View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17856_low_10 (Length: 274)

Name: NF17856_low_10
Description: NF17856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17856_low_10
NF17856_low_10
[»] chr8 (44 HSPs)
chr8 (60-232)||(8054875-8055060)
chr8 (176-230)||(9992656-9992710)
chr8 (174-232)||(16937406-16937464)
chr8 (178-229)||(31874077-31874128)
chr8 (174-229)||(44295305-44295360)
chr8 (174-228)||(10042750-10042804)
chr8 (174-230)||(9270010-9270066)
chr8 (233-274)||(32104841-32104882)
chr8 (174-230)||(15665528-15665584)
chr8 (174-228)||(37658955-37659009)
chr8 (233-274)||(41996615-41996656)
chr8 (174-230)||(36545850-36545906)
chr8 (179-230)||(5989624-5989675)
chr8 (174-228)||(32256792-32256847)
chr8 (233-274)||(8054810-8054852)
chr8 (122-207)||(1810337-1810421)
chr8 (122-197)||(12329556-12329628)
chr8 (174-227)||(26937514-26937567)
chr8 (242-274)||(5457150-5457182)
chr8 (177-217)||(14115875-14115914)
chr8 (174-230)||(14530977-14531033)
chr8 (174-218)||(27534480-27534524)
chr8 (129-185)||(41996511-41996567)
chr8 (235-274)||(16996891-16996930)
chr8 (178-228)||(7269535-7269585)
chr8 (233-271)||(9270091-9270129)
chr8 (112-166)||(9501503-9501557)
chr8 (174-232)||(13977390-13977448)
chr8 (180-230)||(15237706-15237756)
chr8 (179-232)||(23766736-23766787)
chr8 (233-274)||(3680993-3681034)
chr8 (233-274)||(5989700-5989741)
chr8 (177-230)||(11655979-11656032)
chr8 (233-274)||(31147804-31147845)
chr8 (117-166)||(31202371-31202420)
chr8 (233-274)||(36545784-36545825)
chr8 (233-274)||(44295386-44295427)
chr8 (178-230)||(284544-284596)
chr8 (178-230)||(631281-631333)
chr8 (178-230)||(817093-817145)
chr8 (174-230)||(14327468-14327524)
chr8 (180-208)||(31147891-31147919)
chr8 (174-226)||(32061783-32061835)
chr8 (174-230)||(32920641-32920697)
[»] chr2 (45 HSPs)
chr2 (111-232)||(7640423-7640544)
chr2 (178-230)||(5930416-5930468)
chr2 (174-229)||(3390421-3390476)
chr2 (174-229)||(25771434-25771489)
chr2 (174-232)||(6089882-6089940)
chr2 (174-232)||(25516483-25516541)
chr2 (174-232)||(27191402-27191460)
chr2 (174-232)||(27841216-27841274)
chr2 (174-232)||(40125378-40125436)
chr2 (174-232)||(42105819-42105877)
chr2 (174-232)||(44167776-44167834)
chr2 (175-228)||(10589028-10589081)
chr2 (174-232)||(3464948-3465006)
chr2 (174-228)||(15674045-15674099)
chr2 (174-232)||(37883642-37883700)
chr2 (174-228)||(41176851-41176905)
chr2 (174-232)||(43566866-43566922)
chr2 (233-274)||(7640359-7640400)
chr2 (177-229)||(27024209-27024261)
chr2 (178-230)||(29812684-29812736)
chr2 (177-228)||(9715616-9715667)
chr2 (174-229)||(16880029-16880084)
chr2 (174-228)||(19581074-19581128)
chr2 (233-274)||(43929359-43929400)
chr2 (117-216)||(5754207-5754309)
chr2 (112-197)||(41797535-41797617)
chr2 (174-232)||(26491292-26491350)
chr2 (178-232)||(36507924-36507978)
chr2 (233-274)||(5930493-5930534)
chr2 (233-274)||(9715547-9715588)
chr2 (174-230)||(41841938-41841995)
chr2 (174-230)||(25623114-25623170)
chr2 (235-274)||(27191339-27191378)
chr2 (235-274)||(27841153-27841192)
chr2 (235-274)||(43566946-43566985)
chr2 (235-274)||(44167713-44167752)
chr2 (236-274)||(3465030-3465068)
chr2 (233-274)||(3390502-3390543)
chr2 (233-274)||(25771515-25771556)
chr2 (233-274)||(27024142-27024183)
chr2 (174-230)||(5071439-5071495)
chr2 (174-210)||(17037738-17037774)
chr2 (174-206)||(19953373-19953405)
chr2 (129-197)||(34416995-34417063)
chr2 (174-210)||(35353641-35353677)
[»] chr6 (23 HSPs)
chr6 (107-232)||(19759710-19759835)
chr6 (174-229)||(16913317-16913372)
chr6 (174-232)||(12576545-12576603)
chr6 (174-230)||(32457635-32457691)
chr6 (174-230)||(548934-548990)
chr6 (177-228)||(32804286-32804337)
chr6 (174-228)||(4663891-4663945)
chr6 (188-230)||(20845011-20845053)
chr6 (233-274)||(23843427-23843468)
chr6 (174-230)||(13234177-13234232)
chr6 (177-228)||(10744571-10744622)
chr6 (233-272)||(19759858-19759897)
chr6 (188-230)||(15128218-15128260)
chr6 (233-274)||(16913398-16913439)
chr6 (178-230)||(891581-891633)
chr6 (178-230)||(32574446-32574498)
chr6 (178-230)||(33194598-33194650)
chr6 (174-218)||(34020607-34020651)
chr6 (174-216)||(7049236-7049278)
chr6 (232-274)||(33194674-33194716)
chr6 (117-166)||(1302647-1302696)
chr6 (177-210)||(8644237-8644270)
chr6 (233-274)||(13234111-13234152)
[»] chr1 (44 HSPs)
chr1 (107-232)||(21326395-21326520)
chr1 (165-232)||(44562816-44562883)
chr1 (122-232)||(5832164-5832280)
chr1 (174-228)||(52839412-52839466)
chr1 (175-232)||(630852-630909)
chr1 (109-232)||(23320376-23320487)
chr1 (174-230)||(17579757-17579813)
chr1 (174-229)||(6212956-6213011)
chr1 (174-229)||(22344982-22345037)
chr1 (176-230)||(13691827-13691881)
chr1 (233-274)||(23320510-23320551)
chr1 (174-228)||(44514061-44514115)
chr1 (174-228)||(52839510-52839564)
chr1 (174-230)||(14717312-14717367)
chr1 (174-230)||(38646573-38646629)
chr1 (233-272)||(44562754-44562793)
chr1 (184-230)||(45659041-45659087)
chr1 (233-274)||(900192-900233)
chr1 (233-274)||(1768036-1768077)
chr1 (233-274)||(15698270-15698311)
chr1 (174-227)||(46589165-46589217)
chr1 (186-230)||(8893294-8893338)
chr1 (129-197)||(15791607-15791675)
chr1 (122-166)||(51417928-51417972)
chr1 (235-274)||(4564589-4564628)
chr1 (173-228)||(33177667-33177722)
chr1 (175-210)||(48655155-48655190)
chr1 (178-232)||(12148115-12148169)
chr1 (174-219)||(22032169-22032215)
chr1 (232-274)||(27469711-27469753)
chr1 (180-230)||(35077959-35078009)
chr1 (189-227)||(37685168-37685206)
chr1 (189-227)||(37700312-37700350)
chr1 (177-214)||(8937612-8937648)
chr1 (178-230)||(10877338-10877391)
chr1 (233-274)||(15276453-15276494)
chr1 (233-274)||(21326543-21326584)
chr1 (233-274)||(22344915-22344956)
chr1 (117-166)||(28678295-28678344)
chr1 (134-207)||(32784047-32784119)
chr1 (233-274)||(40488400-40488441)
chr1 (233-274)||(45659112-45659153)
chr1 (122-166)||(37825474-37825518)
chr1 (136-216)||(42276298-42276377)
[»] scaffold0722 (2 HSPs)
scaffold0722 (107-232)||(5593-5718)
scaffold0722 (233-274)||(5529-5570)
[»] chr5 (31 HSPs)
chr5 (105-232)||(4726995-4727118)
chr5 (174-230)||(34893985-34894041)
chr5 (174-232)||(28618593-28618651)
chr5 (174-230)||(9035017-9035073)
chr5 (174-229)||(6887248-6887303)
chr5 (174-229)||(31645818-31645873)
chr5 (174-228)||(29310420-29310474)
chr5 (174-228)||(33486641-33486695)
chr5 (175-232)||(4070545-4070601)
chr5 (178-230)||(41358031-41358084)
chr5 (178-230)||(2415393-2415445)
chr5 (181-228)||(18472796-18472843)
chr5 (174-228)||(41554475-41554529)
chr5 (174-227)||(37424982-37425035)
chr5 (174-230)||(19646110-19646166)
chr5 (174-230)||(41988173-41988229)
chr5 (174-229)||(6647983-6648038)
chr5 (233-274)||(4726931-4726972)
chr5 (175-220)||(8812231-8812276)
chr5 (233-274)||(41063399-41063440)
chr5 (107-165)||(5378254-5378313)
chr5 (233-272)||(32390652-32390691)
chr5 (233-274)||(10924136-10924177)
chr5 (233-274)||(28500787-28500828)
chr5 (173-229)||(34873848-34873905)
chr5 (114-166)||(6682030-6682082)
chr5 (177-230)||(15710532-15710587)
chr5 (180-228)||(22397619-22397667)
chr5 (113-153)||(39179987-39180027)
chr5 (174-230)||(40565224-40565280)
chr5 (186-230)||(41063465-41063509)
[»] chr4 (49 HSPs)
chr4 (133-232)||(52555788-52555887)
chr4 (107-200)||(46717002-46717095)
chr4 (139-232)||(42971992-42972085)
chr4 (173-232)||(23067915-23067974)
chr4 (177-230)||(28588553-28588606)
chr4 (174-230)||(9661842-9661898)
chr4 (174-229)||(14542582-14542637)
chr4 (177-232)||(54420779-54420834)
chr4 (178-232)||(16991865-16991919)
chr4 (174-230)||(3673612-3673668)
chr4 (174-230)||(41486564-41486620)
chr4 (174-229)||(4634272-4634327)
chr4 (174-232)||(46728987-46729044)
chr4 (177-230)||(4959644-4959697)
chr4 (233-274)||(23067851-23067892)
chr4 (180-230)||(1646010-1646060)
chr4 (178-228)||(3169033-3169083)
chr4 (174-227)||(43156765-43156819)
chr4 (122-207)||(478121-478205)
chr4 (178-219)||(1657650-1657691)
chr4 (174-230)||(5388504-5388560)
chr4 (182-230)||(34115721-34115769)
chr4 (114-207)||(394384-394473)
chr4 (175-230)||(7242838-7242893)
chr4 (122-207)||(43244491-43244578)
chr4 (162-232)||(44375331-44375401)
chr4 (233-274)||(9474542-9474583)
chr4 (179-228)||(37869488-37869536)
chr4 (233-274)||(42972108-42972149)
chr4 (233-274)||(50003179-50003220)
chr4 (233-274)||(52555724-52555765)
chr4 (174-230)||(4622780-4622836)
chr4 (174-230)||(11817061-11817117)
chr4 (190-230)||(46775925-46775965)
chr4 (175-230)||(29577154-29577209)
chr4 (233-272)||(46716899-46716938)
chr4 (235-274)||(54420716-54420755)
chr4 (178-228)||(1124929-1124979)
chr4 (178-228)||(6408433-6408483)
chr4 (233-274)||(2945207-2945248)
chr4 (233-274)||(9661923-9661964)
chr4 (233-274)||(12519726-12519767)
chr4 (233-274)||(14542515-14542556)
chr4 (129-166)||(24825562-24825599)
chr4 (175-228)||(30416693-30416746)
chr4 (233-274)||(41486645-41486686)
chr4 (233-274)||(44375267-44375308)
chr4 (180-228)||(51646088-51646136)
chr4 (192-232)||(53903617-53903657)
[»] chr7 (41 HSPs)
chr7 (134-232)||(43807217-43807315)
chr7 (116-232)||(30992890-30993008)
chr7 (174-232)||(24470384-24470442)
chr7 (174-232)||(24475332-24475390)
chr7 (177-230)||(25855289-25855342)
chr7 (174-230)||(47749723-47749779)
chr7 (174-229)||(40775256-40775311)
chr7 (177-232)||(49166919-49166974)
chr7 (176-230)||(7985883-7985937)
chr7 (174-232)||(8611689-8611747)
chr7 (174-228)||(28015345-28015399)
chr7 (233-274)||(26017661-26017702)
chr7 (177-226)||(47156388-47156437)
chr7 (174-230)||(29804745-29804801)
chr7 (174-228)||(43483583-43483637)
chr7 (233-274)||(30992826-30992867)
chr7 (233-274)||(43807153-43807194)
chr7 (177-230)||(44681454-44681506)
chr7 (117-197)||(21990583-21990663)
chr7 (174-230)||(23732462-23732518)
chr7 (175-219)||(38649438-38649482)
chr7 (174-229)||(16263376-16263431)
chr7 (177-228)||(35141824-35141875)
chr7 (122-207)||(40761519-40761600)
chr7 (123-197)||(28665031-28665105)
chr7 (174-227)||(21329368-21329420)
chr7 (174-230)||(33530537-33530591)
chr7 (177-229)||(14734120-14734172)
chr7 (178-230)||(24045301-24045353)
chr7 (235-274)||(24475414-24475453)
chr7 (235-274)||(40476780-40476819)
chr7 (174-228)||(8319303-8319357)
chr7 (177-231)||(10250549-10250603)
chr7 (196-230)||(42490713-42490747)
chr7 (233-271)||(47749804-47749842)
chr7 (233-274)||(23732396-23732437)
chr7 (233-274)||(40775337-40775378)
chr7 (174-221)||(5025134-5025182)
chr7 (122-166)||(11832939-11832983)
chr7 (180-228)||(26017729-26017777)
chr7 (174-210)||(29804977-29805013)
[»] chr3 (44 HSPs)
chr3 (174-230)||(20201127-20201183)
chr3 (174-230)||(20203309-20203365)
chr3 (177-232)||(50519782-50519837)
chr3 (174-230)||(1165465-1165521)
chr3 (174-232)||(22286816-22286874)
chr3 (174-232)||(41882475-41882533)
chr3 (174-232)||(45664218-45664276)
chr3 (177-230)||(35501828-35501881)
chr3 (177-230)||(25374139-25374192)
chr3 (174-230)||(1220284-1220340)
chr3 (174-230)||(21803519-21803575)
chr3 (174-225)||(22844040-22844091)
chr3 (174-229)||(43029672-43029727)
chr3 (180-230)||(53426799-53426849)
chr3 (174-230)||(1806529-1806585)
chr3 (174-230)||(4019591-4019646)
chr3 (174-230)||(37051613-37051669)
chr3 (178-230)||(40462064-40462116)
chr3 (174-220)||(42106100-42106146)
chr3 (174-230)||(20251640-20251697)
chr3 (177-210)||(25939565-25939598)
chr3 (177-230)||(43242803-43242856)
chr3 (233-274)||(47914596-47914637)
chr3 (233-274)||(54240156-54240197)
chr3 (182-230)||(7656546-7656592)
chr3 (235-274)||(3088666-3088705)
chr3 (235-274)||(22286753-22286792)
chr3 (174-217)||(25631692-25631735)
chr3 (134-207)||(30156399-30156468)
chr3 (183-230)||(33070152-33070199)
chr3 (233-272)||(43839523-43839562)
chr3 (178-228)||(2598076-2598126)
chr3 (233-271)||(21803600-21803638)
chr3 (233-271)||(45664291-45664329)
chr3 (233-274)||(1165399-1165440)
chr3 (233-274)||(14741328-14741369)
chr3 (233-274)||(32089933-32089974)
chr3 (177-230)||(34766973-34767024)
chr3 (233-274)||(35501762-35501803)
chr3 (175-228)||(40797023-40797075)
chr3 (233-274)||(43029753-43029794)
chr3 (177-230)||(43839587-43839638)
chr3 (202-230)||(29182677-29182705)
chr3 (178-228)||(33977994-33978041)
[»] scaffold0045 (1 HSPs)
scaffold0045 (174-232)||(9715-9773)
[»] scaffold1294 (1 HSPs)
scaffold1294 (179-227)||(774-822)
[»] scaffold0340 (1 HSPs)
scaffold0340 (180-232)||(11844-11896)
[»] scaffold0316 (2 HSPs)
scaffold0316 (184-230)||(12272-12318)
scaffold0316 (233-274)||(12206-12247)
[»] scaffold0011 (1 HSPs)
scaffold0011 (177-230)||(11011-11064)
[»] scaffold0665 (1 HSPs)
scaffold0665 (177-217)||(1174-1213)
[»] scaffold0536 (1 HSPs)
scaffold0536 (134-197)||(2839-2902)
