start/End: Original strand, 10385575 - 10385765
Alignment:
Q  157 ccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaat 256  Q
    |||||||||| ||||||||||   ||||| |||| |  |||||||||||| |||||||| ||||||||||||||||  |||||||| ||||| |||        
T  10385575 ccggcaacgacggaactctatgaatttatttttttt--actatgttgtttgtttctttattcatgtctagttaattctctttgattgagccatgata--- 10385669  T
Q  257 ctatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
     |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  10385670 -tatgaattagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgcttgcat 10385765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 185 - 353
Target Start/End: Complemental strand, 11703067 - 11702891
Alignment:
Q  185 tattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat-gaatta-------gtagttgaaa 276  Q
    |||||||| ||||||||||||||||| ||||||||||||||| |||||  |||||||| ||||| ||| || |||| | | ||       ||||||||||    
T  11703067 tattttctttactatgttgtttatttatttaatcatgtctagctaattctctttgattgagccatgataaacctattgtaatatatgaatgtagttgaaa 11702968  T
Q  277 ctctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  11702967 ctctctttattatcaatattattcagtctttattcagaataatttgtgttcattgcttttcatatgattgtttgcat 11702891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 258 - 355
Target Start/End: Original strand, 10247522 - 10247619
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcattg 355  Q
    ||||||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  10247522 tatgaatcagtagttaaaactctttttattatcaatattattcagtctttattcagaattatctgtgttcattgcctttcatatgattgtttgcattg 10247619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 185 - 351
Target Start/End: Complemental strand, 33400800 - 33400638
Alignment:
Q  185 tattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctatgaattagtagttgaaactctcttt 284  Q
    |||||||| |||||||||||||||| |||||||||||||||  ||||| ||||||||| | |||  ||||| |||| |  ||  | ||| ||||||||||    
T  33400800 tattttctttactatgttgtttatt-ctttaatcatgtctatctaattccctttgattgaaccataatgaacctatta--taaaa-ttggaactctcttt 33400705  T
Q  285 attatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgc 351  Q
     |||||||| |||||| |||||||||||||||||||| | || ||||||||||||||||||||||||    
T  33400704 gttatcaatattattcggtctttattcagaattatttatgttaattgcttttcatatgattgtttgc 33400638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 11560541 - 11560628
Alignment:
Q  266 agtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||||||||||||||||||||||| |||| || |||||||||| |||||||||| ||||||||||||  |||||||||||||||    
T  11560541 agtagttgaaactctctttattatcaatgttatacaatctttattcaaaattatttgtgttcattgcttttattatgattgtttgcat 11560628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 266 - 353
Target Start/End: Original strand, 23653009 - 23653095
Alignment:
Q  266 agtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||  |||||||||||||||    
T  23653009 agtagttgaa-ctctctttattatcaatgttattcaatctttattcagaattatttgtgttcattgcttttattatgattgtttgcat 23653095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 3734034 - 3734122
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  3734034 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 3734122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 18859497 - 18859577
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttca 338  Q
    ||||||||||||||||| |||||||||||||| ||  |||||||||||||||||||||||| |||| ||||||||||||||    
T  18859497 tatgaattagtagttgatactctctttattattaaaattattcagtctttattcagaattacttgtgttcattgcttttca 18859577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 49636921 - 49636833
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  49636921 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 49636833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 49640214 - 49640126
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  49640214 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 49640126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 92 - 226
Target Start/End: Complemental strand, 19865046 - 19864914
Alignment:
Q  92 gaggcacatggatttagagaaacaacatcaacagtagcgcaaagaagataaattgaagagtgaagccggcaacgatggaactctattggtttatattttc 191  Q
    ||||||||||| | |||| ||||||||||||||||||| | | ||||| ||||| | |||| ||||| ||||||| |||||||||| ||||  |||||||    
T  19865046 gaggcacatggttatagaaaaacaacatcaacagtagcacgaggaagagaaattaaggagtaaagccagcaacgacggaactctatcggtt--tattttc 19864949  T
Q  192 tctactatgttgtttatttctttaatcatgtctag 226  Q
    | |||||| ||||||||| ||||||  ||||||||    
T  19864948 tttactatcttgtttattcctttaactatgtctag 19864914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 5670200 - 5670273
Alignment:
Q  168 ggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||||||||| |||||||  ||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  5670200 ggaactctatcggtttat--tttctttgctatgttgtttatttctttaatcatgtctagctaatttcctttgatta 5670273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 17670123 - 17670181
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaat 316  Q
    ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||    
T  17670123 tatgaattagtagttgatactctctttattattaatgttattcagtctttattcagaat 17670181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 92 - 233
Target Start/End: Complemental strand, 19860082 - 19859943
Alignment:
Q  92 gaggcacatggatttagagaaacaacatcaacagtagcgcaaagaagataaattgaagagtgaagccggcaacgatggaactctattggtttatattttc 191  Q
    ||||||| ||| | |||| ||||||||||||||||||| | | ||||| ||||||| |||| ||||||||||||| ||||||  || ||||  |||||||    
T  19860082 gaggcacgtggttatagaaaaacaacatcaacagtagcacgaggaagagaaattgaggagtaaagccggcaacgacggaacttcatcggtt--tattttc 19859985  T
Q  192 tctactatgttgtttatttctttaatcatgtctagttaattt 233  Q
    | |||||| ||||||| | ||||||  |||||||| ||||||    
T  19859984 tttactatattgtttagtcctttaactatgtctagctaattt 19859943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 27013892 - 27013974
Alignment:
Q  159 ggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||||||| |||||||||| | |||||  ||||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  27013892 ggcaacgacggaactctatcgatttat--tttctttactatgttgtttattattttaatcatgtctagctaatttcctttgatta 27013974  T

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Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 243
Target Start/End: Original strand, 5672519 - 5672592
Alignment:
Q  168 ggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||||||||| |||||||  ||||| | ||||||||||||||||||||||||||||||| |||||| |||||||||    
T  5672519 ggaactctatcggtttat--tttctttgctatgttgtttatttctttaatcatgtctagctaattttctttgatta 5672592  T

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Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 301 - 353
Target Start/End: Complemental strand, 56089670 - 56089618
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  56089670 agtctttattcagaattatttgtgttcattgcttttcgtatgattgtttgcat 56089618  T

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Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 24605678 - 24605620
Alignment:
Q  202 tgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat 260  Q
    |||| |||||||||||||||  ||| |||||||||||||||||||||||||||||||||    
T  24605678 tgttaatttctttaatcatgcgtagctaatttcctttgattaagccaagatgaatctat 24605620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 169 - 243
Target Start/End: Original strand, 49270362 - 49270435
Alignment:
Q  169 gaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||||||||||| |||| | |||||| |||||||||  ||||||||||||||| ||||||||||||||||    
T  49270362 gaactctattggtttatttttttt-tactatattgtttattattttaatcatgtctagctaatttcctttgatta 49270435  T

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Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 225
Target Start/End: Original strand, 5681058 - 5681122
Alignment:
Q  159 ggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtcta 225  Q
    |||||||| |||||||||| |||||||  ||||| |||||| ||||||||||||||| |||||||||    
T  5681058 ggcaacgacggaactctatcggtttat--tttctttactatattgtttatttctttattcatgtcta 5681122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 3719894 - 3719836
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaat 316  Q
    ||||| ||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||    
T  3719894 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaat 3719836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 14701626 - 14701703
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||| | ||||||||  |||  ||| |||||||||||||||||||||| | |||| || ||||||||    
T  14701626 tatgatttagtagttaatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgcttt 14701703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 26703847 - 26703798
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  26703847 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 26703798  T

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Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 37103713 - 37103631
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttccttt 238  Q
    ||||||||||||  | |||||||| |||||||  ||||| || |||||||||||||  ||| ||||||||||| |||||| ||||    
T  37103713 aagccggcaacggcgaaactctatcggtttat--tttctttattatgttgtttattctttttatcatgtctagctaattttcttt 37103631  T

