View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17855_low_12 (Length: 386)

Name: NF17855_low_12
Description: NF17855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17855_low_12
NF17855_low_12
[»] chr7 (62 HSPs)
chr7 (18-373)||(28077997-28078352)
chr7 (58-216)||(21172031-21172188)
chr7 (57-216)||(32758214-32758372)
chr7 (65-216)||(10693095-10693245)
chr7 (57-216)||(48735144-48735303)
chr7 (57-219)||(2541038-2541202)
chr7 (58-216)||(42798623-42798782)
chr7 (57-219)||(34626227-34626389)
chr7 (57-219)||(42805477-42805642)
chr7 (58-216)||(47077877-47078034)
chr7 (64-217)||(40463837-40463990)
chr7 (70-210)||(27629600-27629741)
chr7 (57-219)||(35334835-35334996)
chr7 (86-216)||(42391122-42391251)
chr7 (58-218)||(47716413-47716576)
chr7 (58-209)||(46354148-46354302)
chr7 (81-219)||(33871929-33872067)
chr7 (57-137)||(42495937-42496017)
chr7 (70-217)||(19426911-19427058)
chr7 (58-137)||(7193039-7193118)
chr7 (58-137)||(43557426-43557505)
chr7 (71-193)||(11617633-11617756)
chr7 (59-137)||(18326989-18327067)
chr7 (62-137)||(14732924-14732999)
chr7 (56-193)||(42476825-42476961)
chr7 (63-137)||(7794608-7794682)
chr7 (59-194)||(8148989-8149126)
chr7 (81-195)||(19265792-19265906)
chr7 (58-188)||(2662985-2663112)
chr7 (59-137)||(5180259-5180337)
chr7 (81-194)||(28362189-28362303)
chr7 (83-216)||(11741774-11741906)
chr7 (81-218)||(13805079-13805216)
chr7 (58-130)||(22699079-22699151)
chr7 (95-219)||(38262215-38262340)
chr7 (81-137)||(29907394-29907452)
chr7 (81-191)||(48123531-48123642)
chr7 (81-183)||(6736867-6736969)
chr7 (81-197)||(14099047-14099164)
chr7 (81-197)||(14409064-14409181)
chr7 (105-218)||(18512473-18512586)
chr7 (81-193)||(23419719-23419832)
chr7 (70-133)||(1424016-1424079)
chr7 (90-219)||(18747472-18747603)
chr7 (81-131)||(39123867-39123917)
chr7 (81-188)||(44123672-44123779)
chr7 (152-217)||(7879687-7879752)
chr7 (81-137)||(7644933-7644989)
chr7 (57-125)||(12473257-12473325)
chr7 (81-217)||(19266427-19266564)
chr7 (166-218)||(27889336-27889388)
chr7 (81-132)||(3469286-3469337)
chr7 (58-137)||(21447544-21447623)
chr7 (149-220)||(38604572-38604643)
chr7 (166-219)||(21566498-21566552)
chr7 (152-217)||(35787290-35787355)
chr7 (81-137)||(16341255-16341311)
chr7 (153-197)||(21139789-21139833)
chr7 (81-137)||(42101987-42102043)
chr7 (61-112)||(29140487-29140538)
chr7 (149-218)||(23065945-23066014)
chr7 (167-219)||(23231621-23231673)
[»] chr8 (47 HSPs)
chr8 (57-217)||(13160655-13160815)
chr8 (58-216)||(12670272-12670429)
chr8 (57-216)||(30454119-30454277)
chr8 (57-219)||(28817645-28817808)
chr8 (57-219)||(36720749-36720912)
chr8 (58-219)||(35261633-35261795)
chr8 (58-217)||(45071219-45071378)
chr8 (58-219)||(7136546-7136710)
chr8 (57-219)||(17823529-17823692)
chr8 (57-219)||(18164779-18164941)
chr8 (58-219)||(29521704-29521866)
chr8 (57-219)||(39461013-39461178)
chr8 (58-219)||(44530103-44530265)
chr8 (58-215)||(20869523-20869677)
chr8 (57-217)||(2626472-2626636)
chr8 (63-219)||(8897783-8897940)
chr8 (81-218)||(24365079-24365218)
chr8 (70-137)||(28407382-28407449)
chr8 (57-219)||(6760776-6760940)
chr8 (58-131)||(24245405-24245478)
chr8 (73-219)||(12625858-12626006)
chr8 (62-219)||(20284088-20284250)
chr8 (62-137)||(21070804-21070879)
chr8 (58-219)||(26954086-26954251)
chr8 (90-195)||(23000262-23000365)
chr8 (57-219)||(25250475-25250640)
chr8 (81-136)||(42083802-42083857)
chr8 (59-137)||(11748254-11748332)
chr8 (149-215)||(29877140-29877206)
chr8 (86-216)||(31457155-31457285)
chr8 (81-137)||(44781608-44781664)
chr8 (149-216)||(19729386-19729453)
chr8 (149-219)||(389691-389761)
chr8 (149-219)||(5689677-5689747)
chr8 (166-216)||(26102580-26102630)
chr8 (83-137)||(30962875-30962929)
chr8 (83-137)||(35105902-35105956)
chr8 (166-218)||(5135309-5135361)
chr8 (81-137)||(22598134-22598190)
chr8 (57-101)||(23286431-23286475)
chr8 (57-100)||(40605044-40605087)
chr8 (175-209)||(11748373-11748407)
chr8 (149-219)||(20869969-20870041)
chr8 (178-219)||(27507985-27508026)
chr8 (58-95)||(42840863-42840900)
chr8 (166-202)||(11000985-11001021)
chr8 (171-219)||(28407471-28407519)
[»] chr4 (71 HSPs)
chr4 (57-217)||(5648212-5648372)
chr4 (57-208)||(5306694-5306845)
chr4 (57-219)||(6430645-6430807)
chr4 (56-219)||(30639332-30639495)
chr4 (57-209)||(48598854-48599005)
chr4 (57-216)||(20224937-20225095)
chr4 (58-208)||(47528560-47528709)
chr4 (61-219)||(16911519-16911680)
chr4 (81-217)||(40915806-40915942)
chr4 (56-187)||(14590789-14590922)
chr4 (58-219)||(23501747-23501905)
chr4 (58-216)||(11054170-11054327)
chr4 (70-219)||(8473639-8473789)
chr4 (65-219)||(16408620-16408777)
chr4 (58-191)||(37494805-37494939)
chr4 (58-219)||(21646918-21647082)
chr4 (84-219)||(17043413-17043549)
chr4 (61-219)||(14983791-14983950)
chr4 (82-209)||(9832342-9832468)
chr4 (90-218)||(25463108-25463237)
chr4 (96-216)||(29207920-29208039)
chr4 (85-216)||(39077818-39077948)
chr4 (84-219)||(54175043-54175181)
chr4 (87-195)||(7385519-7385628)
chr4 (61-137)||(17315400-17315476)
chr4 (58-219)||(20405047-20405205)
chr4 (58-137)||(10660358-10660437)
chr4 (58-137)||(10874503-10874582)
chr4 (59-218)||(54966977-54967135)
chr4 (81-219)||(35567147-35567286)
chr4 (83-219)||(49938612-49938746)
chr4 (149-210)||(7909309-7909370)
chr4 (81-219)||(44363149-44363290)
chr4 (58-219)||(55766485-55766647)
chr4 (70-195)||(30496365-30496489)
chr4 (105-209)||(47443958-47444063)
chr4 (81-137)||(54730226-54730282)
chr4 (58-125)||(13256511-13256578)
chr4 (82-219)||(30690195-30690340)
chr4 (63-137)||(30352693-30352767)
chr4 (87-194)||(41018838-41018945)
chr4 (61-134)||(5313099-5313172)
chr4 (152-217)||(49796846-49796911)
chr4 (58-219)||(55830740-55830902)
chr4 (81-137)||(487237-487293)
chr4 (82-137)||(23580310-23580365)
chr4 (82-218)||(32478811-32478942)
chr4 (150-220)||(9987852-9987922)
chr4 (85-191)||(19027829-19027936)
chr4 (81-195)||(47441573-47441688)
chr4 (81-134)||(12257698-12257751)
chr4 (166-219)||(25629112-25629165)
chr4 (167-216)||(38786673-38786722)
chr4 (152-219)||(20908655-20908723)
chr4 (89-137)||(32629370-32629418)
chr4 (81-137)||(42164250-42164306)
chr4 (81-137)||(43035225-43035281)
chr4 (149-219)||(20639677-20639748)
chr4 (152-219)||(51865057-51865124)
chr4 (81-131)||(50856344-50856394)
chr4 (149-219)||(20225120-20225192)
chr4 (61-101)||(18969698-18969738)
chr4 (81-137)||(54640441-54640497)
chr4 (175-218)||(21489160-21489203)
chr4 (164-218)||(3580860-3580914)
chr4 (81-123)||(3580952-3580994)
chr4 (174-216)||(28494222-28494264)
chr4 (177-219)||(32484307-32484349)
chr4 (149-219)||(13256418-13256490)
chr4 (82-208)||(30581495-30581624)
chr4 (166-219)||(33836506-33836561)
[»] chr1 (68 HSPs)
chr1 (58-217)||(32632578-32632737)
chr1 (55-216)||(34725120-34725280)
chr1 (58-216)||(38478304-38478461)
chr1 (58-216)||(47214488-47214645)
chr1 (57-219)||(14617014-14617177)
chr1 (58-216)||(45812559-45812716)
chr1 (64-219)||(30395745-30395903)
chr1 (58-219)||(46247972-46248134)
chr1 (58-193)||(22930114-22930248)
chr1 (58-218)||(18944620-18944783)
chr1 (58-219)||(46991781-46991943)
chr1 (62-216)||(19414420-19414573)
chr1 (64-216)||(12126859-12127010)
chr1 (73-219)||(23768339-23768486)
chr1 (58-219)||(20004109-20004273)
chr1 (57-210)||(41319834-41319988)
chr1 (58-219)||(10668197-10668366)
chr1 (81-218)||(18724565-18724703)
chr1 (57-219)||(27201623-27201788)
chr1 (57-219)||(27474257-27474419)
chr1 (81-218)||(11596513-11596650)
chr1 (95-216)||(35253209-35253329)
chr1 (63-219)||(45402077-45402235)
chr1 (57-133)||(34714599-34714675)
chr1 (81-219)||(6925100-6925239)
chr1 (81-209)||(20036220-20036350)
chr1 (52-125)||(8197014-8197087)
chr1 (60-125)||(40424721-40424786)
chr1 (81-191)||(6983858-6983967)
chr1 (81-216)||(25468285-25468421)
chr1 (70-189)||(33222973-33223093)
chr1 (57-122)||(19932869-19932934)
chr1 (81-137)||(2435889-2435945)
chr1 (83-219)||(9939463-9939603)
chr1 (61-132)||(25290143-25290214)
chr1 (149-219)||(4349707-4349777)
chr1 (63-219)||(18741976-18742137)
chr1 (56-218)||(44485129-44485291)
chr1 (149-218)||(15505633-15505702)
chr1 (81-137)||(2435995-2436051)
chr1 (81-137)||(17470448-17470504)
chr1 (81-137)||(35117870-35117926)
chr1 (150-197)||(21910690-21910737)
chr1 (149-219)||(10378754-10378824)
chr1 (83-137)||(22327101-22327155)
chr1 (149-219)||(31382233-31382303)
chr1 (81-220)||(50811939-50812080)
chr1 (70-123)||(4430142-4430195)
chr1 (72-137)||(22151495-22151560)
chr1 (97-219)||(35005139-35005264)
chr1 (81-137)||(50760328-50760384)
chr1 (81-137)||(52910217-52910273)
chr1 (81-135)||(23371124-23371178)
chr1 (153-219)||(23796538-23796604)
chr1 (81-130)||(10378834-10378883)
chr1 (175-219)||(50606498-50606542)
chr1 (149-220)||(43768208-43768279)
chr1 (166-220)||(4249461-4249515)
chr1 (166-220)||(4249785-4249839)
chr1 (166-220)||(4250109-4250163)
chr1 (171-217)||(4587584-4587630)
chr1 (59-137)||(21723642-21723719)
chr1 (81-219)||(35019230-35019368)
chr1 (91-133)||(43768168-43768210)
chr1 (149-219)||(42304226-42304298)
chr1 (81-137)||(19701570-19701626)
chr1 (175-219)||(30555210-30555254)
chr1 (164-219)||(45264418-45264474)
[»] chr5 (44 HSPs)
chr5 (57-219)||(41014272-41014434)
chr5 (58-216)||(35710267-35710424)
chr5 (57-219)||(38879534-38879699)
chr5 (58-210)||(8170012-8170163)
chr5 (61-219)||(4619123-4619284)
chr5 (58-219)||(24448844-24449006)
chr5 (61-195)||(43334159-43334297)
chr5 (55-220)||(27328703-27328871)
chr5 (91-216)||(32703411-32703535)
chr5 (57-137)||(37024656-37024736)
chr5 (59-215)||(2838733-2838890)
chr5 (58-137)||(1565385-1565464)
chr5 (89-190)||(22907913-22908014)
chr5 (57-137)||(23974734-23974813)
chr5 (57-218)||(22600407-22600569)
chr5 (57-137)||(22187238-22187318)
chr5 (61-216)||(22861691-22861844)
chr5 (81-219)||(208946-209085)
chr5 (149-219)||(7097779-7097849)
chr5 (63-137)||(31299591-31299665)
chr5 (87-216)||(1405170-1405300)
chr5 (84-141)||(10634244-10634301)
chr5 (149-210)||(34154842-34154903)
chr5 (149-219)||(43574652-43574722)
chr5 (149-219)||(13801786-13801858)
chr5 (166-219)||(16957377-16957430)
chr5 (81-195)||(19142986-19143100)
chr5 (149-208)||(7368442-7368501)
chr5 (81-123)||(39079882-39079924)
chr5 (81-123)||(39301100-39301142)
chr5 (84-137)||(34074664-34074717)
chr5 (149-194)||(41425994-41426039)
chr5 (88-124)||(1850624-1850660)
chr5 (153-204)||(11657733-11657785)
chr5 (70-134)||(17419880-17419944)
chr5 (58-102)||(19438703-19438747)
chr5 (81-137)||(28516536-28516592)
chr5 (81-120)||(31362454-31362493)
chr5 (166-219)||(10306493-10306547)
chr5 (70-123)||(12006445-12006499)
chr5 (166-219)||(12477139-12477193)
chr5 (149-219)||(16880666-16880736)
chr5 (175-219)||(4654434-4654478)
chr5 (150-219)||(12006347-12006418)
[»] chr3 (52 HSPs)
chr3 (57-195)||(16735416-16735554)
chr3 (56-219)||(39203490-39203652)
chr3 (53-219)||(40272831-40272998)
chr3 (57-220)||(8247705-8247871)
chr3 (57-216)||(1217065-1217223)
chr3 (57-217)||(22609742-22609901)
chr3 (57-219)||(5173738-5173903)
chr3 (58-220)||(46421053-46421218)
chr3 (58-219)||(13730621-13730785)
chr3 (62-216)||(22122939-22123092)
chr3 (58-219)||(52926238-52926391)
chr3 (57-219)||(13628809-13628975)
chr3 (71-218)||(26869696-26869843)
chr3 (58-137)||(10870053-10870132)
chr3 (59-219)||(29366739-29366902)
chr3 (58-217)||(12914056-12914216)
chr3 (81-219)||(26573126-26573265)
chr3 (57-180)||(7696945-7697067)
chr3 (58-219)||(6411841-6412002)
chr3 (57-137)||(9607178-9607258)
chr3 (58-188)||(4495714-4495845)
chr3 (93-219)||(33926094-33926221)
chr3 (81-195)||(34420686-34420802)
chr3 (84-218)||(30928167-30928302)
chr3 (81-137)||(53062037-53062093)
chr3 (111-216)||(31592878-31592982)
chr3 (149-216)||(34771386-34771453)
chr3 (81-185)||(45620881-45620987)
chr3 (90-137)||(516417-516464)
chr3 (149-208)||(15797288-15797347)
chr3 (172-219)||(24851320-24851367)
chr3 (93-188)||(54032609-54032705)
chr3 (152-219)||(54484762-54484829)
chr3 (57-137)||(12525385-12525462)
chr3 (85-134)||(7942993-7943042)
chr3 (59-112)||(25517300-25517353)
chr3 (150-219)||(45948857-45948926)
chr3 (81-137)||(25944468-25944524)
chr3 (149-195)||(47624109-47624155)
chr3 (150-219)||(54374364-54374434)
chr3 (149-219)||(353368-353440)
chr3 (166-219)||(25517189-25517242)
chr3 (57-97)||(9276249-9276289)
chr3 (81-137)||(35417915-35417971)
chr3 (93-194)||(45139520-45139624)
chr3 (153-219)||(829461-829528)
chr3 (61-103)||(21874999-21875041)
chr3 (168-210)||(26292417-26292459)
chr3 (173-219)||(35417996-35418042)
chr3 (149-219)||(14987025-14987097)
chr3 (61-98)||(23871418-23871455)
chr3 (149-219)||(49013492-49013564)
[»] chr2 (56 HSPs)
chr2 (57-216)||(21779283-21779441)
chr2 (58-219)||(8455335-8455497)
chr2 (61-219)||(25249757-25249915)
chr2 (58-195)||(12023962-12024099)
chr2 (52-195)||(22371005-22371146)
chr2 (57-219)||(25079736-25079900)
chr2 (57-219)||(14530271-14530436)
chr2 (89-219)||(25641487-25641617)
chr2 (58-219)||(9671134-9671295)
chr2 (59-219)||(10543653-10543816)
chr2 (57-216)||(23397719-23397877)
chr2 (75-208)||(17623535-17623669)
chr2 (60-219)||(11514392-11514551)
chr2 (60-219)||(17896215-17896376)
chr2 (58-219)||(5840982-5841146)
chr2 (95-219)||(14444720-14444844)
chr2 (59-219)||(24200642-24200805)
chr2 (75-203)||(17667973-17668102)
chr2 (58-137)||(17705449-17705528)
chr2 (60-219)||(19977733-19977893)
chr2 (95-219)||(10546153-10546279)
chr2 (81-192)||(99311-99421)
chr2 (84-218)||(17380257-17380391)
chr2 (81-218)||(21377093-21377231)
chr2 (70-219)||(39914325-39914475)
chr2 (64-183)||(27573581-27573700)
chr2 (82-193)||(5450263-5450376)
chr2 (58-133)||(7214488-7214563)
chr2 (89-220)||(31821361-31821491)
chr2 (81-137)||(40416973-40417029)
chr2 (82-137)||(44604832-44604887)
chr2 (59-137)||(14544018-14544096)
chr2 (149-219)||(36871538-36871607)
chr2 (57-103)||(39189557-39189603)
chr2 (58-220)||(26684638-26684803)
chr2 (70-219)||(24860007-24860155)
chr2 (82-219)||(31158458-31158598)
chr2 (81-133)||(45235924-45235976)
chr2 (81-208)||(4516381-4516509)
chr2 (152-219)||(24890460-24890527)
chr2 (59-136)||(17472926-17473003)
chr2 (172-216)||(4794871-4794915)
chr2 (93-137)||(19614981-19615025)
chr2 (175-219)||(23488555-23488599)
chr2 (81-137)||(29419991-29420047)
chr2 (81-137)||(33795262-33795318)
chr2 (81-137)||(44643499-44643555)
chr2 (168-219)||(31523296-31523347)
chr2 (81-135)||(35017794-35017849)
chr2 (176-218)||(1289095-1289137)
chr2 (70-103)||(27466266-27466299)
chr2 (150-219)||(30826083-30826151)
chr2 (149-194)||(32781332-32781377)
chr2 (166-219)||(39499249-39499302)
chr2 (169-201)||(4252656-4252688)
chr2 (177-217)||(41409936-41409976)
[»] chr6 (37 HSPs)
chr6 (58-216)||(1346918-1347075)
chr6 (58-216)||(1354779-1354936)
chr6 (70-218)||(12221935-12222086)
chr6 (56-219)||(29355874-29356041)
chr6 (60-133)||(3815183-3815256)
chr6 (57-137)||(8409196-8409276)
chr6 (57-219)||(9161076-9161240)
chr6 (57-137)||(14975182-14975262)
chr6 (72-195)||(2166453-2166579)
chr6 (72-195)||(2178086-2178212)
chr6 (58-131)||(33922936-33923009)
chr6 (73-137)||(6024202-6024266)
chr6 (61-137)||(12063424-12063500)
chr6 (58-137)||(15866139-15866218)
chr6 (59-203)||(13905015-13905158)
chr6 (62-122)||(20400625-20400685)
chr6 (82-194)||(28007604-28007717)
chr6 (58-189)||(1941809-1941941)
chr6 (57-132)||(22967124-22967199)
chr6 (57-132)||(23821194-23821269)
chr6 (70-137)||(24734599-24734666)
chr6 (149-216)||(26097204-26097271)
chr6 (166-219)||(32579488-32579541)
chr6 (74-130)||(14553482-14553537)
chr6 (74-133)||(8417442-8417501)
chr6 (166-217)||(13267788-13267839)
chr6 (149-216)||(25557769-25557836)
chr6 (170-219)||(11395827-11395877)
chr6 (166-219)||(3815096-3815149)
chr6 (165-219)||(14975109-14975165)
chr6 (166-219)||(23930146-23930199)
chr6 (149-219)||(24734688-24734759)
chr6 (81-122)||(32728273-32728314)
chr6 (81-137)||(12889403-12889459)
chr6 (167-195)||(15866082-15866110)
chr6 (70-114)||(19649292-19649336)
chr6 (62-118)||(23930247-23930303)
[»] scaffold0168 (1 HSPs)
scaffold0168 (58-216)||(30533-30690)
[»] scaffold0187 (4 HSPs)
scaffold0187 (61-209)||(10079-10226)
scaffold0187 (61-209)||(20407-20554)
scaffold0187 (57-123)||(8898-8964)
scaffold0187 (57-123)||(19226-19292)
[»] scaffold0057 (5 HSPs)
scaffold0057 (57-219)||(24791-24949)
scaffold0057 (70-219)||(46797-46947)
scaffold0057 (81-125)||(46997-47041)
scaffold0057 (150-220)||(46725-46796)
scaffold0057 (152-216)||(43706-43771)
[»] scaffold0005 (1 HSPs)
scaffold0005 (56-187)||(226456-226589)
[»] scaffold0258 (1 HSPs)
scaffold0258 (60-219)||(13043-13202)
[»] scaffold0223 (1 HSPs)
scaffold0223 (65-216)||(11093-11242)
[»] scaffold0024 (1 HSPs)
scaffold0024 (57-132)||(83828-83903)
[»] scaffold0311 (1 HSPs)
scaffold0311 (74-219)||(10780-10926)
[»] scaffold1176 (1 HSPs)
scaffold1176 (81-219)||(1606-1743)
[»] scaffold0194 (1 HSPs)
scaffold0194 (59-135)||(24619-24695)
[»] scaffold0049 (1 HSPs)
scaffold0049 (63-219)||(58936-59095)
[»] scaffold0036 (1 HSPs)
scaffold0036 (74-193)||(35062-35184)
[»] scaffold0254 (1 HSPs)
scaffold0254 (72-137)||(4125-4190)
[»] scaffold0015 (1 HSPs)
scaffold0015 (149-216)||(48656-48723)
[»] scaffold0180 (1 HSPs)
scaffold0180 (151-216)||(24155-24220)
[»] scaffold0031 (1 HSPs)
scaffold0031 (72-137)||(43097-43162)
[»] scaffold0116 (1 HSPs)
scaffold0116 (81-132)||(8868-8919)
[»] scaffold0018 (1 HSPs)
scaffold0018 (70-219)||(72886-73030)
[»] scaffold0954 (1 HSPs)
scaffold0954 (167-219)||(3608-3660)


Alignment Details
Target: chr7 (Bit Score: 323; Significance: 0; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 18 - 373
Target Start/End: Complemental strand, 28078352 - 28077997
Alignment:
Q  18 atcctctaggtatttttgatttgatagttttagtgttactgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggtt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28078352 atcctctaggtatttttgatttgatagttttagtgttactgaggggtaaccctggcgcaactcgtgaagttgttgtcatgtgactgtaaggtcacgggtt 28078253  T
Q  118 caagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    |||||||||||||||| |||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28078252 caagtcctagaaacagtctcgtgtaaaaaaacagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 28078153  T
Q  218 taaagtaccaccctttagtgttactaatcatgaacgttggtcatccttcttaaaacactttcagtgtcccttagctcaccaactgagctatctgcgaggg 317  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  28078152 taaagtaccaccctttagtgttactaatcatgaacgttggtcatccttcttaaaacgctttcagtgtcccttagctcaccaactgagctatctgcgaggg 28078053  T
Q  318 atgttgctgtcaaaattatgtgccactgacatggtttaatggttttgtttttgtct 373  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28078052 atgttgctgtcaaaattatgtgccactgacatggtttaatggttttgtttttgtct 28077997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 21172188 - 21172031
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||       |||||||||    
T  21172188 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacagggtaag 21172090  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  21172089 gctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 21172031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 32758214 - 32758372
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||       ||||||||    
T  32758214 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgt-gtaaaacagggtaa 32758312  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    || ||  | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  32758313 ggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 32758372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 65 - 216
Target Start/End: Complemental strand, 10693245 - 10693095
Alignment:
Q  65 aaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcat 164  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        ||||||||| ||| |    
T  10693245 aaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaag-agggtaaggctgcgt 10693147  T
Q  165 gcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
     |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  10693146 acaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 10693095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 48735303 - 48735144
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcc-tagaaacagcctcgtgtnnnnnnncagggta 155  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | |||||| |||| |||       || ||||    
T  48735303 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtccttggaaacaacctcttgt-gtaaaacacggta 48735205  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    ||| ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  48735204 aggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 48735144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 2541202 - 2541038
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgact-gtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggt 154  Q
    |||||||||||| |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||        ||||||    
T  2541202 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggt 2541103  T
Q  155 aaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||| ||| | | ||||||||||||||||||||||||||||   ||||| |||||| ||||||||    
T  2541102 aaggctgcgtactatacaccaaatggtgggaccccttcccggtccctgcgtatgcgggagcttta 2541038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 42798623 - 42798782
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||||| ||| |||        || |||||    
T  42798623 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttggaaacagtctcttgtgtaaaaaacaaggtaa 42798722  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    || ||| | ||||||||||||||||||||||| |||||| | |||||||||||| |||||    
T  42798723 ggctgcgtacaatacaccaaatggtgggaccctttcccggaccctgcatatgcgggagct 42798782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 34626389 - 34626227
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| | |||||||| |||||||||||||||||||| || |||| ||| | |||||||||| ||||||||||| |||       ||||||||    
T  34626389 tgaggggtaaccttagcgcaactggtaaagttgttgtcatgtgattgaaaggccacagattcaagtcctggaaacagcctcctgtgtaaaaacagggtaa 34626290  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | |||||||||||||||||||| ||||||||| | ||||| |||||| ||||||||    
T  34626289 ggctgcgttcaatacaccaaatggtgggatcccttcccggaccctgcgtatgcgggagcttta 34626227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 42805477 - 42805642
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||    
T  42805477 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 42805576  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||  | ||||||||||  |||||||||||||||||||| | || ||||||||| ||||||||    
T  42805577 aggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 42805642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 47078034 - 47077877
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||        || ||||     
T  47078034 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaat-agagtaaa 47077936  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    ||||| | |||||||| |||||||||||||||||||| || ||| |||||||| |||||    
T  47077935 gttgcgtacaatacacaaaatggtgggaccccttcccaaaccctacatatgcgggagct 47077877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 64 - 217
Target Start/End: Original strand, 40463837 - 40463990
Alignment:
Q  64 taaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgca 163  Q
    ||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||       | |||||||| |||     
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatagaaacagtctcttgtgtaaaaactgggtaaggctgcg 40463936  T
Q  164 tgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    |  |||||||||||||||||||||||||| || | ||||| |||||| ||||||    
T  40463937 tataatacaccaaatggtgggaccccttctcggaccctgcgtatgcgggagctt 40463990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 70 - 210
Target Start/End: Original strand, 27629600 - 27629741
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaa 168  Q
    |||||||||| |||||||||||||||| |||| | ||||||||||||||||||||| ||||||||||| |||        |||||||||||||| |  ||    
T  27629600 tggcgcaactggtaaagttgttgtcatttgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggttgcgtaaaa 27629699  T
Q  169 tacaccaaatggtgggaccccttcccgaatcctgcatatgcg 210  Q
    |||||||||||||||||||||||||||   ||||||||||||    
T  27629700 tacaccaaatggtgggaccccttcccgggccctgcatatgcg 27629741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 35334996 - 35334835
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |||||||       ||||||||    
T  35334996 tgagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgagttcaagtcctggaaacagtctcgtgt-aaaaaacagggtaa 35334898  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |  ||  | ||||||||| |||||||||||||||||||| | ||||| |||||  ||||||||    
T  35334897 gactgtgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgcaggagcttta 35334835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 86 - 216
Target Start/End: Complemental strand, 42391251 - 42391122
Alignment:
Q  86 gttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtggga 185  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||| || |||       |||||||||| ||| | ||||||||||||||||||||    
T  42391251 gttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcttcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtggga 42391153  T
Q  186 ccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||||| | |||||||||||| |||||    
T  42391152 ccccttcccggaccctgcatatgcgggagct 42391122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 58 - 218
Target Start/End: Original strand, 47716413 - 47716576
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||| ||||| | |||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| |||        ||||||||    
T  47716413 gaggggtaaccttggcacaactggaaaagttgttgccatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 47716512  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    || ||| | ||||||||||  |||||||||||||||||||| | || ||||||||| |||||||    
T  47716513 ggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttt 47716576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 58 - 209
Target Start/End: Original strand, 46354148 - 46354302
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||||| |||||| |||| |||        ||||||||    
T  46354148 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaa 46354247  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgc 209  Q
    || ||| | ||||||||||  |||||||||||||||||||| | || ||||||||    
T  46354248 ggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgc 46354302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 33872067 - 33871929
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||||||||||||||||||||| |||||| |||||||||||||| |||||| |||| |||       |||| ||||| ||| | |||||||||||||||    