[»] scaffold0157 (1 HSPs)
scaffold0157 (233-274)||(1144-1185)


Alignment Details
Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 60 - 232
Target Start/End: Complemental strand, 8055060 - 8054875
Alignment:
Q  60 ttaagatgtttgaatgaatttttaaaactaaatttgataaagatatcaagccttttt-------------ctctttctcttatctcattctcaaacccta 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||             |||||||||||||||| |||||||||||||    
T  8055060 ttaagatgtttgaatgaatttttaaaactaaatttgataaagatatcaagcttttttttaagccttttttctctttctcttatctccttctcaaacccta 8054961  T
Q  147 gccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8054960 gccgtcactcctttcttcttttcgttggaggggtgatttagggtcaatttttgacccaaaattatccctctaactcgtttttctat 8054875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 9992656 - 9992710
Alignment:
Q  176 ggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  9992656 ggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 9992710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 16937464 - 16937406
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16937464 gaggggtgatttagggtcaatttttgatccaaaatcatccctctaacttgtttttctat 16937406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 31874077 - 31874128
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31874077 ggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttc 31874128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 44295305 - 44295360
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  44295305 gaggggtgatttagggtcaatttttgacccaaaatcatctctctaacttgtttttc 44295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 10042750 - 10042804
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  10042750 gaggggtgatttatggtcaatttttgacccaaaatcacccctctaactcgttttt 10042804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 9270010 - 9270066
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||    
T  9270010 gaggggtgatttatgatcaatttttgacccaaaatcacccctctaactcgtttttct 9270066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 32104882 - 32104841
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  32104882 attttcacatctgttacgttttttattttgtgatttcgtcgt 32104841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 15665528 - 15665584
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||    
T  15665528 gaggggtgatttagggtcaacttttgacacaaaatcacccctctaacttgtttttct 15665584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 37658955 - 37659009
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||||||||||||||||| |||||||| |||||||| | ||||||    
T  37658955 gaggggtgatttagggtcaatttttgacacaaaatcacccctctaatttgttttt 37659009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 41996615 - 41996656
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  41996615 attttcacatctgttacgttttttattttgtgatttcatcgt 41996656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 36545906 - 36545850
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||| ||||||| ||||||||| |||||||| |||| |||||||||||||||||||    
T  36545906 gagggatgatttaaggtcaatttgtgacccaatatcacccctctaactcgtttttct 36545850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 230
Target Start/End: Original strand, 5989624 - 5989675
Alignment:
Q  179 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||| |||||||||||   |||||||||||||||||    
T  5989624 gtgatttagggtcaatttttaacccaaaatcacatctctaactcgtttttct 5989675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 32256847 - 32256792
Alignment:
Q  174 gaggggtgatttagggtcaat-ttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||||||||| |||| ||||||||||| |||||||||| ||||||    
T  32256847 gaggggtgatttagggtcaatttttttacccaaaatcacccctctaacttgttttt 32256792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 8054852 - 8054810
Alignment:
Q  233 attttcacatctgttacgtttttt-attttgtgatttcgtcgt 274  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  8054852 attttcacatctgttacgtttttttattttgtgatttcgtcgt 8054810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 1810421 - 1810337
Alignment:
Q  122 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 207  Q
    ||||||||||| ||| |||||||||| |||||  | ||||||||| |  |  |||||||||||||||||||| |||||||||||||    
T  1810421 tctcttatctccttcccaaaccctagtcgtcacccttttcttcttctttttagaggggtgatttagggtcaa-ttttgacccaaaa 1810337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 122 - 197
Target Start/End: Original strand, 12329556 - 12329628
Alignment:
Q  122 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 197  Q
    |||||| |||| ||||||||||||| |||||| || |||||||||||||   || ||||||||||| |||||||||    
T  12329556 tctcttctctccttctcaaaccctaaccgtcactcatttcttcttttca---gatgggtgatttagagtcaatttt 12329628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 26937514 - 26937567
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 227  Q
    ||||||| ||||||||| || ||||||| |||||||| ||||||||||||||||    
T  26937514 gaggggttatttagggttaagttttgactcaaaatcacccctctaactcgtttt 26937567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 274
Target Start/End: Original strand, 5457150 - 5457182
Alignment:
Q  242 tctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||||||||||||||||||||||||    
T  5457150 tctgttacgttttttattttgtgatttcgtcgt 5457182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 14115914 - 14115875
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctct 217  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  14115914 gggtgatttagg-tcaatttttgacccaaaatcatccctct 14115875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 14531033 - 14530977
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||| ||||||||||||||||||| | |||||| || ||||| ||||||||||    
T  14531033 gaggggtggtttagggtcaatttttgactccaaatcacccttctaaatcgtttttct 14530977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 27534524 - 27534480
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctcta 218  Q
    ||||||||||||||||||||||||||| || ||||| ||||||||    
T  27534524 gaggggtgatttagggtcaatttttgatcccaaatcgtccctcta 27534480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 41996511 - 41996567
Alignment:
Q  129 tctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgattt 185  Q
    |||| |||| ||| ||||||||||| || |||||||||||| |||||||||||||||    
T  41996511 tctccttcttaaatcctagccgtcactcatttcttcttttcgtcggaggggtgattt 41996567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 16996930 - 16996891
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  16996930 tttcacatctatttcgttttttattttgtgatttcgtcgt 16996891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 7269585 - 7269535
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||| ||||||||||||||| |||||| || ||||||||| ||||    
T  7269585 ggtgatttagagtcaatttttgaccctaaatcacccttctaactcgctttt 7269535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 271
Target Start/End: Original strand, 9270091 - 9270129
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgt 271  Q
    |||||||||||| || |||||||||||||||||||||||    
T  9270091 attttcacatctatttcgttttttattttgtgatttcgt 9270129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 166
Target Start/End: Original strand, 9501503 - 9501557
Alignment:
Q  112 tttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 166  Q
    |||||| | ||||||| |||| ||||||||||||||||||||| | |||||||||    
T  9501503 tttttccccttctcttctctccttctcaaaccctagccgtcatccttttcttctt 9501557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 13977390 - 13977448
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||| |||||| |||| ||||||||| | || ||||| ||||||||||||    
T  13977390 gaggggtgatttatggtcaaatttttacccaaaattacccatctaattcgtttttctat 13977448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 15237756 - 15237706
Alignment:
Q  180 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||| || | |||||| || ||||||||||||||||    
T  15237756 tgatttagggtcaatttttaactctaaatcacccatctaactcgtttttct 15237706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 179 - 232
Target Start/End: Original strand, 23766736 - 23766787
Alignment:
Q  179 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||| |||||||||||||||||||||||  ||  ||||||||||||||||    
T  23766736 gtgatttaaggtcaatttttgacccaaaatca--cccataactcgtttttctat 23766787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 3680993 - 3681034
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  3680993 attttcacatctatttcgttttttattttgtgattttgtcgt 3681034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 5989700 - 5989741
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  5989700 attttcacatctatttcgttttttattttgtgattttgtcgt 5989741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 11656032 - 11655979
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||| |||||||||||||| ||||||  | || |||||||||||||    
T  11656032 gggtgatttaggatcaatttttgacccgaaatcactcttccaactcgtttttct 11655979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 31147845 - 31147804
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || || |||||||||||||||||||||||    
T  31147845 attttcacatctatttcgctttttattttgtgatttcgtcgt 31147804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 31202371 - 31202420
Alignment:
Q  117 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 166  Q
    ||||||||||| | || ||||||||||||||||||||  |||||||||||    
T  31202371 ctctttctcttctatccttctcaaaccctagccgtcacccctttcttctt 31202420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 36545825 - 36545784
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  36545825 attttcacatctatttcgttttttattttgtgattttgtcgt 36545784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 44295386 - 44295427
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  44295386 attttcacatctattttgttttttattttgtgatttcgtcgt 44295427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 284596 - 284544
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||| | ||||||||||||||||||| | | || ||||||||||||||    
T  284596 ggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 284544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 631281 - 631333
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||| | ||||||||||||||||||| | | || ||||||||||||||    
T  631281 ggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 631333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 817093 - 817145
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||| | ||||||||||||||||||| | | || ||||||||||||||    
T  817093 ggtgatttatgatcaatttttgacccaaaattaccgctttaactcgtttttct 817145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 14327468 - 14327524
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||| ||||||||||||||||||||| || ||| ||||| |  ||||||||||    
T  14327468 gaggggtggtttagggtcaatttttgaccccaattcacccctccatatcgtttttct 14327524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 208
Target Start/End: Complemental strand, 31147919 - 31147891
Alignment:
Q  180 tgatttagggtcaatttttgacccaaaat 208  Q
    |||||||||||||||||||||||||||||    
T  31147919 tgatttagggtcaatttttgacccaaaat 31147891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 226
Target Start/End: Original strand, 32061783 - 32061835
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttt 226  Q
    |||||||  ||||||||||||||||||||| |||||| || ||||| ||||||    
T  32061783 gaggggtagtttagggtcaatttttgaccccaaatcacccttctaaatcgttt 32061835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 32920641 - 32920697
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||| |||||||||||| |||| ||| |||||| | |||||| ||||||||||    
T  32920641 gaggggtggtttagggtcaatctttgcccctaaatcaccgctctaaatcgtttttct 32920697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 98; Significance: 2e-48; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 111 - 232
Target Start/End: Complemental strand, 7640544 - 7640423
Alignment:
Q  111 ctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatca 210  Q
    ||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  7640544 ctttttctctttctcttctctccttctcaaaccctagccgtcactcctttcttcttttcgttggaggggtgatttagggtcaatttttgacccaaaatca 7640445  T
Q  211 tccctctaactcgtttttctat 232  Q
     |||||||||||||||||||||    
T  7640444 cccctctaactcgtttttctat 7640423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 5930416 - 5930468
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5930416 ggtgatttagggttaatttttgacccaaaatcatccctctaactcgtttttct 5930468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 3390421 - 3390476