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Target: chr5 (Bit Score: 98; Significance: 3e-48; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 185 - 353
Target Start/End: Complemental strand, 34653235 - 34653059
Alignment:
Q  185 tattttctctactatgttgtttatt-tctttaatcatgtctagttaatttcctttgattaagccaaga------tg-aatctatgaattagtagttgaaa 276  Q
    |||||||| |||||||||||||||| | ||||||||||||||| ||||| | ||||||| ||||| ||      || ||| |||||||||||||||||||    
T  34653235 tattttctttactatgttgtttattctttttaatcatgtctagctaattccatttgattgagccatgaatctattgtaatatatgaattagtagttgaaa 34653136  T
Q  277 ctctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  34653135 ctctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcat 34653059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 157 - 346
Target Start/End: Original strand, 2452949 - 2453144
Alignment:
Q  157 ccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaat 256  Q
    |||||||||| |||||||||| | |||||  ||||| ||||||||||||  |||||||| | |||||||| ||||| ||||||||| ||||| ||||||     
T  2452949 ccggcaacgacggaactctatggatttat--tttctttactatgttgttg-tttctttattaatgtctagctaattccctttgattgagccatgatgaac 2453045  T
Q  257 ctat----------gaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||          |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2453046 ctattgtaatatatgaattagtagttgaaactct-tttattatcaatattattcagtctttattcagaattatttgtattcattgcttttcatatgattg 2453144  T