T  33872067 gtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctcttgtgtaaaaacaggataaggctgcgtacaatacaccaaatgg 33871968  T
Q  181 tgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||  | ||||  |||||||||||||||    
T  33871967 tgggaccccttcccagaccctgtgtatgcgagagcttta 33871929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 42496017 - 42495937
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  42496017 tgaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctc 42495937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 70 - 217
Target Start/End: Complemental strand, 19427058 - 19426911
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaa 168  Q
    |||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||         ||||||||  ||| | |||    
T  19427058 tggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaagactgcgtacaa 19426959  T
Q  169 tacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    ||||||||||||||||| |||||| || | |||||||||||||||||||    
T  19426958 tacaccaaatggtggga-cccttctcggaccctgcatatgcgagagctt 19426911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 7193039 - 7193118
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctcgaaacaacctc 7193118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 43557426 - 43557505
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||    
T  43557426 gaggggtaaccttgccgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctc 43557505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 71 - 193
Target Start/End: Complemental strand, 11617756 - 11617633
Alignment:
Q  71 ggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaat 169  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| |||||| |||| |||        |||||||||  ||| | ||||    
T  11617756 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaagactgcgtacaat 11617657  T
Q  170 acaccaaatggtgggaccccttcc 193  Q
    ||||||||||||||||||||||||    
T  11617656 acaccaaatggtgggaccccttcc 11617633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 18326989 - 18327067
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||  |||||||||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttgaaggtcacgggttcaagtcccggaaacagcctc 18327067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 14732999 - 14732924
Alignment:
Q  62 ggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||| |||||||||| ||||||||||||||||||||||| || |||| ||||||||||||| |||||||||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaagtcatgggttcaagtcctggaaacagcctc 14732924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 193
Target Start/End: Original strand, 42476825 - 42476961
Alignment:
Q  56 ctgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggta 155  Q
    ||||||||||||  ||||| |||| ||||||||||||||||||||||  |||||||||| ||||||| || ||||||| ||| |||       || ||||    
T  42476825 ctgaggggtaacattggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacggattcaagttctggaaacagtctcttgt-gtaaaacaaggta 42476923  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcc 193  Q
    ||| ||| | ||||||||||||||||||||||||||||    
T  42476924 aggctgcgtacaatacaccaaatggtgggaccccttcc 42476961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 7794682 - 7794608
Alignment:
Q  63 gtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||| | |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||    
T  7794682 gtaaccttagcgcaactggtaaagttgttgttatgtgactggaaggtcacgggttcaagtcctggaaacagcctc 7794608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 59 - 194
Target Start/End: Complemental strand, 8149126 - 8148989
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaa 156  Q
    |||||||||| |||| ||||| |||| |||||||||||||||||| || |||||| |||||||||||  ||||  ||||  ||||        |||||||    
T  8149126 aggggtaaccttggcacaactggtaatgttgttgtcatgtgactgcaaagtcacgagttcaagtcctgaaaactacctcttgtgttaaaaaatagggtaa 8149027  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttccc 194  Q
    |||||| | |||||||||||||||||||||||||||||    
T  8149026 ggttgcgtacaatacaccaaatggtgggaccccttccc 8148989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 195
Target Start/End: Original strand, 19265792 - 19265906
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||||||||||||| ||||||| ||||||||||||||||||| | || |||||| | |||        ||||||||| ||| | |||||||||||||||    
T  19265792 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcttggatacagccgcttgtgtaaaaagagggtaaggctgcgtacaatacaccaaatgg 19265891  T
Q  181 tgggaccccttcccg 195  Q
    |||||||||||||||    
T  19265892 tgggaccccttcccg 19265906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 2663112 - 2662985
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||||| |  ||||  |||||||||||| ||||||||||| |||        ||||||||    
T  2663112 gaggggtaaccttggcgcaactagtaaagttgttgttatgtgactgga--gtcataggttcaagtcctggaaacagcctcttgtgtaaaat-agggtaag 2663016  T
Q  158 gttgcatgcaatacaccaaatggtgggaccc 188  Q
    | ||| | |||||||||||||||||||||||    
T  2663015 gctgcgtacaatacaccaaatggtgggaccc 2662985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 59 - 137
Target Start/End: Complemental strand, 5180337 - 5180259
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||| || ||||||| ||||||||||||||||||||||| ||||||| |||||||| | || |||||||||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaacttctggaaacagcctc 5180259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 81 - 194
Target Start/End: Complemental strand, 28362303 - 28362189
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||||||||| ||||| |||        |  ||||||| ||| | ||||||||||||||    
T  28362303 gtaaagttgttgtcatgtggctgaaaggtcacaggttcaagtcctagaaactgcctcttgtgtaaaaaacttggtaaggctgcgtacaatacaccaaatg 28362204  T
Q  180 gtgggaccccttccc 194  Q
    |||||||||||||||    
T  28362203 gtgggaccccttccc 28362189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 216
Target Start/End: Original strand, 11741774 - 11741906
Alignment:
Q  83 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtg 182  Q
    ||||||||||||||||||||| ||||||| |||||||||||||  ||||||| ||  ||        ||||||||| ||| | |||||||||||||||||    
T  11741774 aaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacagcttctagtgtaaaat-agggtaaggctgcgtacaatacaccaaatggtg 11741872  T
Q  183 ggaccccttcccgaatcctgcatatgcgagagct 216  Q
    ||| ||||||||| || ||||| ||||| |||||    
T  11741873 ggatcccttcccggattctgcacatgcgggagct 11741906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 218
Target Start/End: Original strand, 13805079 - 13805216
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||| |||| ||||||  ||         |||||||| ||  | |||||||||||||||    
T  13805079 gtaaagttgttgtcatgtgactgaaaggtaacgggttcaagtcctggaaatagcctctggtgtaaaacaggggtaaggctgtgtacaatacaccaaatgg 13805178  T
Q  181 tgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    ||||||| ||||| | | ||||| |||||| |||||||    
T  13805179 tgggaccacttcctggaccctgcgtatgcgggagcttt 13805216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 58 - 130
Target Start/End: Complemental strand, 22699151 - 22699079
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaa 130  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| ||||| | ||||||||||||| ||||    
T  22699151 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggttatgggttcaagtcctggaaa 22699079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 95 - 219
Target Start/End: Complemental strand, 38262340 - 38262215
Alignment:
Q  95 atgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnnc-agggtaaggttgcatgcaatacaccaaatggtgggaccccttcc 193  Q
    ||||||||| ||||||||||||||||||||| ||||||| ||| |||         | ||||| ||||||| |||||||||||||| |||||||||||||    
T  38262340 atgtgactggaaggtcacgggttcaagtcctggaaacagtctcttgtgtaaaaaatatggtaatgttgcatacaatacaccaaatgatgggaccccttcc 38262241  T
Q  194 cgaatcctgcatatgcgagagcttta 219  Q
    ||||  |||| |||||| ||||||||    
T  38262240 cgaacactgcgtatgcgggagcttta 38262215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 29907394 - 29907452
Alignment:
Q  81 gtaaagttgttgt--catgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||||  |||||||||| |||||||||||||||||||||||||||||||||    
T  29907394 gtaaagttgttgtatcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctc 29907452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 48123642 - 48123531
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||| ||||||| ||| ||||||| ||||||||||||| ||||||||||| |||        ||||||||   ||||| ||||||||||||||    
T  48123642 gtaaagttgttatcatgtgtctgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaataacagggtaaaactgcatacaatacaccaaatg 48123543  T
Q  180 gtgggacccctt 191  Q
    ||||||||||||    
T  48123542 gtgggacccctt 48123531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 81 - 183
Target Start/End: Original strand, 6736867 - 6736969
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||  ||||| |||| |||       || ||||||  ||||| |||||||||||||||    
T  6736867 gtaaagttgttgtcatgcgactgaaaggtcacgggttcaagtcctcaaaacaacctcttgtataaaaacaaggtaagactgcatacaatacaccaaatgg 6736966  T
Q  181 tgg 183  Q
    |||    
T  6736967 tgg 6736969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 14099164 - 14099047
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||| |||| |||||  |||        |||| ||||  ||| | ||||||||||||||    
T  14099164 gtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaaatg 14099065  T
Q  180 gtgggaccccttcccgaa 197  Q
    ||||||||||||||||||    
T  14099064 gtgggaccccttcccgaa 14099047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 197
Target Start/End: Complemental strand, 14409181 - 14409064
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||| |||| |||||  |||        |||| ||||  ||| | ||||||||||||||    
T  14409181 gtaaagttgttgtcatgtgactgaaaggtcatgggttgaagtcctggaaatagccttttgtgtaaaaaacaggttaagactgcgtacaatacaccaaatg 14409082  T
Q  180 gtgggaccccttcccgaa 197  Q
    ||||||||||||||||||    
T  14409081 gtgggaccccttcccgaa 14409064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 105 - 218
Target Start/End: Complemental strand, 18512586 - 18512473
Alignment:
Q  105 aaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgca 204  Q
    ||||||||||||||||||||| |||||| | || |||        ||||||||| ||| | ||||||||| |||||||||||||||||||| | |||||     
T  18512586 aaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaatagggtaaggctgcgtacaatacaccgaatggtgggaccccttcccggaccctgcg 18512487  T
Q  205 tatgcgagagcttt 218  Q
    |||||| |||||||    
T  18512486 tatgcgggagcttt 18512473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 193
Target Start/End: Complemental strand, 23419832 - 23419719
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||| ||||||||||||  |||||||| ||||||||| || ||||||||||| |||        |||||||||  ||| | ||||||||||||||    
T  23419832 gtaaagttgctgtcatgtgactaaaaggtcacaggttcaagttctggaaacagcctcttgtgtaaaaaacagggtaagactgcgtacaatacaccaaatg 23419733  T
Q  180 gtgggaccccttcc 193  Q
    ||||||||||||||    
T  23419732 gtgggaccccttcc 23419719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 133
Target Start/End: Complemental strand, 1424079 - 1424016
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag 133  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||| ||||| |||| |||||||    
T  1424079 tggcgcaactggtaaagttgttgttatgtgactggaaggtcacggattcaaatcctggaaacag 1424016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 219
Target Start/End: Original strand, 18747472 - 18747603
Alignment:
Q  90 ttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggacc 187  Q
    |||||| ||||||| ||||||||||| ||||||| | ||||||||||   ||||       |||||||||| ||| |  |||||||||| ||||||||||    
T  18747472 ttgtcacgtgactgaaaggtcacgggatcaagtcttggaaacagccttttgtgtaaaaaagcagggtaaggctgcgtataatacaccaattggtgggacc 18747571  T
Q  188 ccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||| ||| ||||| |||||| ||||||||    
T  18747572 ccttcctgaaccctgcgtatgcgggagcttta 18747603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 39123867 - 39123917
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaac 131  Q
    ||||||||||||||||||||||| || | ||||||||||||||||||||||    
T  39123867 gtaaagttgttgtcatgtgactgaaacgacacgggttcaagtcctagaaac 39123917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 188
Target Start/End: Complemental strand, 44123779 - 44123672
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||||||| ||||||||||||| ||| | |||||||||||| || ||||||||||| |||       || |||||||||||||| ||||||||| ||      
T  44123779 gtaaagttggtgtcatgtgactgaaagattacgggttcaagtactggaaacagcctcttgtgtaaaaacaaggtaaggttgcatgaaatacaccatataa 44123680  T
Q  181 tgggaccc 188  Q
    ||||||||    
T  44123679 tgggaccc 44123672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 7879687 - 7879752
Alignment:
Q  152 ggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    ||||||| ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||||    
T  7879687 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctt 7879752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 7644933 - 7644989
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||| ||||||| | ||||||| ||||||||||||||||||||| |||||||||||    
T  7644933 gtaaatttgttgtaacgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 7644989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 12473257 - 12473325
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcct 125  Q
    ||||||||| || |||||||||  ||||||||||||||||||  ||| ||||||| |||||||||||||    
T  12473257 tgaggggtagccttggcgcaaccggtaaagttgttgtcatgtatctgaaaggtcatgggttcaagtcct 12473325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 19266427 - 19266564
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtg-tnnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||||||||||| ||||||  |||||||||||||  ||| |||| | ||         |||||||||| ||| | |||||||||||||     
T  19266427 gtaaagttgttgtcatgtgactgaaaggtcgtgggttcaagtcctgaaaatagccacttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaatt 19266526  T
Q  180 gtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    |||||| ||||||||| | ||||| |||||| ||||||    
T  19266527 gtgggatcccttcccggaccctgcgtatgcgggagctt 19266564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 27889388 - 27889336
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||||||||||||||||||||||||||||| | ||||| |||||| |||||||    
T  27889388 caatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 27889336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 132
Target Start/End: Complemental strand, 3469337 - 3469286
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 132  Q
    ||||||||||||||||||||||| |||||||| |  ||||||||||||||||    
T  3469337 gtaaagttgttgtcatgtgactgaaaggtcacagactcaagtcctagaaaca 3469286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 21447544 - 21447623
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| ||||||||||  |||| |||||||||||| | || |||||||||| |||||||| |  ||||||||||    
T  21447544 gaggggtaaccttggcgcaactgataaatttgttgtcatgtaattggaaggtcacggattcaagtcttgaaaacagcctc 21447623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 38604572 - 38604643
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    |||||||||| ||| | ||||||||||||||||| |||||||| ||| | ||||| |||||| |||||||||    
T  38604572 cagggtaaggctgcgtacaatacaccaaatggtgagacccctttccggaccctgcgtatgcgggagctttaa 38604643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 21566498 - 21566552
Alignment:
Q  166 caatacaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||| |||| ||||||||||||||| |||||||||||| ||||||||    
T  21566498 caatacaccaaaatggtaggaccccttcccgaaccctgcatatgcgggagcttta 21566552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 35787355 - 35787290
Alignment:
Q  152 ggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    ||||||||||| | ||||||||||||||| |||||||||||||| | | ||| |||||| ||||||    
T  35787355 ggtaaggttgcgtacaatacaccaaatggcgggaccccttcccggaccttgcgtatgcgggagctt 35787290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 16341255 - 16341311
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| ||||||   || |||||||||||||||||| ||||||||||||||    
T  16341255 gtaaagttgttatcatgtatttgaaaggtcacgggttcaagttctagaaacagcctc 16341311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 21139833 - 21139789
Alignment:
Q  153 gtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaa 197  Q
    ||||||||| || || |||||||||||||||||||||||||||||    
T  21139833 gtaaggttggatacagtacaccaaatggtgggaccccttcccgaa 21139789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 42102043 - 42101987
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| ||||||| |||||||   ||||||||||| |||||||||||    
T  42102043 gtaaagttgttgtcacgtgactggaaggtcaaaagttcaagtcctggaaacagcctc 42101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 61 - 112
Target Start/End: Complemental strand, 29140538 - 29140487
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcac 112  Q
    |||||| | |||||||||| |||||||||||||||||| |||| ||||||||    
T  29140538 gggtaatcttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcac 29140487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 23066014 - 23065945
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||| ||| ||||| | |||||||||| ||| ||||| ||||| |||||||||||||||| | |||||||    
T  23066014 caggataaagttgcgtacaatacaccatatgatgggatccctttccgaatcctgcatatgtgggagcttt 23065945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 23231621 - 23231673
Alignment:
Q  167 aatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||| |||| ||||||||||||||||| ||||| ||||||  |||||||    
T  23231621 aatacaccgaatgatgggaccccttcccgaaccctgcgtatgcggcagcttta 23231673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 96; Significance: 6e-47; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 13160655 - 13160815
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    ||||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||||||    
T  13160655 tgaggggtaacctcggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcttgtgtaaaaacagggtaa 13160754  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    || ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||||    
T  13160755 ggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctt 13160815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 12670429 - 12670272
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       |||||||||    
T  12670429 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacagggtaag 12670331  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  12670330 gctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 12670272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 30454277 - 30454119
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       || |||||    
T  30454277 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacaaggtaa 30454179  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    || ||| | | |||||||||||||||||||||||||||| | |||||||||||| |||||    
T  30454178 ggctgcgtacgatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 30454119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 28817808 - 28817645
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||    
T  28817808 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 28817709  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||| | ||||||||| |||||||||||||||||||| | ||||| |||||| ||||||||    
T  28817708 aggctgcgtacaatacacccaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 28817645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 36720749 - 36720912
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||    
T  36720749 tgaggggtaaccttggcgtaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 36720848  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||| | |||||||||||||||||||||||||||||| | ||||| ||||||  |||||||    
T  36720849 aggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcggaagcttta 36720912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 35261633 - 35261795
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||| |||        ||||||||    
T  35261633 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagccctggaaacagtctcttgtgtaaaaaacagggtaa 35261732  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||| | |||||||||||||||||||||||||||| | | ||||| |||||| ||||||||    
T  35261733 ggttgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagcttta 35261795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 217
Target Start/End: Original strand, 45071219 - 45071378
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||  ||| |||||||||||||||||||| ||||||||||||||||||||| || ||||||||||| |||       |||||||||    
T  45071219 gaggggtaaccttggcgatactggtaaagttgttgtcatgtgattgtaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaacagggtaag 45071318  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    | ||| | |||||||||||||||||||||||||||||| | | ||| |||||| ||||||    
T  45071319 gctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgcgggagctt 45071378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 7136710 - 7136546
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||| |||        ||||||||    
T  7136710 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaccagggtaa 7136611  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | ||||||||||  |||||||||||||||||||| | || ||||||||| ||||||||    
T  7136610 ggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 7136546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 17823529 - 17823692
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||| | |||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||        |||| ||    
T  17823529 tgaggggtaatcttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaccaggata 17823628  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||  ||| |  ||||||||||||||||| ||||||||||||| |||||||||||  ||||||||    
T  17823629 agactgcgtaaaatacaccaaatggtggaaccccttcccgaaccctgcatatgcaggagcttta 17823692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 18164941 - 18164779
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||| | |||||||||  || |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       ||||||||    
T  18164941 tgaggggtaatcttggcgcaaccggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaa 18164842  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||| | |||||||||||| | || ||||  |||||| | ||||| |||||| ||||||||    
T  18164841 ggttgcgtacaatacaccaaaggatgtgaccatttcccggaccctgcgtatgcgggagcttta 18164779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 29521866 - 29521704
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtg-tnnnnnnncagggtaa 156  Q
    ||||||||||| ||||||||||  ||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||| || |       ||||||||    
T  29521866 gaggggtaaccttggcgcaactgataaagttgttgtcgtgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtttaaaaaacagggtaa 29521767  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | |||||||||||||||||||| ||| ||||  | ||||| |||||| ||||||||    
T  29521766 ggctgcgtacaatacaccaaatggtgggaacccatcccagaccctgcgtatgcgggagcttta 29521704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 39461178 - 39461013
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||| |||        ||| |||    
T  39461178 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgagactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagagta 39461079  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||| | ||||||||||  ||||||| |||||||||||| | ||||| |||||| ||||||||    
T  39461078 aggctgcgtacaatacaccaataatggtgagaccccttcccggaccctgcgtatgcgggagcttta 39461013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 44530103 - 44530265
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||| ||||||||||||  ||||||||||||||||||| | |||||| |||| |||        ||||||||    
T  44530103 gaggggtaaccttggcgcaactggtaaagttgctgtcatgtgactagaaggtcacgggttcaagtcttggaaacaacctcttgtgtaaaaaacagggtaa 44530202  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | |||||||||||||||||||||||||||| | | ||||| |||||| ||||||||    
T  44530203 ggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagcttta 44530265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 215
Target Start/End: Complemental strand, 20869677 - 20869523
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       |||||||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacagggtaag 20869579  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagc 215  Q
    | ||  | |||||||||||  |||| |||||||||||| | |||||||||||| ||||    
T  20869578 gctgtgtacaatacaccaa--ggtgagaccccttcccggaccctgcatatgcgggagc 20869523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 2626472 - 2626636
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt----nnnnnnncagg 152  Q
    |||||||||||| |||||||| | ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| |||           ||||    
T  2626472 tgaggggtaaccttggcgcaattggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaaaacagg 2626571  T
Q  153 gtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    |||||  ||| | |||||||||||||| ||||||||||||||  | |||||||||||| ||||||    
T  2626572 gtaagactgcgtacaatacaccaaatgatgggaccccttcccagaccctgcatatgcgggagctt 2626636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 8897940 - 8897783
Alignment:
Q  63 gtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttg 161  Q
    ||||||||||| ||||| ||||||||||||||||||||| | ||||||||||||| ||||||| |||||| || | |||         ||||||||| |     
T  8897940 gtaaccctggcacaactggtaaagttgttgtcatgtgacagcaaggtcacgggttgaagtcctggaaacaaccgcttgtgtaaaaaatagggtaaggcta 8897841  T
Q  162 catgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    | | |||||||||||||||||||||||||||||| | |||||||||||| ||||||||    
T  8897840 cgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagcttta 8897783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 81 - 218
Target Start/End: Complemental strand, 24365218 - 24365079
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaaggttgcatgcaatacaccaaat 178  Q
    ||||||||||||||||||||||  || |||||||||||||| |||||||||||||||  ||||       |||||||||| |||   |||||||||||||    
T  24365218 gtaaagttgttgtcatgtgactaaaatgtcacgggttcaagccctagaaacagcctcttgtgtaaaaaatcagggtaaggctgcgaacaatacaccaaat 24365119  T
Q  179 ggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    ||||||||||||||||| | ||||| |||| | |||||||    
T  24365118 ggtgggaccccttcccggaccctgcgtatgtgggagcttt 24365079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 28407382 - 28407449