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  3390421 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttc 3390476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 25771434 - 25771489
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||    
T  25771434 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttc 25771489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 6089882 - 6089940
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||    
T  6089882 gaggggtgatttaaggtcaatttttgacccaaaatcacccctctaattcgtttttctat 6089940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 25516483 - 25516541
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  25516483 gaggggtgatttagggtcaatatttgacccaaaatcacccctctaactcatttttctat 25516541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 27191460 - 27191402
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  27191460 gagggatgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctat 27191402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 27841274 - 27841216
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  27841274 gagggatgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctat 27841216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 40125378 - 40125436
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||    
T  40125378 gaggggtgatttagggttaatttttgacccaaaatcacccctctaacttgtttttctat 40125436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 42105877 - 42105819
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||    
T  42105877 gaggggtgctttagggtcaatttttgacccaaaatcaccactctaactcgtttttctat 42105819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 44167834 - 44167776
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||    
T  44167834 gaggggtgatatatggtcaatttttgacccaaaatcacccctctaactcgtttttctat 44167776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 10589028 - 10589081
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  10589028 aggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgttttt 10589081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 3464948 - 3465006
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||||||||| ||||||||| | | |||||||||||||||||    
T  3464948 gaggggtgatttagggtcaatttttgatccaaaatcaccacactaactcgtttttctat 3465006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 15674099 - 15674045
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| ||||||    
T  15674099 gaggggtgatttagggtcaatttttgacccaaaatcactcctctaacttgttttt 15674045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 37883642 - 37883700
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||| ||||||||||||    
T  37883642 gaggggtgatttagggtcaatttttaatccaaaatcacccctctaattcgtttttctat 37883700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 41176851 - 41176905
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||||||||||||||||||||||| || || ||||||||||||||    
T  41176851 gaggggtgatttagggtcaatttttgacccaaaaccacccatctaactcgttttt 41176905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 43566866 - 43566922
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  43566866 gaggggtgatt-agggtcaatttttgacccaaaatca-ccctctaactcgtttttctat 43566922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 7640400 - 7640359
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  7640400 attttcacatctgttacgttttttattttgtgatttcgtcgt 7640359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 27024261 - 27024209
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    |||||||||||||||| ||||||||||||||||| |||||||||| |||||||    
T  27024261 gggtgatttagggtcattttttgacccaaaatcacccctctaacttgtttttc 27024209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 29812736 - 29812684
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||| |||||||| ||||||||||| |||||||    
T  29812736 ggtgatttagggtcaatttttgacacaaaatcacccctctaactcatttttct 29812684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 9715667 - 9715616
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  9715667 gggtgatttagggtcaatttttgatccaaaatcatctctccaactcgttttt 9715616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 16880084 - 16880029
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||  ||||||||||||||||||||||| |||||| |||||||||||    
T  16880084 gaggggtgatttttggtcaatttttgacccaaaatcacccctctcactcgtttttc 16880029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 19581128 - 19581074
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||| |||||||||||| || |||||||| |||||||||||||||||    
T  19581128 gaggggtgattttgggtcaatttttaacacaaaatcacccctctaactcgttttt 19581074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 43929400 - 43929359
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| |||||||||||||||||||||||||||||||    
T  43929400 attttcacatatgttacgttttttattttgtgatttcgtcgt 43929359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 216
Target Start/End: Original strand, 5754207 - 5754309
Alignment:
Q  117 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt-ttc--atcggaggggtgatttagggtcaatttttgaccc-aaaatcatc 212  Q
    |||| |||||| ||||||||||||||||||||||||||   ||||||||| |||   |  |||||||||||||||||||| ||||||||| |||||||||    
T  5754207 ctctctctcttctctcattctcaaaccctagccgtcatcattttcttcttcttctttttagaggggtgatttagggtcaa-ttttgacccaaaaatcatc 5754305  T
Q  213 cctc 216  Q
    ||||    
T  5754306 cctc 5754309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 197
Target Start/End: Original strand, 41797535 - 41797617
Alignment:
Q  112 tttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 197  Q
    ||||||||  |||||| ||||||||||||||||||||||| |  ||||| ||||| |||   ||||||||||||||||| ||||||    
T  41797535 tttttctccctctcttctctcattctcaaaccctagccgttaccccttttttcttgtca---gaggggtgatttagggttaatttt 41797617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 26491292 - 26491350
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||| ||||| | ||||||||||||||||||||| |||| |||||| |||||||||    
T  26491292 gaggggtaatttaagttcaatttttgacccaaaatcacccctttaactcatttttctat 26491350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 36507924 - 36507978
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||| ||||||||||||||||||||||||||| | |||| |||| |||||||||    
T  36507924 ggtgacttagggtcaatttttgacccaaaatcacctctctgactcatttttctat 36507978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 5930493 - 5930534
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  5930493 attttcacatctatttcgttttttattttgtgatttcgtcgt 5930534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 9715588 - 9715547
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  9715588 attttcacatctatttcgttttttattttgtgatttcgtcgt 9715547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 41841938 - 41841995
Alignment:
Q  174 gaggggtgatttagggtcaatttttgaccc-aaaatcatccctctaactcgtttttct 230  Q
    ||||| ||||||| |||||||||||||||| ||||||| |||| ||||||||||||||    
T  41841938 gagggttgatttatggtcaatttttgacccaaaaatcacccctttaactcgtttttct 41841995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 25623170 - 25623114
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||   ||||||||||||||||||||| || | ||||||||||||||    
T  25623170 gaggggtgatttattatcaatttttgacccaaaatcacccatataactcgtttttct 25623114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 27191378 - 27191339
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  27191378 tttcacatctatttcgttttttattttgtgatttcgtcgt 27191339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 27841192 - 27841153
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  27841192 tttcacatctatttcgttttttattttgtgatttcgtcgt 27841153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Original strand, 43566946 - 43566985
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  43566946 tttcacatctatttcgttttttattttgtgatttcgtcgt 43566985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 44167752 - 44167713
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  44167752 tttcacatctatttcgttttttattttgtgatttcgtcgt 44167713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 3465030 - 3465068
Alignment:
Q  236 ttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||| || ||||||||||||||||||||||||||    
T  3465030 ttcacatctatttcgttttttattttgtgatttcgtcgt 3465068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 3390502 - 3390543
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  3390502 attttcacatctattttgttttttattttgtgatttcgtcgt 3390543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 25771515 - 25771556
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  25771515 attttcacatctattttgttttttattttgtgatttcgtcgt 25771556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 27024183 - 27024142
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  27024183 attttcacatctattttgttttttattttgtgatttcgtcgt 27024142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 5071495 - 5071439
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||| |||| |||||||||||||||  |||||| || ||||| ||||||||||    
T  5071495 gaggggtggtttatggtcaatttttgaccttaaatcacccttctaaatcgtttttct 5071439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 17037774 - 17037738
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatca 210  Q
    ||||||||||||  |||||||||||||||||||||||    
T  17037774 gaggggtgatttttggtcaatttttgacccaaaatca 17037738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 19953373 - 19953405
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaa 206  Q
    ||||||||||||| |||||||||||||||||||    
T  19953373 gaggggtgatttatggtcaatttttgacccaaa 19953405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 34417063 - 34416995
Alignment:
Q  129 tctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 197  Q
    |||| ||||||||||||| |||||| |||||||| ||| |  |  ||||||||||||| ||||||||||    
T  34417063 tctccttctcaaaccctaaccgtcactcctttctacttctttttagaggggtgatttaaggtcaatttt 34416995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 35353641 - 35353677
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatca 210  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  35353641 gaggggtggtttagggtcaatttttgaccccaaatca 35353677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 94; Significance: 6e-46; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 19759710 - 19759835
Alignment:
Q  107 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaa 206  Q
    |||| |||||||||||||||| |||| ||||||||| || ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19759710 aagcatttttctctttctcttctctccttctcaaactcttgccgtcactcctttcttcttttcgtcggaggggtgatttagggtcaatttttgacccaaa 19759809  T
Q  207 atcatccctctaactcgtttttctat 232  Q
    |||| |||||||||||||||||||||    
T  19759810 atcacccctctaactcgtttttctat 19759835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 16913317 - 16913372
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  16913317 gaggggtgatttagggtcaatttttgacccgaaatcacccctctaactcgtttttc 16913372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 12576603 - 12576545
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||    
T  12576603 gaggggtgatttagggtcaatttttgaccctaaatcacccctctaacttgtttttctat 12576545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 32457635 - 32457691
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  32457635 gaggggtgatttagcgtcaatttttgacccaaaatcacccatctaactcgtttttct 32457691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 548990 - 548934
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||    
T  548990 gaggagtgatataaggtcaatttttgacccaaaatcacccctctaactcgtttttct 548934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 32804286 - 32804337
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||||||||||||||||||||||| || |||||||| |||||    
T  32804286 gggtgatttagggtcaatttttgacccaaaatcacccatctaactcattttt 32804337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 4663945 - 4663891
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||| |||||||    
T  4663945 gaggggtgattgtgggtcaatttttgacccaaaatcacccctctaacacgttttt 4663891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 20845011 - 20845053
Alignment:
Q  188 ggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  20845011 ggtcaatttttgacccaaaatcacccctctaactcgtttttct 20845053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 23843468 - 23843427
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| |||||||||||||||||||||||||||||    