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Target: chr5; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 19685887 - 19685984
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttc--atatgattgtttgcat 353  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  19685887 tatgaatcagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatatgattgtttgcat 19685984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 19689270 - 19689367
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttc--atatgattgtttgcat 353  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||    
T  19689270 tatgaatcagtagttgaaactctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatatgattgtttgcat 19689367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 349
Target Start/End: Original strand, 26547698 - 26547903
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctt--tgattaagccaaga 251  Q
    ||||||||||||| |||||||||| |||||||  ||| | |  |||||||||||||  ||| ||||||||||| ||||||||||  ||||||||||| ||    
T  26547698 aagccggcaacgacggaactctatcggtttattgtttttat--tatgttgtttattcgtttgatcatgtctagctaatttccttgttgattaagccatga 26547795  T
Q  252 tgaatctat----------gaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatat 341  Q
    |||| ||||          |||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||||| ||    
T  26547796 tgaacctattttaatatatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttcagat 26547895  T
Q  342 gattgttt 349  Q
     |||||||    
T  26547896 aattgttt 26547903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 349
Target Start/End: Original strand, 26551257 - 26551462
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctt--tgattaagccaaga 251  Q
    ||||||||||||| |||||||||| |||||||  ||| | |  |||||||||||||  ||| ||||||||||| ||||||||||  ||||||||||| ||    
T  26551257 aagccggcaacgacggaactctatcggtttattgtttttat--tatgttgtttattcgtttgatcatgtctagctaatttccttgttgattaagccatga 26551354  T
Q  252 tgaatctat----------gaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatat 341  Q
    |||| ||||          |||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||||| ||    
T  26551355 tgaacctattttaatatatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttcagat 26551454  T
Q  342 gattgttt 349  Q
     |||||||    
T  26551455 aattgttt 26551462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 28562759 - 28562679
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttca 338  Q
    ||||||| |||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  28562759 tatgaatcagtagttgatcctctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttca 28562679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 28566327 - 28566247
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttca 338  Q
    ||||||| |||||||||  ||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  28566327 tatgaatcagtagttgatcctctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttca 28566247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 4732231 - 4732143
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||| |||||||||   |||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||| |||| ||||    
T  4732231 tatgaatcagtagttgatcttctctttattattaatcttattcagtctttattcagaattacttgtgttcattgctttttatataattg 4732143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 17944398 - 17944465
Alignment:
Q  286 ttatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||| | ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  17944398 ttatcaatataattcagtctttattcagaattatttatgttcattgctttttatatgattgtttgcat 17944465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 349
Target Start/End: Original strand, 25185105 - 25185196
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    ||||||| ||||||||| ||||||||| |||| ||| ||||||| |||||||| |||| || |||| |||||||||||| ||||||||||||    
T  25185105 tatgaatcagtagttgatactctctttgttattaatattattcaatctttatttagaaatacttgtgttcattgctttttatatgattgttt 25185196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 28441629 - 28441545
Alignment:
Q  157 ccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||||||||| |||||||||| |||||||  ||||| ||||| |||||||||||||||| |||||||||| |||||||||| |||||    
T  28441629 ccggcaacgacggaactctatcggtttat--tttctttactacgttgtttatttctttattcatgtctagctaatttccttggatta 28441545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 54 - 108
Target Start/End: Complemental strand, 40885423 - 40885369
Alignment:
Q  54 gattttggaaataaagaggattcattcacgcatggctagaggcacatggatttag 108  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  40885423 gattttagaaagaaagaggattcattcacgcatggctagaggcacatggatttag 40885369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 33920904 - 33920956
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  33920904 agtctttattcagaattatttgtgttcattgcttttcgtatgattgtttgcat 33920956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 22937431 - 22937348
Alignment:
Q  158 cggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||| |||||||||| |||||||  ||||| ||||||||||||||||  ||||||||||||||| |||||||  |||||||    
T  22937431 cggcaacgacggaactctatcggtttat--tttctttactatgttgtttattattttaatcatgtctagctaatttctcttgatta 22937348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 43491367 - 43491468
Alignment:
Q  149 gagtgaagccggcaacgatggaactctattggtttat-------attttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgat 241  Q
    |||| ||||||||||||| |||||||||| |||||||       ||||||| ||||||||||||||| | ||||| ||||||||| |||||||||| |||    
T  43491367 gagtaaagccggcaacgacggaactctatcggtttattttctttattttctttactatgttgtttatgtatttaaccatgtctagctaatttccttggat 43491466  T
Q  242 ta 243  Q
    ||    
T  43491467 ta 43491468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 1810765 - 1810717
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    |||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  1810765 agtctttattgagaattatttgtgttcattgtttttcatatgattgttt 1810717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 260
Target Start/End: Original strand, 3194835 - 3194911
Alignment:
Q  185 tattttctctactatgttgtttatt-tctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat 260  Q
    |||||||| |||||||||||||||| | ||||||||||| ||| ||||| ||||||||| ||||| |||||| ||||    
T  3194835 tattttctttactatgttgtttattctttttaatcatgtatagctaattccctttgattgagccatgatgaacctat 3194911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 9690525 - 9690577
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||||||| |||||||||| ||||||||||||| || ||||||||||||    
T  9690525 agtctttattcataattatttgtgttcattgcttttcgtacgattgtttgcat 9690577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 21333179 - 21333102
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaattt 233  Q
    ||||||||| ||| |||||||||| |||||||  ||||| |||||||||||||||| |||| || |||||||| ||||||    
T  21333179 aagccggcagcgacggaactctatcggtttat--tttctttactatgttgtttattccttttattatgtctagctaattt 21333102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 21336195 - 21336118
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaattt 233  Q
    ||||||||| ||| |||||||||| |||||||  ||||| |||||||||||||||| |||| || |||||||| ||||||    
T  21336195 aagccggcagcgacggaactctatcggtttat--tttctttactatgttgtttattccttttattatgtctagctaattt 21336118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 185 - 233
Target Start/End: Original strand, 32837674 - 32837722
Alignment:
Q  185 tattttctctactatgttgtttatttctttaatcatgtctagttaattt 233  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||||    
T  32837674 tattttctttactatgttgtttatttcttttatcatgtctagctaattt 32837722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 301 - 347
Target Start/End: Original strand, 26337745 - 26337791
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgt 347  Q
    ||||||||||||||||||||||| || |||||||||| |||||||||    
T  26337745 agtctttattcagaattatttgtgtttattgcttttcgtatgattgt 26337791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 26726667 - 26726744
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  ||| ||||| |||||||||||||||| | |||| || ||||||||    
T  26726667 tatgatttagtagttgatactctcttatttaataatattattaagtctttattcagaatcacttgtgtttattgcttt 26726744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 353
Target Start/End: Original strand, 3194945 - 3194973
Alignment:
Q  325 ttcattgcttttcatatgattgtttgcat 353  Q
    |||||||||||||||||||||||||||||    
T  3194945 ttcattgcttttcatatgattgtttgcat 3194973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 87; Significance: 1e-41; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 185 - 353
Target Start/End: Complemental strand, 1503912 - 1503737
Alignment:
Q  185 tattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat-gaatta-------gtagttgaaa 276  Q
    |||||||| ||||||||||||||||| ||||||||||||||| |||||  |||||||| ||||| |||||| |||| | | ||       ||||||||||    
T  1503912 tattttct-tactatgttgtttatttatttaatcatgtctagctaattctctttgattgagccatgatgaacctattgtaatatatgaatgtagttgaaa 1503814  T
Q  277 ctctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  1503813 ctctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgcttgcat 1503737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 185 - 353
Target Start/End: Complemental strand, 1507116 - 1506941
Alignment:
Q  185 tattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat-gaatta-------gtagttgaaa 276  Q
    |||||||| ||||||||||||||||| ||||||||||||||| |||||  |||||||| ||||| |||||| |||| | | ||       ||||||||||    
T  1507116 tattttct-tactatgttgtttatttatttaatcatgtctagctaattctctttgattgagccatgatgaacctattgtaatatatgaatgtagttgaaa 1507018  T
Q  277 ctctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  1507017 ctctctttattatcaatattattcagtctttattcagaattatttgtgttcattgtttttcatatgattgcttgcat 1506941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 185 - 353
Target Start/End: Original strand, 38326005 - 38326184
Alignment:
Q  185 tattttctctactatgttgtttatt-tctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat----------gaattagtagttg 273  Q
    |||||||| ||||| |||||||||| | ||||||||||||||| ||||| ||||||||| ||||| |||||| ||||          |||| ||||||||    
T  38326005 tattttctttactacgttgtttattctttttaatcatgtctagctaattccctttgattgagccatgatgaacctattggaatatatgaatcagtagttg 38326104  T
Q  274 aaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  38326105 aaactttctttattatcaatattattccgtctttattcagaattatttgtgttcattacttttgatatgattgtttgcat 38326184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 185 - 353
Target Start/End: Complemental strand, 38326754 - 38326575
Alignment:
Q  185 tattttctctactatgttgtttatt-tctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat----------gaattagtagttg 273  Q
    |||||||| ||||| |||||||||| | ||||||||||||||| ||||| ||||||||| ||||| |||||| ||||          |||| ||||||||    
T  38326754 tattttctttactacgttgtttattctttttaatcatgtctagctaattccctttgattgagccatgatgaacctattggaatatatgaatcagtagttg 38326655  T
Q  274 aaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||| |||||||||||||| |||||| |||||||||||||||||||||| |||||| ||||| ||||||||||||||||    
T  38326654 aaactttctttattatcaatattattccgtctttattcagaattatttgtgttcattacttttgatatgattgtttgcat 38326575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 92 - 233
Target Start/End: Complemental strand, 38005743 - 38005604
Alignment:
Q  92 gaggcacatggatttagagaaacaacatcaacagtagcgcaaagaagataaattgaagagtgaagccggcaacgatggaactctattggtttatattttc 191  Q
    ||||||||||| | |||| ||||||||||||||||||| | | ||||| ||||||| |||| ||||||||||||| |||||||||| ||||  |||||||    
T  38005743 gaggcacatggttatagaaaaacaacatcaacagtagcacgaggaagagaaattgaggagtaaagccggcaacgacggaactctatcggtt--tattttc 38005646  T
Q  192 tctactatgttgtttatttctttaatcatgtctagttaattt 233  Q
    | |||||||||||||||| ||||||  |||||||| ||||||    
T  38005645 tttactatgttgtttattcctttaactatgtctagctaattt 38005604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 18938615 - 18938703
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  18938615 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 18938703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 336
Target Start/End: Complemental strand, 15704475 - 15704290
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcct---ttgattaagccaagatgaatc 257  Q
    |||||| | |||||||| |||||||  ||||| ||||||||||||||||| ||| ||||||||||||||| ||| |   || ||| ||||| |||||| |    
T  15704475 caacgacgaaactctatcggtttat--tttctttactatgttgtttatttatttgatcatgtctagttaaattcttagtttcattgagccatgatgaacc 15704378  T
Q  258 t---------atgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgctttt 336  Q
    |         ||||||||| |||||| |||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||| ||||    
T  15704377 tttgtaatatatgaattagaagttgatactctctttattattaatgttattcagtctttatttagaattatttgtgttcattgttttt 15704290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 336
Target Start/End: Complemental strand, 15719729 - 15719544
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaa---tttcctttgattaagccaagatg---- 253  Q
    |||||| | |||||||| |||||||  ||||| ||||||||||||||||| ||| |||||||||||||||    ||  ||| ||| ||||| ||||        
T  15719729 caacgacgaaactctatcggtttat--tttctttactatgttgtttatttatttgatcatgtctagttaaattattagtttcattgagccatgatgaacc 15719632  T
Q  254 -----aatctatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgctttt 336  Q
         ||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||||    
T  15719631 tttgtaatatatgaattagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgttttt 15719544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 142 - 353
Target Start/End: Original strand, 4577447 - 4577667
Alignment:
Q  142 aattgaagagtgaagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgat 241  Q
    |||||| |||| ||||||||||||| | | |||||| | |||||  ||||| |||||||||||||||||||||||| |||||||| ||||| ||||||||    
T  4577447 aattgaggagtaaagccggcaacgacgaagctctatcgatttat--tttctttactatgttgtttatttctttaattatgtctagctaattccctttgat 4577544  T
Q  242 taagccaagatgaatctatgaatta------gta----------gttgaaactctctttattatcaattttattcagtctttattcagaattatttgtat 325  Q
    | || || |||||| ||||  ||||      |||          ||||| ||||| |||||||||||| |||||||||   ||||||||||||||||| |    
T  4577545 tgagtcatgatgaacctat--attacctattgtaatatataaatgttgacactctttttattatcaatattattcagt---tattcagaattatttgtgt 4577639  T
Q  326 tcattgcttttcatatgattgtttgcat 353  Q
    |||||||||||||||| |||||||||||    
T  4577640 tcattgcttttcatataattgtttgcat 4577667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 30275217 - 30275124
Alignment:
Q  92 gaggcacatggatttagagaaacaacatcaacagtagcgcaaagaagataaattgaagagtgaagccggcaacgatggaactctattggtttat 185  Q
    ||||||||||| | |||| ||||||||||||||||||| | | ||||| ||||||| |||| ||| ||||||||| |||||||||| |||||||    
T  30275217 gaggcacatggttatagaaaaacaacatcaacagtagcacgaggaagagaaattgaggagtaaagacggcaacgacggaactctatcggtttat 30275124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 18011677 - 18011752
Alignment:
Q  266 agtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatat 341  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||| | ||||| |||| |||||||||||| ||||    
T  18011677 agtagttgatactctctttattattaatgttattcagtctttatttataattacttgtgttcattgctttttatat 18011752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 335
Target Start/End: Original strand, 29435365 - 29435548
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcct---ttgattaagccaagatgaatc 257  Q
    |||||| |||||||||| |||||||  ||||| ||||||||||||||||| ||| ||||||||||| |||  || |   |||||| ||||| |||||| |    
T  29435365 caacgacggaactctatcggtttat--tttctttactatgttgtttatttatttgatcatgtctagctaaactcttagtttgattgagccatgatgaacc 29435462  T
Q  258 t---------atgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    |         |||||||||||||||| | |||||| ||||  |||  ||||||||||||||||||||||| |||| |||||||||||    
T  29435463 tttgtaatatatgaattagtagttgatattctctt-attaataatgctattcagtctttattcagaattacttgtgttcattgcttt 29435548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 13518023 - 13518103
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttca 338  Q
    ||||||| ||||||| |  ||||||||||||| ||| |||||||||||||||||| ||||| |||| ||||| ||||||||    
T  13518023 tatgaatcagtagtttatcctctctttattattaatgttattcagtctttattcaaaattacttgtgttcatagcttttca 13518103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 259 - 338
Target Start/End: Original strand, 11059516 - 11059598
Alignment:
Q  259 atgaattagtagttgaaactctctttattatcaattttat---tcagtctttattcagaattatttgtattcattgcttttca 338  Q
    |||||| ||||||||| |||||||||||||| ||| ||||   |||||||||||||||| ||| |||| ||||||| ||||||    
T  11059516 atgaatcagtagttgatactctctttattattaatgttattattcagtctttattcagagttacttgtgttcattgtttttca 11059598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 92 - 243
Target Start/End: Original strand, 38070224 - 38070371
Alignment:
Q  92 gaggcacatggatttagagaaacaacatcaacagtagcgcaaagaagataaattgaagagtgaagccggcaacgatggaactctattggtttatattttc 191  Q
    ||||||||||||| | || |||||||||||||| ||||| |  ||| | ||||||| |||| |||||  |||||||||||||| || ||   || ||||     
T  38070224 gaggcacatggatatggaaaaacaacatcaacaatagcg-attgaaaagaaattgaggagtaaagcccacaacgatggaactccatcgg---attttttt 38070319  T
Q  192 tctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    | ||| |||||||||||| |||| ||||| ||||| |||||||  |||||||    
T  38070320 tttacgatgttgtttattcctttgatcatatctagctaatttctcttgatta 38070371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 286 - 345
Target Start/End: Original strand, 30719524 - 30719583
Alignment:
Q  286 ttatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgatt 345  Q
    |||||||| | ||||||| |||||||||||||||||   |||||||||||| ||||||||    
T  30719524 ttatcaatataattcagtttttattcagaattatttaagttcattgctttttatatgatt 30719583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Original strand, 22592235 - 22592293
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaat 316  Q
    ||||| ||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||    
T  22592235 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaat 22592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 161 - 238
Target Start/End: Original strand, 26365546 - 26365621
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttccttt 238  Q
    |||||||| |||||||| ||||||| |||| | |  ||||||||||||| |||| ||||||||||| |||||| ||||    
T  26365546 caacgatgaaactctatcggtttattttttttat--tatgttgtttattccttttatcatgtctagctaattttcttt 26365621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 40678128 - 40678079
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  40678128 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 40678079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 158 - 233
Target Start/End: Original strand, 10600575 - 10600648
Alignment:
