View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17856_low_9 (Length: 281)

Name: NF17856_low_9
Description: NF17856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17856_low_9
NF17856_low_9
[»] chr7 (49 HSPs)
chr7 (20-177)||(13880827-13880984)
chr7 (5-183)||(9097994-9098172)
chr7 (50-190)||(13880327-13880468)
chr7 (50-190)||(11319628-11319769)
chr7 (54-176)||(30026128-30026251)
chr7 (50-199)||(19236806-19236956)
chr7 (50-190)||(10882967-10883108)
chr7 (50-194)||(28409257-28409398)
chr7 (50-176)||(44467288-44467414)
chr7 (50-191)||(13031881-13032021)
chr7 (50-199)||(13692554-13692705)
chr7 (50-192)||(12366544-12366687)
chr7 (56-199)||(13260424-13260569)
chr7 (50-130)||(48800435-48800515)
chr7 (54-176)||(2500261-2500385)
chr7 (50-176)||(13648935-13649063)
chr7 (50-175)||(2913415-2913542)
chr7 (50-162)||(4494725-4494837)
chr7 (50-162)||(13018318-13018429)
chr7 (50-113)||(13890740-13890803)
chr7 (54-175)||(14426752-14426874)
chr7 (50-127)||(15088776-15088853)
chr7 (54-174)||(16542835-16542955)
chr7 (54-174)||(16622707-16622827)
chr7 (50-162)||(29935172-29935283)
chr7 (50-152)||(13137718-13137821)
chr7 (50-191)||(14193296-14193443)
chr7 (129-199)||(16316433-16316503)
chr7 (50-199)||(22577814-22577967)
chr7 (50-98)||(13172191-13172239)
chr7 (50-175)||(33691520-33691646)
chr7 (50-190)||(11793130-11793271)
chr7 (50-98)||(16307529-16307575)
chr7 (50-127)||(16316370-16316447)
chr7 (56-176)||(30945189-30945310)
chr7 (54-161)||(9709631-9709739)
chr7 (76-182)||(5000675-5000782)
chr7 (90-176)||(21381287-21381374)
chr7 (50-117)||(21695667-21695734)
chr7 (50-116)||(39284389-39284456)
chr7 (120-190)||(13303061-13303131)
chr7 (129-183)||(15468146-15468200)
chr7 (50-127)||(41842100-41842178)
chr7 (90-177)||(48062663-48062752)
chr7 (90-176)||(27871931-27872019)
chr7 (42-98)||(16412327-16412383)
chr7 (120-176)||(24788347-24788403)
chr7 (54-114)||(35952469-35952529)
chr7 (120-176)||(39284444-39284500)
[»] scaffold0004 (3 HSPs)
scaffold0004 (5-199)||(243952-244146)
scaffold0004 (50-190)||(220464-220605)
scaffold0004 (138-190)||(377391-377443)
[»] scaffold0081 (1 HSPs)
scaffold0081 (18-199)||(40863-41044)
[»] chr3 (46 HSPs)
chr3 (18-198)||(16199572-16199752)
chr3 (20-162)||(19249175-19249318)
chr3 (5-199)||(20725301-20725504)
chr3 (50-188)||(41495202-41495341)
chr3 (50-190)||(15903425-15903566)
chr3 (50-190)||(52920631-52920772)
chr3 (50-192)||(13824256-13824401)
chr3 (50-198)||(14392798-14392947)
chr3 (50-190)||(20646381-20646522)
chr3 (50-190)||(22803893-22804033)
chr3 (50-191)||(6090957-6091099)
chr3 (50-177)||(12962893-12963021)
chr3 (50-177)||(37467541-37467669)
chr3 (18-113)||(12388636-12388731)
chr3 (57-175)||(17238753-17238871)
chr3 (50-190)||(13948562-13948703)
chr3 (51-190)||(31303612-31303755)
chr3 (53-190)||(29951234-29951371)
chr3 (53-190)||(30000388-30000525)
chr3 (22-114)||(26417456-26417547)
chr3 (50-127)||(49642571-49642648)
chr3 (50-98)||(8728818-8728866)
chr3 (50-98)||(9080705-9080753)
chr3 (43-131)||(12968626-12968713)
chr3 (42-98)||(14073003-14073059)
chr3 (82-190)||(25398098-25398208)
chr3 (54-99)||(4243002-4243047)
chr3 (50-127)||(16032770-16032847)
chr3 (134-198)||(12388735-12388799)
chr3 (50-177)||(28582346-28582474)
chr3 (54-161)||(47405247-47405356)
chr3 (54-127)||(20627275-20627348)
chr3 (46-110)||(49553276-49553341)
chr3 (77-176)||(2561414-2561514)
chr3 (143-190)||(49642648-49642695)
chr3 (5-98)||(12397430-12397522)
chr3 (50-98)||(16305005-16305051)
chr3 (45-86)||(19197655-19197696)
chr3 (54-127)||(40800116-40800189)
chr3 (129-177)||(2785318-2785366)
chr3 (42-98)||(10852077-10852133)
chr3 (42-98)||(17697876-17697932)
chr3 (129-177)||(21636552-21636600)
chr3 (54-114)||(47208013-47208073)
chr3 (129-177)||(49666288-49666336)
chr3 (54-114)||(50300521-50300581)
[»] chr4 (32 HSPs)
chr4 (20-199)||(6641893-6642072)
chr4 (18-132)||(17540698-17540812)
chr4 (23-162)||(41114474-41114615)
chr4 (18-126)||(11916006-11916114)
chr4 (50-197)||(14604657-14604805)
chr4 (22-131)||(17787760-17787868)
chr4 (50-198)||(16632651-16632800)
chr4 (50-177)||(37435271-37435399)
chr4 (50-177)||(56034792-56034920)
chr4 (50-190)||(15139449-15139590)
chr4 (54-190)||(45833615-45833753)
chr4 (42-99)||(11901528-11901585)