T  23843468 attttcacatcttttacgttttttattttgtgatttcgtcgt 23843427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 13234232 - 13234177
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||| ||||||||||    
T  13234232 gaggggtgatttagggtcaatttttgacctaaaatca-ccttctaattcgtttttct 13234177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 10744571 - 10744622
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||||| ||||||||||||||||  ||||||||| ||||||    
T  10744571 gggtgatttagggtcaacttttgacccaaaatcactcctctaacttgttttt 10744622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 272
Target Start/End: Original strand, 19759858 - 19759897
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtc 272  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  19759858 attttcacatttgttacgttttttattttgtgatttcgtc 19759897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 15128260 - 15128218
Alignment:
Q  188 ggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||| |||||||||| |||||||||||||||||||    
T  15128260 ggtcaatttttgtcccaaaatcacccctctaactcgtttttct 15128218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 16913398 - 16913439
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  16913398 attttcacatctatttcgttttttattttgtgatttcgtcgt 16913439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 891581 - 891633
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||| |||||| |||||||||||||||| | |||| ||||||||||||||    
T  891581 ggtgattaagggtcgatttttgacccaaaattacccctataactcgtttttct 891633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 32574446 - 32574498
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||| ||||| |||||||||||||||||||| | |||||||||||| ||||||    
T  32574446 ggtgttttagagtcaatttttgacccaaaattaaccctctaactcgcttttct 32574498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 33194598 - 33194650
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||| |||||||||   |||||| ||||||||||    
T  33194598 ggtgatttagggtcaatttttgatccaaaatcacatctctaattcgtttttct 33194650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 34020607 - 34020651
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctcta 218  Q
    |||||||| ||||||||||||||||||||||| ||||||| ||||    
T  34020607 gaggggtggtttagggtcaatttttgacccaacatcatccatcta 34020651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 7049236 - 7049278
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctc 216  Q
    |||||||||||||||||||| ||||||| |||||||| |||||    
T  7049236 gaggggtgatttagggtcaacttttgactcaaaatcacccctc 7049278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 274
Target Start/End: Original strand, 33194674 - 33194716
Alignment:
Q  232 tattttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||| ||  |||||||||||||||||||||||||    
T  33194674 tattttcacatctattttgttttttattttgtgatttcgtcgt 33194716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 1302647 - 1302696
Alignment:
Q  117 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 166  Q
    |||| |||||| |||| ||||||||||||||||||||  |||||||||||    
T  1302647 ctctctctcttttctccttctcaaaccctagccgtcacccctttcttctt 1302696  T

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Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 210
Target Start/End: Original strand, 8644237 - 8644270
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatca 210  Q
    |||||||||||||||||||||||||| |||||||    
T  8644237 gggtgatttagggtcaatttttgaccaaaaatca 8644270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 13234152 - 13234111
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  13234152 attttcacatctattttgttttttattttgtgatttcgtcgt 13234111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 21326395 - 21326520
Alignment:
Q  107 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaa 206  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||| | ||||||||||||| | |||||||||||||||| ||||||||||| | |||    
T  21326395 aagcctttttctctttctcttctctctttctcaaaccctagccgtcacttctttcttcttttcgttggaggggtgatttaggatcaatttttgaacaaaa 21326494  T
Q  207 atcatccctctaactcgtttttctat 232  Q
    |||| |||||||||||||||||||||    
T  21326495 atcacccctctaactcgtttttctat 21326520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 165 - 232
Target Start/End: Complemental strand, 44562883 - 44562816
Alignment:
Q  165 ttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44562883 ttttcgtcggatgggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttctat 44562816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 122 - 232
Target Start/End: Original strand, 5832164 - 5832280
Alignment:
Q  122 tctcttatctcattctcaaaccctagccgtcattcctttcttctt------ttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccct 215  Q
    |||||| |||| |||| ||||||||||||||| ||||||||||||      ||  |  |||||||||||||||||||||||||||||| |||||| ||||    
T  5832164 tctcttctctccttcttaaaccctagccgtcactcctttcttcttcttctttttgtaagaggggtgatttagggtcaatttttgaccctaaatcacccct 5832263  T
Q  216 ctaactcgtttttctat 232  Q
    |||||||||||||||||    
T  5832264 ctaactcgtttttctat 5832280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 52839412 - 52839466
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  52839412 gaggggtgatttagggtcaatttttgacccaaaatcacccttctaactcgttttt 52839466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 175 - 232
Target Start/End: Complemental strand, 630909 - 630852
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||    
T  630909 aggggtgatttagggtcaatttttgaccctaaatcacccatctaactcgtttttctat 630852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 232
Target Start/End: Original strand, 23320376 - 23320487
Alignment:
Q  109 gcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaat 208  Q
    ||||||||||||||||||| |||| |||||||||||||| ||||| |||||||||||||||           | || |||||  ||||||||||||||||    
T  23320376 gcctttttctctttctcttctctccttctcaaaccctagtcgtcactcctttcttcttttc-----------gtttgagggt-gatttttgacccaaaat 23320463  T
Q  209 catccctctaactcgtttttctat 232  Q
    || |||||||||||||||||||||    
T  23320464 cacccctctaactcgtttttctat 23320487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 17579757 - 17579813
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  17579757 gaggggtgacttagggtcaatttttgaaccaaaatcatccctctaactcatttttct 17579813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 6213011 - 6212956
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||    
T  6213011 gaggggtgatttatggtcaatttttgacccaaaatcacacctctaactcgtttttc 6212956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 22345037 - 22344982
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| |||||||    
T  22345037 gaggggtgatttaggttcaatttttgacccaaaatcacccctctaacttgtttttc 22344982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Complemental strand, 13691881 - 13691827
Alignment:
Q  176 ggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||| |||||||||||||||||||||||||||| |||||||| ||||||||||    
T  13691881 ggggtggtttagggtcaatttttgacccaaaatcacccctctaaatcgtttttct 13691827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 23320510 - 23320551
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23320510 attttcacatctgttacgttttttattttgtgatttcgtcgt 23320551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 44514115 - 44514061
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||||||||||||||||||||||||| | || ||||| ||||||    
T  44514115 gaggggtgatttagggtcaatttttgacccaaaatcacctctttaacttgttttt 44514061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 52839510 - 52839564
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||| | ||||||||||||||||||||| || ||||||||||||||    
T  52839510 gaggggtgatttatgatcaatttttgacccaaaatcacccttctaactcgttttt 52839564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 14717367 - 14717312
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||  ||| ||| |||||||||||||||||||    
T  14717367 gaggggtgatttagggtcaatttttgacttaaattca-ccctctaactcgtttttct 14717312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 38646573 - 38646629
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||| |||||||| ||||||||||||||||||||||| || | ||||||||||||||    
T  38646573 gaggagtgatttatggtcaatttttgacccaaaatcacccatgtaactcgtttttct 38646629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 44562793 - 44562754
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtc 272  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  44562793 attttcacatctgttacgttttatattttgtgatttcgtc 44562754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 45659041 - 45659087
Alignment:
Q  184 ttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||||||   |||||||||||||||||    
T  45659041 ttagggtcaatttttgacccaaaatcactgctctaactcgtttttct 45659087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 900192 - 900233
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  900192 attttcacatctatttcgttttttattttgtgatttcgtcgt 900233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 1768036 - 1768077
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  1768036 attttcacatctatttcgttttttattttgtgatttcgtcgt 1768077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 15698270 - 15698311
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  15698270 attttcacatctatttcgttttttattttgtgatttcgtcgt 15698311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 46589165 - 46589217
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 227  Q
    ||||||||||||| | |||||||||||| |||||||| ||||||||||||||||    
T  46589165 gaggggtgatttatgatcaatttttgactcaaaatca-ccctctaactcgtttt 46589217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 230
Target Start/End: Original strand, 8893294 - 8893338
Alignment:
Q  186 agggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||| ||||||||||||||||||| || ||||||||||||||||    
T  8893294 agggttaatttttgacccaaaatcacccttctaactcgtttttct 8893338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 15791675 - 15791607
Alignment:
Q  129 tctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 197  Q
    |||| |||||||||||||| ||||||  |||||||||| |  |||||||| ||||||||| ||||||||    
T  15791675 tctccttctcaaaccctagtcgtcatctctttcttcttcttgtcggagggctgatttaggatcaatttt 15791607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 51417928 - 51417972
Alignment:
Q  122 tctcttatctcattctcaaaccctagccgtcattcctttcttctt 166  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||||    
T  51417928 tctcttatctccttctcaaaccctaaccgtcatccctttcttctt 51417972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Original strand, 4564589 - 4564628
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  4564589 tttcacatctatttcgttttttattttgtgatttcgtcgt 4564628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 228
Target Start/End: Complemental strand, 33177722 - 33177667
Alignment:
Q  173 ggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||| ||  |||||||||| ||||||||||| |||||||| |||||    
T  33177722 ggaggggtgatttatggctaatttttgactcaaaatcatccatctaactccttttt 33177667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 210
Target Start/End: Complemental strand, 48655190 - 48655155
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatca 210  Q
    ||||||||||||| ||||||||||||||||||||||    
T  48655190 aggggtgatttagagtcaatttttgacccaaaatca 48655155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 12148169 - 12148115
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||| |||| ||||||||||||||  | | |||||||||||||||||||    
T  12148169 ggtgatttagcgtcagtttttgacccaaaaataccactctaactcgtttttctat 12148115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 22032215 - 22032169
Alignment:
Q  174 gaggggtgatttagggtcaatttttgaccc-aaaatcatccctctaa 219  Q
    ||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  22032215 gagggatgatttagggtcaatttttgacccaaaaatcacccctctaa 22032169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 232 - 274
Target Start/End: Complemental strand, 27469753 - 27469711
Alignment:
Q  232 tattttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||| || |||||||| |||||||||||||||||    
T  27469753 tattttcacatctatttcgttttttcttttgtgatttcgtcgt 27469711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 35078009 - 35077959
Alignment:
Q  180 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||| | |||| |||||||||||||||| | |||||||||||||||||    
T  35078009 tgatttatgatcaaattttgacccaaaatcacctctctaactcgtttttct 35077959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Complemental strand, 37685206 - 37685168