Q  158 cggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaattt 233  Q
    ||||||||| |||||| ||| |||||||  ||||| |||||| |||||| ||  ||||||||||||||| ||||||    
T  10600575 cggcaacgacggaactttatcggtttat--tttctttactatattgtttgttattttaatcatgtctagctaattt 10600648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214 (Bit Score: 85; Significance: 2e-40; HSPs: 3)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 142 - 353
Target Start/End: Original strand, 19653 - 19870
Alignment:
Q  142 aattgaagagtgaagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgat 241  Q
    |||||| |||| ||||||||||||| | | |||||| |||||||  ||||| |||||||||||||| ||||||||| |||||||| ||||| ||||||||    
T  19653 aattgatgagtaaagccggcaacgacgaagctctatcggtttat--tttctttactatgttgtttaattctttaattatgtctagctaattccctttgat 19750  T
Q  242 taagccaagatgaatctat----------gaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattg 331  Q
    | ||||| |||||| ||||          |||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||| |||||      
T  19751 tgagccatgatgaacctattgtaatatatgaatcagtagttgaaactctctttattatcaatattattcactctttatccagaattatttgtgttcat-- 19848  T
Q  332 cttttcatatgattgtttgcat 353  Q
    |||||||||| |||||||||||    
T  19849 cttttcatattattgtttgcat 19870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 353
Target Start/End: Original strand, 13215 - 13421
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatg 253  Q
    ||||||||||||| | | |||||| |||||||  ||||| ||||||||||||||||| |||||| |||||||| ||||| ||||||||| ||||| ||||    
T  13215 aagccggcaacgacgaagctctatcggtttat--tttctttactatgttgtttatttttttaattatgtctagctaattccctttgattgagccatgatg 13312  T
Q  254 aatctat----------gaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatga 343  Q
    || ||||          |||| |||| |||||||||| |||||||||||| ||||||||||||||| || |||||||||| || | ||||||||||||||    
T  13313 aacctattgtaatatatgaatcagtaattgaaactct-tttattatcaatattattcagtctttatccaaaattatttgtgttaactgcttttcatatga 13411  T
Q  344 ttgtttgcat 353  Q
    || |||||||    
T  13412 ttttttgcat 13421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0214; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 353
Target Start/End: Original strand, 27231 - 27437
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatg 253  Q
    ||||||||||||| | | |||||| |||||||  ||||| ||||||||||||||||| |||||| |||||||| ||||| ||||||||| ||||| ||||    
T  27231 aagccggcaacgacgaagctctatcggtttat--tttctttactatgttgtttatttttttaattatgtctagctaattccctttgattgagccatgatg 27328  T
Q  254 aatctat----------gaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatga 343  Q
    || ||||          |||| |||| |||||||||| |||||||||||| ||||||||||||||| || |||||||||| || | ||||||||||||||    
T  27329 aacctattgtaatatatgaatcagtaattgaaactct-tttattatcaatattattcagtctttatccaaaattatttgtgttaactgcttttcatatga 27427  T
Q  344 ttgtttgcat 353  Q
    || |||||||    
T  27428 ttttttgcat 27437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 2e-37; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 185 - 353
Target Start/End: Original strand, 9154453 - 9154630
Alignment:
Q  185 tattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat----------gaattagtagttga 274  Q
    |||||| | ||||||||||||||| | ||||||||||||||| ||||| ||||||||| ||||| |||||| ||||          |||| |||||||||    
T  9154453 tattttttttactatgttgtttatgtatttaatcatgtctagctaattccctttgattgagccatgatgaacctattgtaatatatgaatcagtagttga 9154552  T
Q  275 aactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    || ||||||||||||| || ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9154553 aa-tctctttattatcgatattactcggtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 9154630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 18882933 - 18883028
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  18882933 tatgaatcagtagttgaaaatctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcat 18883028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 9157709 - 9157803
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9157709 tatgaatcagtagttgaa-ctctctttattatcaatattattcagtctttattcagaattatttgtgttcattgcttttcatatgattgtttgcat 9157803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 170 - 353
Target Start/End: Complemental strand, 42354904 - 42354715
Alignment:
Q  170 aactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat-gaatta-- 266  Q
    |||||||| ||||||| |||| | ||||||||||||| ||| ||||||||||||||| ||||| ||||||||| || || |||||| |||| | | ||      
T  42354904 aactctatcggtttatttttttt-tactatgttgtttctttatttaatcatgtctagctaatt-cctttgattgagtcatgatgaacctattgtaatata 42354807  T
Q  267 -----gtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
         |||||||||| | |||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  42354806 tgaatgtagttgaaattgtctttattatcaatattattcagtctttattcagaatcatttgtgttcattgcttttcatatgattgtttgcat 42354715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 185 - 353
Target Start/End: Original strand, 44508446 - 44508623
Alignment:
Q  185 tattttctctactatgttgtttatt-tctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat----------gaattagtagttg 273  Q
    |||||||| |||||||||||||||| | |||||||  |||||||||||| ||||| ||| ||||| |||||| ||||          |||| |||||||     
T  44508446 tattttctttactatgttgtttattctttttaatc--gtctagttaattccctttaattgagccatgatgaacctattgtaatatatgaatcagtagtta 44508543  T
Q  274 aaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  44508544 aaactctctttattatcaatattattcaatctttattcagaattatttgtgttcattgtttttcatatgattgtttgcat 44508623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 194 - 336
Target Start/End: Complemental strand, 25888885 - 25888734
Alignment:
Q  194 tactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat----------gaattagtagttgaaactctctt 283  Q
    |||||||||||||||| |||||||||||||||| ||||| | ||||||||||||| |||||||||||          |||| ||||||||| ||||||||    
T  25888885 tactatgttgtttattcctttaatcatgtctagctaatt-cttttgattaagccatgatgaatctattgtaatatatgaatcagtagttgatactctctt 25888787  T
Q  284 tattatcaattttattcagtctttattcagaattatttgtattcattgctttt 336  Q
    |||||| ||| |||||||||||||||||||||||| |||| ||||||| ||||    
T  25888786 tattattaatgttattcagtctttattcagaattacttgtgttcattgttttt 25888734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 161 - 323
Target Start/End: Complemental strand, 30158543 - 30158371
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctt--tgattaagccaagatga---- 254  Q
    ||||||||||||||||| |||||||  ||||| || |||||||||||||  ||| ||||||||||| ||||||||||  ||||||||||| |||||        
T  30158543 caacgatggaactctatcggtttat--tttctttattatgttgtttattcgtttgatcatgtctagctaatttccttattgattaagccatgatgaccct 30158446  T
Q  255 ------atctatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgt 323  Q
          || ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| ||||    
T  30158445 attgtaatatatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgt 30158371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 10963127 - 10963219
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    ||||||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  10963127 tatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacgtgtgttcattgcttttcatataattgtttg 10963219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 258 - 350
Target Start/End: Original strand, 10966636 - 10966728
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    ||||||| ||||||||| |||||||||||||| ||| ||||||||||||||||||||||||  ||| ||||||||||||||||| ||||||||    
T  10966636 tatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacgtgtgttcattgcttttcatataattgtttg 10966728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 5887380 - 5887292
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  5887380 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 5887292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 5897364 - 5897276
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  5897364 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 5897276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 10959620 - 10959708
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||| ||||||||| |||||||||||||| ||| |||||||| ||||||||||||||| |||| ||||||||||||||||| ||||    
T  10959620 tatgaatcagtagttgatactctctttattattaatgttattcagcctttattcagaattacttgtgttcattgcttttcatataattg 10959708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 156 - 335
Target Start/End: Complemental strand, 2280125 - 2279939
Alignment:
Q  156 gccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatg-- 253  Q
    ||||||||||| |||| ||||| ||||  |||||||| ||| ||||||||| |||||||| |||||||||| ||||||| | ||||| ||||| ||||      
T  2280125 gccggcaacgacggaattctatcggtt--tattttctttacaatgttgtttgtttctttattcatgtctagctaatttcatatgattgagccatgatgaa 2280028  T
Q  254 -------aatctatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
           ||| ||||| ||||||| ||| ||||||||  |||  ||| ||||||||| ||||||||||||||||||| |||||||||||    
T  2280027 cctttataatatatgatttagtagctgatactctcttatttaataatgttattcagtttttattcagaattatttgtgttcattgcttt 2279939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 23375126 - 23375038
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||| ||||||||||||||||||| ||||||||||||||||| ||||    
T  23375126 tatgaattagtagttgatactctcttatttaataatattattcagtttttattcagaattatttgtgttcattgcttttcatataattg 23375038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 279 - 350
Target Start/End: Complemental strand, 20536954 - 20536883
Alignment:
Q  279 ctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||| ||||||||||||| ||||||||||||    
T  20536954 ctctttattatcaatattatgcagtctttattcaaaattatttgtgttcattgcttttcttatgattgtttg 20536883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 10884568 - 10884655
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||||||| |||||| |||||||||||  ||||| |||||||||||||| |||||| || |||| ||||||||||||||||||||    
T  10884568 aagccggcaacgacggaactttattggtttat--tttctttactatgttgtttaattctttgattatgtttagttaatttcctttgatta 10884655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 2783840 - 2783920
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttca 338  Q
    ||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  2783840 tatgaatgagtagttgatcctctctttagtattaatgttattcagtctttattcagaattacttgtgttcattgcttttca 2783920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 29233984 - 29233896
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| |||||| |  |||  ||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  29233984 tatgaattagtagttgatactctcgtatttaataatattattcagtctttattcagaattatttgtgttcattgtttttcatataattg 29233896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 185 - 260
Target Start/End: Complemental strand, 36037445 - 36037370
Alignment:
Q  185 tattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat 260  Q
    |||||||| || |||||||||||||  || |||||||| ||| |||||||||||||||||||||||||||||||||    
T  36037445 tattttctttattatgttgtttattcattgaatcatgtgtagctaatttcctttgattaagccaagatgaatctat 36037370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 10107082 - 10106995
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||||||| ||||  ||||||||||||  ||||| |||||||||||||| |||||| || |||||||| ||||||||||||||||    
T  10107082 aagccggcaacgacggaatcctattggtttat--tttctttactatgttgtttaattctttgattatgtctagctaatttcctttgatta 10106995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 4250148 - 4250200
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  4250148 agtctttattcagaattatttgtgttcattgcttttcgtatgattgtttgcat 4250200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 17532089 - 17532031
Alignment:
Q  185 tattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||||||| |||||||||| ||||| |||||||||||||||| |||||| |||||||||    
T  17532089 tattttctttactatgttgcttattgctttaatcatgtctagctaattttctttgatta 17532031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 6173749 - 6173672
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  ||| |||||||||||||||||||||| | |||| |||||||||||    
T  6173749 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgttcattgcttt 6173672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 243
Target Start/End: Original strand, 26551234 - 26551289
Alignment:
Q  188 tttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||| ||||||||||||||||||||| ||||||||||| || ||| |||||||||    
T  26551234 tttctttactatgttgtttatttctttcatcatgtctagctatttttctttgatta 26551289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 301 - 346
Target Start/End: Original strand, 19868744 - 19868789
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||||||||| ||  ||||||||||||||||||    
T  19868744 agtctttattcagaattatttgtgtttgttgcttttcatatgattg 19868789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 275 - 319
Target Start/End: Original strand, 18551405 - 18551449
Alignment:
Q  275 aactctctttattatcaattttattcagtctttattcagaattat 319  Q
    |||||||||||||||||||   |||||||||||||||||||||||    
T  18551405 aactctctttattatcaataacattcagtctttattcagaattat 18551449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 232
Target Start/End: Complemental strand, 55032306 - 55032259
Alignment:
Q  185 tattttctctactatgttgtttatttctttaatcatgtctagttaatt 232  Q
    |||||||| |||||||||||||||| |||| ||||||||||| |||||    
T  55032306 tattttctttactatgttgtttattccttttatcatgtctagctaatt 55032259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 16314985 - 16314927
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaat 316  Q
    ||||| ||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||    
T  16314985 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaat 16314927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 16415151 - 16415093
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaat 316  Q
    ||||| ||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||    
T  16415151 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaat 16415093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 18495979 - 18495921
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaat 316  Q
    ||||| ||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||    
T  18495979 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaat 18495921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 18516125 - 18516067
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaat 316  Q
    ||||| ||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||    
T  18516125 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaat 18516067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 3305612 - 3305661
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  3305612 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 3305661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 243
Target Start/End: Complemental strand, 17529196 - 17529147
Alignment:
Q  194 tactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||||||||||||||| ||||||| |||||||  |||||| |||||||||    
T  17529196 tactatgttgtttattgctttaattatgtctacctaattttctttgatta 17529147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 28327206 - 28327255
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  28327206 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 28327255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 28330531 - 28330580
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  28330531 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 28330580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 194 - 353
Target Start/End: Original strand, 30645119 - 30645288
Alignment:
Q  194 tactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatctat----------gaattagtagttgaaactctctt 283  Q
    |||||||||||||||| |||||||||||||||  ||||| ||||||||| ||  | |||||| ||||          |||||| ||||||||||||||||    
T  30645119 tactatgttgtttattcctttaatcatgtctaactaattccctttgattgagttatgatgaacctattgtaatatatgaattaatagttgaaactctctt 30645218  T
Q  284 tattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||| ||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  30645219 tattattaatattatccagtctttattcagaattatttgtgttcattgcttttgatatgattgtttgcat 30645288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 154 - 338
Target Start/End: Original strand, 5963861 - 5964055
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcct--ttgattaagccaaga 251  Q
    ||||||||||||| |||||||||| |||||||  ||||| || |||||||||||||  ||| ||||||||||| |||||||||  |||||||||||| ||    
T  5963861 aagccggcaacgacggaactctatcggtttat--tttctttattatgttgtttattcgtttgatcatgtctagctaatttccttgttgattaagccatga 5963958  T
Q  252 tg----------aatctatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttca 338  Q
    ||          ||| ||||||| ||||||||| ||||||| |||||| |||   |||||||||||||||||||||| |||| ||||||||||||||    
T  5963959 tgatcctattgtaatatatgaatcagtagttgatactctctgtattattaatgcgattcagtctttattcagaattacttgtgttcattgcttttca 5964055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 349
Target Start/End: Complemental strand, 27863954 - 27863863
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  27863954 tatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgctttttatatgattgttt 27863863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 20262276 - 20262353
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||    
T  20262276 tatgaattagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttt 20262353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 21048906 - 21048983
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||    
T  21048906 tatgaattagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttt 21048983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 14187720 - 14187808
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||| |||| ||||    
T  14187720 tatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgctttttatataattg 14187808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 341
Target Start/End: Original strand, 24434752 - 24434835
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatat 341  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  24434752 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatat 24434835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 336
Target Start/End: Complemental strand, 18696431 - 18696246
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcct---ttgattaagccaagatgaatc 257  Q
    |||||| | |||||||| |||||||  ||||| ||||||||||||||||| ||| ||||||||||||||| ||| |   || ||| ||||| |||||| |    
T  18696431 caacgacgaaactctatcggtttat--tttctttactatgttgtttatttatttgatcatgtctagttaaattcttagtttcattgagccatgatgaacc 18696334  T
Q  258 t---------atgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgctttt 336  Q
    |         ||||||||| |||||| |||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||| ||||    