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  28407382 tggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctc 28407449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 6760776 - 6760940
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||  |||||||||| |||||||||||||||| |||||  ||||||||||||||||||||| ||||||||||| |||        |||||||    
T  6760776 tgaggggtaact-tggcgcaactggtaaagttgttgtcatatgactagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 6760874  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| | | | ||||||||||  ||||||||||||||||| || | || ||||||||| ||||||||    
T  6760875 aggcttcgtacaatacaccaataatggtgggaccccttctcggaccccgcatatgcgggagcttta 6760940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 24245405 - 24245478
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaac 131  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  24245405 gaggggtaaccttggggcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaac 24245478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 73 - 219
Target Start/End: Original strand, 12625858 - 12626006
Alignment:
Q  73 cgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaaggttgcatgcaata 170  Q
    ||||||| |||||||||||||| |||||||   |||||||||| ||||||||| |||||| ||||  ||||       |||||||||  ||||| |||||    
T  12625858 cgcaactggtaaagttgttgtcgtgtgacttgtaggtcacgggctcaagtcctggaaacaacctcttgtgtaaaaaaacagggtaagactgcatacaata 12625957  T
Q  171 caccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||||| ||||| | ||||| |||||| ||||||||    
T  12625958 caccaaatggtgggaccccctcccggaccctgcgtatgcgggagcttta 12626006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 20284250 - 20284088
Alignment:
Q  62 ggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt---nnnnnnncagggtaagg 158  Q
    ||||||| || ||||||  ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||           |||||||||    
T  20284250 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaaaaaagggtaagg 20284151  T
Q  159 ttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
     ||| | ||||||||||  |||||||||||||||||||| | ||||| |||||| ||| ||||    
T  20284150 ctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagtttta 20284088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 21070879 - 21070804
Alignment:
Q  62 ggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||| || ||||||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  21070879 ggtaaccttgacgcaacgggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 21070804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 26954086 - 26954251
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggta 155  Q
    ||||||||||  ||||| || | |||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||  ||||       |||||||    
T  26954086 gaggggtaactttggcgtaattggtaaagttgttgtcatgtgattagaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaaacagggta 26954185  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||| | ||||||||||  |||||||||||||||||||  | |  ||||||||| ||||||||    
T  26954186 aggctgcgtacaatacaccaataatggtgggaccccttcccagacctcgcatatgcgggagcttta 26954251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 90 - 195
Target Start/End: Complemental strand, 23000365 - 23000262
Alignment:
Q  90 ttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggacccc 189  Q
    |||||||||||||| ||||||||||||  ||||||| ||||||||||| |||       || ||||||||| ||| ||||||||||||||||||||||||    
T  23000365 ttgtcatgtgactgaaaggtcacgggt--aagtcctggaaacagcctcttgtgtaaaaacacggtaaggttccatacaatacaccaaatggtgggacccc 23000268  T
Q  190 ttcccg 195  Q
    ||||||    
T  23000267 ttcccg 23000262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 25250475 - 25250640
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||| ||||||| |||| ||||| ||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||||  |||         ||||||    
T  25250475 tgagaggtaaccttggcacaactggtaaagttgttgtcatgtgactggaaggtcacatgttcaagtcctggaaacagcctattgtgtaaaaaatagggta 25250574  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
     || ||| | ||||||||||  |||||||||||||||||||||| || ||||||||| ||| ||||    
T  25250575 tggctgcgtacaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagattta 25250640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 136
Target Start/End: Complemental strand, 42083857 - 42083802
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcct 136  Q
    ||||| ||||||||| ||||||| ||||||||||||||||||||| ||||||||||    
T  42083857 gtaaaattgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcct 42083802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 11748254 - 11748332
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||  ||| |||||| || || ||||||||||||||||| || |||||||||||||||| | |||||||||||    
T  11748254 aggggtaactttggtgcaactggtgaaattgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctc 11748332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 29877140 - 29877206
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagc 215  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||    
T  29877140 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagc 29877206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 86 - 216
Target Start/End: Original strand, 31457155 - 31457285
Alignment:
Q  86 gttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtggga 185  Q
    |||||||||||||| ||| |||||||||||||||||||||  ||||| |||| |||        |||  |||| ||| | ||||||| |||||||| |||    
T  31457155 gttgttgtcatgtggctgaaaggtcacgggttcaagtcctgtaaacaacctcttgtgtaaaaataggaaaaggctgcgtacaatacatcaaatggtagga 31457254  T
Q  186 ccccttcccgaatcctgcatatgcgagagct 216  Q
    ||||||||| || ||||| |||||| |||||    
T  31457255 ccccttcccaaaccctgcgtatgcgggagct 31457285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 44781664 - 44781608
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||||| |||||| ||||    
T  44781664 gtaaagttgttgtcacgtgactgaaagttcacgggttcaagtcctggaaacaacctc 44781608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 19729386 - 19729453
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||||| ||  | |||||||||||||||||||||||||||||| | ||||||||| || |||||    
T  19729386 cagggtaaggctgtgtacaatacaccaaatggtgggaccccttcccggaccctgcatatacgggagct 19729453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 389691 - 389761
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||| | |||||||||||||| ||||| ||||| ||  | ||||| |||||||||||||||    
T  389691 cagggtaaggttgcgtacaatacaccaaatgatgggatccctttcctgaccctgcgtatgcgagagcttta 389761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 5689677 - 5689747
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||||||||| ||||||||||||| | ||| |||| | ||||||||    
T  5689677 cagggtaaggctgcgtacaatacaccaaatggtggaaccccttcccgaaccatgcgtatgtgggagcttta 5689747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 26102580 - 26102630
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||||||||||||||||||||||||| | ||||| |||||| |||||    
T  26102580 caatacaccaaatggtgggaccccttcccggaccctgcttatgcgggagct 26102630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Complemental strand, 30962929 - 30962875
Alignment:
Q  83 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||||||||| || |||||||||  |||||||||| |||||||||||    
T  30962929 aaagttgttgtcatgtgattgaaaggtcacgacttcaagtcctggaaacagcctc 30962875  T

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Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 35105902 - 35105956
Alignment:
Q  83 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||| ||| ||| ||||||||||||||||||||| |||||| ||||    
T  35105902 aaagttgttgtcacgtggctgaaaggtcacgggttcaagtcctggaaacaacctc 35105956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 5135361 - 5135309
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||||||||||||||||||||||||||||| | ||||| |||||  |||||||    
T  5135361 caatacaccaaatggtgggaccccttcccggaccctgcgtatgcaggagcttt 5135309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 22598134 - 22598190
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||||||  |||||| |||||||||||||||| |||| |||||| ||||    
T  22598134 gtaaagttgttgtcacatgactgaaaggtcacgggttcaaatcctggaaacaacctc 22598190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 23286475 - 23286431
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgac 101  Q
    |||||||||||| || ||||||| |||||||||||||||||||||    
T  23286475 tgaggggtaaccttgtcgcaactggtaaagttgttgtcatgtgac 23286431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 57 - 100
Target Start/End: Complemental strand, 40605087 - 40605044
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtga 100  Q
    |||||||||||  |||||||||| ||||||||||||||||||||    
T  40605087 tgaggggtaactttggcgcaactggtaaagttgttgtcatgtga 40605044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 11748373 - 11748407
Alignment:
Q  175 aaatggtgggaccccttcccgaatcctgcatatgc 209  Q
    ||||||| |||||||||||||||||||||||||||    
T  11748373 aaatggtaggaccccttcccgaatcctgcatatgc 11748407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 20869969 - 20870041
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||  ||||||||||||||||| | | || ||||||||| ||||||||    
T  20869969 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttccaggaccccgcatatgcgggagcttta 20870041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 178 - 219
Target Start/End: Original strand, 27507985 - 27508026
Alignment:
Q  178 tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||||||| ||||| |||||| ||||||||    
T  27507985 tggtgggaccccttcccgaaccctgcgtatgcgggagcttta 27508026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 95
Target Start/End: Original strand, 42840863 - 42840900
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtca 95  Q
    ||||||||||| |||||||||| |||||||||||||||    
T  42840863 gaggggtaaccttggcgcaactagtaaagttgttgtca 42840900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 11001021 - 11000985
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctg 202  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  11001021 caatacaccaaatggtgggacccctacccgaaccctg 11000985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 171 - 219
Target Start/End: Original strand, 28407471 - 28407519
Alignment:
Q  171 caccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||||||||||| | ||| | |||||| ||||||||    
T  28407471 caccaaatggtgggaccccttcccggaccctacgtatgcgggagcttta 28407519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 6e-47; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 5648212 - 5648372
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||       ||||||||    
T  5648212 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaa 5648311  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    || ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||||    
T  5648312 ggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagctt 5648372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 57 - 208
Target Start/End: Complemental strand, 5306845 - 5306694
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |||       ||||||||    
T  5306845 tgaggggtaaccttggcgcaactggtaaagttgatgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaatcagggtaa 5306746  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatg 208  Q
    |||||| | |||||||||||||||||||||||||||||| | ||||| ||||    
T  5306745 ggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatg 5306694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 6430807 - 6430645
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||| |||       ||||||||    
T  6430807 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcatggaaacagcctcttgtgtaaaaacagggtaa 6430708  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | |||||||||||||||||||||| ||||||| | ||||| |||||| ||||||||    
T  6430707 ggctgcgtacaatacaccaaatggtgggaccacttcccggaccctgcgtatgcgggagcttta 6430645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 56 - 219
Target Start/End: Original strand, 30639332 - 30639495
Alignment:
Q  56 ctgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggta 155  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||| |||||||| |||||||||||| ||||||| ||| |||       |||||||    
T  30639332 ctgaggggtaaccttggcgcaactggtaaagttgttgtcttgtgactgaaaggtcactggttcaagtcctggaaacagactcttgtgtaaaaacagggta 30639431  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||| | ||||||||||||||||| |||||||||||| | |||||||||||| ||||||||    
T  30639432 aggctgcgtacaatacaccaaatggtgagaccccttcccggaccctgcatatgcgggagcttta 30639495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 57 - 209
Target Start/End: Complemental strand, 48599005 - 48598854
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       ||||||||    
T  48599005 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacagggtaa 48598907  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgc 209  Q
    || ||| | |||||||||||||||||||||||||||||| | | |||||||||    
T  48598906 ggctgcgtacaatacaccaaatggtgggaccccttcccggaccatgcatatgc 48598854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 20224937 - 20225095
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||| |||       ||||||||    
T  20224937 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacaacctcttgt-gtaaaacagggtaa 20225035  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    || ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  20225036 ggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 20225095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 208
Target Start/End: Complemental strand, 47528709 - 47528560
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||       |||||||||    
T  47528709 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgt-gtaaaacagggtaag 47528611  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatg 208  Q
    | ||| | |||||||||||||||||||||||||||||| | |||| |||||    
T  47528610 gctgcgtacaatacaccaaatggtgggaccccttcccggaccctgaatatg 47528560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 16911519 - 16911680
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggt 159  Q
    |||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||        ||||||||||     
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctagaaacagcctcttgtgtacaaatcagggtaaggc 16911618  T
Q  160 tgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| | ||||||||||  |||||||||||||||||||| | ||||| || ||| ||||||||    
T  16911619 tgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtacgcgggagcttta 16911680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 81 - 217
Target Start/End: Original strand, 40915806 - 40915942
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||       || ||||||| ||| | |||||||||||||||    
T  40915806 gtaaagttgttgtcatgtgactataaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacaaggtaaggctgcgtacaatacaccaaatgg 40915905  T
Q  181 tgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    ||||| ||||||||| | ||||| |||||| ||||||    
T  40915906 tgggagcccttcccggaccctgcgtatgcgggagctt 40915942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 56 - 187
Target Start/End: Original strand, 14590789 - 14590922
Alignment:
Q  56 ctgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncaggg 153  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  || |       |||||    
T  14590789 ctgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacaggg 14590888  T
Q  154 taaggttgcatgcaatacaccaaatggtgggacc 187  Q
    ||||| ||||| ||||||| ||||||||||||||    
T  14590889 taaggctgcatacaatacatcaaatggtgggacc 14590922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 23501747 - 23501905
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||      |||||||| |||        ||||||||    
T  23501747 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtc------acagcctcttgtgtaaaaaacagggtaa 23501840  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||| | ||||||||||  |||||||||||||||||||| | |||||||||||| ||||||||    
T  23501841 ggttgcgtacaatacaccaataatggtgggaccccttcccggaccctgcatatgcgggagcttta 23501905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 11054327 - 11054170
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||  |||||| ||| |||       |||||||||    
T  11054327 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctgaaaacagtctcttgt-gtaaaacagggtaag 11054229  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
      ||| | ||||||||||||||| || ||||||||||| | |||||||||||| |||||    
T  11054228 actgcgtacaatacaccaaatggcggaaccccttcccggaccctgcatatgcgggagct 11054170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 8473789 - 8473639
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaat 169  Q
    |||||||||| |||||||||||||||| |||| | |||||  |||||||||||||| ||||||||||| |||       |||||||||| ||||| ||||    
T  8473789 tggcgcaactggtaaagttgttgtcatatgaccggaaggttgcgggttcaagtcctggaaacagcctcttgtgtttaa-cagggtaaggctgcatacaat 8473691  T
Q  170 acaccaaatggtgggaccccttccc--gaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||||||||||||  ||  |||||||||||| ||||||||    
T  8473690 acaccaaatggtgggaccccttccccggacccctgcatatgcgggagcttta 8473639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 65 - 219
Target Start/End: Complemental strand, 16408777 - 16408620
Alignment:
Q  65 aaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgca 163  Q
    |||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||||  |||     
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaagactgcg 16408678  T
Q  164 tgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    | ||||||||||  |||||||| ||||||||||| | || ||||||||| ||||||||    
T  16408677 tacaatacaccaataatggtggaaccccttcccggaccccgcatatgcgggagcttta 16408620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 191
Target Start/End: Original strand, 37494805 - 37494939
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| ||| |||||| |||||||||||| |||| ||||| |||||||| |||||||||||| |||||| |||| |||        ||||||||    
T  37494805 gaggggtaaccttggtgcaactggtaaagttgttgccatgcgactgaaaggtcacaggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaa 37494904  T
Q  157 ggttgcatgcaatacaccaaatggtgggacccctt 191  Q
    |||||||| ||||| ||||||||||||||||||||    
T  37494905 ggttgcatacaatataccaaatggtgggacccctt 37494939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 21646918 - 21647082
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||         |||||||    
T  21646918 gagggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaaatagggtaa 21647017  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | ||||| ||||  |||||||||||||||||||  | || ||||||||| ||||||||    
T  21647018 ggctgcgtacaatataccaataatggtgggaccccttcccagaccccgcatatgcgggagcttta 21647082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 84 - 219
Target Start/End: Complemental strand, 17043549 - 17043413
Alignment:
Q  84 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn-cagggtaaggttgcatgcaatacaccaaatggtg 182  Q
    |||||||||||| ||||||| |||||||| |||||||||||| ||||||||||| |||        |||||||||| ||| | |||||||||||||||||    
T  17043549 aagttgttgtcaagtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaatacagggtaaggctgcgtacaatacaccaaatggtg 17043450  T
Q  183 ggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||  | |||||||||||  ||||||||    
T  17043449 ggaccccttcccagaccctgcatatgctggagcttta 17043413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 14983791 - 14983950
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnnc-agggtaaggt 159  Q
    |||||||| ||||  |||| |||||||||||||||| ||| || |||||||||| |||||||| | ||||||||||| |||         ||||||||||    
T  14983791 gggtaaccttggcagaactggtaaagttgttgtcatatgattggaaggtcacggattcaagtctttgaaacagcctcttgtgtaaaaaatagggtaaggt 14983890  T
Q  160 tgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| | |||||||| ||||||||||||||||||||| | ||||| |||||| ||||||||    
T  14983891 tgcctacaatacactaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 14983950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 82 - 209
Target Start/End: Complemental strand, 9832468 - 9832342
Alignment:
Q  82 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggt 181  Q
    |||| ||||||| || |||||| |||||||||||||||||||||  |||||||||| |||       |||||||||| ||| | ||||||||||||||||    
T  9832468 taaaattgttgtgatctgactgaaaggtcacgggttcaagtcctgaaaacagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggt 9832370  T
Q  182 gggaccccttcccgaatcctgcatatgc 209  Q
    |||||||||||||| | |||||||||||    
T  9832369 gggaccccttcccggaccctgcatatgc 9832342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 90 - 218
Target Start/End: Original strand, 25463108 - 25463237
Alignment:
Q  90 ttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn-cagggtaaggttgcatgcaatacaccaaatggtgggaccc 188  Q
    |||||||||||||| ||||||||||||||||||||| |||||| |||| |||        | ||| |||||||| | ||| |||||||||||||||||||    
T  25463108 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaactgggaaaggttgcgtacaacacaccaaatggtgggaccc 25463207  T
Q  189 cttcccgaatcctgcatatgcgagagcttt 218  Q
    ||||||| | |||||||||||| |||||||    
T  25463208 cttcccggaccctgcatatgcgggagcttt 25463237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 96 - 216
Target Start/End: Complemental strand, 29208039 - 29207920
Alignment:
Q  96 tgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccg 195  Q
    |||||||| ||||||||||||||||||||| ||||  ||||| |||       |||||||||| ||| | ||||||||||||||||||||||||||||||    
T  29208039 tgtgactgaaaggtcacgggttcaagtcctggaaattgcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 29207941  T
Q  196 aatcctgcatatgcgagagct 216  Q
     | |||||||||||| |||||    
T  29207940 gaccctgcatatgcgggagct 29207920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 85 - 216
Target Start/End: Complemental strand, 39077948 - 39077818
Alignment:
Q  85 agttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtggg 184  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||||||||| |||       |||||||||||||| | ||||| ||||||||||| |    
T  39077948 agttgttgtcatgtgattgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacagggtaaggttgcgtacaatataccaaatggtgag 39077850  T
Q  185 accccttcccgaatcctgcatatgcgagagct 216  Q
    ||  ||| ||| | |||||||||||| |||||    
T  39077849 acatctttccggaccctgcatatgcgggagct 39077818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 219
Target Start/End: Original strand, 54175043 - 54175181
Alignment:
Q  84 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctag-aaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacacc-aaatggt 181  Q
    |||||||||||||||||||| || ||||||| |||||||||| | |||||||||| |||       |||||||||| ||| | ||||||||| |||||||    
T  54175043 aagttgttgtcatgtgactgaaatgtcacggattcaagtcctggaaaacagcctcttgtgtaaaaacagggtaaggctgcgtacaatacaccaaaatggt 54175142  T
Q  182 gggacccctt-cccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| |||| | |||||||||||| ||||||||    
T  54175143 gggaccccttccccggaccctgcatatgcgggagcttta 54175181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 87 - 195
Target Start/End: Complemental strand, 7385628 - 7385519
Alignment:
Q  87 ttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatggtggga 185  Q
    ||||||||||||||||| ||||||||||||||||| ||| ||||||||||| |||         ||||||||||||  ||||||||||||||||||||||    
T  7385628 ttgttgtcatgtgactgaaaggtcacgggttcaagccctggaaacagcctcatgtgtaaaaaatagggtaaggttgtgtgcaatacaccaaatggtggga 7385529  T
Q  186 ccccttcccg 195  Q
    ||| ||||||    
T  7385528 ccctttcccg 7385519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 61 - 137
Target Start/End: Complemental strand, 17315476 - 17315400
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||| |||||||||  ||||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgggttcaattcctcgaaacaacctc 17315400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 20405047 - 20405205
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggta 155  Q
    ||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||||       |||||||||||||||  ||||       |||||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgactggaaggtcacggg-------cctagaaacagcctcttgtgtaaaaaaacagggta 20405139  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || |||| | |||||||| |  |||||||||||||||||||| | || ||||||||| ||||||||    
T  20405140 agattgcgtacaatacactaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 20405205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 10660358 - 10660437
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||  ||||||||||| |||||| ||||    
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctc 10660437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 10874503 - 10874582
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||| ||  ||||||||||| |||||| ||||    
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggttacatgttcaagtcctggaaacaacctc 10874582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 59 - 218
Target Start/End: Original strand, 54966977 - 54967135
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn-cagggtaag 157  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||| ||||||||  |||||||| || |||| | |||| |||        |||||||||    
T  54966977 agggggaaccttggcgcaacg-gtaaagttgttgtcatgtgactgaaaggtcacatgttcaagttctggaaagaacctcttgtgtaaaaaacagggtaag 54967075  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    ||||| | ||||| |||||||||||||||||||||||| | ||| |||||||| |||||||    
T  54967076 gttgc-tacaatataccaaatggtgggaccccttcccgtaccctacatatgcgggagcttt 54967135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 35567147 - 35567286
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    |||||||||||||||||| |||| ||||||| ||||||||||| | ||||||||| | |||        |||||||||| ||  | ||| ||||||||||    
T  35567147 gtaaagttgttgtcatgtaactgaaaggtcatgggttcaagtcttggaaacagccacttgtgtaaaaaacagggtaaggctgtgtacaacacaccaaatg 35567246  T
Q  180 gtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||||| ||||| | |||| ||||||||    
T  35567247 gtgggaccccttcccgaaccctgcgtctgcgggagcttta 35567286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 83 - 219
Target Start/End: Complemental strand, 49938746 - 49938612
Alignment:
Q  83 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacacc-aaatggt 181  Q
    ||||||||||||| ||||||| |||||||| |||||||||||| ||||||||||| |||       | |||||||||    | ||||||||| |||||||    
T  49938746 aaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacggggtaaggt---gtacaatacaccaaaatggt 49938650  T