Alignment:
Q  189 gtcaatttttgacccaaaatcatccctctaactcgtttt 227  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  37685206 gtcaatttttgacccaaaatcaatcctctaactcgtttt 37685168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 189 - 227
Target Start/End: Original strand, 37700312 - 37700350
Alignment:
Q  189 gtcaatttttgacccaaaatcatccctctaactcgtttt 227  Q
    ||||||||||||||||||||||  |||||||||||||||    
T  37700312 gtcaatttttgacccaaaatcaatcctctaactcgtttt 37700350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 8937612 - 8937648
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccc 214  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  8937612 gggtgatttagggtcaa-ttttgacccaaaatcatccc 8937648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 10877338 - 10877391
Alignment:
Q  178 ggtgatttagggtcaatttttg-acccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||| |||||||||||  |||||||||||  ||||||||||||||||||    
T  10877338 ggtgatttatggtcaatttttttacccaaaatcacacctctaactcgtttttct 10877391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 15276494 - 15276453
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  15276494 attttcacatctattttgttttttattttgtgatttcgtcgt 15276453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 21326543 - 21326584
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||||| |||||||||||||  |||||||||||    
T  21326543 attttcacatctgttgcgttttttattttacgatttcgtcgt 21326584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 22344956 - 22344915
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  22344956 attttcacatctattttgttttttattttgtgatttcgtcgt 22344915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 28678344 - 28678295
Alignment:
Q  117 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 166  Q
    |||| |||||| |||| ||||||||||||||||||||  |||||||||||    
T  28678344 ctctctctcttctctccttctcaaaccctagccgtcacccctttcttctt 28678295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 32784047 - 32784119
Alignment:
Q  134 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 207  Q
    ||||||||||| ||| ||||  ||||||||||| |  ||  ||||||||||||||||||| |||||||||||||    
T  32784047 ttctcaaaccccagctgtcacccctttcttcttcttttcaaaggggtgatttagggtcaa-ttttgacccaaaa 32784119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 40488441 - 40488400
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || |||||||| |||||||||||||||||    
T  40488441 attttcacatctatttcgttttttcttttgtgatttcgtcgt 40488400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 45659112 - 45659153
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  45659112 attttcacatctatttcattttttattttgtgatttcgtcgt 45659153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Complemental strand, 37825518 - 37825474
Alignment:
Q  122 tctcttatctcattctcaaaccctagccgtcattcctttcttctt 166  Q
    |||||| |||| |||||||||||||||||||| || |||||||||    
T  37825518 tctcttctctccttctcaaaccctagccgtcactcttttcttctt 37825474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 216
Target Start/End: Original strand, 42276298 - 42276377
Alignment:
Q  136 ctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctc 216  Q
    |||||||||||| |||||  | ||||||||| |  || |||||||||||||||||  ||||||||| |||||||| |||||    
T  42276298 ctcaaaccctagtcgtcacccttttcttcttcttttcagaggggtgatttagggt-tatttttgacacaaaatcacccctc 42276377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 232
Target Start/End: Complemental strand, 5718 - 5593
Alignment:
Q  107 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaa 206  Q
    ||||||||||||||||||||| ||||||||||||||  ||||| ||| | |||||||||||||||||||| ||| |||||||||||||||||||| ||||    
T  5718 aagcctttttctctttctcttctctcattctcaaactttagccatcacttctttcttcttttcatcggagaggttatttagggtcaatttttgactcaaa 5619  T
Q  207 atcatccctctaactcgtttttctat 232  Q
    ||   |||| ||||||||||||||||    
T  5618 attgcccctttaactcgtttttctat 5593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 5570 - 5529
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  5570 attttcacatctgttatgttttttattttgtgatttcgtcgt 5529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 5e-34; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 105 - 232
Target Start/End: Complemental strand, 4727118 - 4726995
Alignment:
Q  105 tcaagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgaccca 204  Q
    ||||||||||||||||||||||| ||||   |||||||||||||| ||| ||||| ||||||||  |||||||||| |||||||||||||||||||||||    
T  4727118 tcaagcctttttctctttctcttctctc---ctcaaaccctagccatcactcctt-cttctttttgtcggaggggtaatttagggtcaatttttgaccca 4727023  T
Q  205 aaatcatccctctaactcgtttttctat 232  Q
    ||||||||| | ||||||||||||||||    
T  4727022 aaatcatccatataactcgtttttctat 4726995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 34894041 - 34893985
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||    
T  34894041 gaggggtgatttacggtcaatttttgacccaaaatcacccctctaactcgtttttct 34893985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 28618593 - 28618651
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  28618593 gaggggtgatttaaggtcaatttttaacccaaaatcacccctctaactcgtttttctat 28618651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 9035073 - 9035017
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||    
T  9035073 gaggggtgatttatgatcaatttttgactcaaaatcatccctctaactcgtttttct 9035017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 6887303 - 6887248
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||    
T  6887303 gaggggtgatttagggtcaatttttaacccaaaatcacccctctaacttgtttttc 6887248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 31645818 - 31645873
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| |||||||    
T  31645818 gaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgtttttc 31645873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 29310474 - 29310420
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  29310474 gaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgttttt 29310420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Complemental strand, 33486695 - 33486641
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||| ||||||    
T  33486695 gaggggtgatttagggtcaatttttgacccaaaatcacccatctaacttgttttt 33486641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 175 - 232
Target Start/End: Original strand, 4070545 - 4070601
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||    
T  4070545 aggggtgatttagggtca-tttttgacccaaaatcacccctctgactcgtttttctat 4070601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 41358031 - 41358084
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatca-tccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  41358031 ggtgatttagggtcaatttttgacccaaaatcaccccctctaactcgtttttct 41358084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 178 - 230
Target Start/End: Original strand, 2415393 - 2415445
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||||||| || ||||||| ||||||||    
T  2415393 ggtgatttagggtcaatttttgacccaaaatcacccttctaacttgtttttct 2415445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 228
Target Start/End: Complemental strand, 18472843 - 18472796
Alignment:
Q  181 gatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||    
T  18472843 gatttagggtcaatttttgacccaaaatcacccctctaacttgttttt 18472796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 41554475 - 41554529
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||| ||||||||||| ||||||||| |||||||||| ||||||    
T  41554475 gaggggtgatttaggatcaatttttgatccaaaatcacccctctaacttgttttt 41554529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 37424982 - 37425035
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 227  Q
    ||||||||||||| ||||||||| |||||||||||||  |||||||||||||||    
T  37424982 gaggggtgatttatggtcaatttctgacccaaaatcacgcctctaactcgtttt 37425035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 19646166 - 19646110
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||| |||| ||||||| ||||||||||||||| ||||||||||| |||||||    
T  19646166 gaggggtggtttaaggtcaatgtttgacccaaaatcacccctctaactcatttttct 19646110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 41988173 - 41988229
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||| |||||||||||  |||||||  |||||||||||||||||||    
T  41988173 gaggggtgatttaggatcaatttttgattcaaaatcgcccctctaactcgtttttct 41988229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 6648038 - 6647983
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    |||||| |||||| |||||| ||||||||||||||||  |||||||||||||||||    
T  6648038 gaggggcgatttatggtcaaattttgacccaaaatcactcctctaactcgtttttc 6647983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 4726972 - 4726931
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  4726972 attttcacatctgttacatttcttattttgtgatttcgtcgt 4726931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 220
Target Start/End: Complemental strand, 8812276 - 8812231
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatcatccctctaac 220  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||    
T  8812276 aggggtgatatagggtcaatttttaacccaaaatcacccctctaac 8812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 41063440 - 41063399
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  41063440 attttcacatctatttcgttttttattttgtgatttcgtcgt 41063399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 165
Target Start/End: Original strand, 5378254 - 5378313
Alignment:
Q  107 aagcctttttctctttctcttatctcattctcaaaccctag-ccgtcattcctttcttct 165  Q
    ||||||||||||||||| ||| |||  |||||||||||||| |||||| |||||||||||    
T  5378254 aagcctttttctctttcacttctctgcttctcaaaccctagcccgtcactcctttcttct 5378313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 32390691 - 32390652
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtc 272  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  32390691 attttcacatctatttcgttttttattttgtgatttcgtc 32390652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 10924177 - 10924136
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||| |||||| || ||||||||||||||||||||||||||    
T  10924177 atttttacatctatttcgttttttattttgtgatttcgtcgt 10924136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 28500787 - 28500828
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  28500787 attttcacatctatttcgttttttattttgtgatttcttcgt 28500828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 229
Target Start/End: Original strand, 34873848 - 34873905
Alignment:
Q  173 ggaggggtgatttagggtcaa-tttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||||||||| ||||| | | ||||||| || |||||||||||||||    
T  34873848 ggaggggtgatttagggtcaatttttttatcgaaaatcacccttctaactcgtttttc 34873905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 6682082 - 6682030
Alignment:
Q  114 tttctctttctcttatctcattctcaaaccctagccgtcattcctttcttctt 166  Q
    ||||||| ||||||||||  ||||||||||| | ||||||| |||||||||||    
T  6682082 tttctctctctcttatctacttctcaaaccccaaccgtcatccctttcttctt 6682030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 15710532 - 15710587
Alignment:
Q  177 gggtgatttagggtcaatttttg--acccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||| |||||||||||   | ||||||||| |||||||||||||||||||    
T  15710532 gggtgatttatggtcaattttttttatccaaaatcacccctctaactcgtttttct 15710587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 22397667 - 22397619
Alignment:
Q  180 tgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||| ||||| | |||||||||  ||||||||||||||    
T  22397667 tgatttagggtcaatatttgatcgaaaatcatcaatctaactcgttttt 22397619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 153
Target Start/End: Complemental strand, 39180027 - 39179987
Alignment:
Q  113 ttttctctttctcttatctcattctcaaaccctagccgtca 153  Q
    |||| ||| |||||| |||||||||||||||||||||||||    
T  39180027 ttttatctctctcttctctcattctcaaaccctagccgtca 39179987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 40565280 - 40565224
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||| ||||||||  ||||||||||| |||||| | |||||| ||||||||||    
T  40565280 gaggggtggtttagggttgatttttgaccccaaatcacctctctaaatcgtttttct 40565224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 41063509 - 41063465
Alignment:
Q  186 agggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||| ||||||||  | ||||||||||||||||    
T  41063509 agggtcaatttttgactcaaaatcactcatctaactcgtttttct 41063465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 52555887 - 52555788