T  18696333 tttgtaatatatgaattagaagttgatactctctttattattaatgttattcagtctttatttagaattatttgtgttcattgttttt 18696246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 22653981 - 22654069
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||| | ||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||||||| |||| ||||    
T  22653981 tatgaatcaatagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgctttttatattattg 22654069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 341
Target Start/End: Original strand, 24444798 - 24444881
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatat 341  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| |||||| ||||||||||    
T  24444798 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcatttcttttcatat 24444881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 45155768 - 45155691
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaattt 233  Q
    ||||||||||||| ||||||||||  ||||||  ||||| ||||||||||||||||||||||||||||||||| ||||||    
T  45155768 aagccggcaacgacggaactctatatgtttat--tttctttactatgttgtttatttctttaatcatgtctagctaattt 45155691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 301 - 351
Target Start/End: Original strand, 5827789 - 5827839
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgc 351  Q
    ||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  5827789 agtctttattcagaattatttgtgttcattgcttttcttatgattgtttgc 5827839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 18721777 - 18721692
Alignment:
Q  156 gccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||| |||||| | |||||||| |||||||  ||||| ||||||||||||||| | ||||| ||||||||| ||||||||||||||||    
T  18721777 gccgacaacgacgaaactctatcggtttat--tttctttactatgttgtttatgtatttaaccatgtctagctaatttcctttgatta 18721692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 25591964 - 25591890
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctt 237  Q
    |||||| | |||||||| |||||||  ||||| ||||||||||||||| | ||||||||||||||| ||||||||||    
T  25591964 caacgacgaaactctatcggtttat--tttctttactatgttgtttatgtatttaatcatgtctagctaatttcctt 25591890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 25595153 - 25595068
Alignment:
Q  156 gccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||| |||||| | |||||||| ||||||| |||| |  |||||||||||||| | ||||||||||||||| |||||||| |||||||    
T  25595153 gccgacaacgacgaaactctatcggtttatttttttt--actatgttgtttatgtatttaatcatgtctagctaatttccattgatta 25595068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 23613169 - 23613249
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||||| | |||||||| |||||||  ||||| ||||||||| ||||| | ||||| ||||||||| ||||||||||||||||    
T  23613169 caacgacgaaactctatcggtttat--tttctttactatgttatttatgtatttaaccatgtctagctaatttcctttgatta 23613249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 306 - 349
Target Start/End: Original strand, 31981116 - 31981159
Alignment:
Q  306 ttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    |||||||||||||||||| ||||||| |||||||||||||||||    
T  31981116 ttattcagaattatttgtgttcattgattttcatatgattgttt 31981159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 17543771 - 17543848
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  ||| |||||||||||||||||||||| | |||| || ||||||||    
T  17543771 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgcttt 17543848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 31984767 - 31984804
Alignment:
Q  316 ttatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  31984767 ttatttgtattcattgcttttcatatgattggttgcat 31984804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 452901 - 452941
Alignment:
Q  295 ttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    |||||||||||||||||||||||| |||| |||||||||||    
T  452901 ttattcagtctttattcagaattacttgtgttcattgcttt 452941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 10663562 - 10663608
Alignment:
Q  197 tatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||||||| |||| ||||||||||| ||| ||||||||||||    
T  10663562 tatgttgtttattcctttgatcatgtctagctaaattcctttgatta 10663608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 17013430 - 17013353
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  |||  ||||||||||||||||||||| | |||| || ||||||||    
T  17013430 tatgatttagtagttgatactctcttatttaataataatattcagtctttattcagaatcacttgtgtttattgcttt 17013353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 39660313 - 39660264
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  39660313 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 39660264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 4e-32; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 154 - 349
Target Start/End: Complemental strand, 11825869 - 11825664
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctt--tgattaagccaaga 251  Q
    ||||||||||||| |||||||||| |||||||  ||||| || |||||||||||||  ||| ||||||||||| ||||||||||  ||||||||||| ||    
T  11825869 aagccggcaacgacggaactctatcggtttat--tttctttattatgttgtttattcgtttgatcatgtctagctaatttccttgttgattaagccatga 11825772  T
Q  252 tgaatctat----------gaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatat 341  Q
    |||| ||||          |||| ||||||||| |||||||||||||| ||| ||||||| |||||||||||||||| |||| |||||| ||||||| ||    
T  11825771 tgaacctattgtaatatatgaatcagtagttgatactctctttattattaatgttattcaatctttattcagaattacttgtgttcattacttttcacat 11825672  T
Q  342 gattgttt 349  Q
     |||||||    
T  11825671 aattgttt 11825664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 185 - 346
Target Start/End: Original strand, 22256894 - 22257064
Alignment:
Q  185 tattttctctactatgttgtttatttc-tttaatcatgtctagttaatttcctttgattaagccaagatgaatctat-gaatta-------gtagttgaa 275  Q
    |||||||| || |||||||||| |||  ||||||||||||||||||||||||||||||| ||||| |||||| |||| | | ||       ||||||||     
T  22256894 tattttctttattatgttgttttttttatttaatcatgtctagttaatttcctttgattgagccatgatgaacctattgtaatatatgaatgtagttgat 22256993  T
Q  276 actctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    |||||||||||||| ||  |||||||||||||||||||||||| |||| |||||||||||| |||| ||||    
T  22256994 actctctttattattaacgttattcagtctttattcagaattacttgtgttcattgctttttatataattg 22257064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 26182022 - 26182110
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  26182022 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 26182110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Original strand, 26460186 - 26460274
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  26460186 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 26460274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 258 - 336
Target Start/End: Original strand, 20100363 - 20100441
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgctttt 336  Q
    ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||    
T  20100363 tatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgctttt 20100441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 343
Target Start/End: Complemental strand, 748441 - 748356
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatga 343  Q
    ||||||| ||||||||| |||||||||||||| ||| |||||| ||||||||||||||||| |||| ||||||| |||| ||||||    
T  748441 tatgaatcagtagttgatactctctttattattaatgttattctgtctttattcagaattacttgtgttcattgttttttatatga 748356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 331
Target Start/End: Complemental strand, 5827107 - 5827034
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattg 331  Q
    ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||||    
T  5827107 tatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattg 5827034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 341
Target Start/End: Original strand, 2349202 - 2349277
Alignment:
Q  266 agtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatat 341  Q
    ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| |||||| ||||| ||||    
T  2349202 agtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcatttctttttatat 2349277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 10431933 - 10432016
Alignment:
Q  158 cggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||| ||||||||| ||||||||  ||||| ||||| |||||||||||||||| |||||||||| |||||||||| |||||    
T  10431933 cggcaacgacggaactctaatggtttat--tttctttactaggttgtttatttctttattcatgtctagctaatttccttggatta 10432016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 267 - 349
Target Start/End: Complemental strand, 22233018 - 22232936
Alignment:
Q  267 gtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    |||||||| |||||||||| ||| ||| ||||| |||||||||||||||||| |||| |||||||||||| |||| |||||||    
T  22233018 gtagttgatactctctttactattaatgttatttagtctttattcagaattacttgtgttcattgctttttatataattgttt 22232936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 267 - 349
Target Start/End: Original strand, 22253721 - 22253803
Alignment:
Q  267 gtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    |||||||| |||||||||| ||| ||| ||||| |||||||||||||||||| |||| |||||||||||| |||| |||||||    
T  22253721 gtagttgatactctctttactattaatgttatttagtctttattcagaattacttgtgttcattgctttttatataattgttt 22253803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 301
Target Start/End: Complemental strand, 23467608 - 23467442
Alignment:
Q  142 aattgaagagtgaagccggcaacgatggaactctattggtttatattttctctactatgtt-gtttatttctttaatcatgtctagttaatttcctttga 240  Q
    |||||| |||| ||| ||||||||| | | ||||||  |||||| ||||   ||||||||| ||||||||||||||| |||||||| ||| |||||||||    
T  23467608 aattgatgagtaaagtcggcaacgacgaagctctatcagtttatttttt---tactatgttagtttatttctttaattatgtctagctaa-ttcctttga 23467513  T
Q  241 ttaagccaagatgaatc----------tatgaattagtagttgaaactctctttattatcaattttattca 301  Q
    || ||||| ||||||||          ||||||| |||||||||||||||||||||||||||| |||||||    
T  23467512 ttgagccatgatgaatctattgtaatatatgaatcagtagttgaaactctctttattatcaatattattca 23467442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 286 - 353
Target Start/End: Complemental strand, 22083813 - 22083746
Alignment:
Q  286 ttatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||| | ||| ||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  22083813 ttatcaatataatttagtctttattcagaattatttatgttcattgctttttatatgattgtttgcat 22083746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 154 - 349
Target Start/End: Original strand, 8397464 - 8397654
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcct--ttgattaagccaaga 251  Q
    ||||||||||||| |||||||||  |||||||  ||||| || ||||||||||||| |||| ||||||||||| |||||||||  ||||||||| || ||    
T  8397464 aagccggcaacgacggaactctac-ggtttat--tttctttattatgttgtttattcctttgatcatgtctagctaatttccttgttgattaagtcatga 8397560  T
Q  252 tgaatctatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    |||| ||||    || ||  ||||  ||  |  ||||| ||| |||||||||||||||||||||||| |||| ||||||| |||||| || |||||||    
T  8397561 tgaacctat--tgtaatatatgaa--tcagtaaattattaatgttattcagtctttattcagaattacttgtgttcattgtttttcagataattgttt 8397654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 154 - 235
Target Start/End: Original strand, 26557111 - 26557191
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcc 235  Q
    ||||||||||||| ||||||||||  |||||| |||| | || |||||||||||||||||| ||||||||||| ||||||||    
T  26557111 aagccggcaacgacggaactctatcagtttatttttttt-tattatgttgtttatttcttttatcatgtctagctaatttcc 26557191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 3541524 - 3541475
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||    
T  3541524 agtcttcattcagaattatttgtgttcattgcttttcgtatgattgtttg 3541475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 8276614 - 8276682
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtct 224  Q
    ||||||||||||| ||||||||||  ||||||  ||||| || |||||||||||||||||| |||||||||    
T  8276614 aagccggcaacgacggaactctatcagtttat--tttctttattatgttgtttatttcttttatcatgtct 8276682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 710415 - 710338
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  ||| |||||||||||||||||||||| | |||| || ||||||||    
T  710415 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgcttt 710338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 316
Target Start/End: Complemental strand, 23599160 - 23599102
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaat 316  Q
    ||||| ||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||    
T  23599160 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaat 23599102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 255
Target Start/End: Complemental strand, 22233134 - 22233044
Alignment:
Q  164 cgatggaactctattggtttatattttctctactatgttgtttatttc-tttaatcatgtctagttaatttcctttgattaagccaagatgaa 255  Q
    ||||| |||||||| ||||||| |||| | |  |||||||||| |||  ||||||||||||||| ||||| ||||||||| ||||| ||||||    
T  22233134 cgatgaaactctatcggtttattttttttat--tatgttgttttttttatttaatcatgtctagctaattccctttgattgagccatgatgaa 22233044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 38431155 - 38431204
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  38431155 agtctttattcagaattatttgtgcttactgcttttcttatgattgtttg 38431204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 301 - 349
Target Start/End: Complemental strand, 12803620 - 12803572
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgttt 349  Q
    |||||||||||||||||||||||  | | |||||||| |||||||||||    
T  12803620 agtctttattcagaattatttgtgcttaatgcttttcttatgattgttt 12803572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 268 - 320
Target Start/End: Complemental strand, 42606121 - 42606069
Alignment:
Q  268 tagttgaaactctctttattatcaattttattcagtctttattcagaattatt 320  Q
    ||||||| |||||||||||| | ||| | ||||| ||||||||||||||||||    
T  42606121 tagttgatactctctttattgttaatgtaattcaatctttattcagaattatt 42606069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 338
Target Start/End: Original strand, 37641472 - 37641666
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctt--tgattaagccaaga 251  Q
    |||||||||||||  ||||||||| |||||||  ||||| || |||||||||||||  ||| ||||||||||| ||||||||||  ||||||||||| ||    
T  37641472 aagccggcaacgacagaactctatcggtttat--tttctttattatgttgtttattcgtttgatcatgtctagctaatttccttgttgattaagccatga 37641569  T
Q  252 tgaatctat----------gaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttca 338  Q
    | || ||||          |||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||    
T  37641570 taaacctattgtaatatatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttca 37641666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 258 - 347
Target Start/End: Original strand, 28918093 - 28918182
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgt 347  Q
    ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  28918093 tatgaatcagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgcttttcatataattgt 28918182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 16839331 - 16839243
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  16839331 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 16839243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 258 - 346
Target Start/End: Complemental strand, 16849261 - 16849173
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattg 346  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  16849261 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttcatataattg 16849173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 1950952 - 1950865
Alignment:
Q  154 aagccggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||||||| ||||||||||||||||||  ||||| |||||||||||||| |||||| || |||||||| ||||||||||||||||    
T  1950952 aagccggcaacgacggaactctattggtttat--tttctttactatgttgtttaattctttgattatgtctagctaatttcctttgatta 1950865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 17903185 - 17903108
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||||||||||||||| |||||||| ||||| ||| |||||||||||||||||||||||| |||| |||||||||||    
T  17903185 tatgaattagtagttgatactctcttaattattaatgttattcagtctttattcagaattacttgtgttcattgcttt 17903108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 20964177 - 20964254
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| |||||||||||    
T  20964177 tatgatttagtagttgatactctcttatttaataatgttattcagtctttattcagaattatttgtgttcattgcttt 20964254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 335
Target Start/End: Original strand, 49715985 - 49716168
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcct---ttgattaagccaagatgaatc 257  Q
    |||||| |||||||||| |||||||  ||||| ||||||||||||||||| ||| ||||||||||| |||  || |   |||||| ||||| |||||| |    
T  49715985 caacgacggaactctatcggtttat--tttctttactatgttgtttatttatttgatcatgtctagctaaactcttagtttgattgagccatgatgaacc 49716082  T
Q  258 t---------atgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    |         |||||||||||||||| | |||||| ||||  |||  ||||||||||||||||||||||| |||| |||||||||||    
T  49716083 tttgtaatatatgaattagtagttgatattctctt-attaataatgctattcagtctttattcagaattacttgtgttcattgcttt 49716168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 161 - 335
Target Start/End: Original strand, 49719468 - 49719651
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcct---ttgattaagccaagatgaatc 257  Q
    |||||| |||||||||| |||||||  ||||| ||||||||||||||||| ||| ||||||||||| |||  || |   |||||| ||||| |||||| |    
T  49719468 caacgacggaactctatcggtttat--tttctttactatgttgtttatttatttgatcatgtctagctaaactcttagtttgattgagccatgatgaacc 49719565  T
Q  258 t---------atgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    |         |||||||||||||||| | |||||| ||||  |||  ||||||||||||||||||||||| |||| |||||||||||    
T  49719566 tttgtaatatatgaattagtagttgatattctctt-attaataatgctattcagtctttattcagaattacttgtgttcattgcttt 49719651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 335
Target Start/End: Original strand, 20981080 - 20981157
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||| ||||  |||  ||| ||||||||||| ||||||||||||||||| |||||||||||    
T  20981080 tatgatttagtagttgatactatcttatttaataatgttattcagtctatattcagaattatttgtgttcattgcttt 20981157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 23441640 - 23441591
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  23441640 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 23441591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 24200641 - 24200564
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  ||| |||||||||||||||||| ||| | |||| || ||||||||    
T  24200641 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcaaaatcacttgtgtttattgcttt 24200564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 33898088 - 33898137
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  33898088 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 33898137  T