Q  182 gggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||  | |||||||||||| ||||||||    
T  49938649 gggaccccttcccataccctgcatatgcgggagcttta 49938612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 7909370 - 7909309
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcg 210  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||| ||||| ||||||    
T  7909370 cagggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcg 7909309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 44363290 - 44363149
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacacc--aaa 177  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||  ||||||||||||||        ||||||| || ||| | |||  ||||  |||    
T  44363290 gtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctgaaaacagcctcgtgtgtaaaaaacagggtagggctgcgtacaacgcaccaaaaa 44363191  T
Q  178 tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||||| | ||||| |||||| ||||||||    
T  44363190 tggtgggaccccttcccggaccctgcgtatgcgggagcttta 44363149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 55766647 - 55766485
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcac-gggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    ||||||||||| || ||||||| ||||||||||||||||||||| | |||||||| ||||||||||  | |||||||  || |||       ||||||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccggaaggtcacggggttcaagttttggaaacagtttcttgtgtgtaaacagggtaa 55766548  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | ||||||||  |||||||| ||||| ||||| | | ||| |||||||||||||||    
T  55766547 ggctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgcgagagcttta 55766485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 70 - 195
Target Start/End: Complemental strand, 30496489 - 30496365
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaat 169  Q
    ||||||||||   ||||||||||||| ||||||| ||||||||| ||||||||| | ||||||||||| |||       | |||||||| ||||| ||||    
T  30496489 tggcgcaactgtaaaagttgttgtcacgtgactgaaaggtcacgtgttcaagtcatggaaacagcctcttgtgtaaacac-gggtaaggctgcatacaat 30496391  T
Q  170 acaccaaatggtgggaccccttcccg 195  Q
    ||||||||||| ||||| ||||||||    
T  30496390 acaccaaatggggggactccttcccg 30496365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 47443958 - 47444063
Alignment:
Q  105 aaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn-cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgc 203  Q
    ||||||||||||||||||||| ||||||||||| ||         |||||||||| ||| | |||||||||||||||||||||||||||||| | |||||    
T  47443958 aaggtcacgggttcaagtcctggaaacagcctcttgcgtaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgc 47444057  T
Q  204 atatgc 209  Q
    ||||||    
T  47444058 atatgc 47444063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 54730226 - 54730282
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  54730226 gtaaagttgttgtcatgtgaccaaaaggtcacgggttcaagtcctagaaacagcctc 54730282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 58 - 125
Target Start/End: Complemental strand, 13256578 - 13256511
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcct 125  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||| |||||||  ||||||||||||    
T  13256578 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcataggttcaagtcct 13256511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 30690340 - 30690195
Alignment:
Q  82 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn--------cagggtaaggttgcatgcaatacac 173  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||| |||| |||||| |||               |||||||||| ||||| ||||||||    
T  30690340 taaagtggttgtcaagtgactgaaaggtcacgggttcaagtcctggaaaaagcctcttgtgtaaaaaataaaaaacagggtaaggctgcatacaatacac 30690241  T
Q  174 caaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| |||||||||||||||||| | ||||| |||||| ||||||||    
T  30690240 caattggtgggaccccttcccggaccctgcgtatgcgggagcttta 30690195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 30352767 - 30352693
Alignment:
Q  63 gtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||| |||||||||| ||||||||||||||| ||||| | |||||||||||||  |||||| |||||||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtcaagtgaccgaaaggtcacgggttagagtcctggaaacagcctc 30352693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 41018945 - 41018838
Alignment:
Q  87 ttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggac 186  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||| |||| |||        ||||||||| | | | ||||||||||||| |||||||    
T  41018945 ttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaattagggtaaggctacgtacaatacaccaaatagtgggac 41018846  T
Q  187 cccttccc 194  Q
    ||||||||    
T  41018845 cccttccc 41018838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 61 - 134
Target Start/End: Complemental strand, 5313172 - 5313099
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagc 134  Q
    |||||||| ||||| |||| |||||||||||||||||||| || |||||||||||||||| ||||  |||||||    
T  5313172 gggtaaccttggcgtaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaattcctgaaaacagc 5313099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 152 - 217
Target Start/End: Original strand, 49796846 - 49796911
Alignment:
Q  152 ggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||| ||||| |||||| ||||||    
T  49796846 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagctt 49796911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 55830902 - 55830740
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgg-gttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    ||||||||||| || ||||||| ||||||||||||||||||||  | |||||||||| ||||||||  | ||||||| ||| |||       ||||||||    
T  55830902 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtgatcggaaggtcacggagttcaagttttggaaacagtctcttgtgtgtaaacagggtaa 55830803  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
     | ||| | ||||||||  |||||||| ||||| ||||| | | ||| |||||||||||||||    
T  55830802 tgctgcgtacaatacactgaatggtggaaccccatcccggaccttgcgtatgcgagagcttta 55830740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 487293 - 487237
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  487293 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctc 487237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 23580365 - 23580310
Alignment:
Q  82 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||||||| ||||||    
T  23580365 taaagttgttgtcacgtgactgaaaggtcacgggttcaagttctagaaagagcctc 23580310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 218
Target Start/End: Complemental strand, 32478942 - 32478811
Alignment:
Q  82 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggt 181  Q
    |||||||||||||||||||| |  ||||||| |||||||||||| |||||| ||||  ||       |||||||||| ||     |||||||||||||||    
T  32478942 taaagttgttgtcatgtgaccgagaggtcacaggttcaagtcctggaaacaacctctagtgtaaaaacagggtaaggctg-----aatacaccaaatggt 32478848  T
Q  182 gggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||||||||||||| | || || |||||| |||||||    
T  32478847 gggaccccttcccggacccagcgtatgcgggagcttt 32478811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 9987922 - 9987852
Alignment:
Q  150 agggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||   | | |||||||||| |||||||||    
T  9987922 agggtaaggctgcatacaatacaccaaatggtgggaccccttccttgaccttgcatatgcgggagctttaa 9987852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 85 - 191
Target Start/End: Original strand, 19027829 - 19027936
Alignment:
Q  85 agttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatggtgg 183  Q
    ||||||||||| ||||||| ||||||||||||||||||||| |||||| | || |||        |||||||||| ||| | ||||||||||| ||||||    
T  19027829 agttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacatcttgtgtaaaaaacagggtaaggctgcgtacaatacaccaattggtgg 19027928  T
Q  184 gacccctt 191  Q
    ||||||||    
T  19027929 gacccctt 19027936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 195
Target Start/End: Complemental strand, 47441688 - 47441573
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||| |||||||| ||| | |        |||||||||| ||  | ||||||||||||||    
T  47441688 gtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtccaagaaacagtctcttttgtaaaaatcagggtaaggctgtgtacaatacaccaaatg 47441589  T
Q  180 gtgggaccccttcccg 195  Q
    || |||||||||||||    
T  47441588 gttggaccccttcccg 47441573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 12257751 - 12257698
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagc 134  Q
    ||||||||||||||| |||| || |||||||||||||||| |||||||||||||    
T  12257751 gtaaagttgttgtcacgtgattgaaaggtcacgggttcaaatcctagaaacagc 12257698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 25629112 - 25629165
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||||||||||||||||| | ||| |||||||| ||||||||    
T  25629112 caatacaccaaatggtgggaccccttcccggaccctacatatgcgggagcttta 25629165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 167 - 216
Target Start/End: Original strand, 38786673 - 38786722
Alignment:
Q  167 aatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    ||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  38786673 aatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 38786722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 20908723 - 20908655
Alignment:
Q  152 ggtaaggttgcatgcaatacaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||| ||| | |||||||||||| |||||||||||||||||||| ||||| |||||| ||||||||    
T  20908723 ggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttta 20908655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 32629418 - 32629370
Alignment:
Q  89 gttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| |||||||||||||||| |||| |||||||||||    
T  32629418 gttgtcatgtgactgaaaggtcacgggttcaaatcctcgaaacagcctc 32629370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 42164306 - 42164250
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  42164306 gtaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacaacctc 42164250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 43035225 - 43035281
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||  |||||| ||||    
T  43035225 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtccaggaaacaacctc 43035281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 20639748 - 20639677
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||| |||||||||||||||||| | ||||| |||||| ||||||||    
T  20639748 cagggtaaggctgcgtacaatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 20639677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 219
Target Start/End: Complemental strand, 51865124 - 51865057
Alignment:
Q  152 ggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||| ||| | ||||||||||||||||||| |||||||||| | ||||| |||||| ||||||||    
T  51865124 ggtaaggctgcgtacaatacaccaaatggtggggccccttcccggaccctgcgtatgcgggagcttta 51865057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 50856394 - 50856344
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaac 131  Q
    |||||||||||||||  ||| || |||||||||||||||||||||||||||    
T  50856394 gtaaagttgttgtcacatgattgaaaggtcacgggttcaagtcctagaaac 50856344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 20225120 - 20225192
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||  ||||||||||||||||||| | || ||||||||| ||||||||    
T  20225120 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 20225192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 101
Target Start/End: Original strand, 18969698 - 18969738
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgac 101  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  18969698 gggtaaccttggcgcaactggtaaagttgttgtcatgtgac 18969738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 54640497 - 54640441
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||| ||||||||| ||| ||| ||||||||||||||||||| | |||||||||||    
T  54640497 gtaaaattgttgtcacgtggctgaaaggtcacgggttcaagtcttggaaacagcctc 54640441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 21489160 - 21489203
Alignment:
Q  175 aaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    ||||||||||||||||||||||| ||||| |||||| |||||||    
T  21489160 aaatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 21489203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 3580914 - 3580860
Alignment:
Q  164 tgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||||||||||||||| | ||||||||||||| | |||||||||| | |||||||    
T  3580914 tgcaatacaccaaatgctaggaccccttcccggaccctgcatatgtgggagcttt 3580860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 3580994 - 3580952
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 123  Q
    ||||||||||||||||||||||| || |||||| |||||||||    
T  3580994 gtaaagttgttgtcatgtgactgaaaagtcacgagttcaagtc 3580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 28494222 - 28494264
Alignment:
Q  174 caaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||||||||||||||||  |||||||||||||| |||||    
T  28494222 caaatggtgggaccccttcccagatcctgcatatgcgggagct 28494264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 32484307 - 32484349
Alignment:
Q  177 atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||||| | |||||||||||| ||||||||    
T  32484307 atggtgggaccccttcccggaccctgcatatgcgggagcttta 32484349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 13256490 - 13256418
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||  || |||||||||||||||||| || |||| |||| ||||||||    
T  13256490 cagggtaaggctgcgtacaatacaccaataatagtgggaccccttcccgaaccccgcatctgcgggagcttta 13256418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 208
Target Start/End: Complemental strand, 30581624 - 30581495
Alignment:
Q  82 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaaggttgcatgcaatacaccaaa-t 178  Q
    ||||||||||||||  | |||  ||||||| ||||||||||| | |||||| ||||  ||||       |||||||||| ||  | |||||||||||| |    
T  30581624 taaagttgttgtcacatcactaaaaggtcaagggttcaagtcgtggaaacaacctcttgtgtaaaaaaacagggtaagggtgtgtacaatacaccaaaat 30581525  T
Q  179 ggtgggaccccttcccgaatcctgcatatg 208  Q
    ||||||||||||||||| | ||||||||||    
T  30581524 ggtgggaccccttcccggaccctgcatatg 30581495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 33836561 - 33836506
Alignment:
Q  166 caatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||  ||||||||||||||||||| | ||||| |||||| ||||||||    
T  33836561 caatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttta 33836506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 5e-44; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 58 - 217
Target Start/End: Complemental strand, 32632737 - 32632578
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||| |||       |||||||||    
T  32632737 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaag 32632638  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    | ||| | ||||||||||||||||||||||||||||| || |||||||||||| ||||||    
T  32632637 gctgcgtacaatacaccaaatggtgggaccccttcccaaaccctgcatatgcgggagctt 32632578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 55 - 216
Target Start/End: Complemental strand, 34725280 - 34725120
Alignment:
Q  55 actgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggt 154  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       ||||||    
T  34725280 actgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacagggt 34725182  T
Q  155 aaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||| ||| | |||||||| ||||||||||||||||||||| | |||||||||||| |||||    
T  34725181 aaggctgcgtacaatacactaaatggtgggaccccttcccggaccctgcatatgcgggagct 34725120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 38478461 - 38478304
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||       |||||||||    
T  38478461 gaggggtaaccttggcgcaactagtaaacttgttgtcatgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt-gtaaaacagggtaag 38478363  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | ||| | |||||||||||||||||| |||||||| || | |||||||||||| |||||    
T  38478362 gctgcgtacaatacaccaaatggtggaaccccttctcggaccctgcatatgcgggagct 38478304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 47214488 - 47214645
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||  |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||       |||||||||    
T  47214488 gaggggtaactttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagtctcttgt-ttaaaacagggtaag 47214586  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    ||||| | |||||||||||||||||||||||||||||  | |||||||||||| |||||    
T  47214587 gttgcgtacaatacaccaaatggtgggaccccttcccagaccctgcatatgcgggagct 47214645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 14617014 - 14617177
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| |||        || ||||    
T  14617014 tgaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacagcctcttgtgtaaataacaaggta 14617113  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||| | |||||||||||||||||||| ||||||||| | |||||||||||| ||||||||    
T  14617114 aggttgcgtacaatacaccaaatggtgggatcccttcccggaccctgcatatgcgggagcttta 14617177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 45812716 - 45812559
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| ||||||||||  |||||||||||||||||||||| |||||||| ||||||||||||  |||||| ||| |||        ||||||||    
T  45812716 gaggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctgaaaacagtctcttgtgtaaaag-agggtaag 45812618  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | ||||| ||||||||||||||||||||||||||||| || |||||||||||| |||||    
T  45812617 gctgcatacaatacaccaaatggtgggaccccttcccaaaccctgcatatgcgggagct 45812559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 64 - 219
Target Start/End: Complemental strand, 30395903 - 30395745
Alignment:
Q  64 taaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgc 162  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||        |||||||||| |||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgtgactttaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgc 30395804  T
Q  163 atgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
     | ||||||||||  |||||||||||||||||||| | || ||||||||| ||||||||    
T  30395803 gtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 30395745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 46248134 - 46247972
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||| ||||| ||||||||||||||||||||||| || |||||||||||||||| | ||||||||||| |||        ||||||||    
T  46248134 gaggggtaaccttggctcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaa 46248035  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |  ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  46248034 gactgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 46247972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 58 - 193
Target Start/End: Complemental strand, 22930248 - 22930114
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||  |||       |||||||||    
T  22930248 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagccttttgtgtaaaaacagggtaag 22930149  T
Q  158 gttgcatg-caatacaccaaatggtgggaccccttcc 193  Q
    ||||  || ||||||||||||||||||||||||||||    
T  22930148 gttg--tgacaatacaccaaatggtgggaccccttcc 22930114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 58 - 218
Target Start/End: Original strand, 18944620 - 18944783
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||| ||||||||||| |||        ||||||||    
T  18944620 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaaggcctggaaacagcctcttgtgtaaaaaacagggtaa 18944719  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    || ||| | ||||||||||  |||||||||||||||||||| | ||||| |||||| |||||||    
T  18944720 ggctgcgtacaatacaccaacaatggtgggaccccttcccggaccctgcgtatgcgggagcttt 18944783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 46991781 - 46991943
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||| |||        ||||||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaa 46991880  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||  | ||||||||| |||||||||||||||||||| | ||||| |||| | ||||||||    
T  46991881 ggctgtgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgtgggagcttta 46991943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 216
Target Start/End: Original strand, 19414420 - 19414573
Alignment:
Q  62 ggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttg 161  Q
    ||||||| ||||| || | |||||||||||||||| |||||| |||||||||||||||||||||||||| |||||| | |       |||| ||||| ||    
T  19414420 ggtaaccttggcgtaattggtaaagttgttgtcatatgactgaaaggtcacgggttcaagtcctagaaagagcctcttat-gtaaaacaggttaaggctg 19414518  T
Q  162 catgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  19414519 cgtacaatacaccaaatggtgggaccccttcccgtaccctgcatatgcgggagct 19414573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 64 - 216
Target Start/End: Complemental strand, 12127010 - 12126859
Alignment:
Q  64 taaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgca 163  Q
    ||||| ||||||||||||||||||||||||||||| | || ||||||||||||| |||| || |||||||| || |||       |||||||||| |||     
T  12127010 taaccttggcgcaactcgtaaagttgttgtcatgtaattgaaaggtcacgggtttaagttctggaaacagcttcttgt-gtaaaacagggtaaggctgcg 12126912  T
Q  164 tgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | ||||||||||||| |||||||||||||||| | |||||||||||| |||||    
T  12126911 tacaatacaccaaattgtgggaccccttcccggaccctgcatatgcgggagct 12126859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 73 - 219
Target Start/End: Complemental strand, 23768486 - 23768339
Alignment:
Q  73 cgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatac 171  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||| | ||||||||||| |||        |||||||||| ||| | ||||||    
T  23768486 cgcaactggtaaagttgttgtcatgtgactgtaaggtcacaggttcaagtcatggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaatac 23768387  T
Q  172 accaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||| |||||||  | ||||| |||||| ||||||||    
T  23768386 accaaatggtgggacaccttcccagaccctgcgtatgcgggagcttta 23768339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 20004273 - 20004109
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagc--ctcgtgtnnnnnnncagggta 155  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||  |||||||       || ||||    
T  20004273 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctctcgtgt-aaaaaacaaggta 20004175  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||| | ||||||||||  |||||||||||||||||||  | || ||||||||| ||||||||    
T  20004174 aggctgcgtacaatacaccaataatggtgggaccccttcccagaccccgcatatgcgggagcttta 20004109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 41319988 - 41319834
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| || | ||||| ||||||||||||||||||||||| |||||||| |||| ||||||| ||||||| ||| |||        |||||||    
T  41319988 tgaggggtaaccttgacacaactggtaaagttgttgtcatgtgactgaaaggtcacaggtttaagtcctggaaacagtctcttgtgtaaaaaacagggta 41319889  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcg 210  Q
    ||| ||| | |||||||||||||| ||||||||||||||||| ||| ||||||||    
T  41319888 aggctgcgtacaatacaccaaatgatgggaccccttcccgaacccttcatatgcg 41319834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 10668197 - 10668366
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtc-----atgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncag 151  Q
    ||||||||||| |||||||||| ||||||||||||||     ||||||||| ||||||||||||||||||||| ||||||||||| |||        ||     
T  10668197 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaa 10668296  T
Q  152 ggtaaggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||| | ||||||||||  ||||||||||||||||||||   ||||| |||||| ||||||||    
T  10668297 ggtaaggttgcgtacaatacaccaataatggtgggaccccttcccggtccctgcgtatgcgggagcttta 10668366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 81 - 218
Target Start/End: Complemental strand, 18724703 - 18724565
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||||| ||  | |||||||||||||     
T  18724703 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgtgtacaatacaccaaatc 18724604  T
Q  180 gtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
     ||||||||||||||| | ||| |||||||| |||||||    
T  18724603 ttgggaccccttcccggaccctacatatgcgggagcttt 18724565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 27201623 - 27201788
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| | ||| || | ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||        |||||||    
T  27201623 tgaggggtaaccttagcgtaaatggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtcagaaacagggta 27201722  T
Q  156 aggttgcatgcaatacacc--aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||| | |||||||||  ||||||||||||||||||||| | | ||| |||||| ||||||||    
T  27201723 aggctgcgtacaatacaccaaaaatggtgggaccccttcccggaccttgcgtatgcgggagcttta 27201788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 27474257 - 27474419
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| | || ||||| ||||||||||||||||||||||| |||||||| |||||||||| | ||||||| ||| |||       ||||| ||    
T  27474257 tgaggggtaaccttagctcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcttggaaacagtctcttgtgtaaaaacagggcaa 27474356  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
     | ||| | ||||||||  |||||||||||||||||||| | ||||| |||||| ||||||||    
T  27474357 agctgcgtacaatacactgaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 27474419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 81 - 218
Target Start/End: Original strand, 11596513 - 11596650
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||||| | ||||||||||||| || ||||||||||||||||||||||||| |||| |||       |||||||||| ||| |  ||||||||||||||    
T  11596513 gtaaagtggctgtcatgtgactgaaatgtcacgggttcaagtcctagaaacaacctcttgtgtaaaaacagggtaaggctgcgtataatacaccaaatgg 11596612  T
Q  181 tgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    ||||||||||||| | | ||||| |||||| |||||||    
T  11596613 tgggaccccttcctggaccctgcgtatgcgggagcttt 11596650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 216
Target Start/End: Complemental strand, 35253329 - 35253209
Alignment:
Q  95 atgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccccttccc 194  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||| |||       |||||||||| ||| | |||||||||||||||||||||||||||||    
T  35253329 atgtgactgaaagatcacgggttcaagtcctcgaaacagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggaccccttccc 35253231  T
Q  195 gaatcctgcatatgcgagagct 216  Q
    | | |||||||||||| |||||    
