View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17855_high_10 (Length: 357)
Name: NF17855_high_10
Description: NF17855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17855_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 69 - 342
Target Start/End: Original strand, 2018468 - 2018739
Alignment:
| Q |
69 |
gaatatatagtacatattttgtacttaaatttgtttaagggtacaattaaaaggggaaaagtcaaccaaaactattctctatatatagtataaattgttg |
168 |
Q |
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| T |
2018468 |
gaatatataatacatattttgtacttaaatttgtttaagggtacaattaaaaggggaaaagtcaaccaaaactattctctatatatagtataaattgttg |
2018567 |
T |
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| Q |
169 |
tttcaagccctattttaaagaccctagtcatcttactttctctcatcaccactccaactcccttttcttcctcggtaaggttttgcactctttattatct |
268 |
Q |
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|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2018568 |
tttcaagccctattttaaagaccctagtcaccttact--ctctcatcaccactccaactcccttttcttcctcggtaaggttttgcactctttattatct |
2018665 |
T |
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| Q |
269 |
gttctttctttatgtaatgggaaaaataagcaacaaaaataatttacgttattaaattgttgtagcaatcatat |
342 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2018666 |
gttctttctttatgtaatgggaaaaataagcaacaaaaataatttacgttattaaattgttgtagcaatcatat |
2018739 |
T |
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