chr4 (50-162)||(29680308-29680421)
chr4 (54-177)||(9141095-9141220)
chr4 (50-162)||(19620842-19620955)
chr4 (50-130)||(3395907-3395987)
chr4 (50-198)||(12601312-12601462)
chr4 (50-127)||(12810944-12811021)
chr4 (54-126)||(10073208-10073280)
chr4 (54-176)||(19884922-19885048)
chr4 (120-190)||(40846320-40846390)
chr4 (50-127)||(40846367-40846445)
chr4 (50-99)||(10250134-10250183)
chr4 (50-127)||(55380527-55380604)
chr4 (54-161)||(13575898-13576006)
chr4 (54-161)||(54680147-54680255)
chr4 (120-176)||(55380494-55380550)
chr4 (129-176)||(17398529-17398576)
chr4 (134-176)||(6517704-6517746)
chr4 (42-99)||(12417357-12417414)
chr4 (50-111)||(14904069-14904130)
chr4 (54-176)||(29121608-29121732)
[»] chr6 (44 HSPs)
chr6 (18-183)||(10640186-10640351)
chr6 (50-191)||(13435758-13435900)
chr6 (51-191)||(23284790-23284930)
chr6 (54-199)||(24117045-24117192)
chr6 (59-155)||(3680739-3680835)
chr6 (50-189)||(9718071-9718211)
chr6 (5-198)||(26943781-26943958)
chr6 (112-198)||(19470886-19470972)
chr6 (50-176)||(20112495-20112621)
chr6 (40-98)||(25592838-25592896)
chr6 (50-162)||(19624217-19624330)
chr6 (50-162)||(14100254-14100366)
chr6 (50-130)||(19086438-19086518)
chr6 (22-101)||(19473115-19473194)
chr6 (50-175)||(34451465-34451592)
chr6 (42-97)||(19876107-19876162)
chr6 (33-99)||(23298259-23298324)
chr6 (50-130)||(26971991-26972071)
chr6 (53-177)||(12715219-12715344)
chr6 (45-96)||(16462429-16462480)
chr6 (54-176)||(21235338-21235461)
chr6 (50-190)||(21625325-21625466)
chr6 (120-183)||(25597713-25597776)
chr6 (90-176)||(33351766-33351853)
chr6 (129-183)||(13602406-13602460)
chr6 (50-127)||(13602446-13602523)
chr6 (42-98)||(17445477-17445534)
chr6 (50-111)||(19689023-19689084)
chr6 (42-98)||(32336091-32336145)
chr6 (42-98)||(7812314-7812370)
chr6 (22-98)||(17928117-17928192)
chr6 (50-98)||(18171814-18171862)
chr6 (50-98)||(24718549-24718597)
chr6 (50-168)||(15302418-15302539)
chr6 (50-117)||(15987495-15987562)
chr6 (54-176)||(20730505-20730628)
chr6 (52-98)||(23005838-23005884)
chr6 (52-98)||(23782482-23782528)
chr6 (42-99)||(12348434-12348491)
chr6 (50-127)||(25597753-25597830)
chr6 (54-111)||(32544575-32544632)
chr6 (57-176)||(16264954-16265074)
chr6 (54-98)||(24728352-24728396)
chr6 (54-177)||(29918240-29918367)
[»] scaffold0364 (1 HSPs)
scaffold0364 (5-177)||(6230-6402)
[»] chr1 (32 HSPs)
chr1 (20-198)||(21191564-21191741)
chr1 (5-132)||(18896256-18896383)
chr1 (33-177)||(17024678-17024822)
chr1 (50-199)||(12613508-12613658)
chr1 (50-174)||(26701856-26701981)
chr1 (50-176)||(16235024-16235152)
chr1 (50-194)||(2268749-2268895)
chr1 (54-190)||(22599898-22600036)
chr1 (50-177)||(10757645-10757771)
chr1 (82-176)||(21029019-21029113)
chr1 (56-199)||(33256071-33256216)
chr1 (56-199)||(33276243-33276388)
chr1 (5-98)||(24227658-24227749)
chr1 (120-199)||(19717739-19717818)
chr1 (50-129)||(22154162-22154241)
chr1 (82-190)||(35402033-35402143)
chr1 (76-177)||(12284678-12284780)
chr1 (50-111)||(36134480-36134541)
chr1 (42-98)||(1090258-1090314)
chr1 (42-98)||(20109680-20109736)
chr1 (50-168)||(30893310-30893430)
chr1 (50-111)||(1900639-1900700)
chr1 (50-127)||(19717795-19717872)
chr1 (56-117)||(20954173-20954234)
chr1 (50-127)||(48704490-48704567)
chr1 (54-176)||(2267296-2267419)
chr1 (82-190)||(23036273-23036383)
chr1 (90-177)||(46089218-46089307)
chr1 (50-95)||(16870278-16870323)
chr1 (129-190)||(20954266-20954327)
chr1 (138-175)||(21134986-21135023)
chr1 (50-114)||(32785665-32785729)
[»] chr2 (47 HSPs)
chr2 (23-199)||(22272342-22272519)
chr2 (18-125)||(19115411-19115518)
chr2 (23-162)||(44881398-44881539)
chr2 (5-125)||(26618800-26618920)
chr2 (50-190)||(24850404-24850544)
chr2 (18-120)||(18703064-18703166)
chr2 (21-127)||(41121463-41121569)
chr2 (50-190)||(22454728-22454869)
chr2 (50-190)||(23235228-23235369)
chr2 (50-190)||(30667210-30667351)
chr2 (50-176)||(39037394-39037521)
chr2 (50-176)||(25829338-25829466)
chr2 (50-191)||(9015109-9015251)
chr2 (50-126)||(18430677-18430753)
chr2 (54-162)||(19540648-19540756)
chr2 (50-199)||(22260616-22260767)
chr2 (50-176)||(24576284-24576411)
chr2 (76-199)||(40782681-40782806)
chr2 (54-176)||(20151792-20151915)
chr2 (50-189)||(20568487-20568628)
chr2 (76-190)||(28140399-28140515)
