View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17854_low_10 (Length: 267)

Name: NF17854_low_10
Description: NF17854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17854_low_10
NF17854_low_10
[»] chr1 (2 HSPs)
chr1 (14-248)||(51875481-51875713)
chr1 (68-140)||(51869152-51869224)
[»] chr5 (17 HSPs)
chr5 (63-178)||(27174331-27174446)
chr5 (63-178)||(42782270-42782385)
chr5 (63-178)||(41227012-41227127)
chr5 (63-178)||(32642018-32642133)
chr5 (100-178)||(31788624-31788702)
chr5 (100-178)||(37512004-37512082)
chr5 (100-178)||(40544234-40544312)
chr5 (100-178)||(40548367-40548445)
chr5 (94-176)||(42410969-42411051)
chr5 (84-161)||(30650704-30650781)
chr5 (101-178)||(42405815-42405892)
chr5 (91-178)||(42777097-42777184)
chr5 (101-168)||(42797141-42797208)
chr5 (85-155)||(42261495-42261565)
chr5 (66-178)||(24654582-24654694)
chr5 (85-161)||(31777051-31777126)
chr5 (100-176)||(32031966-32032042)
[»] chr6 (19 HSPs)
chr6 (66-178)||(32745722-32745834)
chr6 (66-178)||(34259119-34259231)
chr6 (63-178)||(21379303-21379418)
chr6 (66-178)||(29144370-29144482)
chr6 (66-178)||(34279378-34279490)
chr6 (92-178)||(32973522-32973608)
chr6 (66-155)||(287461-287550)
chr6 (63-168)||(21375211-21375316)
chr6 (101-178)||(34264519-34264596)
chr6 (66-146)||(29136412-29136492)
chr6 (85-178)||(13339146-13339239)
chr6 (102-146)||(2742756-2742800)
chr6 (66-178)||(29123230-29123342)
chr6 (66-178)||(29152943-29153055)
chr6 (66-161)||(23216835-23216930)
chr6 (122-178)||(34281049-34281105)
chr6 (66-178)||(29011978-29012090)
chr6 (94-178)||(29130403-29130487)
chr6 (94-178)||(29149759-29149843)
[»] scaffold0054 (2 HSPs)
scaffold0054 (85-176)||(34345-34436)
scaffold0054 (85-176)||(40702-40793)
[»] chr4 (5 HSPs)
chr4 (92-178)||(9603448-9603534)
chr4 (94-178)||(54295949-54296033)
chr4 (100-178)||(9568308-9568386)
chr4 (100-172)||(9573461-9573533)
chr4 (85-125)||(11000040-11000080)
[»] chr7 (1 HSPs)
chr7 (66-167)||(42445421-42445522)
[»] chr3 (1 HSPs)
chr3 (85-161)||(9704356-9704432)
[»] chr2 (7 HSPs)
chr2 (85-178)||(44919371-44919464)
chr2 (70-166)||(7436124-7436220)
chr2 (99-161)||(7524979-7525041)
chr2 (102-148)||(16920100-16920146)
chr2 (85-167)||(44913375-44913457)
chr2 (67-140)||(7429857-7429930)
chr2 (85-161)||(7519705-7519781)
[»] scaffold0129 (2 HSPs)
scaffold0129 (66-146)||(9596-9676)
scaffold0129 (66-161)||(34378-34473)
[»] scaffold0831 (1 HSPs)
scaffold0831 (70-152)||(2126-2208)
[»] scaffold0134 (1 HSPs)
scaffold0134 (68-161)||(17119-17212)


Alignment Details
Target: chr1 (Bit Score: 212; Significance: 1e-116; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 14 - 248
Target Start/End: Original strand, 51875481 - 51875713
Alignment:
Q  14 agagatgcattgtgataacaagaactgttgttagatagaaaatagtcacgaccatgttcatgaaacgaggattttcgaataagagtgaccatgatttaca 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51875481 agagatgcattgtgataacaagaactgttgttagatagaaaatagtcacgaccatgttcatgaaacgaggattttcgaataagagtgaccatgatttaca 51875580  T
Q  114 tacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcatatcatgtatcttttcatttgtggtagtcgcatatt 213  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||    
T  51875581 tacacatccaaatcgctttaaagattgaagaggtagttttgatagaatcgagaagacaatatc--atcgtgtatcttttcatttgtggtagtcgcatatt 51875678  T
Q  214 tcttctccatctccgatgccctatgaggaagagac 248  Q
    |||||||||||||||||||||||||||||||||||    
T  51875679 tcttctccatctccgatgccctatgaggaagagac 51875713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 51869224 - 51869152
Alignment:
Q  68 tgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagattt 140  Q
    ||||||||||| |||| | ||| |||||||| ||||||| |||  || ||||||||||||| || ||||||||    