Alignment:
Q  133 attctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||| |||  ||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||    
T  52555887 attctcaaactctaatcgtcactcctttcttcttttcgtcggaggggtgatttagggacaatttttgacccaaaatcacctctctaactcgtttttctat 52555788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 200
Target Start/End: Complemental strand, 46717095 - 46717002
Alignment:
Q  107 aagcctttttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttga 200  Q
    ||||||||||||||||||||| |||| ||||||||  |||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  46717095 aagcctttttctctttctcttctctccttctcaaattctagtcgtcactcctttcttcttttcatcggatgggtgatttagggtcaatttttga 46717002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 232
Target Start/End: Original strand, 42971992 - 42972085
Alignment:
Q  139 aaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||  | ||||||| ||||||||||    
T  42971992 aaaccctagccgtcactcctttcttgttttcgtcggaagggtgatttagggtcaatttttgacccaaaatcactcatctaacttgtttttctat 42972085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 173 - 232
Target Start/End: Complemental strand, 23067974 - 23067915
Alignment:
Q  173 ggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  23067974 ggaggggtgatttagggtcaatttttgaccctaaatcacccctctaactcgtttttctat 23067915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 28588553 - 28588606
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28588553 gggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 28588606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 9661842 - 9661898
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  9661842 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttct 9661898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 174 - 229
Target Start/End: Complemental strand, 14542637 - 14542582
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||    
T  14542637 gaggggtgatttagggtcaatttttgacccaaaatcatctctctaacttgtttttc 14542582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 54420834 - 54420779
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  54420834 gggtgatttagggtcaatttttgacccaaaatcactcctctaactcgtttttctat 54420779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 16991865 - 16991919
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||||||||||||||| || ||||||||||||||||||    
T  16991865 ggtgatttagggtcaatttttgacccaaaatcacccatctaactcgtttttctat 16991919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 3673612 - 3673668
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  3673612 gaggggtgatttagggtcaatttttgaccccaaatcacccctctaaatcgtttttct 3673668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 41486564 - 41486620
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  41486564 gaggggttatttagggtcaatttttgatccaaaatcacccctctaactcgtttttct 41486620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 4634272 - 4634327
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||    
T  4634272 gaggggtgatttaaggtcaatttttgacccaaaatcacccctctaacttgtttttc 4634327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 46729044 - 46728987
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||    
T  46729044 gaggggtgatttagggtcaatttttgacccaaaatca-ccctctaatttgtttttctat 46728987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 4959697 - 4959644
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||    
T  4959697 gggtgatttagggtcaatttttgatccaaaatcatcactctaactcatttttct 4959644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 23067892 - 23067851
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23067892 attttcacatctgttacgttttttattttgtgatttcgtcgt 23067851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 230
Target Start/End: Complemental strand, 1646060 - 1646010
Alignment:
Q  180 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||||||    
T  1646060 tgatttagggttaattgttgacccaaaatcacccctctaactcgtttttct 1646010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 3169033 - 3169083
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  3169033 ggtgatttagagtcaattattgacccaaaatcacccctctaactcgttttt 3169083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 43156765 - 43156819
Alignment:
Q  174 gaggggtgattta-gggtcaatttttgacccaaaatcatccctctaactcgtttt 227  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||    
T  43156765 gaggggtgatttacgggtcaatttttgacccaaaatcacccctctaacacgtttt 43156819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 478205 - 478121
Alignment:
Q  122 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 207  Q
    |||||| |||| ||||||||||||||||||||  ||||||||||| |  |  ||||||||||||| |||||| |||||||||||||    
T  478205 tctcttctctccttctcaaaccctagccgtcacccctttcttcttctttttagaggggtgatttatggtcaa-ttttgacccaaaa 478121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 178 - 219
Target Start/End: Complemental strand, 1657691 - 1657650
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaa 219  Q
    ||||||||||||||||||||||||||||||||| ||||||||    
T  1657691 ggtgatttagggtcaatttttgacccaaaatcacccctctaa 1657650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 5388504 - 5388560
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||| |  |||||| |||||||| ||||||||||    
T  5388504 gaggggtgatttagggtcaatttttgaactcaaatcacccctctaaatcgtttttct 5388560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 34115769 - 34115721
Alignment:
Q  182 atttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||    
T  34115769 atttagggtcaatttttgacccaaaatcacccctctagttcgtttttct 34115721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 394473 - 394384
Alignment:
Q  114 tttctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 207  Q
    ||||||| |||||| |||| ||||||||||||||  ||||  | |||||||||||    ||||||||||||||||||||| |||||||||||||    
T  394473 tttctctctctcttctctctttctcaaaccctagttgtcacccttttcttcttttt---ggaggggtgatttagggtcaa-ttttgacccaaaa 394384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 7242893 - 7242838
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||| |||||||||||||||||||||||||||||| |  ||||||| ||||||||    
T  7242893 aggggcgatttagggtcaatttttgacccaaaatcacctttctaacttgtttttct 7242838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Complemental strand, 43244578 - 43244491
Alignment:
Q  122 tctcttatctcattctcaaaccctagccgtcattcct---ttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 207  Q
    |||||| |||| ||||||||||||||||||||| | |   ||||||||||  |  |||||||||||||||||||| |||||||||||||    
T  43244578 tctcttctctctttctcaaaccctagccgtcatccttttcttcttcttttttttagaggggtgatttagggtcaa-ttttgacccaaaa 43244491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 232
Target Start/End: Complemental strand, 44375401 - 44375331
Alignment:
Q  162 ttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||| ||| || | |||||||| |||||||||||||| ||||||||  ||||||| ||||||||||||    
T  44375401 ttctttttatcagatgagtgatttaaggtcaatttttgactcaaaatcactcctctaattcgtttttctat 44375331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 9474583 - 9474542
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  9474583 attttcacatctatttcgttttttattttgtgatttcgtcgt 9474542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 37869536 - 37869488
Alignment:
Q  179 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||    
T  37869536 gtgatttagggtcaattgtttacc-aaaatcatccctctaactcgttttt 37869488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 42972108 - 42972149
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| ||||||||||||||||||||| |||||||||    
T  42972108 attttcacatttgttacgttttttattttgtggtttcgtcgt 42972149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 50003220 - 50003179
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  50003220 attttcacatctatttcgttttttattttgtgatttcgtcgt 50003179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 52555765 - 52555724
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  52555765 attttcacatcttttacgttttttattttgtgattttgtcgt 52555724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 4622836 - 4622780
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||| ||||||||||||| ||||||||| | || || |||||||||||    
T  4622836 gaggggtgatttaaggtcaatttttgatccaaaatcacctctgtatctcgtttttct 4622780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 11817061 - 11817117
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||| |||||||| || |||||||||||||||| |||||||  ||||||||||    
T  11817061 gaggggtggtttagggttaagttttgacccaaaatcacccctctacatcgtttttct 11817117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 190 - 230
Target Start/End: Complemental strand, 46775965 - 46775925
Alignment:
Q  190 tcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||| ||||| |||||||||||    
T  46775965 tcaatttttgacccaaaatcatcactctatctcgtttttct 46775925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 230
Target Start/End: Complemental strand, 29577209 - 29577154
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||| |||||||| ||||||   ||||||| |||||||||||    
T  29577209 aggggtgatttagggtcactttttgactcaaaatatcccctctatctcgtttttct 29577154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 46716938 - 46716899
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtc 272  Q
    |||||| ||||| |||||||||||||||||||||||||||    
T  46716938 attttcgcatctattacgttttttattttgtgatttcgtc 46716899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 54420755 - 54420716
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  54420755 tttcacatctatttcgttttttattttgtgatttcgtcgt 54420716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 1124929 - 1124979
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||  |||||||||||||||||||||| | |||||||| |||||    
T  1124929 ggtgatttagaatcaatttttgacccaaaatcattcatctaactcattttt 1124979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 6408433 - 6408483
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||| ||||||||||||| ||||||||||| | || ||||||||||||    
T  6408433 ggtgattaagggtcaattttttacccaaaatcacctctttaactcgttttt 6408483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 2945207 - 2945248
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||| ||||    
T  2945207 attttcacatctatttcgttttttattttgtgatttcatcgt 2945248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 9661923 - 9661964
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  9661923 attttcacatctattttgttttttattttgtgatttcgtcgt 9661964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 12519726 - 12519767
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  12519726 attttcacatctattttgttttttattttgtgatttcgtcgt 12519767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 14542556 - 14542515
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  14542556 attttcacatctattttgttttttattttgtgatttcgtcgt 14542515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 166
Target Start/End: Original strand, 24825562 - 24825599
Alignment:
Q  129 tctcattctcaaaccctagccgtcattcctttcttctt 166  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  24825562 tctctttctcaaaccctagccgtcactcctttcttctt 24825599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 228
Target Start/End: Complemental strand, 30416746 - 30416693
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||| ||||| ||||||||||||| |||||||||  ||||||||| ||||||    
T  30416746 aggggtaatttatggtcaatttttgaaccaaaatcacacctctaacttgttttt 30416693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 41486645 - 41486686
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  41486645 attttcacatctatttcgttttttattttgtgattttgtcgt 41486686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 44375308 - 44375267
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  44375308 attttcacatctatttctttttttattttgtgatttcgtcgt 44375267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Original strand, 51646088 - 51646136
Alignment:
Q  180 tgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||| ||||||||||| ||| ||||||| |||||||| ||||||||    
T  51646088 tgatttatggtcaatttttaacctaaaatcacccctctaattcgttttt 51646136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 53903617 - 53903657
Alignment:
Q  192 aatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||||| ||||||  ||||||||||||||||||||    
T  53903617 aatttttgaccctaaatcactcctctaactcgtttttctat 53903657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 8e-30; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 43807315 - 43807217