chr2 (120-199)||(10009560-10009639)
chr2 (42-97)||(20569774-20569829)
chr2 (54-189)||(21536991-21537126)
chr2 (120-190)||(22187911-22187981)
chr2 (50-127)||(18376675-18376752)
chr2 (50-111)||(38781681-38781742)
chr2 (50-161)||(30621437-30621549)
chr2 (50-161)||(30624058-30624170)
chr2 (138-190)||(38781618-38781670)
chr2 (54-176)||(6573880-6574003)
chr2 (50-98)||(24302694-24302742)
chr2 (50-98)||(24440503-24440551)
chr2 (129-177)||(44840639-44840687)
chr2 (68-127)||(23184103-23184162)
chr2 (68-127)||(23595360-23595419)
chr2 (157-199)||(7609172-7609214)
chr2 (45-99)||(21846404-21846458)
chr2 (148-190)||(25037096-25037138)
chr2 (148-190)||(25041203-25041245)
chr2 (50-127)||(25189637-25189715)
chr2 (54-127)||(22187861-22187934)
chr2 (50-130)||(25037006-25037086)
chr2 (50-130)||(25041113-25041193)
chr2 (50-86)||(25918931-25918967)
chr2 (129-177)||(33074459-33074507)
chr2 (50-126)||(38631240-38631316)
[»] scaffold0064 (1 HSPs)
scaffold0064 (54-199)||(43652-43798)
[»] chr8 (40 HSPs)
chr8 (18-192)||(19707720-19707894)
chr8 (50-196)||(18730767-18730914)
chr8 (5-132)||(22461376-22461503)
chr8 (50-175)||(18685202-18685328)
chr8 (50-199)||(20382187-20382337)
chr8 (50-196)||(18722422-18722569)
chr8 (41-177)||(19956133-19956270)
chr8 (22-199)||(33083065-33083245)
chr8 (50-199)||(17267681-17267831)
chr8 (50-190)||(17914678-17914819)
chr8 (50-190)||(19943456-19943597)
chr8 (20-132)||(18772906-18773017)
chr8 (50-176)||(19156415-19156542)
chr8 (50-176)||(602526-602652)
chr8 (50-162)||(17441614-17441727)
chr8 (50-190)||(20255359-20255500)
chr8 (50-198)||(16681097-16681245)
chr8 (54-190)||(24646557-24646693)
chr8 (52-199)||(17525523-17525671)
chr8 (56-183)||(29693541-29693671)
chr8 (5-98)||(23772679-23772770)
chr8 (50-190)||(39693754-39693895)
chr8 (50-141)||(16189267-16189359)
chr8 (50-130)||(17702006-17702086)
chr8 (50-162)||(18120915-18121028)
chr8 (143-199)||(16189192-16189248)
chr8 (50-130)||(21933181-21933261)
chr8 (138-197)||(23263493-23263552)
chr8 (76-177)||(18680031-18680132)
chr8 (120-190)||(22745706-22745776)
chr8 (50-127)||(18320982-18321059)
chr8 (42-98)||(26833360-26833416)
chr8 (54-114)||(30421237-30421297)
chr8 (50-117)||(22745763-22745830)
chr8 (50-102)||(16207563-16207615)
chr8 (50-98)||(17916621-17916668)
chr8 (129-177)||(36105441-36105489)
chr8 (129-177)||(40845260-40845308)
chr8 (129-177)||(43640005-43640053)
chr8 (54-160)||(43645081-43645189)
[»] scaffold0056 (2 HSPs)
scaffold0056 (23-199)||(35898-36080)
scaffold0056 (129-177)||(25498-25546)
[»] scaffold0022 (3 HSPs)
scaffold0022 (39-198)||(159288-159446)
scaffold0022 (50-176)||(39652-39779)
scaffold0022 (50-176)||(137712-137839)
[»] scaffold0005 (1 HSPs)
scaffold0005 (50-197)||(212573-212721)
[»] scaffold0334 (1 HSPs)
scaffold0334 (50-199)||(10011-10161)
[»] scaffold0290 (1 HSPs)
scaffold0290 (54-183)||(18368-18498)
[»] scaffold0035 (1 HSPs)
scaffold0035 (54-199)||(19221-19367)
[»] scaffold0116 (1 HSPs)
scaffold0116 (50-190)||(20714-20855)
[»] scaffold0040 (2 HSPs)
scaffold0040 (5-162)||(1203-1360)
scaffold0040 (49-86)||(3780-3817)
[»] scaffold0359 (1 HSPs)
scaffold0359 (50-200)||(5434-5586)
[»] chr5 (27 HSPs)
chr5 (50-190)||(23881289-23881429)
chr5 (57-183)||(642488-642615)
chr5 (54-190)||(21099482-21099619)
chr5 (50-175)||(89226-89352)
chr5 (50-199)||(17815180-17815331)
chr5 (5-113)||(25096555-25096663)
chr5 (5-113)||(25154525-25154633)
chr5 (50-176)||(21910762-21910890)
chr5 (56-176)||(26784577-26784699)
chr5 (68-176)||(9398551-9398659)
chr5 (57-154)||(6499480-6499578)
chr5 (50-127)||(23412780-23412857)
chr5 (54-176)||(33022885-33023008)
chr5 (54-175)||(5430106-5430228)
chr5 (50-127)||(20551148-20551226)
chr5 (5-80)||(22403848-22403925)
chr5 (51-127)||(12352608-12352685)
chr5 (54-176)||(4887243-4887367)
chr5 (129-192)||(19536155-19536218)
chr5 (120-190)||(20551101-20551171)
chr5 (134-199)||(25096667-25096732)
chr5 (134-199)||(25154637-25154702)
chr5 (50-162)||(21072030-21072142)
chr5 (90-177)||(29138222-29138310)
chr5 (50-117)||(7745436-7745503)
chr5 (90-176)||(30115704-30115792)
chr5 (54-114)||(31118160-31118220)
[»] scaffold0861 (1 HSPs)
scaffold0861 (50-183)||(4690-4824)
[»] scaffold0025 (1 HSPs)
scaffold0025 (5-127)||(74854-74976)