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Target: scaffold0360 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 158 - 335
Target Start/End: Original strand, 2092 - 2261
Alignment:
Q  158 cggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatc 257  Q
    ||||||||| |||||||||| |||||||  ||||| || |||||||||| |||||||| | |||||||| ||||| ||||||||| ||||| ||| |||     
T  2092 cggcaacgacggaactctatcggtttat--tttctttattatgttgtttgtttctttattgatgtctagctaattccctttgattgagccatgattaata 2189  T
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    |||       ||||||| ||| |||||||||  ||| |||||||||||||||||||||||| |||| |||||||||||    
T  2190 tata------tagttgatactttctttattaataatgttattcagtctttattcagaattagttgtgttcattgcttt 2261  T

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Target: scaffold0360; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 335
Target Start/End: Original strand, 5922 - 6087
Alignment:
Q  158 cggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgattaagccaagatgaatc 257  Q
    ||||||||| |||||||||| ||||||| ||||   |||||||||   | |||||||| |||||| ||| ||||| ||||||||| ||||| ||| |||     
T  5922 cggcaacgacggaactctatcggtttatttttt---tactatgtt---tgtttctttattcatgtttagctaattccctttgattgagccatgattaata 6015  T
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    |||       ||||||| ||| |||||||||  ||| |||||||||||||||||||||||| |||| || ||||||||    
T  6016 tata------tagttgatactttctttattaataatgttattcagtctttattcagaattacttgtgtttattgcttt 6087  T