T  35253230 ggaccctgcatatgcgggagct 35253209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 45402077 - 45402235
Alignment:
Q  63 gtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggt--aaggt- 159  Q
    |||||| |||||||||| |||||||||||||||||||| || ||||| ||||||||||||||| ||||||||||| |||       ||||||  ||| |     
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgtga-tggaaggtaacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggttcaagttc 45402175  T
Q  160 tgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| | |||||||||||||||||||||||||||||  | ||||| |||||| ||||||||    
T  45402176 tgcgtacaatacaccaaatggtgggaccccttcccagaccctgcgtatgcgggagcttta 45402235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 133
Target Start/End: Original strand, 34714599 - 34714675
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag 133  Q
    |||||||||||| |||||||||| |||||||||||||||||||| || ||||||||||||||||||| | |||||||    
T  34714599 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgattgaaaggtcacgggttcaagtcatggaaacag 34714675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 6925100 - 6925239
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||         ||||||||| |||   ||||||||| ||||    
T  6925100 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaatagggtaaggctgcggacaatacaccgaatg 6925199  T
Q  180 gtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||   ||||| |||||| ||||||||    
T  6925200 gtgggaccccttcccggtccctgcgtatgcgggagcttta 6925239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 81 - 209
Target Start/End: Original strand, 20036220 - 20036350
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaaggttgcatgcaatacaccaaat 178  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||  |||  ||||        |||||||| |||| | |||||||||||||    
T  20036220 gtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaaactcttgtgtaaagagaaagggtaagattgcgttcaatacaccaaat 20036319  T
Q  179 ggtgggaccccttcccgaatcctgcatatgc 209  Q
    ||||| ||||||||||| | ||||| |||||    
T  20036320 ggtggaaccccttcccggaccctgcgtatgc 20036350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 8197014 - 8197087
Alignment:
Q  52 gttactgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcct 125  Q
    |||| |||||||||||| ||| |||||| || |||||||||||||||||||| |||||||||||||||||||||    
T  8197014 gttagtgaggggtaaccttggtgcaactggtcaagttgttgtcatgtgactgaaaggtcacgggttcaagtcct 8197087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 60 - 125
Target Start/End: Original strand, 40424721 - 40424786
Alignment:
Q  60 ggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcct 125  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggccacgggttcaagtcct 40424786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 81 - 191
Target Start/End: Complemental strand, 6983967 - 6983858
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||| ||||||||||||| |       |||||||||  ||| | |||||||||||||||    
T  6983967 gtaaagttgttgtcacgtgactgaaaggtcacaggttcaagtcctggaaacagcctcgtat-aaaaaacagggtaagtatgcgtacaatacaccaaatgg 6983869  T
Q  181 tgggacccctt 191  Q
    |||||||||||    
T  6983868 tgggacccctt 6983858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 216
Target Start/End: Complemental strand, 25468421 - 25468285
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    |||||||||||||||||||| || ||||||| ||||||||||||| |||||| |||| |||        |||||||||||||| | ||||||||||||||    
T  25468421 gtaaagttgttgtcatgtgattgaaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaatcagggtaaggttgcgtacaatacaccaaatg 25468322  T
Q  180 gtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    || ||||| ||||||  | ||||| |||||| |||||    
T  25468321 gttggacctcttcccagaccctgcgtatgcgggagct 25468285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 189
Target Start/End: Original strand, 33222973 - 33223093
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaat 169  Q
    |||||||||  ||||||||||||||||||||||| |||||||||| || ||||| | ||||||||||| |||       ||||| |||||||| | ||||    
T  33222973 tggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcacggatttaagtcatggaaacagcctcttgtgtaaaaacagggaaaggttgcgtacaat 33223072  T
Q  170 acacc-aaatggtgggacccc 189  Q
    ||||| |||||||||||||||    
T  33223073 acaccaaaatggtgggacccc 33223093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 19932934 - 19932869
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagt 122  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||    
T  19932934 tgaggggttaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagt 19932869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 2435945 - 2435889
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||    
T  2435945 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 2435889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 83 - 219
Target Start/End: Original strand, 9939463 - 9939603
Alignment:
Q  83 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtg-tnnnnnnncagggtaaggttgcatgcaatacacc--aaatg 179  Q
    ||||||||||||||||||||| ||||||||| ||||||||||| |||||| |||| || |       || ||||||||||| |||||||||||  |||||    
T  9939463 aaagttgttgtcatgtgactgaaaggtcacgagttcaagtcctggaaacaacctcttgtttaagaaacatggtaaggttgcgtgcaatacaccaaaaatg 9939562  T
Q  180 gtggga-ccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||| ||||||| || | ||||| |||||| ||||||||    
T  9939563 gtgggacccccttctcggaccctgcgtatgcgggagcttta 9939603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 25290143 - 25290214
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 132  Q
    |||||||| |||||||||  ||||||||||||||||||||||| ||||||||| ||||||||| | ||||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcttggaaaca 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 4349707 - 4349777
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  4349707 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 4349777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 219
Target Start/End: Complemental strand, 18742137 - 18741976
Alignment:
Q  63 gtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcct-agaaacagcc--tcgtgtnnnnnnncagggtaaggt 159  Q
    |||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||| || |  ||||||| |  | || |       ||||||||||     
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaagggttcaaatcttgggaaacagtcttttgtataaaaaaacagggtaaggc 18742038  T
Q  160 tgcatgcaatacacc--aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| | |||||||||  ||||||||||||||||||||  | ||||| |||||||||||||||    
T  18742037 tgcgtacaatacaccaaaaatggtgggaccccttcccagaccctgcgtatgcgagagcttta 18741976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 218
Target Start/End: Complemental strand, 44485291 - 44485129
Alignment:
Q  56 ctgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn-cagggt 154  Q
    |||||||| | || |||||||||  |||||||||||||||||||| || |||||||||||||  |||||| |||||| || | |||        || |||    
T  44485291 ctgagggggagccttggcgcaaca-gtaaagttgttgtcatgtgattgaaaggtcacgggttatagtcctggaaacaaccacttgtgtaaaagacatggt 44485193  T
Q  155 aaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||| ||| | |||||||||||||||| ||||||||||||| ||||| | |||||| |||||||    
T  44485192 aaggctgcgtacaatacaccaaatggttggaccccttcccggatcctacgtatgcgggagcttt 44485129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 15505633 - 15505702
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||||||||  ||| | |||||||||||||||||||||||||||||||| ||||| |||||| |||||||    
T  15505633 cagggtaagactgcgtacaatacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttt 15505702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 2436051 - 2435995
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||    
T  2436051 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacaacctc 2435995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 17470504 - 17470448
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| ||||||| | ||||| |||||||||||||||||||||||||    
T  17470504 gtaaagttgttgtcacgtgactgaatggtcatgggttcaagtcctagaaacagcctc 17470448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 35117926 - 35117870
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| |||| ||||||    
T  35117926 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaatagcctc 35117870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 150 - 197
Target Start/End: Complemental strand, 21910737 - 21910690
Alignment:
Q  150 agggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaa 197  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||    
T  21910737 agggtaaggttgcgtacaatacaccaaatggtgggaccccttcccgaa 21910690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 10378824 - 10378754
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||||||||||||||||||  | | |||||||||||| ||||||||    
T  10378824 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcttggaccctgcatatgcgggagcttta 10378754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 83 - 137
Target Start/End: Original strand, 22327101 - 22327155
Alignment:
Q  83 aaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||||||||| |||||| |||||||||||||| |||||| ||||    
T  22327101 aaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctc 22327155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 31382303 - 31382233
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||| ||||| ||| | |||||||||||||||||||||||||||| | | |||||||||||| ||||||||    
T  31382303 caggataaggctgcgtacaatacaccaaatggtgggaccccttcctggaccctgcatatgcgggagcttta 31382233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 81 - 220
Target Start/End: Original strand, 50811939 - 50812080
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagc--ctcgtgtnnnnnnncagggtaaggttgcatgcaatacacc-aaa 177  Q
    ||||||||||||||| ||||||| ||||||||||  ||| ||||| ||||||||  || ||||       |||||||||||||| | ||||||||| |||    
T  50811939 gtaaagttgttgtcacgtgactgaaaggtcacggaatcatgtcctggaaacagcttcttgtgtaaaaaaacagggtaaggttgcgtacaatacaccaaaa 50812038  T
Q  178 tggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    |||| |||||||||||||   ||||| |||||| |||||||||    
T  50812039 tggt-ggaccccttcccgcgccctgcgtatgcgggagctttaa 50812080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 4430195 - 4430142
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 123  Q
    ||||||| || ||||||||||||||||||||||| ||||||||||||| |||||    
T  4430195 tggcgcagctggtaaagttgttgtcatgtgactggaaggtcacgggtttaagtc 4430142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 22151495 - 22151560
Alignment:
Q  72 gcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||  ||||||||||||||| ||||||||||||||  ||||||||| || |||||||||||    
T  22151495 gcgcaactgataaagttgttgtcatctgactgtaaggtcataggttcaagttctggaaacagcctc 22151560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 219
Target Start/End: Original strand, 35005139 - 35005264
Alignment:
Q  97 gtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn-cagggtaaggttgcatgcaatacaccaaa--tggtgggaccccttcc 193  Q
    ||||||| ||||||||||||||||||| |  |||||||||| |||        |||||||||| ||||| ||||||||||||  ||||||||||||||||    
T  35005139 gtgactgaaaggtcacgggttcaagtcttgaaaacagcctcttgtgtaaaaaacagggtaaggctgcatacaatacaccaaaaatggtgggaccccttcc 35005238  T
Q  194 cgaatcctgcatatgcgagagcttta 219  Q
    || | ||||| |||||| | ||||||    
T  35005239 cggaccctgcgtatgcgggcgcttta 35005264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 50760384 - 50760328
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||  ||||||||||    
T  50760384 gtaaagtagttgtcatgtgactgagaggtcacgggttcaagtcctgaaaacagcctc 50760328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 52910217 - 52910273
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||||||||||| |||||||| ||||||| || | |||||||||||    
T  52910217 gtaaagttgttgtcatgtgactgaaaggtcacaggttcaactcttggaaacagcctc 52910273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 23371124 - 23371178
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcc 135  Q
    ||||||||||| ||   |||||| |||||||||||||||||||||||||||||||    
T  23371124 gtaaagttgttttcgcatgactgaaaggtcacgggttcaagtcctagaaacagcc 23371178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 219
Target Start/End: Original strand, 23796538 - 23796604
Alignment:
Q  153 gtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| | ||||||||||||||||| |||||||||||  | |||||||||||  ||||||||    
T  23796538 gtaaggttgcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgctggagcttta 23796604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 81 - 130
Target Start/End: Complemental strand, 10378883 - 10378834
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaa 130  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||| ||||    
T  10378883 gtaaagttgttgtcacgtgactgaaaggttacgggttcaagtcctggaaa 10378834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 50606498 - 50606542
Alignment:
Q  175 aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||||||| | |||||||||||| ||||||||    
T  50606498 aaatggtgggaccccttcccggaccctgcatatgcgggagcttta 50606542  T

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Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 220
Target Start/End: Original strand, 43768208 - 43768279
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    |||||||||| ||| | ||||||||||| |||||||||||||||||  | ||||| ||| || |||||||||    
T  43768208 cagggtaaggctgcctacaatacaccaattggtgggaccccttcccagaccctgcgtatacgggagctttaa 43768279  T

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Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 4249515 - 4249461
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    |||||||||||||||||||| ||||||||||| | ||  |||||| |||||||||    
T  4249515 caatacaccaaatggtgggatcccttcccgaaccttgtgtatgcgggagctttaa 4249461  T

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Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 4249839 - 4249785
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    |||||||||||||||||||| ||||||||||| | ||  |||||| |||||||||    
T  4249839 caatacaccaaatggtgggatcccttcccgaaccttgtgtatgcgggagctttaa 4249785  T

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Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 4250163 - 4250109
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    |||||||||||||||||||| ||||||||||| | ||  |||||| |||||||||    
T  4250163 caatacaccaaatggtgggatcccttcccgaaccttgtgtatgcgggagctttaa 4250109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 4587630 - 4587584
Alignment:
Q  171 caccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    ||||||||||||||||||||||||| | ||||| |||||| ||||||    
T  4587630 caccaaatggtgggaccccttcccggaccctgcctatgcgggagctt 4587584  T

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Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 21723642 - 21723719
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||| | || ||||| ||||||||||||||||||||||| | ||| ||  |||| |||||| |||||||||||    
T  21723642 aggggtaaccttcgcacaactggtaaagttgttgtcatgtgactggatggttacaagttc-agtcctggaaacagcctc 21723719  T

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Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 35019230 - 35019368
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn-cagggtaaggttgcatgcaatacaccaaatg 179  Q
    |||||||||||||||  |||||| |||||||| | ||||||||||  ||||| |||| |||        |||  ||||| ||||| ||||||||||| ||    
T  35019230 gtaaagttgttgtcacatgactgaaaggtcacagattcaagtcctgtaaacaacctcttgtataaaaatcagtataaggctgcatacaatacaccaattg 35019329  T
Q  180 gtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||||  | ||||| |||||||||||||||    
T  35019330 gtgggacccc-tcccagaccctgcgtatgcgagagcttta 35019368  T

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Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 91 - 133
Target Start/End: Original strand, 43768168 - 43768210
Alignment:
Q  91 tgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag 133  Q
    |||||||| |||| ||||||||||||||||||||| |||||||    
T  43768168 tgtcatgtcactgaaaggtcacgggttcaagtcctggaaacag 43768210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 42304298 - 42304226
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaa--tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||| | |||||||| |||  |||||||||||||||||| | ||||| |||| | ||||||||    
T  42304298 cagggtaaggttgcgtacaatacacaaaaaatggtgggaccccttcccggaccctgcgtatgtgggagcttta 42304226  T

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Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 19701570 - 19701626
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||||| |||||||| || |||||||||| ||||| |  ||||||||||    
T  19701570 gtaaagttgttgtcgtgtgactgaaatgtcacgggtttaagtcatgaaaacagcctc 19701626  T

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Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 30555210 - 30555254
Alignment:
Q  175 aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||||| || | ||||| |||||||||||||||    
T  30555210 aaatggtgggaccccttcacggaccctgcgtatgcgagagcttta 30555254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 45264474 - 45264418
Alignment:
Q  164 tgcaatacaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||| ||||||||||||||| |  | |||||||||||| ||||||||    
T  45264474 tgcaatacaccaaaatggtgggaccccttctcagaccctgcatatgcgggagcttta 45264418  T

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Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 41014272 - 41014434
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       ||||||||    
T  41014272 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaa 41014371  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | |||||||||||||||||||||||||||| | | || ||||||||| ||||||||    
T  41014372 ggctgcgtacaatacaccaaatggtgggaccccttcctggaccccgcatatgcgggagcttta 41014434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 35710267 - 35710424
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| |||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||| |||        ||||||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtaactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaat-agggtaag 35710365  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | ||| | |||||||||||||||||||||||||||||| | | |||||||||| |||||    
T  35710366 gctgcgttcaatacaccaaatggtgggaccccttcccggaacatgcatatgcgggagct 35710424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 38879534 - 38879699
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||    
T  38879534 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta 38879633  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||| | ||||||||||  |||||||||||||||||||| | ||||| |||||| ||||||||    
T  38879634 aggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttta 38879699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 58 - 210
Target Start/End: Complemental strand, 8170163 - 8170012
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||| ||||| |||||||||| ||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||  |||       |||||||||    
T  8170163 gagggctaaccttggcgcaactggtaaagttgttgtcatgtgaccgaaaggtcacgggttcaagtcctggaaacagccttttgt-gtaaaacagggtaag 8170065  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcg 210  Q
    | ||| | |||||||||||||||||||||||||||||| | ||||||||||||    
T  8170064 gctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcg 8170012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 61 - 219
Target Start/End: Complemental strand, 4619284 - 4619123
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggt 159  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| |||        ||||||||||     
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaatagcctcttgtgtaaaaaacagggtaaggc 4619185  T
Q  160 tgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| | ||||||||||  |||||||||||||||||||| | || ||||||||||||||||||    
T  4619184 tgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagcttta 4619123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 24448844 - 24449006
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||  |||         |||||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagccttttgtgtaaaaaatagggtaa 24448943  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | |||||||||||||||||||||||||||||| | ||||| |||||  ||||||||    
T  24448944 ggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcaggagcttta 24449006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 61 - 195
Target Start/End: Original strand, 43334159 - 43334297
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaagg 158  Q
    |||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||  ||||       ||||||||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaaacagggtaagg 43334258  T
Q  159 ttgcatgcaatacacc--aaatggtgggaccccttcccg 195  Q
     ||| | |||||||||  |||||||||||||||||||||    
T  43334259 ctgcgtacaatacaccaaaaatggtgggaccccttcccg 43334297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 220
Target Start/End: Original strand, 27328703 - 27328871
Alignment:
Q  55 actgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncaggg 153  Q
    ||||| |||||||| || ||||| | ||||||||||||||||||||||| |||||||| |||||||||||| ||||||| ||| |||        |||||    
T  27328703 actgaagggtaaccttgacgcaattggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagtctcttgtgtaaaaaacaggg 27328802  T
Q  154 taaggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    ||||| ||| | ||||||||||  |||||||||||||||||||||| ||||| |||||| |||||||||    
T  27328803 taaggctgcgtacaatacaccaataatggtgggaccccttcccgaaccctgcgtatgcgggagctttaa 27328871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 91 - 216
Target Start/End: Original strand, 32703411 - 32703535
Alignment:
Q  91 tgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggacccct 190  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||| |||       |||||||||| ||| | |||||||||||||||||||||||||    
T  32703411 tgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggacccct 32703509  T
Q  191 tcccgaatcctgcatatgcgagagct 216  Q
    ||||| | |||||||||||| |||||    
T  32703510 tcccggaccctgcatatgcgggagct 32703535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 37024736 - 37024656
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  37024736 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 37024656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 59 - 215
Target Start/End: Original strand, 2838733 - 2838890
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgt-aaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    |||||||||| |||||||||  |||||||||||||||||||||||| ||||||||| | |||||||  ||||||||| || |||       |||||||||    
T  2838733 aggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgtaaaggtcacgaggtcaagtctcagaaacagcatcttgtgtaaaaacagggtaag 2838832  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagc 215  Q
    | ||| | |||||||||||||||||||| |||||| || | ||||| |||||| ||||    
T  2838833 gctgcgtacaatacaccaaatggtgggatcccttctcggaccctgcgtatgcgggagc 2838890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 1565385 - 1565464
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||| |||||||||||||| |||||| ||||    
T  1565385 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacaacctc 1565464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 89 - 190
Target Start/End: Complemental strand, 22908014 - 22907913
Alignment:
Q  89 gttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccc 188  Q
    ||||| ||||||||| ||||||| |||||||||||| |||||||||||| |||       ||| |||||||||||| |||||||||||||||||||||||    
T  22908014 gttgttatgtgactgaaaggtcaagggttcaagtccaagaaacagcctcttgtgtaaaaacagagtaaggttgcatacaatacaccaaatggtgggaccc 22907915  T
Q  189 ct 190  Q
    ||    
T  22907914 ct 22907913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 23974734 - 23974813
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  23974734 tgaggggtaaccttggcgcaacg-gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacaacctc 23974813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 218
Target Start/End: Original strand, 22600407 - 22600569
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| || || |||| ||||||||||| ||||||||||| ||||| ||||||||||||||| ||||||   |  |||        |||||||    
T  22600407 tgaggggtaaccttgacgtaactggtaaagttgttatcatgtgactggaaggttacgggttcaagtcctggaaacaatattttgtgtaaaacacagggta 22600506  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    ||| ||  | |||||||||||||||||||| ||||||||| ||||||| |||||| |||||||    
T  22600507 aggctgtgtacaatacaccaaatggtgggatcccttcccggatcctgcgtatgcgggagcttt 22600569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 22187238 - 22187318
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||  |||||||||| |||||||||||||||| |||||| |||||||| |||| ||||||| |||||||||||    
T  22187238 tgaggggtaactttggcgcaactagtaaagttgttgtcatttgactgaaaggtcaccggtttaagtcctggaaacagcctc 22187318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 22861844 - 22861691
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggtt 160  Q
    |||||||| |||| |||||  |||||||||||||||||||||| |||||||||| |||||||||||||| ||| ||| |||        |  |||||  |    
T  22861844 gggtaaccttggcacaactgataaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaagcagtctcttgtgtaaaacaa--gtaagact 22861747  T
Q  161 gcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    ||   ||||||| ||||||||||||||||||| |||| |||||||||||| |||||    
T  22861746 gctcacaatacatcaaatggtgggaccccttctcgaaccctgcatatgcgggagct 22861691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 209085 - 208946
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacacc-aaatg 179  Q
    ||||||||||||||||||||||  ||||||||  ||||||||||| | |||| |||| |||       |||||||||| ||||| ||||||||| |||||    
T  209085 gtaaagttgttgtcatgtgactaaaaggtcacaagttcaagtcctggcaacaacctcttgtgtaaaaacagggtaaggctgcattcaatacaccaaaatg 208986  T
Q  180 gtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||| | | ||||  ||||| |||||||||    
T  208985 gtgggaccccttcctggaccctgggtatgcaagagcttta 208946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 7097849 - 7097779
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||| | ||||||||||||||||| |||||||||||||| ||||| |||||| ||||||||    
T  7097849 cagggtaaggttgcgtacaatacaccaaatggtgagaccccttcccgaaccctgcgtatgcgggagcttta 7097779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 31299591 - 31299665
Alignment:
Q  63 gtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||| ||| |||||| ||||||||||||||||||||||   |||||||  |||||||||||||||||||||||    