T  51869224 tgttcatgaaatgagggtcttcaaataagagagaccatggtttgtatgcacatccaaatcgtttcaaagattt 51869152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 27174331 - 27174446
Alignment:
Q  63 gaccatgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatc 162  Q
    |||||||||||||||| |||||||||| ||||| ||||| |||||||| | ||| |||||||||||||| |||||||| ||||||| |||||||||| |     
T  27174331 gaccatgttcatgaaaagaggattttcaaataaaagtgatcatgatttgcgtacgcatccaaatcgcttcaaagatttcagaggtaattttgatagattt 27174430  T
Q  163 gagaaggcaatatcat 178  Q
    ||||||| ||||||||    
T  27174431 gagaaggtaatatcat 27174446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 42782385 - 42782270
Alignment:
Q  63 gaccatgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatc 162  Q
    ||||||||||||||||  ||||||||| ||||  |||||||||||||||| ||| |||||||||||||| ||||||||||  |||| ||||||||||||     
T  42782385 gaccatgttcatgaaaaaaggattttcaaatagaagtgaccatgatttacgtacgcatccaaatcgcttcaaagatttaatcggtaattttgatagaatt 42782286  T
Q  163 gagaaggcaatatcat 178  Q
    ||||||| ||||||||    
T  42782285 gagaaggtaatatcat 42782270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 41227127 - 41227012
Alignment:
Q  63 gaccatgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatc 162  Q
    ||||||||||||||||  ||||||||| ||||  || ||||||||||||||||  |||| ||||||||||||||||||||  |||| ||||||||||||     
T  41227127 gaccatgttcatgaaaaaaggattttcaaatagaagggaccatgatttacatatgcatcgaaatcgctttaaagatttaatcggtaattttgatagaatt 41227028  T
Q  163 gagaaggcaatatcat 178  Q
    ||||||| ||||||||    
T  41227027 gagaaggtaatatcat 41227012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 32642133 - 32642018
Alignment:
Q  63 gaccatgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatc 162  Q
    |||||||||||||||| |||||||||| || || | |||||||||||||| |||| || ||||| |||  |||||||||||||||| ||||||||||||     
T  32642133 gaccatgttcatgaaaagaggattttcaaacaaaaatgaccatgatttacgtacatattcaaattgctacaaagatttaagaggtaattttgatagaatt 32642034  T
Q  163 gagaaggcaatatcat 178  Q
    || |||| ||||||||    
T  32642033 gaaaaggtaatatcat 32642018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 31788702 - 31788624
Alignment:
Q  100 gaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||||||||| | ||| ||| ||||||| || ||||||||||  || |||||||||||||| ||||||||||||||||    
T  31788702 gaccatgatttgcgtacgcattcaaatcgtttcaaagatttaatggggagttttgatagaatagagaaggcaatatcat 31788624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 37512082 - 37512004
Alignment:
Q  100 gaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||||||||| |||||| || ||||||| || |||||||| ||||| |||||||||| ||| ||||||||||| ||||    
T  37512082 gaccatgatttgcatacatattcaaatcgtttcaaagatttgagaggcagttttgataaaatggagaaggcaatgtcat 37512004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 40544312 - 40544234
Alignment:
Q  100 gaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||||||||| | ||| ||| ||||||| || |||||||||| ||| |||||||||||||| |||||||||| |||||    
T  40544312 gaccatgattttcttacgcattcaaatcgtttcaaagatttaatagggagttttgatagaatagagaaggcaacatcat 40544234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 40548445 - 40548367
Alignment:
Q  100 gaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||||||||||| ||  ||| |||||||||| |||||||||| ||| |||||| ||||||| || |||||||||||||    
T  40548445 gaccatgatttacttatgcattcaaatcgcttcaaagatttaacaggaagtttttatagaatggaaaaggcaatatcat 40548367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 94 - 176
Target Start/End: Complemental strand, 42411051 - 42410969
Alignment:
Q  94 aagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatc 176  Q
    ||||| ||||||||||||| ||||||| |||||||  |||||||||||| ||||||||| || ||||| |||||  |||||||    