[»] scaffold0120 (2 HSPs)
scaffold0120 (54-191)||(36523-36660)
scaffold0120 (54-191)||(42345-42482)
[»] scaffold0047 (1 HSPs)
scaffold0047 (5-117)||(10169-10281)
[»] scaffold0273 (1 HSPs)
scaffold0273 (5-132)||(8109-8241)
[»] scaffold0020 (1 HSPs)
scaffold0020 (5-132)||(145150-145276)
[»] scaffold0411 (1 HSPs)
scaffold0411 (50-189)||(12437-12578)
[»] scaffold0146 (1 HSPs)
scaffold0146 (57-175)||(15328-15446)
[»] scaffold0771 (1 HSPs)
scaffold0771 (50-190)||(702-843)
[»] scaffold0171 (1 HSPs)
scaffold0171 (50-177)||(27188-27316)
[»] scaffold0065 (1 HSPs)
scaffold0065 (50-176)||(1944-2071)
[»] scaffold0161 (1 HSPs)
scaffold0161 (49-155)||(9879-9985)
[»] scaffold0084 (2 HSPs)
scaffold0084 (50-176)||(32712-32840)
scaffold0084 (53-97)||(49638-49682)
[»] scaffold0003 (2 HSPs)
scaffold0003 (54-176)||(89818-89941)
scaffold0003 (42-98)||(1039-1095)
[»] scaffold1434 (1 HSPs)
scaffold1434 (76-199)||(556-681)
[»] scaffold0026 (4 HSPs)
scaffold0026 (50-176)||(8136-8264)
scaffold0026 (50-199)||(60232-60383)
scaffold0026 (138-199)||(151722-151783)
scaffold0026 (121-199)||(115737-115816)
[»] scaffold0337 (1 HSPs)
scaffold0337 (50-176)||(14902-15029)
[»] scaffold0193 (1 HSPs)
scaffold0193 (66-190)||(16005-16131)
[»] scaffold1359 (1 HSPs)
scaffold1359 (54-175)||(435-557)
[»] scaffold0485 (2 HSPs)
scaffold0485 (50-141)||(9120-9211)
scaffold0485 (150-199)||(9252-9301)
[»] scaffold0076 (1 HSPs)
scaffold0076 (229-281)||(14326-14378)
[»] scaffold0426 (1 HSPs)
scaffold0426 (50-177)||(13850-13979)
[»] scaffold0324 (1 HSPs)
scaffold0324 (50-127)||(10228-10306)
[»] scaffold0261 (1 HSPs)
scaffold0261 (50-176)||(5697-5823)
[»] scaffold0210 (1 HSPs)
scaffold0210 (53-176)||(1870-1995)
[»] scaffold0916 (1 HSPs)
scaffold0916 (5-99)||(2342-2438)
[»] scaffold0473 (1 HSPs)
scaffold0473 (90-176)||(2510-2598)
[»] scaffold0066 (1 HSPs)
scaffold0066 (76-162)||(60654-60740)
[»] scaffold0083 (1 HSPs)
scaffold0083 (50-127)||(25735-25812)
[»] scaffold0251 (1 HSPs)
scaffold0251 (50-114)||(7993-8057)
[»] scaffold0217 (1 HSPs)
scaffold0217 (50-114)||(19338-19402)
[»] scaffold0007 (1 HSPs)
scaffold0007 (50-114)||(143394-143458)
[»] scaffold0522 (2 HSPs)
scaffold0522 (49-95)||(4015-4061)
scaffold0522 (49-95)||(11298-11344)
[»] scaffold0490 (1 HSPs)
scaffold0490 (49-98)||(7637-7686)
[»] scaffold0479 (1 HSPs)
scaffold0479 (120-177)||(10193-10250)
[»] scaffold0395 (1 HSPs)
scaffold0395 (77-190)||(13304-13417)
[»] scaffold0388 (1 HSPs)
scaffold0388 (50-79)||(4749-4778)
[»] scaffold0471 (1 HSPs)
scaffold0471 (129-177)||(3558-3606)
[»] scaffold0201 (1 HSPs)
scaffold0201 (42-98)||(19359-19415)
[»] scaffold0043 (1 HSPs)
scaffold0043 (50-86)||(1666-1702)


Alignment Details
Target: chr7 (Bit Score: 114; Significance: 7e-58; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 13880984 - 13880827
Alignment:
Q  20 acaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggt 119  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||    
T  13880984 acaaaaatttagtgtctccttaaagcaaaggttctggaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagtggt 13880885  T
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    | ||||||||||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  13880884 tatgaagtcaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 13880827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 183
Target Start/End: Original strand, 9097994 - 9098172
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || ||||||||||||| |||||| || |||| ||  |||||||||||||||||||||||||||||| ||||||| ||||||||||||| |    
T  9097994 tgtgcaggaccatagacaaaaatttaatgtctctttgaagcttagattctggaagaacaaatgagagcaatggaatcaacaagatggaagcttgaagcat 9098093  T
Q  105 gtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcat 183  Q
     |||||||||| |||||||||||||||| ||| |||| |||||| |||||| |||||||| |||| ||||||| |||||    
T  9098094 ctgaagaaaagaggttctgaagtcaagtgctcctgaagtgatgatgtcatcagaagcaagttcattagaagcacctcat 9098172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 13880468 - 13880327
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| ||||| |||||||||| |||| ||| |||| ||||||    