T  31299591 gtaaccttggtgcaactggtaaagttgttgtcatgtgacttacaggtcactagttcaagtcctagaaacagcctc 31299665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 87 - 216
Target Start/End: Original strand, 1405170 - 1405300
Alignment:
Q  87 ttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnnc-agggtaaggttgcatgcaatacaccaaatggtggga 185  Q
    ||||||||||||||||  ||||||||||||||||||||| |||||| |||| | |         || ||||| |||| | ||||||||||||||||||||    
T  1405170 ttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaacaacctcttatataaaaaatagagtaagtttgcgtacaatacaccaaatggtggga 1405269  T
Q  186 ccccttcccgaatcctgcatatgcgagagct 216  Q
    ||| |||| ||| |||||||||||| |||||    
T  1405270 ccctttcctgaaccctgcatatgcgggagct 1405300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 84 - 141
Target Start/End: Complemental strand, 10634301 - 10634244
Alignment:
Q  84 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt 141  Q
    |||||||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||    
T  10634301 aagttgttgtcaagtgactgaaaggtcatgggttcaagtcctagaaacaacctcgtgt 10634244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 34154903 - 34154842
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcg 210  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||| | ||||||||||||    
T  34154903 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcg 34154842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 43574652 - 43574722
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | ||||| |||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  43574652 cagggtaaggctgcgtacaatataccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 43574722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 13801858 - 13801786
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||  ||||||||||||||||||| | || ||||||||||||||||||    
T  13801858 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgagagcttta 13801786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 16957377 - 16957430
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  16957377 caatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 16957430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 195
Target Start/End: Complemental strand, 19143100 - 19142986
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||| ||||||||| ||||||  || | ||| |||||||||||| |||||| |||| |||       |||||||||| ||| | || ||||||||||||    
T  19143100 gtaaaattgttgtcacgtgactaaaatgccacaggttcaagtcctggaaacaacctcttgtgtaaaaacagggtaaggctgcgtacagtacaccaaatgg 19143001  T
Q  181 tgggaccccttcccg 195  Q
    |||||||||||||||    
T  19143000 tgggaccccttcccg 19142986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 7368442 - 7368501
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatg 208  Q
    |||||||||| ||| | ||||||||||| |||||||||||||||||| | ||||||||||    
T  7368442 cagggtaaggctgcgtacaatacaccaattggtgggaccccttcccggaccctgcatatg 7368501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 39079924 - 39079882
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 123  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  39079924 gtaaagttgttgtcatgtgacagaaaggtcacgggttcaagtc 39079882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 39301100 - 39301142
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 123  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  39301100 gtaaagttgttgtcatgttactgaaaggtcacgggttcaagtc 39301142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 34074717 - 34074664
Alignment:
Q  84 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||  |||||| ||||||||  |||||||||||||||||||||||    
T  34074717 aagttgttgtcacatgactgaaaggtcacaagttcaagtcctagaaacagcctc 34074664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 41425994 - 41426039
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttccc 194  Q
    |||||||||| ||||| ||||||||||| |||||||||||||||||    
T  41425994 cagggtaaggctgcatacaatacaccaattggtgggaccccttccc 41426039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 1850624 - 1850660
Alignment:
Q  88 tgttgtcatgtgactgtaaggtcacgggttcaagtcc 124  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1850624 tgttgtcatgtgactgaaaggtcacgggttcaagtcc 1850660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 11657785 - 11657733
Alignment:
Q  153 gtaaggttgcatgcaatacaccaaa-tggtgggaccccttcccgaatcctgca 204  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||| ||||||    
T  11657785 gtaaggctgcatacaatacaccaaaatggtgggaccccttcccgaaccctgca 11657733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 17419880 - 17419944
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagc 134  Q
    ||||| |||| ||||| ||||||| ||||||||| ||||| ||| ||||||||||| ||||||||    
T  17419880 tggcgtaactggtaaaattgttgtaatgtgactgaaaggttacgagttcaagtcctggaaacagc 17419944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 102
Target Start/End: Original strand, 19438703 - 19438747
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgact 102  Q
    ||||||||||| |||||||||| |||||||||||||||| |||||    
T  19438703 gaggggtaaccttggcgcaactggtaaagttgttgtcatatgact 19438747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 28516592 - 28516536
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||| | |||||| ||||    
T  28516592 gtaaagttgttgtcaggtggctgaaaggtcacgggttcaagtcttggaaacatcctc 28516536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 120
Target Start/End: Complemental strand, 31362493 - 31362454
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaa 120  Q
    |||||||||||||||||||| || ||||||||||||||||    
T  31362493 gtaaagttgttgtcatgtgattggaaggtcacgggttcaa 31362454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 10306547 - 10306493
Alignment:
Q  166 caatacaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||| |||||||||||||||||| | ||||| |||||| ||||||||    
T  10306547 caatacaccaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10306493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 12006499 - 12006445
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcac-gggttcaagtc 123  Q
    ||||||||||  | |||||||||||||||||||| |||||||| |||||||||||    
T  12006499 tggcgcaactgctcaagttgttgtcatgtgactgaaaggtcacggggttcaagtc 12006445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 12477193 - 12477139
Alignment:
Q  166 caatacaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||| |||||||||||||||||| || |||| ||||| |||||||||    
T  12477193 caatacaccaaaatggtgggaccccttcccggattctgcgtatgcaagagcttta 12477139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 16880736 - 16880666
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | ||||||||||||||||| |||| ||||||| | | ||| |||||| ||||||||    
T  16880736 cagggtaaggctgcgtacaatacaccaaatggtgtgaccacttcccggaccatgcgtatgcgggagcttta 16880666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 4654478 - 4654434
Alignment:
Q  175 aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||| |||||| |||| |||||||||||| ||||||||    
T  4654478 aaatggtgggatcccttctcgaaccctgcatatgcgggagcttta 4654434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 12006418 - 12006347
Alignment:
Q  150 agggtaaggttgcatgcaatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||| | ||| |||||||||||  ||||||||||||||||||  | ||||| |||||| ||||||||    
T  12006418 agggtaaggctccatacaatacaccaataatggtgggaccccttcccagaccctgcctatgcgggagcttta 12006347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 5e-41; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 57 - 195
Target Start/End: Original strand, 16735416 - 16735554
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||       ||||||||    
T  16735416 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgtaacgtcacgggttcaagtcctcgaaacagcctcttgtagaaaaacagggtaa 16735515  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccg 195  Q
    || ||| | ||||||||||||||||||||||||||||||    
T  16735516 ggctgcgtacaatacaccaaatggtgggaccccttcccg 16735554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 56 - 219
Target Start/End: Original strand, 39203490 - 39203652
Alignment:
Q  56 ctgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggta 155  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||       |||||||    
T  39203490 ctgaggggtaaccttggcacaacttgtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtccttgaaacagcctcttgt-gtaaaacagggta 39203588  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||| | |||||||||||||||||||||||||||||| | | |||||||||| ||||||||    
T  39203589 aggttgcgtacaatacaccaaatggtgggaccccttcccggaccttgcatatgcgggagcttta 39203652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 53 - 219
Target Start/End: Complemental strand, 40272998 - 40272831
Alignment:
Q  53 ttactgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncag 151  Q
    |||||||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| |||||| |||| |||        |||    
T  40272998 ttactgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcatgggttcaagtcctggaaacaacctcttgtgtaaaaaacag 40272899  T
Q  152 ggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||| ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  40272898 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 40272831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 57 - 220
Target Start/End: Complemental strand, 8247871 - 8247705
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||    
T  8247871 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggta 8247772  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    ||||||| | ||||||||||  ||||||||||| |||||||| | ||||| |||||| |||||||||    
T  8247771 aggttgcgtacaatacaccaataatggtgggactccttcccggaccctgcgtatgcgggagctttaa 8247705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 1217065 - 1217223
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| |||||||||| ||||||| |||| ||||||||||||||||||||| ||||||||||| |||       ||||||||    
T  1217065 tgaggggtaaccttggcgcaactggtaaagttgtagtcatgtcactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacagggtaa 1217163  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    || ||| | ||||||||||||||| |||||||||||||| | |||||||||||| |||||    
T  1217164 ggctgcgtacaatacaccaaatggcgggaccccttcccggaccctgcatatgcgggagct 1217223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 57 - 217
Target Start/End: Original strand, 22609742 - 22609901
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||  ||||||||||||||||||||||||||||| ||||||||||||| | ||||||||||| |||       ||||||||    
T  22609742 tgaggggtaaccttggcgcaacg-gtaaagttgttgtcatgtgactgtaaggtaacgggttcaagtcttggaaacagcctcttgtgtaaaaacagggtaa 22609840  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    || ||| | |||||||||||||||||||||||||||||| | | ||| |||||| ||||||    
T  22609841 ggctgcgtacaatacaccaaatggtgggaccccttcccggaccttgcgtatgcgggagctt 22609901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 5173903 - 5173738
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaa-gttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggta 155  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||| |||| |||       ||  |||    
T  5173903 tgaggggtaaccttggcgcaactcgtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaacaaagta 5173804  T
Q  156 aggttgcatgcaatacacc--aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||||||  |||||||||| |||||||||| | | ||| |||||| ||||||||    
T  5173803 aggttgcatgcaatacaccaaaaatggtggggccccttcccggaccttgcgtatgcgggagcttta 5173738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 46421218 - 46421053
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||        ||||||||    
T  46421218 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgacttaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 46421119  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    || ||| | ||||||||||  |||||||||||||||||||| | ||||| |||||| |||||||||    
T  46421118 ggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagctttaa 46421053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 13730785 - 13730621
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        ||||||||    
T  13730785 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 13730686  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||  | ||||||||||  |||||||||||||||||||| | || ||||||||| ||||||||    
T  13730685 ggctgtgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 13730621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 22123092 - 22122939
Alignment:
Q  62 ggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttg 161  Q
    ||||||| |||||| ||| ||||| ||||||||||||||||| |||||| |||||||||||||| ||||||| ||| |||       |||||||||| ||    
T  22123092 ggtaaccttggcgccactggtaaatttgttgtcatgtgactgaaaggtcgcgggttcaagtcctggaaacagtctcttgtgtaaaa-cagggtaaggctg 22122994  T
Q  162 catgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | | |||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  22122993 cgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgagagct 22122939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 52926391 - 52926238
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||           |||||    
T  52926391 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgta--------gtaag 52926300  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    | ||| | ||||||||||||||||||||| |||||||| | ||||| |||||| ||||||||    
T  52926299 gctgcgtacaatacaccaaatggtgggacaccttcccggaccctgcgtatgcgggagcttta 52926238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 13628975 - 13628809
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaa-gttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggt 154  Q
    |||||||||||| |||| ||||| ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        ||||||    
T  13628975 tgaggggtaaccttggcacaactggtaaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacagggt 13628876  T
Q  155 aaggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||| ||| | ||||||||||  |||||||||||||||||||| | ||||| |||||| ||||||||    
T  13628875 aaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttta 13628809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 26869696 - 26869843
Alignment:
Q  71 ggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaata 170  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||  ||       |||||||||| ||| | |||||    
T  26869696 ggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctctggtgtaaaaacagggtaaggctgcgtacaata 26869795  T
Q  171 caccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    ||||||||||||||||||||| ||| | | ||| |||||| |||||||    
T  26869796 caccaaatggtgggaccccttgccggaccatgcgtatgcgggagcttt 26869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 10870132 - 10870053
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||    
T  10870132 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 10870053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 59 - 219
Target Start/End: Complemental strand, 29366902 - 29366739
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaag 157  Q
    |||||||||| ||||| |||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||| |||        |||||||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaag 29366803  T
Q  158 gttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    | ||| | ||||||||||  |||||||||||||||||||| | ||||| |||| | ||||||||    
T  29366802 gctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgtgggagcttta 29366739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 58 - 217
Target Start/End: Complemental strand, 12914216 - 12914056
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||| ||||||| | ||||||||  ||||||||||| ||||||||||| |||        ||||||||    
T  12914216 gaggggtaaccttggcgcaactggtaaagttgttgtaatgtgaccgaaaggtcacaagttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaa 12914117  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    ||  || | ||||||||||||||||| |||||||||||  | |||||||||||| ||||||    
T  12914116 ggcggcgtacaatacaccaaatggtgagaccccttcccagaccctgcatatgcgggagctt 12914056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 81 - 219
Target Start/End: Original strand, 26573126 - 26573265
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||||| ||| | ||||||||||| ||    
T  26573126 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcctgtgtaaaaaacagggtaaggctgcgtacaatacaccaattg 26573225  T
Q  180 gtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||||| | ||||| |||||| ||||||||    
T  26573226 gtgggaccccatcccggaccctgcgtatgcgtgagcttta 26573265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 57 - 180
Target Start/End: Complemental strand, 7697067 - 7696945
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||||| ||| |||       ||||||||    
T  7697067 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactaaaaggtcacgggttcaagtcctggaaacagtctcttgt-gtaaaacagggtaa 7696969  T
Q  157 ggttgcatgcaatacaccaaatgg 180  Q
    || ||| | |||||||||||||||    
T  7696968 ggctgcgtacaatacaccaaatgg 7696945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 6412002 - 6411841
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| || ||||||| |||||||||||||||||| ||||  |||||| ||||||||||| |  |||||||||| |||       |||||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgtaactgataggtcatgggttcaagtcttgtaaacagcctcttgtgtaaaaacagggtaag 6411903  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    | ||| | |||||||||||||| ||||||||||||||  | | ||| |||||| ||||||||    
T  6411902 gctgcgtacaatacaccaaatgatgggaccccttcccagaccttgcgtatgcgggagcttta 6411841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 9607178 - 9607258
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| |||||||  |||||||||||| |||||||||||    
T  9607178 tgaggggtaaccttggcgcaacttgtaaagttgttgtcatgtgactgaaaggtcatcggttcaagtcctggaaacagcctc 9607258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 58 - 188
Target Start/End: Complemental strand, 4495845 - 4495714
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||||  ||| |||||  |||        ||||||||    
T  4495845 gaggggtaaccttcgcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctgaaaatagcctattgtgtaaaaaacagggtaa 4495746  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccc 188  Q
    || ||| | |||||||||||||||||||||||    
T  4495745 ggctgcgtacaatacaccaaatggtgggaccc 4495714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 219
Target Start/End: Original strand, 33926094 - 33926221
Alignment:
Q  93 tcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacacca-aatggtgggacccctt 191  Q
    ||||||||||| ||||||| ||||||||||||| |||| |||||| |||       |||||||||| ||  | |||||||||| ||||||||||||||||    
T  33926094 tcatgtgactgaaaggtcatgggttcaagtcctggaaatagcctcttgtgtaaaaacagggtaaggctgtgtacaatacaccataatggtgggacccctt 33926193  T
Q  192 cccgaatcctgcatatgcgagagcttta 219  Q
    || | | |||||||||||||||||||||    
T  33926194 cctggaccctgcatatgcgagagcttta 33926221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 195
Target Start/End: Complemental strand, 34420802 - 34420686
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacacc-aaat 178  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||||| ||| | | ||||||| ||||    
T  34420802 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtaccatacaccaaaat 34420703  T
Q  179 ggtgggaccccttcccg 195  Q
    |||||||||||||||||    
T  34420702 ggtgggaccccttcccg 34420686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 30928302 - 30928167
Alignment:
Q  84 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatggtg 182  Q
    ||||| |||||||||||||| ||||||||||||||||||||| ||||||||||| |||        || ||||||||||  |  |||||||||| ||| |    
T  30928302 aagttcttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacaaggtaaggttgtgtaaaatacaccaattggcg 30928203  T
Q  183 ggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    ||||||||||||| | |||||||||| | |||||||    
T  30928202 ggaccccttcccggaccctgcatatgtgggagcttt 30928167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 53062037 - 53062093
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||    
T  53062037 gtaaagttgttgtcatgtgactgaaaggtcacgtgttcaagtcctggaaacagcctc 53062093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 31592878 - 31592982
Alignment:
Q  111 acgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcg 210  Q
    ||||||||||||||| ||||||||||| |||       |||||||||| ||| | ||||||||||||||||||||| |||||||| | ||||||||||||    
T  31592878 acgggttcaagtcctggaaacagcctcttgtgtaaaa-cagggtaaggctgcgtacaatacaccaaatggtgggactccttcccggaccctgcatatgcg 31592976  T
Q  211 agagct 216  Q
     |||||    
T  31592977 ggagct 31592982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 34771453 - 34771386
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  34771453 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 34771386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 81 - 185
Target Start/End: Complemental strand, 45620987 - 45620881
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaaggttgcatgcaatacaccaaat 178  Q
    ||||||||||||||| ||||||| |||||||||||||||||| || |||||||||||  ||||       |||||||||| ||| | ||||||||||| |    
T  45620987 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagttctggaaacagcctcttgtgtaaaaaaacagggtaaggctgcgtacaatacaccaatt 45620888  T
Q  179 ggtggga 185  Q
    |||||||    
T  45620887 ggtggga 45620881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 516417 - 516464
Alignment:
Q  90 ttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  516417 ttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctc 516464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 15797288 - 15797347
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatg 208  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||| | ||||||||||    
T  15797288 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatg 15797347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 24851367 - 24851320
Alignment:
Q  172 accaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||    
T  24851367 accaaatggtgggaccccttcccggatcctgcatatgcgggagcttta 24851320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 188
Target Start/End: Complemental strand, 54032705 - 54032609
Alignment:
Q  93 tcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccc 188  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||| |||        |||||||||| ||||| ||||||||| |||||||||||||    
T  54032705 tcatgtgactggaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaaaacagggtaaggctgcatacaatacaccgaatggtgggaccc 54032609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 54484762 - 54484829
Alignment:
Q  152 ggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||| ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  54484762 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 54484829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 12525385 - 12525462
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||| |||||||||| ||||||||||   ||| |||||| |||||||| ||||| |||||| |||||||||||    
T  12525385 tgaggggtaaccttggcgcaactggtaaagttgt---catatgactgaaaggtcacaggttcgagtcctggaaacagcctc 12525462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 7942993 - 7943042
Alignment:
Q  85 agttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagc 134  Q
    ||||||||||||||||||| |||||||||| |||||||||| ||||||||    
T  7942993 agttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagc 7943042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 112
Target Start/End: Complemental strand, 25517353 - 25517300
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcac 112  Q
    |||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcac 25517300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 45948926 - 45948857
Alignment:
Q  150 agggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||| ||||| ||||||||||| ||||||||||||||| || | ||||| |||||| ||||||||    
T  45948926 agggtaaggctgcatacaatacaccaattggtgggaccccttctcggaccctgcgtatgcgggagcttta 45948857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 25944468 - 25944524
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| ||||||| ||||||| ||||||||||||| ||||| |||||    
T  25944468 gtaaagttgttgtcacgtgactgaaaggtcatgggttcaagtcctggaaaccgcctc 25944524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 195
Target Start/End: Original strand, 47624109 - 47624155
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccg 195  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||||    
T  47624109 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 47624155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Complemental strand, 54374434 - 54374364
Alignment:
Q  150 agggtaaggttgcatgcaatacaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||| ||| | |||| ||||||| |||||||||||||||||| | |||||||||||| ||||||||    
T  54374434 agggtaaggctgcgtacaatccaccaaaatggtgggaccccttcccggaccctgcatatgcgggagcttta 54374364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 353440 - 353368
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||  ||||||||||||||||||| | || ||||||||| ||||||||    
T  353440 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 353368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 25517242 - 25517189
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||| ||||||||||||||||||||| ||||||| |||||  ||||||||    
T  25517242 caatacacaaaatggtgggaccccttcccggatcctgcgtatgctggagcttta 25517189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 97
Target Start/End: Original strand, 9276249 - 9276289
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatg 97  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  9276249 tgaggggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 35417915 - 35417971
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| |||||||||||  |||||||| |||||| |||| |||||||||||    
T  35417915 gtaaagttgttatcatgtgactgagaggtcacgagttcaaatcctggaaacagcctc 35417971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 194
Target Start/End: Complemental strand, 45139624 - 45139520
Alignment:
Q  93 tcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn-cagggtaaggttgcatgcaatacacc--aaatggtgggacccc 189  Q
    ||||||||||| ||||||||||||||||||  | |||||| |||| |||        |||||||||| ||||| |||||||||  |||||||||||||||    
T  45139624 tcatgtgactgaaaggtcacgggttcaagttttggaaacaacctcttgtgtaaaacacagggtaaggctgcatacaatacaccaaaaatggtgggacccc 45139525  T
Q  190 ttccc 194  Q
    |||||    
T  45139524 ttccc 45139520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 219