T  42411051 aagagggaccatgatttacttacacattcaaatcgtcttaaagatttaacaggtagtttggagagaatagagaaaacaatatc 42410969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 30650781 - 30650704
Alignment:
Q  84 attttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaat 161  Q
    |||||| |||||||| ||||||| |||   |||||||||||| || ||||||||||| | ||| ||||||||||||||    
T  30650781 attttcaaataagagagaccatgttttctttacacatccaaaacgttttaaagattttaaaggaagttttgatagaat 30650704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 42405892 - 42405815
Alignment:
Q  101 accatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    |||||||||||| ||| | | ||||||||||||||||||||| ||| ||||| || | ||| || |||||||||||||    
T  42405892 accatgatttacgtacgctttcaaatcgctttaaagatttaacaggcagtttcgacataatagataaggcaatatcat 42405815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 178
Target Start/End: Complemental strand, 42777184 - 42777097
Alignment:
Q  91 aataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    |||||||| ||||||||||| || |||||| ||||||| ||    ||||||| ||||| |||||| ||||| ||||| ||||||||||    
T  42777184 aataagagagaccatgatttgcacacacattcaaatcgtttggttgatttaataggtaattttgagagaatagagaaagcaatatcat 42777097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 42797141 - 42797208
Alignment:
Q  101 accatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaag 168  Q
    |||||||||||  |||| ||| ||||||||| |||||||||| ||||| |||||| ||||| ||||||    
T  42797141 accatgatttaagtacatatcaaaatcgcttcaaagatttaataggtaattttgagagaatagagaag 42797208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 155
Target Start/End: Complemental strand, 42261565 - 42261495
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttga 155  Q
    |||||||||||||| ||||||||||| |||||||||  ||| ||||| || ||||| | ||| ||||||||    
T  42261565 ttttcgaataagagagaccatgatttgcatacacatataaaccgcttcaatgattttaaaggcagttttga 42261495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 24654694 - 24654582
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgag 165  Q
    |||| ||||||||  ||| || || ||||| || ||||||||||||| |||||| ||||| ||||| || ||||| | ||||| ||| || ||||| |||    
T  24654694 catggtcatgaaataagggttatctaataaaagggaccatgatttacgtacacaaccaaaacgcttgaatgattttataggtaatttggaaagaatagag 24654595  T
Q  166 aaggcaatatcat 178  Q
    |||| || |||||    
T  24654594 aaggaaagatcat 24654582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 31777126 - 31777051
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaat 161  Q
    ||||| |||||||| ||||||| |||   |||||||||||| |||||||||||||| |  || ||||||||||||||    
T  31777126 ttttcaaataagagagaccatgttttctttacacatccaaa-cgctttaaagattttaatggaagttttgatagaat 31777051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 32032042 - 32031966
Alignment:
Q  100 gaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatc 176  Q
    |||||| |||| | ||| ||| ||||||| || ||||||||||  || |||||| ||||||| ||||||||||||||    
T  32032042 gaccataatttgcgtacgcattcaaatcgtttcaaagatttaatggggagttttaatagaatagagaaggcaatatc 32031966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 7e-24; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 32745722 - 32745834
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgag 165  Q
    ||||||||||||| ||| ||||||  ||||||| ||||||||||| |  || ||| ||||||| || |||||||||||||||||||||||||| || |||    
T  32745722 catgttcatgaaatgagtattttcagataagagagaccatgatttgcgaacgcattcaaatcgtttaaaagatttaagaggtagttttgataggatggag 32745821  T
Q  166 aaggcaatatcat 178  Q
    |||||||||||||    
T  32745822 aaggcaatatcat 32745834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 34259119 - 34259231
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgag 165  Q