Alignment:
Q  134 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||||||||| ||| || |||||||||||| |||||| ||||||||| ||||||||||||||||||||||| | |||||||||||||||||||    
T  43807315 ttctcaaaccctagccatcactcttttcttcttttcgtcggagaggtgatttatggtcaatttttgacccaaaatcacctctctaactcgtttttctat 43807217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 116 - 232
Target Start/End: Complemental strand, 30993008 - 30992890
Alignment:
Q  116 tctctttctcttatctcattctc--aaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaatcatcc 213  Q
    |||||||||||| |||| |||||  |||||||| | |||| | ||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||    
T  30993008 tctctttctcttctctccttctctcaaaccctacctgtcacttctttcttcttttcgtcggaggggtgatttaaggttaatttttgacccaaaatcaccc 30992909  T
Q  214 ctctaactcgtttttctat 232  Q
    |||||||| ||||||||||    
T  30992908 ctctaacttgtttttctat 30992890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 24470384 - 24470442
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24470384 gaggggtgatttaggggcaatttttgacccaaaatcacccctctaactcgtttttctat 24470442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 24475332 - 24475390
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  24475332 gaggggtgatttaggggcaatttttgacccaaaatcacccctctaactcgtttttctat 24475390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 25855342 - 25855289
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25855342 gggtgatttagggtcaatttttgatccaaaatcatccctctaactcgtttttct 25855289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 47749723 - 47749779
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||    
T  47749723 gaggggtgatttatggtcaatttttgacccaaaatcacccctctatctcgtttttct 47749779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 40775256 - 40775311
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  40775256 gaggggtgatttagggtcaatttttgatccaaaatcacccctataactcgtttttc 40775311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 49166919 - 49166974
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    
T  49166919 gggtgatttagggtcaatttttgacctaaaatcacccctctaacttgtttttctat 49166974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 7985883 - 7985937
Alignment:
Q  176 ggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||| |||||||| |||| ||||||||||||||||||||||    
T  7985883 ggggtgatttagggtcaacttttgacctaaaaccatccctctaactcgtttttct 7985937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 8611747 - 8611689
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||  |||||||||||| |||| |||||||||||||||||||||    
T  8611747 gaggggtgatttagggtctctttttgacccaatatcacccctctaactcgtttttctat 8611689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 28015345 - 28015399
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||    
T  28015345 gaggggtgatttagggtcaatttttgatccaaaatcacccctctaacttgttttt 28015399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 26017702 - 26017661
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  26017702 attttcacatctgttacgttttttattttgtgatttcgtcgt 26017661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 47156388 - 47156437
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttt 226  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  47156388 gggtgatttaaggtcaatttttgatccaaaatcatccctctaactcgttt 47156437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 29804801 - 29804745
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||| ||||||||||    
T  29804801 gaggggtggtttagggtcaatttttgaccccaaatcacccctctaaatcgtttttct 29804745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 43483583 - 43483637
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||| |||||||||||||||||||||| | |||||||||||||||||| ||||||    
T  43483583 gaggagtgatttagggtcaatttttgatctaaaatcatccctctaacttgttttt 43483637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 30992867 - 30992826
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  30992867 attttcacatctgttacgttttttattttgtgattttgtcgt 30992826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 43807194 - 43807153
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  43807194 attttcacatctgttacgtattttattttgtgatttcgtcgt 43807153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 44681454 - 44681506
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||| ||||||||||||| ||||||| |||||||||||||||||||    
T  44681454 gggtgatttaggttcaatttttgacctaaaatca-ccctctaactcgtttttct 44681506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 21990583 - 21990663
Alignment:
Q  117 ctctttctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 197  Q
    |||| |||||| |||| ||||||||||||||||||||  |||||||  || |  || ||||||||||||||||||||||||    
T  21990583 ctctctctcttctctccttctcaaaccctagccgtcacccctttctctttcttttcagaggggtgatttagggtcaatttt 21990663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 23732518 - 23732462
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||| |||||||||||||| ||||||||   |||||||||||||||||    
T  23732518 gaggggtgatttaaggtcaatttttgactcaaaatcacttctctaactcgtttttct 23732462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 175 - 219
Target Start/End: Complemental strand, 38649482 - 38649438
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatcatccctctaa 219  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||    
T  38649482 aggggtgatttagagtcaatttttgacccaaaatcacccctctaa 38649438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 16263376 - 16263431
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||| ||||||||||| ||||||||| | |||||||| |||||||    
T  16263376 gaggggtgatttaggatcaatttttgatccaaaatcacctctctaacttgtttttc 16263431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 228
Target Start/End: Complemental strand, 35141875 - 35141824
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||||||||||||||| ||||||| || |||||||| |||||    
T  35141875 gggtgatttagggtcaatttttgaccaaaaatcacccttctaactcattttt 35141824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 40761519 - 40761600
Alignment:
Q  122 tctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 207  Q
    |||||| |||| ||| |||||||||||||||   |||||||||||||||   ||||| |||||||||||||| |||||||||||||    
T  40761519 tctcttctctccttcccaaaccctagccgtcgcccctttcttcttttca---gagggatgatttagggtcaa-ttttgacccaaaa 40761600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 197
Target Start/End: Complemental strand, 28665105 - 28665031
Alignment:
Q  123 ctcttatctcattctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 197  Q
    ||||| |||||||||||||||||  ||||||  ||||||||||| |  || || |||||||||||||||||||||    
T  28665105 ctcttctctcattctcaaaccctgaccgtcacccctttcttcttcttgtcagatgggtgatttagggtcaatttt 28665031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 227
Target Start/End: Complemental strand, 21329420 - 21329368
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 227  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||| |||||||    
T  21329420 gaggggtggtttagggtcaatttttgaccc-aaatcacccctctaaatcgtttt 21329368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 33530591 - 33530537
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||  ||||||||| || ||||||||| |||||||||    
T  33530591 gaggggtgatttagggtcaattt--gacccaaaaccacccctctaacccgtttttct 33530537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 14734172 - 14734120
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||  ||||||||    
T  14734172 gggtggtttagggtcaatttttgaccccaaatcacccctctaaaacgtttttc 14734120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 24045353 - 24045301
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||| ||||||||||||||||||||||| || |||||| | |||||||    
T  24045353 ggtgatttaaggtcaatttttgacccaaaatcacccgtctaacacatttttct 24045301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Original strand, 24475414 - 24475453
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  24475414 tttcacatctatttcgttttttattttgtgatttcgtcgt 24475453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Original strand, 40476780 - 40476819
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  40476780 tttcacatctatttcgttttttattttgtgatttcgtcgt 40476819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 228
Target Start/End: Original strand, 8319303 - 8319357
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||| |||||||| |||||| |||||||||||||||| || | ||||||||||||    
T  8319303 gaggagtgatttatggtcaacttttgacccaaaatcacccatgtaactcgttttt 8319357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 231
Target Start/End: Complemental strand, 10250603 - 10250549
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttcta 231  Q
    |||||||  |||||||||||| || ||||||||| |||||||| |||||||||||    
T  10250603 gggtgataaagggtcaattttcgatccaaaatcacccctctaattcgtttttcta 10250549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 42490713 - 42490747
Alignment:
Q  196 tttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||| |||||||||||||||||||    
T  42490713 tttgacccaaaatcacccctctaactcgtttttct 42490747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 271
Target Start/End: Original strand, 47749804 - 47749842
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgt 271  Q
    |||||||||||| || |||||||||||||||||||||||    
T  47749804 attttcacatctatttcgttttttattttgtgatttcgt 47749842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 23732437 - 23732396
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  23732437 attttcacatctattttgttttttattttgtgatttcgtcgt 23732396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 40775337 - 40775378
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  40775337 attttcacatctattttgttttttattttgtgatttcgtcgt 40775378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 5025182 - 5025134
Alignment:
Q  174 gaggggtgatttagggtcaattttt-gacccaaaatcatccctctaact 221  Q
    |||||||||||| | |||||||||| |||||||||||| ||||||||||    
T  5025182 gaggggtgattttgagtcaattttttgacccaaaatcacccctctaact 5025134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 166
Target Start/End: Original strand, 11832939 - 11832983
Alignment:
Q  122 tctcttatctcattctcaaaccctagccgtcattcctttcttctt 166  Q
    |||||| |||| |||||||||||||||||||||  ||||||||||    
T  11832939 tctcttctctccttctcaaaccctagccgtcatctctttcttctt 11832983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 228
Target Start/End: Complemental strand, 26017777 - 26017729
Alignment:
Q  180 tgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||| ||| ||||||||||| ||||||| |||||||| ||||||||    
T  26017777 tgatttatggttaatttttgacctaaaatcacccctctaattcgttttt 26017729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 29805013 - 29804977
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatca 210  Q
    |||||||| ||||||||||||||||||||| ||||||    
T  29805013 gaggggtggtttagggtcaatttttgaccccaaatca 29804977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 20201183 - 20201127
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20201183 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 20201127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 20203365 - 20203309
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  20203365 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttct 20203309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 177 - 232
Target Start/End: Original strand, 50519782 - 50519837
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  50519782 gggtgatttagggtcaatttttgacccaaaatcacccctctaactcgtttttctat 50519837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 1165521 - 1165465
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  1165521 gaggggtgatttagggtcaatttttgacccaaaatcacccctctaacttgtttttct 1165465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 22286874 - 22286816
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||    
T  22286874 gaggggtgatttagggtcaatttttgacctaaaattacccctctaactcgtttttctat 22286816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 41882533 - 41882475
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||| |||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  41882533 gaggagtgatttagggtcaatttttgacccaaaattacccctctaactcgtttttctat 41882475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Original strand, 45664218 - 45664276
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||    
T  45664218 gaggggtgatttaggatcaaattttgacccaaaatcacccctctaactcgtttttctat 45664276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 35501881 - 35501828