Target Start/End: Complemental strand, 829528 - 829461
Alignment:
Q  153 gtaaggttgcatgcaatacaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||| ||||| | |||||||||||| |||||||||||||||||||| ||||| |||||  ||||||||    
T  829528 gtaaagttgcgtacaatacaccaaaatggtgggaccccttcccgaaccctgcgtatgcaggagcttta 829461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 103
Target Start/End: Original strand, 21874999 - 21875041
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactg 103  Q
    |||||||| || ||||||| |||||||||||||||||||||||    
T  21874999 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactg 21875041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 210
Target Start/End: Original strand, 26292417 - 26292459
Alignment:
Q  168 atacaccaaatggtgggaccccttcccgaatcctgcatatgcg 210  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||    
T  26292417 atacaccaaatgatgggatcccttcccgaaccctgcatatgcg 26292459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 35417996 - 35418042
Alignment:
Q  173 ccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||||||||| | || ||| ||||||||||||||    
T  35417996 ccaaatggtgggaccccttcccggaccccgcaaatgcgagagcttta 35418042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 14987025 - 14987097
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||  |||||||||||| |||||| | | |||||||||| ||||||||    
T  14987025 cagggtaaggctgcgtacaatacaccaataatggtgggacccattcccggaccttgcatatgcgggagcttta 14987097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 98
Target Start/End: Original strand, 23871418 - 23871455
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgt 98  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  23871418 gggtaaccttggcgcaactagtaaagttgttgtcatgt 23871455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 49013564 - 49013492
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||  ||||||||||||||||||| | || ||||| ||| ||||||||    
T  49013564 cagggtaaggctgcgtacaatacaccaataatggtgggaccccttcccggaccccgcatacgcgggagcttta 49013492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 5e-41; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 57 - 216
Target Start/End: Complemental strand, 21779441 - 21779283
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| |||||||||| || |||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||       ||||||||    
T  21779441 tgaggggtaaccttggcgcaactggtgaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggagacagcctcttgt-gtaaaacagggtaa 21779343  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  21779342 ggttgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 21779283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 58 - 219
Target Start/End: Complemental strand, 8455497 - 8455335
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        ||||||||    
T  8455497 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaacacagggtaa 8455398  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | |||||||||||||||||||||||||||||| | ||||| |||||  ||||||||    
T  8455397 ggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgccggagcttta 8455335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 61 - 219
Target Start/End: Complemental strand, 25249915 - 25249757
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggtt 160  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||| |||       |||||||||| |    
T  25249915 gggtaaccttggcgcaattggtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcatggaaacagtctcttgtgtacaaacagggtaaggct 25249816  T
Q  161 gcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || | |||||||||||||||||||| ||||||||||| ||||| |||||| ||||||||    
T  25249815 gcgtacaatacaccaaatggtgggatcccttcccgaaccctgcgtatgcgtgagcttta 25249757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 58 - 195
Target Start/End: Complemental strand, 12024099 - 12023962
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       |||||||||    
T  12024099 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaag 12024000  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccg 195  Q
    | ||| | |||||||||||||||||||||||| |||||    
T  12023999 gctgcgtacaatacaccaaatggtgggaccccctcccg 12023962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 52 - 195
Target Start/End: Original strand, 22371005 - 22371146
Alignment:
Q  52 gttactgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncag 151  Q
    |||| |||||||||||| |||| ||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||       |||    
T  22371005 gttaatgaggggtaaccttggcccaactggtaaagttgttgtcatgtgactgggaggtcacgggttcaagtcctggaaacagcctcgtgt--aaaaacag 22371102  T
Q  152 ggtaaggttgcatgcaatacaccaaatggtgggaccccttcccg 195  Q
    ||||||| ||| | ||||||||||||||||||||||||||||||    
T  22371103 ggtaaggctgcgtacaatacaccaaatggtgggaccccttcccg 22371146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 25079900 - 25079736
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggt 154  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||  ||||       || |||    
T  25079900 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcttagaaacaacctcttgtgtaaaaaaacaaggt 25079801  T
Q  155 aaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||| ||| | ||||||||| |||||||||||||||||||| | ||||| ||||| |||||||||    
T  25079800 aaggatgcgtacaatacaccgaatggtgggaccccttcccggaccctgcgtatgcaagagcttta 25079736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 14530271 - 14530436
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||    
T  14530271 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggta 14530370  T
Q  156 aggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| | | | ||||||||||  |||||||||||||||||||| | ||||| |||||| ||||||||    
T  14530371 aggctacgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttta 14530436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 89 - 219
Target Start/End: Original strand, 25641487 - 25641617
Alignment:
Q  89 gttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccc 188  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||| |  |||       |||||||| ||||| | ||||||||||||| |||||||||    
T  25641487 gttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcattttgtgtgaaaacagggtaaagttgcgtacaatacaccaaattgtgggaccc 25641586  T
Q  189 cttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||| |||||||||||||||    
T  25641587 cttcccgaatcctgcgtatgcgagagcttta 25641617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 9671134 - 9671295
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgact-gtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    ||||||||||| |||||||||  |||||||||||||||||||||| | || ||||||||||||| |||| ||||||||||| |||       ||||||||    
T  9671134 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactggaaatgtcacgggttcaaatcctggaaacagcctcttgt-gtaaaacagggtaa 9671232  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  9671233 ggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 9671295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 219
Target Start/End: Original strand, 10543653 - 10543816
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaag 157  Q
    |||||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||| |||        |||||||||    
T  10543653 aggggtaaccttggcgcaactgataaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacggcctcttgtgtaaaaaacagggtaag 10543752  T
Q  158 gttgcatgcaatacacc--aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    | ||| | |||||||||  ||||||||||||||||||||| | ||||| |||||| ||||||||    
T  10543753 gctgcgtacaatacaccaaaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10543816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 23397719 - 23397877
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| ||| |||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||        |||||||    
T  23397719 tgaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctggaaacagcctcttgtgtaaaat-agggtaa 23397817  T
Q  157 ggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    || | | | ||||||||||||||||||||||||||| || | ||| |||||||| |||||    
T  23397818 ggctacgtacaatacaccaaatggtgggaccccttctcggaccctacatatgcgggagct 23397877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 17623535 - 17623669
Alignment:
Q  75 caactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacac 173  Q
    ||||| ||||||||||||||||| ||||| ||||||||||||||||||||| |||||| |||| |||        |||||||||| ||| | ||||||||    
T  17623535 caactggtaaagttgttgtcatgcgactggaaggtcacgggttcaagtcctcgaaacaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacac 17623634  T
Q  174 caaatggtgggaccccttcccgaatcctgcatatg 208  Q
    |||||||||| ||||||||||||||||||| ||||    
T  17623635 caaatggtggaaccccttcccgaatcctgcgtatg 17623669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 11514392 - 11514551
Alignment:
Q  60 ggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaagg 158  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||| |||        ||  ||||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaactcctggaaacagcctcttgtgtaaaaaacaaagtaagg 11514491  T
Q  159 ttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
     ||| | |||||||||||||||||||| ||||||||  | ||||| |||||| ||||||||    
T  11514492 ctgcgtacaatacaccaaatggtggga-cccttcccagaccctgcgtatgcgggagcttta 11514551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 60 - 219
Target Start/End: Original strand, 17896215 - 17896376
Alignment:
Q  60 ggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaag 157  Q
    ||||||||| || ||||||| ||||||||||||||||||||| | |||||||||| ||||||||||||||||| ||||  ||||        ||||||||    
T  17896215 ggggtaaccttgacgcaactggtaaagttgttgtcatgtgaccgaaaggtcacggattcaagtcctagaaacaacctcttgtgtaaaaaaatagggtaag 17896314  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    | ||| | ||||| ||||||||||||||||||||| || | ||||| |||| | ||||||||    
T  17896315 gctgcgtacaatataccaaatggtgggaccccttctcggaccctgcgtatgtgggagcttta 17896376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 58 - 219
Target Start/End: Original strand, 5840982 - 5841146
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| ||| |||| |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||         |||||||    
T  5840982 gaggggtaaccttggtgcaaatgataaagttgttgtcatgtgactggaaggtcacgggttcaagtcctagaaacagccttttgtgtaaaaaatagggtaa 5841081  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | ||||||| ||  |||||||||||||||||||| | || ||||||||| ||||||||    
T  5841082 ggatgcgtacaatacatcaataatggtgggaccccttcccggaccccgcatatgcgggagcttta 5841146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 14444720 - 14444844
Alignment:
Q  95 atgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccccttccc 194  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| |||       |||||||||| ||  | | |||||||||||||||||||||||||||    
T  14444720 atgtgactggaaggtcacgggttcaagtcctggaaacagcctcttgtgtaaaaacagggtaaggctgtgtacgatacaccaaatggtgggaccccttccc 14444819  T
Q  195 gaatcctgcatatgcgagagcttta 219  Q
    | | ||||| |||||| ||||||||    
T  14444820 ggaccctgcgtatgcgggagcttta 14444844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 59 - 219
Target Start/End: Complemental strand, 24200805 - 24200642
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaag 157  Q
    |||||||||| ||  |||||| ||||||||||||||||||||||| || |||||||||||||||||| ||||||||||| |||        |||||||||    
T  24200805 aggggtaaccttgatgcaactggtaaagttgttgtcatgtgactgaaaagtcacgggttcaagtcctggaaacagcctcttgtgtaaaaaacagggtaag 24200706  T
Q  158 gttgcatgcaatacacc--aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    | ||| | |||||||||  ||||||||||| ||||||||| | ||||  |||| ||||||||||    
T  24200705 gctgcgtacaatacaccaaaaatggtgggaacccttcccggaccctgagtatgtgagagcttta 24200642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 75 - 203
Target Start/End: Original strand, 17667973 - 17668102
Alignment:
Q  75 caactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacac 173  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| | |||| |||        |||||||||| ||| | ||||||||    
T  17667973 caactggtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcctggaaagaacctcttgtgtaaaaatcagggtaaggctgcgtacaatacac 17668072  T
Q  174 caaatggtgggaccccttcccgaatcctgc 203  Q
    |||||||||| |||||||| |||| |||||    
T  17668073 caaatggtggaaccccttctcgaaccctgc 17668102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 137
Target Start/End: Original strand, 17705449 - 17705528
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||  ||||||||||||||||||||| ||||| |||||    
T  17705449 gaggggtaaccttggtgcaactggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtcctggaaaccgcctc 17705528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 60 - 219
Target Start/End: Complemental strand, 19977893 - 19977733
Alignment:
Q  60 ggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaagg 158  Q
    ||||||||| ||||| |||| || |||||||||||||||||| | |||||||||||||||||| || ||||||||||| | |         ||| |||||    
T  19977893 ggggtaaccttggcggaactggtgaagttgttgtcatgtgaccgaaaggtcacgggttcaagttctggaaacagcctcttttgtaaaaaataggataagg 19977794  T
Q  159 ttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||| | |||||||||||||||||||| ||||||||||| | ||  |||||| ||||||||    
T  19977793 ttgcgtacaatacaccaaatggtgggatcccttcccgaaccttgtgtatgcgggagcttta 19977733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 95 - 219
Target Start/End: Original strand, 10546153 - 10546279
Alignment:
Q  95 atgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnn--cagggtaaggttgcatgcaatacaccaaatggtgggaccccttc 192  Q
    ||||||||| ||||||||||||||||||||| |||||| |||| |||         |||||||||| ||| | |||||||||||||||||||||||||||    
T  10546153 atgtgactgaaaggtcacgggttcaagtcctggaaacatcctcttgtataaaaaaacagggtaaggctgcgtacaatacaccaaatggtgggaccccttc 10546252  T
Q  193 ccgaatcctgcatatgcgagagcttta 219  Q
    ||| | ||||| |||||| ||||||||    
T  10546253 ccggaccctgcgtatgcgggagcttta 10546279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 192
Target Start/End: Complemental strand, 99421 - 99311
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||       || || |||| ||| | |||||||||||||||    
T  99421 gtaaagttgttgtcacgtgactgaaaggtcacgggttcaagtcctagaaacagcctcttgt-aaaaaacatggcaaggctgcgtacaatacaccaaatgg 99323  T
Q  181 tgggaccccttc 192  Q
    ||| ||||||||    
T  99322 tggaaccccttc 99311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 17380391 - 17380257
Alignment:
Q  84 aagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgg 183  Q
    |||||||||||||||||| | ||||||||||||||||||| | |||||| |||| |||       |||||||||||||  |||||||||||||||| |||    
T  17380391 aagttgttgtcatgtgaccgaaaggtcacgggttcaagtcttggaaacaacctcttgtgtataaacagggtaaggttgtgtgcaatacaccaaatgatgg 17380292  T
Q  184 gaccccttcccgaatcctgcatatgcgagagcttt 218  Q
     ||||||||| | | |||||  ||||| |||||||    
T  17380291 aaccccttcctggaccctgcggatgcgggagcttt 17380257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 81 - 218
Target Start/End: Complemental strand, 21377231 - 21377093
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||| |||||||| |||| |||        |||||||||| ||  | |||| |||||||||    
T  21377231 gtaaagttgttgtcatgtgactgaaaggttacgagttcaagtcatagaaacatcctcttgtgtaaaaaacagggtaaggctgggtacaatgcaccaaatg 21377132  T
Q  180 gtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||||||||||||||||| ||||| |||| | |||||||    
T  21377131 gtgggaccccttcccgaaccctgcgtatgtgggagcttt 21377093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 39914475 - 39914325
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaaggttgcatgca 167  Q
    ||||||| || ||||||||||||||||||||||| ||||||||||| |||||| || |||||| ||||  ||||       |||||||||| ||  | ||    
T  39914475 tggcgcatctggtaaagttgttgtcatgtgactggaaggtcacgggatcaagtactggaaacaacctcttgtgtaaaaaaacagggtaaggatgtgtaca 39914376  T
Q  168 atacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||| |||||||||||||||||| | | ||||| |||||| ||||||||    
T  39914375 atacaccgaatggtgggaccccttcctg-accctgcgtatgcgggagcttta 39914325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 183
Target Start/End: Original strand, 27573581 - 27573700
Alignment:
Q  64 taaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgca 163  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||||||  |||||||||||  | ||||||||| |||       || ||||||| |||     
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcattggttcaagtccgggcaacagcctcttgtgtataaacatggtaaggctgcg 27573680  T
Q  164 tgcaatacaccaaatggtgg 183  Q
    | ||||||||||||||||||    
T  27573681 tacaatacaccaaatggtgg 27573700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 5450263 - 5450376
Alignment:
Q  82 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    |||||||||||||||||||||| |||||||||||||||| |||| |||||| ||||  ||||       || ||||||| ||| | |||||||||||| |    
T  5450263 taaagttgttgtcatgtgactgaaaggtcacgggttcaattcctggaaacaacctcttgtgtaaaaaaacatggtaaggctgcgtacaatacaccaaagg 5450362  T
Q  180 gtgggaccccttcc 193  Q
    ||||||||||||||    
T  5450363 gtgggaccccttcc 5450376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 7214488 - 7214563
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag 133  Q
    ||||||||||  |||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||| | |||||||    
T  7214488 gaggggtaactttggcacaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcttggaaacag 7214563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 220
Target Start/End: Complemental strand, 31821491 - 31821361
Alignment:
Q  89 gttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatggtgggaccc 188  Q
    ||||| ||||||||| ||||||||| ||||||||| |||||||||||  ||||        ||||||||||||  | |||||||||||||| ||||||||    
T  31821491 gttgttatgtgactgaaaggtcacgagttcaagtcgtagaaacagccgtgtgtaaaaaat-agggtaaggttgtgtacaatacaccaaatgatgggaccc 31821393  T
Q  189 cttcccgaatcctgcatatgcgagagctttaa 220  Q
    ||| ||||| ||||  |||||| |||||||||    
T  31821392 ctttccgaaacctgtgtatgcgggagctttaa 31821361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 40417029 - 40416973
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||    
T  40417029 gtaaagttgttgtcatgtgactggaaggtcacgggttcaagtcatggaaacaacctc 40416973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 44604832 - 44604887
Alignment:
Q  82 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||    
T  44604832 taaagttgttgtcatgtgactggaaggtcacaggttcaagtcctggaaacaacctc 44604887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 59 - 137
Target Start/End: Original strand, 14544018 - 14544096
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||| |||||||| | ||||||||||||||||||||||| ||||| || ||| || || || |||||||||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgtgactgaaaggttacaggtccaggtactggaaacagcctc 14544096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 36871538 - 36871607
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  36871538 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccgga-cctgcgtatgcgggagcttta 36871607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 103
Target Start/End: Complemental strand, 39189603 - 39189557
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactg 103  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||    
T  39189603 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactg 39189557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 26684803 - 26684638
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag-cctc--gtgtnnnnnnncagggt 154  Q
    ||||||||||  | |||||||| |||||||||||||||||||| || |||||||  |||| |||||||  |||||| ||||  ||||        | |||    
T  26684803 gaggggtaactttagcgcaactggtaaagttgttgtcatgtgattgaaaggtcaaaggtttaagtcctgaaaacagacctcttgtgtaaaaaaatatggt 26684704  T
Q  155 aaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    |||| ||| | ||||| || ||||||||||||| ||||||||| ||||| |||||| |||||||||    
T  26684703 aaggctgcgtacaatatactaaatggtgggacctcttcccgaaccctgcgtatgcgggagctttaa 26684638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 24860155 - 24860007
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaat 169  Q
    |||||||||| ||||| ||||||||||||||||| ||||| ||||||| ||| ||| |||||| ||||  ||       || ||| ||| ||| | ||||    
T  24860155 tggcgcaactggtaaaattgttgtcatgtgactggaaggttacgggtttaagccctggaaacaacctctggtgtaaaaacatggt-aggctgcgtacaat 24860057  T
Q  170 acaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||| | |||||||| || | ||||| |||||| ||||||||    
T  24860056 acaccaaatggtagaaccccttctcggaccctgcgtatgcgggagcttta 24860007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 219
Target Start/End: Complemental strand, 31158598 - 31158458
Alignment:
Q  82 taaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtg-tnnnnnnncagggtaaggttgcatgcaatacacc--aaat 178  Q
    |||||||||||||||||||||| ||||||| ||||| ||||| |  |||||||||| ||         ||||||||| |||||| ||||| |||  ||||    
T  31158598 taaagttgttgtcatgtgactgaaaggtcaagggttaaagtcttcaaaacagcctcttgcgtaaaaaacagggtaagattgcatacaataaaccaaaaat 31158499  T
Q  179 ggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||  | ||||| |||||| ||||||||    
T  31158498 ggtgggaccccttcccagaccctgcgtatgcgggagcttta 31158458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 45235976 - 45235924
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag 133  Q
    ||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||    
T  45235976 gtaaagttgttctcatgtgactgaaagatcacgagttcaagtcctagaaacag 45235924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 81 - 208
Target Start/End: Complemental strand, 4516509 - 4516381
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    ||||||||||||||| ||||||| ||||||||   ||||||| |||||||||||||| |||        ||||| || | ||| | ||||||||||| ||    
T  4516509 gtaaagttgttgtcacgtgactgaaaggtcacatattcaagttctagaaacagcctcttgtgtaaaaaacagggcaacgctgcgtacaatacaccaattg 4516410  T
Q  180 gtgggaccccttcccgaatcctgcatatg 208  Q
    |||||||||||||||| | ||||| ||||    
T  4516409 gtgggaccccttcccggaccctgcgtatg 4516381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 152 - 219
Target Start/End: Original strand, 24890460 - 24890527
Alignment:
Q  152 ggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||| ||||| ||||||||||| |||||||||||||||||| | ||||| |||||  ||||||||    
T  24890460 ggtaaggctgcatacaatacaccaattggtgggaccccttcccggaccctgcgtatgcaggagcttta 24890527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 59 - 136
Target Start/End: Original strand, 17472926 - 17473003
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcct 136  Q
    |||||||||| || |||||||  ||||||||||||||  ||| || ||||||||||||||| ||| |||||| |||||    
T  17472926 aggggtaaccttgacgcaactaataaagttgttgtcaaatgattgaaaggtcacgggttcaggtcttagaaatagcct 17473003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Original strand, 4794871 - 4794915
Alignment:
Q  172 accaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||| ||||||||||||||| |||||||||||||| |||||    
T  4794871 accaaatgatgggaccccttcccggatcctgcatatgcgggagct 4794915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 19614981 - 19615025
Alignment:
Q  93 tcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||    
T  19614981 tcatgtgactgaaaggtcacgggttcaagtccttgaaacatcctc 19615025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 175 - 219
Target Start/End: Original strand, 23488555 - 23488599
Alignment:
Q  175 aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||    
T  23488555 aaatggtgggaccccttcccggaccctgcgtatgcgagagcttta 23488599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 29420047 - 29419991
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||||||  |||||| ||||||||| ||||||||||| |||||| ||||    
T  29420047 gtaaagttgttgtcacatgactgaaaggtcacgagttcaagtcctggaaacaacctc 29419991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 33795262 - 33795318
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| |||| || ||||||||||||||||||||  |||||| ||||    
T  33795262 gtaaagttgttgtcacgtgattgaaaggtcacgggttcaagtcccggaaacaacctc 33795318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 44643499 - 44643555
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||  ||||||||||| ||||||||| |||||||| ||||||| ||||||    
T  44643499 gtaaagttgtcatcatgtgactgaaaggtcacgtgttcaagttctagaaagagcctc 44643555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 31523296 - 31523347
Alignment:
Q  168 atacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||||| |||| ||||| || |||||||||||| ||||||||    
T  31523296 atacaccaaatggtggaaccctttcccaaaccctgcatatgcgggagcttta 31523347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 81 - 135
Target Start/End: Original strand, 35017794 - 35017849
Alignment:
Q  81 gtaaagttgttgtcatgtgac-tgtaaggtcacgggttcaagtcctagaaacagcc 135  Q
    ||||||||||||||||||||| || ||||||||||||| |||||||  ||||||||    
T  35017794 gtaaagttgttgtcatgtgacttgaaaggtcacgggtttaagtcctgaaaacagcc 35017849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Original strand, 1289095 - 1289137
Alignment:
Q  176 aatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||||||||||||||||||| ||| |||||||||| |||||||    
T  1289095 aatggtgggaccccttcccggatcatgcatatgcgggagcttt 1289137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 103
Target Start/End: Complemental strand, 27466299 - 27466266
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactg 103  Q
    |||||||||| |||||||||||||||||||||||    
T  27466299 tggcgcaactggtaaagttgttgtcatgtgactg 27466266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 219
Target Start/End: Original strand, 30826083 - 30826151
Alignment:
Q  150 agggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||| | |||||||||||||||| ||| ||||||||  | ||| |||||||| ||||||||    
T  30826083 agggtaaggttgcgtacaatacaccaaatggt-ggaacccttcccagaccctacatatgcgggagcttta 30826151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 32781377 - 32781332
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttccc 194  Q
    |||||||||  ||| | |||||||||||||||||||||||||||||    
T  32781377 cagggtaagactgcgtacaatacaccaaatggtgggaccccttccc 32781332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 39499302 - 39499249
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||| |||||||||||| |||||  |||||||||| |||||| ||||||||    
T  39499302 caatacatcaaatggtgggatcccttttcgaatcctgcgtatgcgggagcttta 39499249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 201
Target Start/End: Original strand, 4252656 - 4252688
Alignment:
Q  169 tacaccaaatggtgggaccccttcccgaatcct 201  Q
    ||||||||||||||||||||||||||| |||||    