    |||||||||||||||||  | ||  |||||||| |||||||||||||  || |||||||||||||||||||| ||||||||||||||   |||||| |||    
T  34259119 catgttcatgaaacgagtgtcttgtaataagagagaccatgatttacgaacgcatccaaatcgctttaaagacttaagaggtagtttgtgtagaatagag 34259218  T
Q  166 aaggcaatatcat 178  Q
    |||||||||||||    
T  34259219 aaggcaatatcat 34259231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 63 - 178
Target Start/End: Original strand, 21379303 - 21379418
Alignment:
Q  63 gaccatgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatc 162  Q
    ||||||||||||||||  ||  ||||| |||||||| |||||||||||||  || |||||||||||||| ||||||||||||||||  || ||||||||     
T  21379303 gaccatgttcatgaaataagtgttttcaaataagagagaccatgatttacggacgcatccaaatcgcttcaaagatttaagaggtaacttcgatagaata 21379402  T
Q  163 gagaaggcaatatcat 178  Q
    |||||| | |||||||    
T  21379403 gagaagactatatcat 21379418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 29144482 - 29144370
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgag 165  Q
    ||||||||||||| ||| || ||| ||||||||  |||| |||||||  || |||||||||||||| |||||||||||||| | ||| |||||||| ||     
T  29144482 catgttcatgaaatgagtatcttcaaataagagataccaagatttacgaacgcatccaaatcgcttcaaagatttaagaggcaatttcgatagaatggat 29144383  T
Q  166 aaggcaatatcat 178  Q
    |||||||||||||    
T  29144382 aaggcaatatcat 29144370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 34279378 - 34279490
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgag 165  Q
    ||||||||||||  || |||||||  |||| ||  ||||||||||||| |||||| |||| | ||| |||||||||||||||| |||||| ||||| |||    
T  34279378 catgttcatgaagtgatgattttcagataaaagataccatgatttacaaacacattcaaaactcttgaaagatttaagaggtaattttgaaagaatggag 34279477  T
Q  166 aaggcaatatcat 178  Q
    |||||||||||||    
T  34279478 aaggcaatatcat 34279490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 32973522 - 32973608
Alignment:
Q  92 ataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||||| |||||||||||||| |||||| |||| ||||| |||||||||||||| | ||||||||||||  |||||| ||| ||||    
T  32973522 ataagagagaccatgatttacaaacacattcaaaacgcttgaaagatttaagaggcaattttgatagaatatagaaggaaatttcat 32973608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 155
Target Start/End: Original strand, 287461 - 287550
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttga 155  Q
    |||| |||||||  || ||||||| || ||||| | ||||||||||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  287461 catggtcatgaagtgaagattttcaaacaagagagtccatgatttacatacacatccaaatcgttttaaagattttagaggcaattttga 287550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 21375211 - 21375316
Alignment:
Q  63 gaccatgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatc 162  Q
    ||||||||||||||||  |   ||||| |||||||| |||||||||||| | || |||||||||| ||| ||||||||||||| || ||| ||||||||     
T  21375211 gaccatgttcatgaaataaatgttttcaaataagagggaccatgatttatagacgcatccaaatcacttcaaagatttaagagataatttcgatagaata 21375310  T
Q  163 gagaag 168  Q
    ||||||    
T  21375311 gagaag 21375316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 34264519 - 34264596
Alignment:
Q  101 accatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||||||||||  || |||||||||||||||||||| ||||||||||||||   |||||| ||||||||| ||||||    
T  34264519 accatgatttacgaacgcatccaaatcgctttaaagacttaagaggtagtttgtgtagaatagagaaggcagtatcat 34264596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 29136492 - 29136412
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagagg 146  Q
    ||||||||||||||||| |||||| |||||||| ||||||||||| || || ||| |||  ||||| ||||||||||||||    
T  29136492 catgttcatgaaacgagtattttcaaataagagagaccatgatttgcaaacgcattcaatacgcttgaaagatttaagagg 29136412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 178
Target Start/End: Complemental strand, 13339239 - 13339146