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  35501881 gggtgatttagggttaatttttgacccaaaatcacccctctaactcgtttttct 35501828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 25374192 - 25374139
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||||||||||    
T  25374192 gggtgatttagggttaatttttgacctaaaatcacccctctaactcgtttttct 25374139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 1220340 - 1220284
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||| |||||||||||  |||||||| |||||||||||||||||||    
T  1220340 gaggggtgatttaggatcaatttttgattcaaaatcacccctctaactcgtttttct 1220284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 21803519 - 21803575
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||| |||||| || |||||||||||||||||||||| |||||||||||||||||||    
T  21803519 gaggagtgattcagtgtcaatttttgacccaaaatcacccctctaactcgtttttct 21803575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 225
Target Start/End: Original strand, 22844040 - 22844091
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtt 225  Q
    ||||| ||||||| ||||||||||||||||||||||| ||||||||||||||    
T  22844040 gagggctgatttaaggtcaatttttgacccaaaatcacccctctaactcgtt 22844091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 43029672 - 43029727
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttc 229  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||||| |||||||    
T  43029672 gaggggtgatttaggatcattttttgacccaaaatcacccctctaacttgtttttc 43029727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 53426799 - 53426849
Alignment:
Q  180 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||| || |||||||| |||||||||||||||||||    
T  53426799 tgatttagggtcaattttttacgcaaaatcacccctctaactcgtttttct 53426849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 1806585 - 1806529
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||| |||||||||||||||||| || |||||| |||||||| ||||||||||    
T  1806585 gaggggtggtttagggtcaatttttgatcccaaatcacccctctaaatcgtttttct 1806529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 4019591 - 4019646
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||| ||||||| |||||||| | |||||||||||||||||    
T  4019591 gaggggtgatttagggtcaa-ttttgactcaaaatcacctctctaactcgtttttct 4019646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 37051613 - 37051669
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||| ||||||||||||||||||||||||  ||||| |||||||| ||||||||||    
T  37051613 gagggatgatttagggtcaatttttgaccctgaatcacccctctaaatcgtttttct 37051669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 40462116 - 40462064
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||| ||||| |||||||||||||||| |||||||||| ||||||||    
T  40462116 ggtgatttagagtcaaattttgacccaaaatcacccctctaacttgtttttct 40462064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 42106100 - 42106146
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaac 220  Q
    ||||||||||||||||||||||||||||| ||||||| || ||||||    
T  42106100 gaggggtgatttagggtcaatttttgacctaaaatcacccatctaac 42106146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 20251640 - 20251697
Alignment:
Q  174 gaggggtgatttagggtcaatttttg-acccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||| ||||||  ||||||||||| || ||||||||||||||||    
T  20251640 gaggggtgatttagggtcgatttttttacccaaaatcacccttctaactcgtttttct 20251697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 210
Target Start/End: Complemental strand, 25939598 - 25939565
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatca 210  Q
    ||||||||||||||||||||||||||||||||||    
T  25939598 gggtgatttagggtcaatttttgacccaaaatca 25939565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 43242803 - 43242856
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||| |||||||| |||||||| || | ||||||||||||||    
T  43242803 gggtgatttagggtcagtttttgacacaaaatcacccatttaactcgtttttct 43242856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 47914637 - 47914596
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  47914637 attttcacatctatttcgttttttattttgtgatttcgtcgt 47914596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 54240156 - 54240197
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  54240156 attttcacatctatttcgttttttattttgtgatttcgtcgt 54240197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 230
Target Start/End: Complemental strand, 7656592 - 7656546
Alignment:
Q  182 atttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||    
T  7656592 atttagggtcaatttttgaccc-aaatca-ccctctaactcgtttttct 7656546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 3088705 - 3088666
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  3088705 tttcacatctatttcgttttttattttgtgatttcgtcgt 3088666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 274
Target Start/End: Complemental strand, 22286792 - 22286753
Alignment:
Q  235 tttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||| || ||||||||||||||||||||||||||    
T  22286792 tttcacatctatttcgttttttattttgtgatttcgtcgt 22286753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 174 - 217
Target Start/End: Complemental strand, 25631735 - 25631692
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctct 217  Q
    |||||||| ||| |||||||||||||||| ||||||||||||||    
T  25631735 gaggggtggttttgggtcaatttttgacctaaaatcatccctct 25631692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 207
Target Start/End: Complemental strand, 30156468 - 30156399
Alignment:
Q  134 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttttgacccaaaa 207  Q
    ||||||||| ||| || ||| || |||||||||||||   |||||||||||||||||||| |||||||||||||    
T  30156468 ttctcaaactctaaccatcactcatttcttcttttca---gaggggtgatttagggtcaa-ttttgacccaaaa 30156399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 230
Target Start/End: Original strand, 33070152 - 33070199
Alignment:
Q  183 tttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||| |||| |||||| |||||||| ||||||||||    
T  33070152 tttagggtcaatttttaaccccaaatcacccctctaaatcgtttttct 33070199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 233 - 272
Target Start/End: Complemental strand, 43839562 - 43839523
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtc 272  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  43839562 attttcacatctatttcgttttttattttgtgatttcgtc 43839523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 2598076 - 2598126
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||  ||| ||||||||||||||||||  ||||||||||||||||    
T  2598076 ggtgatttaaagtcgatttttgacccaaaatcactcctctaactcgttttt 2598126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 271
Target Start/End: Original strand, 21803600 - 21803638
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgt 271  Q
    |||||||||||| || |||||||||||||||||||||||    
T  21803600 attttcacatctatttcgttttttattttgtgatttcgt 21803638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 233 - 271
Target Start/End: Original strand, 45664291 - 45664329
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgt 271  Q
    |||||||||||| || |||||||||||||||||||||||    
T  45664291 attttcacatctatttcgttttttattttgtgatttcgt 45664329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 1165440 - 1165399
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  1165440 attttcacatctattttgttttttattttgtgatttcgtcgt 1165399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 14741369 - 14741328
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  14741369 attttcacatctatttcattttttattttgtgatttcgtcgt 14741328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 32089974 - 32089933
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || | ||||||||||||||||||||||||    
T  32089974 attttcacatctatttcattttttattttgtgatttcgtcgt 32089933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 34766973 - 34767024
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||| ||| || |||||||||||| |||||||||||||||||||    
T  34766973 gggtgatttagggttaatatt-gacccaaaatca-ccctctaactcgtttttct 34767024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 35501803 - 35501762
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| || |||||||||||||||||||| |||||    
T  35501803 attttcacatctatttcgttttttattttgtgattttgtcgt 35501762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 228
Target Start/End: Original strand, 40797023 - 40797075
Alignment:
Q  175 aggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    |||||||||||||||| || |||||| ||||||||| |||||||||| ||||||    
T  40797023 aggggtgatttagggttaa-ttttgagccaaaatcacccctctaacttgttttt 40797075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 43029753 - 43029794
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  43029753 attttcacatctattttgttttttattttgtgatttcgtcgt 43029794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 43839638 - 43839587
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||||| ||||||    
T  43839638 gggtgatttagggtcaatttttga-ccaaagtca-ccctctaactcgcttttct 43839587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 230
Target Start/End: Complemental strand, 29182705 - 29182677
Alignment:
Q  202 ccaaaatcatccctctaactcgtttttct 230  Q
    |||||||||||||||||||||||||||||    
T  29182705 ccaaaatcatccctctaactcgtttttct 29182677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 178 - 228
Target Start/End: Complemental strand, 33978041 - 33977994
Alignment:
Q  178 ggtgatttagggtcaatttttgacccaaaatcatccctctaactcgttttt 228  Q
    ||||||||| |||||||||||||||||||   |||||| ||||||||||||    
T  33978041 ggtgatttaaggtcaatttttgacccaaa---atccctttaactcgttttt 33977994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 174 - 232
Target Start/End: Complemental strand, 9773 - 9715
Alignment:
Q  174 gaggggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  9773 gagggatgatttagggtcaatttttgacccaaaatcactcctctaactcgtttttctat 9715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1294 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1294
Description:

Target: scaffold1294; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 774 - 822
Alignment:
Q  179 gtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttt 227  Q
    |||||||| ||||||||||||||| ||||||||| ||||||||||||||    
T  774 gtgatttaaggtcaatttttgaccaaaaatcatcactctaactcgtttt 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 180 - 232
Target Start/End: Complemental strand, 11896 - 11844
Alignment:
Q  180 tgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttctat 232  Q
    |||||||| ||||||||||||||||||||||  | ||||||||||||||||||    
T  11896 tgatttagtgtcaatttttgacccaaaatcactcatctaactcgtttttctat 11844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 184 - 230
Target Start/End: Complemental strand, 12318 - 12272
Alignment:
Q  184 ttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  12318 ttagggtcaatttttgacccaaaatcatctctctagctcgttcttct 12272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 12247 - 12206
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    ||||||||| || || ||||||||||||||||||||||||||    
T  12247 attttcacacctatttcgttttttattttgtgatttcgtcgt 12206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 11011 - 11064
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctctaactcgtttttct 230  Q
    ||||||||| |||||||||||||||  ||||||| ||||||||||| |||||||    
T  11011 gggtgattttgggtcaatttttgacttaaaatcacccctctaactcatttttct 11064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 217
Target Start/End: Complemental strand, 1213 - 1174
Alignment:
Q  177 gggtgatttagggtcaatttttgacccaaaatcatccctct 217  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  1213 gggtgatttagg-tcaatttttgacccaaaatcatccctct 1174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 134 - 197
Target Start/End: Original strand, 2839 - 2902
Alignment:
Q  134 ttctcaaaccctagccgtcattcctttcttcttttcatcggaggggtgatttagggtcaatttt 197  Q
    |||||||||||||| |||||  ||||||||||| |  |  ||||||||||||||||||||||||    
T  2839 ttctcaaaccctagtcgtcacccctttcttcttcttgttagaggggtgatttagggtcaatttt 2902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 233 - 274
Target Start/End: Complemental strand, 1185 - 1144
Alignment:
Q  233 attttcacatctgttacgttttttattttgtgatttcgtcgt 274  Q
    |||||||||||| ||  |||||||||||||||||||||||||    
T  1185 attttcacatctattttgttttttattttgtgatttcgtcgt 1144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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