T  13880468 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgcttctgaagtcaaagtgctcctgaagtgatga 13880369  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    | ||||| |||||||| |||||||||||||||||| ||||||    
T  13880368 catcatcagaagcaagttcatcagaagcatctcatcagaagc 13880327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 11319769 - 11319628
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||||| ||| ||||| |||||||||| |||||| |||||| ||||| | |||||| | |||| ||| |||| ||||||    
T  11319769 gttctggaagaacaaaagagagcaatgaaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagccaaagtgctcctgaagtgatga 11319670  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||   ||||||| |||||||||||||||||| ||||||    
T  11319669 cgtcattaaaagcaagttcatcagaagcatctcatcagaagc 11319628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 30026251 - 30026128
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt-caagttctcttgaaatgatgacgtc 152  Q
    |||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| |||||||||  |||| ||| |||| ||||||||||    
T  30026251 tggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaagtaaaagtgctcctgaagtgatgacgtc 30026152  T
Q  153 atcggaagcaagatcatcagaagc 176  Q
    ||| |||||||| |||||||||||    
T  30026151 atcagaagcaagttcatcagaagc 30026128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 19236806 - 19236956
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||||||||||||||| | |||  ||||||| ||||| |||||||| |||||| | ||||||| |||| || ||||||||||| ||  |||| ||||||    
T  19236806 gttctggaagaacaaattaagagttatggaatcaacaaaaaggaagcctgaagcatctgaagaatagtgattttgaagtcaagtgcttctgaagtgatga 19236905  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||||||| |||||||| || |||||| || ||||| |||||||||||||||    
T  19236906 cgtcatcagaagcaagttcgtcagaaccacctcatcagaagcaacatcacc 19236956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 10882967 - 10883108
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||||| || ||||||| |||||| |||||| ||||| | |||||||| |||| ||| |||| ||| ||    
T  10882967 gttctggaagaacaaaagagagcaaaggaatcaacaaaaatgaagcttaaagcgtctgaagagaagtgctactgaagtcaaagtgctcctgaagtgacga 10883066  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||| || |||||||| |||||||||||||| ||| ||||||    
T  10883067 cgtcgtcagaagcaagttcatcagaagcatcccatcagaagc 10883108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 28409398 - 28409257
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||||| ||||||||| ||||||||  ||||  |||| ||||||| ||||||||| |||||| ||||| |  ||||   |||| ||| |||| |||||||    
T  28409398 gttctgtaagaacaaaagagagcaaatgaatcgacaaaaaggaagtttgaagcgtctgaagagaagtgctattgaa---aagtgctcctgaagtgatgac 28409302  T
Q  150 gtcatcggaagcaagatcatcagaagcatctcattagaagcaaca 194  Q
    |||||| |||||||| |||||||||||||||||| ||||||||||    
T  28409301 gtcatcagaagcaagttcatcagaagcatctcatcagaagcaaca 28409257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 44467414 - 44467288
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    ||||||||||||||||  ||||||||||||| ||||| ||||||| ||||||| | |||||| ||||| | |||||||  ||| ||| |||| |||||||    
T  44467414 gttctggaagaacaaaatagagcaatggaatcaacaaaaaggaagtttgaagcatctgaagagaagtgctcctgaagtatagtgctcctgaagtgatgac 44467315  T
Q  150 gtcatcggaagcaagatcatcagaagc 176  Q
    | |||| |||||||| |||||||||||    
T  44467314 gccatcagaagcaagttcatcagaagc 44467288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 13031881 - 13032021
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||||||||||||||| |||||||||||||| |||||| | |||||||||||||| |||||||||||| | |||||||  ||| ||| || | | |||||    
T  13031881 gttctggaagaacaaa-gagagcaatggaatcaacaaggatgaagcttgaagcgtctgaagaaaagtgctcctgaagtttagtgctcctggattaatgac 13031979  T
Q  150 gtcatcggaagcaagatcatcagaagcatctcattagaagca 191  Q
    |||||| |||||||| |||  |||| || ||||| |||||||    
T  13031980 gtcatcagaagcaagttcactagaaacacctcatcagaagca 13032021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 13692705 - 13692554
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||| ||||| |  || |||||||||| | |||| |||||| ||||| | |||||| |||  || ||| |||| |||||    
T  13692705 gttctggaagaacaaaagagagcaaaggaatcaggaaaaaggaagcttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatg 13692606  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    || ||||| |||||||| |||||||||||||||| | |||||||| ||||||    