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||| |||||||||||||||||||| |  || |||| |||||| |  |||||||||||||| ||||| |||||||||| ||||| ||| ||||    
T  13339239 ttttcaaataagagtgaccatgatttgcgaacgcatcgaaatcggtacaaagatttaagaggaagtttggatagaatcgtgaaggaaatgtcat 13339146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 2742756 - 2742800
Alignment:
Q  102 ccatgatttacatacacatccaaatcgctttaaagatttaagagg 146  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||    
T  2742756 ccatgatttacatacgcatccaaatcgctttaaagattttagagg 2742800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 29123342 - 29123230
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgag 165  Q
    ||||||||||||| ||| || |||  | ||||| ||||||||||| |  ||  || ||| ||| || |||||||||||||| | |||||||||||| |||    
T  29123342 catgttcatgaaatgagtatcttcagacaagagagaccatgatttgcgaacggattcaactcgtttaaaagatttaagaggcaattttgatagaatggag 29123243  T
Q  166 aaggcaatatcat 178  Q
    |||||||||||||    
T  29123242 aaggcaatatcat 29123230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 66 - 178
Target Start/End: Original strand, 29152943 - 29153055
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgag 165  Q
    ||||||||||||  || | |||||  ||| ||| ||||||||||| |  |||||| ||||  |||| |||||||||||||| | |||||| ||||| |||    
T  29152943 catgttcatgaagtgatgtttttcagataggagggaccatgatttgcgaacacattcaaaatgcttgaaagatttaagaggcaattttgagagaatggag 29153042  T
Q  166 aaggcaatatcat 178  Q
    |||||||||||||    
T  29153043 aaggcaatatcat 29153055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 23216835 - 23216930
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaat 161  Q
    ||||||||||||| ||| ||| || | |||||| ||||||||||| |  |||||| |||||| ||| ||||||||||||||||  || ||||||||    
T  23216835 catgttcatgaaatgagaattatcaattaagagagaccatgatttgcgaacacattcaaatctcttcaaagatttaagaggtaacttcgatagaat 23216930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 178
Target Start/End: Complemental strand, 34281105 - 34281049
Alignment:
Q  122 caaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    |||| ||||| |||||||||||||| | |||||| ||||| ||||||||||||||||    
T  34281105 caaaacgcttgaaagatttaagaggcaattttgagagaatagagaaggcaatatcat 34281049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 66 - 178
Target Start/End: Complemental strand, 29012090 - 29011978
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgag 165  Q
    ||||||||||||| ||| |||||| || ||||| ||||||||||| |  ||| || | ||||| || || ||||  | ||| |||||||||||||| |||    
T  29012090 catgttcatgaaatgagtattttcaaacaagagagaccatgatttgcgaacagattcgaatcgtttcaacgattgcaaaggaagttttgatagaatagag 29011991  T
Q  166 aaggcaatatcat 178  Q
    |||  ||||||||    
T  29011990 aagtgaatatcat 29011978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 178
Target Start/End: Complemental strand, 29130487 - 29130403
Alignment:
Q  94 aagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||| |||||||||||||  ||  || |||||||||| |||||||||||||| |  ||||| ||||| ||||||  ||||||||    
T  29130487 aagagagaccatgatttacgaacggattcaaatcgcttgaaagatttaagaggcaactttgagagaatggagaagtgaatatcat 29130403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 29149759 - 29149843
Alignment:
Q  94 aagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||| ||||||||||| |  || ||| ||||||  || |||||||||||||| | |||||| ||||| |||||||| |||||||    
T  29149759 aagagagaccatgatttgcgaacgcattcaaatcagttaaaagatttaagaggcaattttgagagaatggagaaggctatatcat 29149843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 34345 - 34436
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatc 176  Q
    ||||| ||||||||||||||||||||||  || |||| |||||| || |||||||||||||| ||||| |||||||| | ||||| ||||||    