T  4252656 tacaccaaatggtgggaccccttcccggatcct 4252688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 217
Target Start/End: Original strand, 41409936 - 41409976
Alignment:
Q  177 atggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    ||||||||||||||||||| | |||||||||||| ||||||    
T  41409936 atggtgggaccccttcccggaccctgcatatgcgggagctt 41409976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 85; Significance: 2e-40; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 1346918 - 1347075
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| | |||       |||||||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagccacttgt-gtaaaacagggtaag 1347016  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  1347017 gctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 1347075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 58 - 216
Target Start/End: Complemental strand, 1354936 - 1354779
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||       |||||||||    
T  1354936 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcactggttcaagtcctggaaacagcctcttgt-gtaaaacagggtaag 1354838  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  1354837 gctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 1354779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 70 - 218
Target Start/End: Complemental strand, 12222086 - 12221935
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaa 168  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||||||||| |||        |||||||||| ||| | |||    
T  12222086 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaacagcctcttgtgtaaaaaacagggtaaggctgcgtacaa 12221987  T
Q  169 tacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttt 218  Q
    |||||||  |||||||||||||||||||| | ||||| |||||| |||||||    
T  12221986 tacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttt 12221935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 56 - 219
Target Start/End: Complemental strand, 29356041 - 29355874
Alignment:
Q  56 ctgaggggtaaccctggcgcaactcgtaaag-ttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncaggg 153  Q
    ||||||||||||| |||| ||||| |||||  ||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||    
T  29356041 ctgaggggtaaccttggcacaactggtaaaaattgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtgtaagaaacaggg 29355942  T
Q  154 taaggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||| ||| | ||||||||||  |||||||||||||||||||| | ||||| |||||| ||||||||    
T  29355941 taaggctgcgtacaatacaccaataatggtgggaccccttcccggaccctgcgtatgcgggagcttta 29355874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 3815256 - 3815183
Alignment:
Q  60 ggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag 133  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| || |||||||||||||||||| |||||||    
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaatgtcacgggttcaagtcctggaaacag 3815183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 137
Target Start/End: Original strand, 8409196 - 8409276
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||||| |||||||||| ||||||||||||| ||||||||| |||||||||| |||||||||| ||||| |||||    
T  8409196 tgaggggtaaccttggcgcaactggtaaagttgttgtaatgtgactgaaaggtcacggattcaagtcctggaaactgcctc 8409276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 219
Target Start/End: Original strand, 9161076 - 9161240
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaa 156  Q
    |||||||||||| || |||||   ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||       ||| ||||    
T  9161076 tgaggggtaaccttgacgcaatcggtaaagttgttgtcatgtgactgaaaggtcacaggttcaagtcctggaaacagcctcttgtgtaaaaacagagtaa 9161175  T
Q  157 ggttgcatgcaatacacca--aatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    || ||| | ||||||| ||  ||||||||||||||||| || | ||||| ||||||  |||||||    
T  9161176 ggctgcgtacaatacatcaataatggtgggaccccttctcggaccctgcgtatgcggaagcttta 9161240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 137
Target Start/End: Complemental strand, 14975262 - 14975182
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||| ||||| |||||||||  ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||    
T  14975262 tgagggataaccttggcgcaaccggtaaagttgttgtcatgtgactggaaggtcacggattcaagtcctggaaacagcctc 14975182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 2166579 - 2166453
Alignment:
Q  72 gcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaata 170  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |||| |||        |||| ||||||||| | |||||    
T  2166579 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaata 2166480  T
Q  171 cacca--aatggtgggaccccttcccg 195  Q
    |||||  ||||||||||||||||||||    
T  2166479 caccaataatggtgggaccccttcccg 2166453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 72 - 195
Target Start/End: Complemental strand, 2178212 - 2178086
Alignment:
Q  72 gcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaata 170  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| |||||| |||| |||        |||| ||||||||| | |||||    
T  2178212 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctcttgtgtaaaatacaggataaggttgcgtacaata 2178113  T
Q  171 cacca--aatggtgggaccccttcccg 195  Q
    |||||  ||||||||||||||||||||    
T  2178112 caccaataatggtgggaccccttcccg 2178086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 33923009 - 33922936
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaac 131  Q
    ||||||||||| |||||||||  |||||||||||||||| |||||| || ||||| ||||||||||||||||||    
T  33923009 gaggggtaaccttggcgcaaccggtaaagttgttgtcatttgactgaaaagtcacaggttcaagtcctagaaac 33922936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 6024202 - 6024266
Alignment:
Q  73 cgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||| |||||||||||||||||||| || |||||||||| ||||| ||||||||||||||||    
T  6024202 cgcaactggtaaagttgttgtcatgtgattggaaggtcacggtttcaaatcctagaaacagcctc 6024266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 61 - 137
Target Start/End: Original strand, 12063424 - 12063500
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||| ||| ||||||  |||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||    
T  12063424 gggtaaccttggtgcaactgataaagttgttatcatgagactgaaaggtcacgggttcaagtcctagaaatagcctc 12063500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 58 - 137
Target Start/End: Complemental strand, 15866218 - 15866139
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||| |||| ||||| |||||||||||| ||||||| || ||||||| |||||||| |||| |||||||||||    
T  15866218 gaggggtaaccttggcccaactggtaaagttgttggcatgtgattgaaaggtcatgggttcaattcctggaaacagcctc 15866139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 203
Target Start/End: Complemental strand, 13905158 - 13905015
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaag 157  Q
    ||||| |||| |||||||||  ||||||||||||||||||||||| ||||||||||| |||||||||  ||||  |||| |||        |||||||||    
T  13905158 agggggaaccttggcgcaacg-gtaaagttgttgtcatgtgactgaaaggtcacgggctcaagtcctgaaaacgacctcttgtgtaaaaaacagggtaag 13905060  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgc 203  Q
    | ||||| |||| ||||||||||| |||||| |||||||| |||||    
T  13905059 gctgcatacaattcaccaaatggt-ggaccctttcccgaaccctgc 13905015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 20400625 - 20400685
Alignment:
Q  62 ggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagt 122  Q
    ||||||| |||||||| | ||| ||||||||||||||||||| |||||||| |||||||||    
T  20400625 ggtaaccttggcgcaattggtatagttgttgtcatgtgactgaaaggtcacaggttcaagt 20400685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 82 - 194
Target Start/End: Original strand, 28007604 - 28007717
Alignment:
Q  82 taaagttgttgtcatgtgac-tgtaa-ggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatg 179  Q
    |||||||||||||||||||| || || ||||||||||||||||||| |||| |||||| |||       |||||| ||| ||| | ||||||||||||||    
T  28007604 taaagttgttgtcatgtgacatgaaaaggtcacgggttcaagtcctggaaagagcctcttgt-gtaaaacagggtcaggctgcgtacaatacaccaaatg 28007702  T
Q  180 gtgggaccccttccc 194  Q
     ||||||||||||||    
T  28007703 ctgggaccccttccc 28007717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 58 - 189
Target Start/End: Original strand, 1941809 - 1941941
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaa 156  Q
    ||||||||||| ||| |||||| |||||||||||||||| |||||| |||||| ||| || ||||| |  ||||| |||| |||        ||||||||    
T  1941809 gaggggtaaccttggtgcaactggtaaagttgttgtcatctgactggaaggtcgcggattgaagtcatgtaaacaacctcttgtgtaaaaaacagggtaa 1941908  T
Q  157 ggttgcatgcaatacaccaaatggtgggacccc 189  Q
    || ||| | ||||||||| ||||||||||||||    
T  1941909 ggctgcgtacaatacaccgaatggtgggacccc 1941941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 132
Target Start/End: Original strand, 22967124 - 22967199
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 132  Q
    |||||||||||| | ||||| ||  ||||||| |||||||||||||||||||||||  ||||||||| | ||||||    
T  22967124 tgaggggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaaca 22967199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 23821269 - 23821194
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 132  Q
    |||||||||||| | ||||| ||  ||||||| |||||||||||||||||||||||  ||||||||| | ||||||    
T  23821269 tgaggggtaaccttcgcgcatctgataaagttattgtcatgtgactgtaaggtcactagttcaagtcatggaaaca 23821194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 70 - 137
Target Start/End: Original strand, 24734599 - 24734666
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||||| ||||||||||||||||||||||| |||||||   |||||| |||| |||||| ||||    
T  24734599 tggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaaaagttcaaatccttgaaacaacctc 24734666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 26097204 - 26097271
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||||| ||| | ||||||||||||||  |||||||||||||| | |||||||||||| |||||    
T  26097204 cagggtaaggctgcgtacaatacaccaaatgaagggaccccttcccggaccctgcatatgcgggagct 26097271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 32579488 - 32579541
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||| ||||||||||||||||||||||  | |||||||||||| ||||||||    
T  32579488 caataccccaaatggtgggaccccttcccagaccctgcatatgcgggagcttta 32579541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 130
Target Start/End: Original strand, 14553482 - 14553537
Alignment:
Q  74 gcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaa 130  Q
    |||||| ||||||||||||||||||||||  |||||||| |||||||||||| ||||    
T  14553482 gcaactggtaaagttgttgtcatgtgact-aaaggtcacaggttcaagtcctggaaa 14553537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 74 - 133
Target Start/End: Original strand, 8417442 - 8417501
Alignment:
Q  74 gcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacag 133  Q
    |||||| ||||||||||||||||||||||| || |||||| ||||| ||| | |||||||    
T  8417442 gcaactggtaaagttgttgtcatgtgactgaaatgtcacgagttcaggtcatggaaacag 8417501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 13267788 - 13267839
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagctt 217  Q
    |||||||||||||||||||||||||||| | | ||||| |||||| ||||||    
T  13267788 caatacaccaaatggtgggaccccttcctggaccctgcgtatgcgggagctt 13267839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 149 - 216
Target Start/End: Original strand, 25557769 - 25557836
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||||| ||| | ||||||||||||||  || ||||||||||| | |||||||||||| |||||    
T  25557769 cagggtaaggctgcgtacaatacaccaaatgaaggaaccccttcccggaccctgcatatgcgggagct 25557836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 11395827 - 11395877
Alignment:
Q  170 acaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||| |||||||||||||||||| ||||||| |||||| ||||||||    
T  11395827 acaccaaagtggtgggaccccttcccggatcctgcgtatgcgggagcttta 11395877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 3815149 - 3815096
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||||||||| |||||||| ||| | ||||||  |||||||    
T  3815149 caatacaccaaatggtgggaccctttcccgaaccctacgtatgcggaagcttta 3815096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 14975165 - 14975109
Alignment:
Q  165 gcaatacaccaa--atggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||  ||||||||||||||||||||| || ||||||||| ||| ||||    
T  14975165 gcaatacaccaataatggtgggaccccttcccgaaccccgcatatgcgggagtttta 14975109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 23930199 - 23930146
Alignment:
Q  166 caatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||| |||||||||||||||| || | ||||| |||||| ||||||||    
T  23930199 caatacaccagatggtgggaccccttcacggaccctgcttatgcgggagcttta 23930146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 24734688 - 24734759
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaat--ggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||| | ||||||| ||||   ||||||||||||||||| ||||||| |||||| ||||||||    
T  24734688 cagggtaaggttgcgtacaatacaacaaaaaaggtgggaccccttcccggatcctgcgtatgcg-gagcttta 24734759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 122
Target Start/End: Complemental strand, 32728314 - 32728273
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagt 122  Q
    ||||||||||||||||||||||| |||||||| | |||||||    
T  32728314 gtaaagttgttgtcatgtgactgaaaggtcacagattcaagt 32728273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 137
Target Start/End: Original strand, 12889403 - 12889459
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    ||||||||||||||| |||| || |||||||| |||||||||| |  ||||||||||    
T  12889403 gtaaagttgttgtcacgtgagtgaaaggtcacaggttcaagtcttgaaaacagcctc 12889459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 195
Target Start/End: Complemental strand, 15866110 - 15866082
Alignment:
Q  167 aatacaccaaatggtgggaccccttcccg 195  Q
    |||||||||||||||||||||||||||||    
T  15866110 aatacaccaaatggtgggaccccttcccg 15866082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 19649336 - 19649292
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgg 114  Q
    ||||||||||  |||||||||||||||||||||| ||| ||||||    
T  19649336 tggcgcaactgataaagttgttgtcatgtgactgaaagatcacgg 19649292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 23930303 - 23930247
Alignment:
Q  62 ggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttc 118  Q
    ||||||| ||||||||||| ||||| |||||||||||| ||  ||||||||| ||||    
T  23930303 ggtaaccttggcgcaactcataaagatgttgtcatgtgtctcaaaggtcacgagttc 23930247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 58 - 216
Target Start/End: Original strand, 30533 - 30690
Alignment:
Q  58 gaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaag 157  Q
    ||||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||       ||||||| |    
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgt-gtaaaacagggtagg 30631  T
Q  158 gttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    | ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  30632 gctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 30690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 67; Significance: 1e-29; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 10226 - 10079
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggtt 160  Q
    |||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       ||| |||||  |    
T  10226 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacagagtaagact 10128  T
Q  161 gcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgc 209  Q
    || | ||||||||||||| |||||||||||||||| | |||||||||||    
T  10127 gcgtacaatacaccaaatagtgggaccccttcccggaccctgcatatgc 10079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 20554 - 20407
Alignment:
Q  61 gggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggtt 160  Q
    |||||||| || ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||       ||| |||||  |    
T  20554 gggtaaccttgacgcaactggtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacagagtaagact 20456  T
Q  161 gcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgc 209  Q
    || | ||||||||||||| |||||||||||||||| | |||||||||||    
T  20455 gcgtacaatacaccaaatagtgggaccccttcccggaccctgcatatgc 20407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 8898 - 8964
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 123  Q
    |||||||||||| |||||||||  || |||||||||||||||||||| || ||||| ||||||||||    
T  8898 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 8964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 19226 - 19292
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtc 123  Q
    |||||||||||| |||||||||  || |||||||||||||||||||| || ||||| ||||||||||    
T  19226 tgaggggtaaccttggcgcaaccggtgaagttgttgtcatgtgactgaaatgtcacaggttcaagtc 19292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 67; Significance: 1e-29; HSPs: 5)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 57 - 219
Target Start/End: Complemental strand, 24949 - 24791
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggta 155  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||     ||||||||| |||        |||||||    
T  24949 tgaggggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtc-----aacagcctcttgtgtaaaaaacagggta 24855  T
Q  156 aggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| ||| | ||| |||||||||||||||||||||||||||| ||||| |||||| ||||||||    
T  24854 aggctgcgtacaacacaccaaatggtgggaccccttcccgaaccctgcgtatgcgggagcttta 24791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 46797 - 46947
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnnc-agggtaaggttgcatgcaa 168  Q
    |||||||| | ||||||||||||||||||||||  |||||||||||||||||| || |||||| |||| |||         ||||||||||||| | |||    
T  46797 tggcgcaattggtaaagttgttgtcatgtgactagaaggtcacgggttcaagtgctggaaacaacctcttgtgtaaaaaatagggtaaggttgcgtacaa 46896  T
Q  169 tacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  46897 tacaccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 46947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 47041 - 46997
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcct 125  Q
    ||||||||||||||| ||||||| ||||||||| |||||||||||    
T  47041 gtaaagttgttgtcaggtgactgaaaggtcacgagttcaagtcct 46997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 46796 - 46725
Alignment:
Q  150 agggtaaggttgcatgcaatacaccaaa-tggtgggaccccttcccgaatcctgcatatgcgagagctttaa 220  Q
    ||||||||| ||||| ||||| |||||| |||||||||||||||||  | ||||| |||||| |||||||||    
T  46796 agggtaaggatgcatacaatataccaaaatggtgggaccccttcccagaccctgcgtatgcgggagctttaa 46725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 216
Target Start/End: Original strand, 43706 - 43771
Alignment:
Q  152 ggtaaggttgcatgcaatacaccaaatggtgggacccc-ttcccgaatcctgcatatgcgagagct 216  Q
    ||||||| ||| | |||||||||||||||||||||||| ||| || | |||||||||||| |||||    
T  43706 ggtaaggctgcgtacaatacaccaaatggtgggacccctttctcggaccctgcatatgcgggagct 43771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 56 - 187
Target Start/End: Complemental strand, 226589 - 226456
Alignment:
Q  56 ctgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncaggg 153  Q
    ||||| ||||||| |||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||  || |       |||||    
T  226589 ctgagtggtaaccttggcgcaactggtaaagttgttgtcatgtgactgaaaggtcacggattcaagtcctagaaacagcctcttgtctaaaaaaacaggg 226490  T
Q  154 taaggttgcatgcaatacaccaaatggtgggacc 187  Q
    ||||| ||||| ||||||| ||||||||||||||    
T  226489 taaggctgcatacaatacatcaaatggtgggacc 226456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 60 - 219
Target Start/End: Complemental strand, 13202 - 13043
Alignment:
Q  60 ggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggt 159  Q
    ||||||||| |||||||||  ||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| ||        || |||||||     
T  13202 ggggtaaccttggcgcaaccggtaaagttgttgtcatgtgactgaaaggtcaccggttcaagtcctggaaacagcctcttgcgtaaaaacaaggtaaggc 13103  T
Q  160 tgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||| | ||||||||| |||||||||||||||||||  | ||||| |||||| | ||||||    
T  13102 tgcgtacaatacaccgaatggtgggaccccttcccagaccctgcgtatgcgggggcttta 13043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 65 - 216
Target Start/End: Original strand, 11093 - 11242
Alignment:
Q  65 aaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcat 164  Q
    |||| |||||||||| ||||||||||| | ||||||||| ||||||||||||||||||||| ||||||||||| |||       ||  |||||| ||| |    
T  11093 aaccttggcgcaactggtaaagttgttct-atgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgt-gtaaaacaaagtaaggctgctt 11190  T
Q  165 gcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
     ||||||||||||||||||||| |||||||| | |||||||||||| |||||    
T  11191 acaatacaccaaatggtgggacaccttcccggaccctgcatatgcgggagct 11242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 57 - 132
Target Start/End: Original strand, 83828 - 83903
Alignment:
Q  57 tgaggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 132  Q
    |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | ||||||    
T  83828 tgaggggtaaccttggcgcaactagtaaagttgttgtcatgtgactgaaaggtcacgggttcaagtcttggaaaca 83903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 74 - 219
Target Start/End: Original strand, 10780 - 10926
Alignment:
Q  74 gcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttgcatgcaataca 172  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||  ||  ||||| |||| |||        ||||||| || ||| | |||||||    
T  10780 gcaactggtaaagttgttgtcatgtgactggaaggtcacgggttcaaggtctgaaaacaacctcttgtgtaaaaaacagggtagggctgcgtccaataca 10879  T
Q  173 ccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||||||||||| | ||||| |||||| ||||||||    
T  10880 ccaaatggtgggaccccttcccggaccctgcgtatgcgggagcttta 10926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 81 - 219
Target Start/End: Complemental strand, 1743 - 1606
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgtnnnnnnncagggtaaggttgcatgcaatacaccaaatgg 180  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||  ||||| |||| |||       |||| ||||| ||||| ||||||||||||||     
T  1743 gtaaagttgttgtcatgtgactgaaaggtcatgggttcaagtcctgaaaacaacctcttgt-gtaaaacaggataaggctgcatacaatacaccaaatga 1645  T
Q  181 tgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    ||||||||||||||| | || || |||||| ||||||||    
T  1644 tgggaccccttcccggacccggcgtatgcgggagcttta 1606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 24619 - 24695
Alignment:
Q  59 aggggtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcc 135  Q
    |||||||||| |||| ||| |  |||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  24619 aggggtaaccttggcacaattgataaagttgttgtcaagtgactgtaaggtcacgggttcaagtcctggaaacagcc 24695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 219
Target Start/End: Original strand, 58936 - 59095
Alignment:
Q  63 gtaaccctggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctcgtgt-nnnnnnncagggtaaggttg 161  Q
    |||||| ||| |||||| ||||| || |||||||||||||| ||||||||||||||||||||| ||||||||||| |||        |||||||||  ||    
T  58936 gtaaccttggagcaactggtaaacttattgtcatgtgactgaaaggtcacgggttcaagtcctggaaacagcctcttgtataaaaaacagggtaagactg 59035  T
Q  162 catgcaatacacc--aaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    | | |||||||||  ||||||||||||||||||||  |  |||| |||||| ||||||||    
T  59036 cgtacaatacaccaaaaatggtgggaccccttcccagactctgcgtatgcgggagcttta 59095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 74 - 193
Target Start/End: Complemental strand, 35184 - 35062
Alignment:
Q  74 gcaactcgtaaagttg-ttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc--gtgtnnnnnnncagggtaaggttgcatgcaata 170  Q
    |||||| ||||||||  ||||||||||||||||||||||||||||||||||||  |||||| |||  ||||       |||||||||| ||| | |||||    
T  35184 gcaactggtaaagtttattgtcatgtgactgtaaggtcacgggttcaagtcctgaaaacagtctcttgtgtgtgaaaacagggtaaggctgcgtacaata 35085  T
Q  171 caccaaatggtgggaccccttcc 193  Q
    |||||||||||||||||| ||||    
T  35084 caccaaatggtgggaccctttcc 35062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 4125 - 4190
Alignment:
Q  72 gcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||| |||||| ||||    
T  4125 gcgcaactagtaaagttgttgttatgtgactgaaaggtcacgggttcaagtcctggaaacaacctc 4190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 149 - 216
Target Start/End: Complemental strand, 48723 - 48656
Alignment:
Q  149 cagggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||||| ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  48723 cagggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 48656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 151 - 216
Target Start/End: Complemental strand, 24220 - 24155
Alignment:
Q  151 gggtaaggttgcatgcaatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagct 216  Q
    |||||||| ||| | |||||||||||||||||||||||||||||| | |||||||||||| |||||    
T  24220 gggtaaggctgcgtacaatacaccaaatggtgggaccccttcccggaccctgcatatgcgggagct 24155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 72 - 137
Target Start/End: Original strand, 43097 - 43162
Alignment:
Q  72 gcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaacagcctc 137  Q
    |||||||| |||||||| ||||||||||| || ||||||||| ||||| |||||||||||||||||    
T  43097 gcgcaactggtaaagttattgtcatgtgattgaaaggtcacgagttcaggtcctagaaacagcctc 43162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 8868 - 8919
Alignment:
Q  81 gtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca 132  Q
    |||||||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  8868 gtaaagttgttgtcatgtgactgtaaggtcacaggttcaattcctggaaaca 8919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 219
Target Start/End: Complemental strand, 73030 - 72886
Alignment:
Q  70 tggcgcaactcgtaaagttgttgtcatgtgactgtaaggtcacgggttcaagtcctagaaaca-gcctcgtgtnnnnnnn-cagggtaaggttgcatgca 167  Q
    |||||||||| |||||||||||||||||||        ||||||||||||||||||||||||| | ||| |||        || ||||||| ||| | ||    
T  73030 tggcgcaactggtaaagttgttgtcatgtgt-------gtcacgggttcaagtcctagaaacaagtctcttgtgtaaaaaacacggtaaggctgcctaca 72938  T
Q  168 atacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||||||||| | ||||||||||| | ||||| |||||| ||||||||    
T  72937 atacaccaaatggtagtaccccttcccggaacctgcgtatgcgggagcttta 72886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 3608 - 3660
Alignment:
Q  167 aatacaccaaatggtgggaccccttcccgaatcctgcatatgcgagagcttta 219  Q
    |||||||| |||| ||||||||||||||||| ||||| ||||||  |||||||    
T  3608 aatacaccgaatgatgggaccccttcccgaaccctgcgtatgcggcagcttta 3660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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