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Target: scaffold0062 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 336
Target Start/End: Complemental strand, 53387 - 53202
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcct---ttgattaagccaagatgaatc 257  Q
    |||||| | |||||||| |||||||  ||||| ||||||||||||||||| ||| ||||||||||||||| ||| |   || ||| ||||| |||||| |    
T  53387 caacgacgaaactctatcggtttat--tttctttactatgttgtttatttatttgatcatgtctagttaaattcttagtttcattgagccatgatgaacc 53290  T
Q  258 t---------atgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgctttt 336  Q
    |         ||||||||| |||||| |||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||| ||||    
T  53289 tttgtaatatatgaattagaagttgatactctctttattattaatgttattcagtctttatttagaattatttgtgttcattgttttt 53202  T

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Target: scaffold0062; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 336
Target Start/End: Complemental strand, 68286 - 68101
Alignment:
Q  161 caacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaa---tttcctttgattaagccaagatg---- 253  Q
    |||||| | |||||||| |||||||  ||||| ||||||||||||||||| ||| |||||||||||||||    ||  ||| ||| ||||| ||||        
T  68286 caacgacgaaactctatcggtttat--tttctttactatgttgtttatttatttgatcatgtctagttaaattattagtttcattgagccatgatgaacc 68189  T
Q  254 -----aatctatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgctttt 336  Q
         ||| ||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |||| ||||||| ||||    
T  68188 tttgtaatatatgaattagtagttgatactctctttattattaatgttattcagtctttattcagaattacttgtgttcattgttttt 68101  T