T  34345 ttttcaaataagagtgaccatgatttacgaacgcatcgaaatcggttcaaagatttaagagggagtttggatagaattgtgaaggaaatatc 34436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 176
Target Start/End: Original strand, 40702 - 40793
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatc 176  Q
    ||||| ||||||||||||||||||||||  || |||| |||||| || ||||||| |||||| ||||| |||||||||| ||||| ||||||    
T  40702 ttttcaaataagagtgaccatgatttacgaacgcatcgaaatcggttcaaagattgaagagggagtttggatagaatcgtgaaggaaatatc 40793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 178
Target Start/End: Original strand, 9603448 - 9603534
Alignment:
Q  92 ataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||||| ||||||| |||||| |  ||| |||||||||| |||||||||||||| | ||| |||||||| ||||||||||||||||    
T  9603448 ataagagagaccatggtttacaaaagcattcaaatcgcttaaaagatttaagaggcaatttggatagaatggagaaggcaatatcat 9603534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 54295949 - 54296033
Alignment:
Q  94 aagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||| ||||||||| |||  || ||| ||||||| || |||||||||||||| |||||||||| ||| ||||||| ||||||||    
T  54295949 aagagagaccatgatctacgaacgcattcaaatcgtttaaaagatttaagaggcagttttgataaaatggagaaggaaatatcat 54296033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 9568386 - 9568308
Alignment:
Q  100 gaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    |||||||||||||  || ||| |||||||||| | |||||||| ||| | ||| |||||||| ||||||||||||||||    
T  9568386 gaccatgatttacgaacgcattcaaatcgcttaatagatttaaaaggcaatttggatagaatagagaaggcaatatcat 9568308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 9573533 - 9573461
Alignment:
Q  100 gaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaa 172  Q
    ||||||||||| |  |||||| |||||||||| |||||||||| ||| | ||| |||||||| ||||||||||    
T  9573533 gaccatgatttgcgaacacattcaaatcgcttaaaagatttaataggcaatttggatagaatggagaaggcaa 9573461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 125
Target Start/End: Complemental strand, 11000080 - 11000040
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaa 125  Q
    ||||| |||||||| |||||||||||||||||||| |||||    
T  11000080 ttttcaaataagagggaccatgatttacatacacacccaaa 11000040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 66 - 167
Target Start/End: Complemental strand, 42445522 - 42445421
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgag 165  Q
    ||||||||||||| || | |||||  ||||||| |||||  ||||||  |||||| |||||||||| |||||||||||||||| |||||||| ||| |||    
T  42445522 catgttcatgaaatgatggttttcagataagagagaccacaatttacgaacacattcaaatcgcttaaaagatttaagaggtaattttgatataatggag 42445423  T
Q  166 aa 167  Q
    ||    
T  42445422 aa 42445421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 9704432 - 9704356
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaat 161  Q
    ||||| ||||| |||| |||||||||||  ||||||| |||||| ||||||||||| ||||||| ||||||||||||    
T  9704432 ttttcaaataaaagtgtccatgatttacgaacacatctaaatcgttttaaagatttcagaggtaattttgatagaat 9704356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 178
Target Start/End: Original strand, 44919371 - 44919464
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaaggcaatatcat 178  Q
    ||||| |||||||| | ||||||||||| ||||||| ||||| |||| |||||||| | ||| |||||||| ||||| ||||| |||| |||||    
T  44919371 ttttcaaataagagagcccatgatttacgtacacattcaaatggcttaaaagattttaaaggaagttttgacagaatagagaatgcaagatcat 44919464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 70 - 166
Target Start/End: Original strand, 7436124 - 7436220
Alignment:
Q  70 ttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgaga 166  Q
    |||||||||  ||| ||||  ||||| | ||||||||||||||||  | || |||||||||| |||||||||||||| |  ||||||||||| ||||    