T  13692605 acatcatcagaagcaagttcatcagaagcatctcttcagaagcaagatcacc 13692554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 192
Target Start/End: Original strand, 12366544 - 12366687
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaa-gtcaagttctcttgaaatgatga 148  Q
    |||||||||||| ||| |||||||||||||| ||||| ||||||||||||||| | | |||| ||||| | |||||  | |||| ||| |||| ||||||    
T  12366544 gttctggaagaaaaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctgaatttaaagtgctcctgaagtgatga 12366643  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaa 192  Q
    | ||||| ||| |||| |||||| ||||||||||| ||||||||    
T  12366644 catcatcagaatcaagttcatcaaaagcatctcatcagaagcaa 12366687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 13260424 - 13260569
Alignment:
Q  56 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 153  Q
    |||||||||| |||||  | ||||||||||  ||||||||||||||| | | |||| ||||| |  |||||||||  || ||| |||| |||||| ||||    
T  13260424 gaagaacaaaagagagataaggaattaacataaaggaagcttgaagcatttaaagagaagtgctcatgaagtcaaaagtgctcctgaagtgatgatgtca 13260523  T
Q  154 tcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    || |||||||| |||||| |||||||||||||||||||| ||||||    
T  13260524 tcagaagcaagttcatcataagcatctcattagaagcaagatcacc 13260569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 48800435 - 48800515
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 130  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | ||||||||||    
T  48800435 gttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaa 48800515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 2500385 - 2500261
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgt 151  Q
    |||||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||| |  |||| ||| |||| |||||||||    
T  2500385 tggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagacaaaagtgctcatgaagtgatgacgt 2500286  T
Q  152 catcggaagcaagatcatcagaagc 176  Q
    ||||  ||||||| |||||||||||    
T  2500285 catcataagcaagttcatcagaagc 2500261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 13649063 - 13648935
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatg 147  Q
    ||||| |||||||||| |||||||| ||||| ||||| ||||||| || | |||| |||||| ||||| | |||||| |||  || ||| |||| |||||    
T  13649063 gttctagaagaacaaaagagagcaaaggaatcaacaaaaaggaagtttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatg 13648964  T
Q  148 acgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||||||||||| |||||||    
T  13648963 acgtcatcagaagcaagatcaacagaagc 13648935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 2913415 - 2913542
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| ||||| | |||||| |  |||| ||| |||| | |||    
T  2913415 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatatgaagagaagtgctcctgaagacaaaagtgctcctgaagtaatg 2913514  T
Q  148 acgtcatcggaagcaagatcatcagaag 175  Q
    ||||||||  ||||||| ||||||||||    
T  2913515 acgtcatcaaaagcaagttcatcagaag 2913542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 4494837 - 4494725
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    ||||||||||||| || |||||||||| ||| ||||| ||||||||||||||| | | |||| ||||| | |||||||  ||| ||| |||| |||||||    
T  4494837 gttctggaagaacgaaagagagcaatgaaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctgaagtatagtgctcctgaagtgatgac 4494738  T
Q  150 gtcatcggaagca 162  Q
    |||||| ||||||    
T  4494737 gtcatcagaagca 4494725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 13018318 - 13018429
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||| ||||||||||| |||||||||||||| |||||| | ||||||| |||||| |||||||||||| | |||||||  ||| ||| |||| |||||||    
T  13018318 gttcgggaagaacaaa-gagagcaatggaatcaacaaggatgaagcttcaagcgtctgaagaaaagtgctcctgaagtttagtgctcctgaagtgatgac 13018416  T
Q  150 gtcatcggaagca 162  Q
    ||| || ||||||    
T  13018417 gtcttcagaagca 13018429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 113
Target Start/End: Original strand, 13890740 - 13890803
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaa 113  Q
    ||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| | ||||||||    
T  13890740 gttctgggagaacaaatgaaagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaa 13890803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 14426874 - 14426752
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  14426874 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtc 14426775  T
Q  153 atcggaagcaagatcatcagaag 175  Q
    ||| |||||||| ||||||||||    
T  14426774 atcagaagcaagttcatcagaag 14426752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 15088853 - 15088776
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||    
T  15088853 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 15088776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 16542835 - 16542955
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || |||||||| | |||| |||||||| || |||||||    
T  16542835 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagctt-aagcgtctgaagaaaactgcttctgaagacaaagtgctcttgaagtggtgacgtc 16542933  T
Q  153 atcggaagcaagatcatcagaa 174  Q
    ||| |||| ||| |||||||||    
T  16542934 atcagaagaaagttcatcagaa 16542955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 16622827 - 16622707
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || |||||||| | |||| |||||||| || |||||||    
T  16622827 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagctt-aagcgtctgaagaaaactgcttctgaagacaaagtgctcttgaagtggtgacgtc 16622729  T
Q  153 atcggaagcaagatcatcagaa 174  Q
    ||| |||| ||| |||||||||    
T  16622728 atcagaagaaagttcatcagaa 16622707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 29935172 - 29935283
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||||||||||||||| |||||| | ||||| ||||| |||||||||| || ||| | |||| ||||  |||||||||||||| ||| |||| ||||||     
T  29935172 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaatcgtctcaagagaagt-tttctgaagtcaagtgctcctgaagtgatgat 29935270  T
Q  150 gtcatcggaagca 162  Q
    |||||| ||||||    
T  29935271 gtcatcagaagca 29935283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 152
Target Start/End: Original strand, 13137718 - 13137821
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||  | ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| ||| |||| ||||||    
T  13137718 gttctggaagaacaaaagagaggtaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatga 13137817  T
Q  149 cgtc 152  Q
    ||||    
T  13137818 cgtc 13137821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 14193443 - 14193296
Alignment:
Q  50 gttctggaagaacaaatgagagc-aatg---gaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaat 143  Q
    |||||||||||||||| |||||| |||    |||| ||||| || |||||||||||||| |||||| ||| | | |||||| |||  || ||| |||| |    
T  14193443 gttctggaagaacaaaagagagctaattaaagaatcaacaaaaatgaagcttgaagcgtctgaagagaagcgctcctgaagacaaaagtgctcctgaagt 14193344  T
Q  144 gatgacgtcatcggaagcaagatcatcagaagcatctcattagaagca 191  Q
    |||||||||||| |||||||| |||||| |||||||| || |||||||    
T  14193343 gatgacgtcatcagaagcaagttcatcataagcatcttatcagaagca 14193296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 16316433 - 16316503
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||| ||| |||| |||||| |||||| |||||||| |||||||||||||||||| |||||||| ||||||    
T  16316433 aagtgctcctgaagtgatgatgtcatcagaagcaagttcatcagaagcatctcatcagaagcaagatcacc 16316503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 22577814 - 22577967
Alignment:
Q  50 gttctggaagaacaaatg-agagcaatggaattaacaagaaggaagcttgaagcgtgt--gaagaaaagtggttctgaagtcaa-gttctcttgaaatga 145  Q
    |||||||||||||||| | |||||||  |||| ||||| |||||||||||||| |     ||||| ||||| | ||||||| || || ||| |||| |||    
T  22577814 gttctggaagaacaaaaggagagcaaatgaatcaacaaaaaggaagcttgaagtgctccagaagagaagtgctcctgaagtaaaagtgctcctgaagtga 22577913  T
Q  146 tgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||||  |||||||| |||||||||||||||||| ||| |||| ||||||    
T  22577914 tgacgtcattagaagcaaggtcatcagaagcatctcatcagaggcaagatcacc 22577967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 13172191 - 13172239
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||||    
T  13172191 gttctggaagaacaaatgagagcaatagagttaacaaaaaggaagcttg 13172239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 33691520 - 33691646
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||  |||||||| ||||| ||||| ||||||| || |||||| |||||| || || | |||||| | |||| ||| |||| || |||    