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Target: scaffold0067 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 258 - 338
Target Start/End: Original strand, 27082 - 27162
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttttca 338  Q
    ||||||||||||||||| ||||||||  |||  ||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  27082 tatgaattagtagttgatactctcttatttaataatattattcagtctttattcagaattatttgtgttcattgcttttca 27162  T

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Target: scaffold0134 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 6985 - 7052
Alignment:
Q  286 ttatcaattttattcagtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    |||||||| | ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||    
T  6985 ttatcaatataattcagtctttattcagaattatttatgttcattgctttttatatgattgtttgcat 7052  T

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Target: scaffold0381 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 5893 - 5810
Alignment:
Q  158 cggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||| |||||||||| | |||||  ||||| ||||||||||||||||  ||||||||||||||| ||||||||||||||||    
T  5893 cggcaacgacggaactctatcgatttat--tttctttactatgttgtttattattttaatcatgtctagctaatttcctttgatta 5810  T

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Target: scaffold0035 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 62145 - 62228
Alignment:
Q  158 cggcaacgatggaactctattggtttatattttctctactatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    ||||||||| |||||||||| || ||||  ||||| ||| ||||||||||||  ||||||||||||||| ||||||||||||||||    
T  62145 cggcaacgacggaactctatcgggttat--tttctttaccatgttgtttattattttaatcatgtctagctaatttcctttgatta 62228  T

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Target: scaffold0401 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0401
Description:

Target: scaffold0401; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 4021 - 4073
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||| ||||||| ||||| |||||||| ||||||    
T  4021 agtctttattcagaattatttgtgttcattggttttcgtatgattggttgcat 4073  T

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Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000009; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 52881 - 52933
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||| ||||  ||||||| |||||||||||||||    
T  52881 agtctttattcagaattatttgtgttcaaagcttttcgtatgattgtttgcat 52933  T

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Target: scaffold0083; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 29084 - 29136
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||| ||||  | |||||||||||||| ||||||    
T  29084 agtctttattcagaattatttgtgttcaaagattttcatatgattgattgcat 29136  T

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Target: scaffold0043 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 301 - 353
Target Start/End: Original strand, 13354 - 13406
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||| ||||||||||||  ||| |||||||||||    
T  13354 agtctttattcagaattatttgtgttcattgctttttgtataattgtttgcat 13406  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 316 - 353
Target Start/End: Original strand, 227125 - 227162
Alignment:
Q  316 ttatttgtattcattgcttttcatatgattgtttgcat 353  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  227125 ttatttgtattcattgcttttcatatgattggttgcat 227162  T

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Target: scaffold0012 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 27277 - 27200
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  ||| |||||||||||||||||||||| | |||| || ||||||||    
T  27277 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgcttt 27200  T

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Target: scaffold0012; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 31463 - 31386
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  ||| |||||||||||||||||||||| | |||| || ||||||||    
T  31463 tatgatttagtagttgatactctcttatttaataatattattcagtctttattcagaatcacttgtgtttattgcttt 31386  T

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Target: scaffold0080 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 243
Target Start/End: Original strand, 26854 - 26900
Alignment:
Q  197 tatgttgtttatttctttaatcatgtctagttaatttcctttgatta 243  Q
    |||||||||||| ||||| ||||||||||| ||||||| ||||||||    
T  26854 tatgttgtttatctctttgatcatgtctaggtaatttcatttgatta 26900  T

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Target: scaffold0273 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 301 - 350
Target Start/End: Complemental strand, 20041 - 19992
Alignment:
Q  301 agtctttattcagaattatttgtattcattgcttttcatatgattgtttg 350  Q
    |||||||||||||||||||||||  | | |||||||| ||||||||||||    
T  20041 agtctttattcagaattatttgtgcttaatgcttttcttatgattgtttg 19992  T

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Target: scaffold0175 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 29058 - 28981
Alignment:
Q  258 tatgaattagtagttgaaactctctttattatcaattttattcagtctttattcagaattatttgtattcattgcttt 335  Q
    ||||| ||||||||||| ||||||||  |||  |||  ||||||||||||||||||||| | |||| || ||||||||    
T  29058 tatgatttagtagttgatactctcttatttaataatagtattcagtctttattcagaatcacttgtgtttattgcttt 28981  T

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