T  7436124 ttcatgaaataagggttttgaaataacattgaccatgatttacatgtagattcaaatcgcttcaaagatttaagaggcaaatttgatagaatggaga 7436220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 161
Target Start/End: Original strand, 7524979 - 7525041
Alignment:
Q  99 tgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaat 161  Q
    |||||||| |||| ||||| || |||||||||  |||||||||||||| | ||||||||||||    
T  7524979 tgaccatggtttagatacagattcaaatcgctgcaaagatttaagaggcaattttgatagaat 7525041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 16920146 - 16920100
Alignment:
Q  102 ccatgatttacatacacatccaaatcgctttaaagatttaagaggta 148  Q
    ||||||||||| ||| |||||||||||||| |||||||| |||||||    
T  16920146 ccatgatttacgtacgcatccaaatcgcttcaaagattttagaggta 16920100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 44913375 - 44913457
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaatcgagaa 167  Q
    ||||| |||||||  | ||||| ||||||||| ||||||||||| ||||||||||| | ||  |||||||| ||||| |||||    
T  44913375 ttttcaaataagaaagtccatggtttacatacgcatccaaatcgttttaaagattttaaagaaagttttgacagaatagagaa 44913457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 67 - 140
Target Start/End: Original strand, 7429857 - 7429930
Alignment:
Q  67 atgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagattt 140  Q
    |||||||||||| |||| | ||  |||||||  | ||||||||| ||||| |||||||||||||| ||||||||    
T  7429857 atgttcatgaaatgagggtcttgaaataagatggcccatgatttgcatacgcatccaaatcgcttcaaagattt 7429930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 7519781 - 7519705
Alignment:
Q  85 ttttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaat 161  Q
    ||||| ||||| | ||||| |||||||||| ||  | ||||| |||| |||||||| ||||| ||||||||||||||    
T  7519781 ttttcaaataacattgaccgtgatttacatgcaagttcaaatagcttcaaagattttagaggcagttttgatagaat 7519705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 9676 - 9596
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagagg 146  Q
    |||||||||||||  ||| ||||| |||||| | ||||||||||||  |||||| | |||||| || ||||||||||||||    
T  9676 catgttcatgaaattagggttttcaaataagcgagaccatgatttatgtacacaactaaatcgtttcaaagatttaagagg 9596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 66 - 161
Target Start/End: Original strand, 34378 - 34473
Alignment:
Q  66 catgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaat 161  Q
    |||||| ||||||  |||||| || |||||| | ||||||||||||| ||| || | ||| || ||| ||||||||||||| | ||||||||||||    
T  34378 catgtttatgaaattaggattctcaaataagtgagaccatgatttacgtacgcaactaaaacgttttgaagatttaagaggcaattttgatagaat 34473  T

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Target: scaffold0831 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0831
Description:

Target: scaffold0831; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 152
Target Start/End: Original strand, 2126 - 2208
Alignment:
Q  70 ttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttt 152  Q
    ||||||||| |||||| ||| ||||| || |||||||| || ||| ||||   ||||||||| | ||||||||||||||||||    
T  2126 ttcatgaaatgaggatcttcaaataaaagagaccatgacttgcatgcacaagtaaatcgcttgagagatttaagaggtagttt 2208  T

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Target: scaffold0134 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 68 - 161
Target Start/End: Original strand, 17119 - 17212
Alignment:
Q  68 tgttcatgaaacgaggattttcgaataagagtgaccatgatttacatacacatccaaatcgctttaaagatttaagaggtagttttgatagaat 161  Q
    |||||||||||  || ||| || | |||||| ||||||||||| || || ||| |||||| ||| |||||||||||||| |  |||||||||||    
T  17119 tgttcatgaaataagaattatcaattaagagagaccatgatttgcaaacgcattcaaatctcttcaaagatttaagaggcaactttgatagaat 17212  T

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