T  33691520 gttctggaagaacaatagagagcaaaggaatcaacaaaaaggaagtttaaagcgtctgaagagaactgctcctgaagacaaagtgctcctgaagtggtga 33691619  T
Q  149 cgtcatcggaagcaagatcatcagaag 175  Q
    ||| ||| |||||||| |||| |||||    
T  33691620 cgttatcagaagcaagttcattagaag 33691646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 11793271 - 11793130
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||| ||||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||| | ||||| | |||||||  ||| ||| | || |||||||    
T  11793271 gttcaggaagaacaaaagagagcgaaggaatcaacaaaaaggaagcttgaagcatctgaaaagaagtgctcctgaagtttagtgctcctaaagtgatgac 11793172  T
Q  150 gtca-tcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||| |   ||||||| |||||| || |||||||| ||||||    
T  11793171 gtcattaaaaagcaagttcatcataaacatctcatcagaagc 11793130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 16307529 - 16307575
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||||||||||||||||||||||||||||||| |||  |||||||||||    
T  16307529 gttctggaagaacaaatgagagcaatggaatttaca--aaggaagcttg 16307575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 16316370 - 16316447
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||| ||||||||| |||||| | ||||| ||||| ||||||||||||||||| | |||| ||||| | |||||||    
T  16316370 gttctgaaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctaaagagaagtgctcctgaagt 16316447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 176
Target Start/End: Original strand, 30945189 - 30945310
Alignment:
Q  56 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcat 154  Q
    ||||||||||  |||||||  || | ||||| |||||||||| || ||| ||||||||| || | |||||| ||| || ||| |||| || |||||||||    
T  30945189 gaagaacaaaaaagagcaaatgagtcaacaaaaaggaagcttaaaacgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtcat 30945288  T
Q  155 cggaagcaagatcatcagaagc 176  Q
    | |||||||| |||||||||||    
T  30945289 cagaagcaagttcatcagaagc 30945310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 9709631 - 9709739
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||  ||||||||  |||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  9709631 tggaagaacaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtc 9709730  T
Q  153 atcggaagc 161  Q
    ||| |||||    
T  9709731 atcagaagc 9709739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 76 - 182
Target Start/End: Original strand, 5000675 - 5000782
Alignment:
Q  76 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaa 174  Q
    ||||| ||||| ||||||| ||||| | | |||||| ||||| | |||||||||| || ||| |||| ||| || |||||| ||||||||||  ||||||    
T  5000675 ggaatcaacaaaaaggaagtttgaaacatctgaagagaagtgatcctgaagtcaaagtgctcctgaagtgacgatgtcatcagaagcaagattgtcagaa 5000774  T
Q  175 gcatctca 182  Q
    ||||||||    
T  5000775 gcatctca 5000782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 21381287 - 21381374
Alignment:
Q  90 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||||| |||||||||||| | || ||||||| || ||  |||| ||||||||||||| ||||| || |||||||||||    
T  21381287 ggaagcttaaagcgtctgaagaaaagtgctcctaaagtcaaagtgcttctgaagtgatgacgtcatcagaagctagttcatcagaagc 21381374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 21695734 - 21695667
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    |||||||||||||||| |||||  | ||||| ||||| ||||||||||||| ||| |||||| |||||    
T  21695734 gttctggaagaacaaaagagagttaaggaatcaacaaaaaggaagcttgaatcgtttgaagagaagtg 21695667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 39284389 - 39284456
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagt 116  Q
    ||||||||||||||||| | |||  ||||||| ||||| |||||||||||||| || |||||||||||    
T  39284389 gttctggaagaacaaattaagagatatggaatcaacaaaaaggaagcttgaagtgtctgaagaaaagt 39284456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 13303131 - 13303061
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||||||  |||| ||| |||| ||||||||||||  |||||||  |||||||||||||||||| ||||||    
T  13303131 tctgaagagaagtgctcctgaagtgatgacgtcattagaagcaacttcatcagaagcatctcatcagaagc 13303061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 15468200 - 15468146
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcat 183  Q
    |||| |||||||| ||||||||||||| |||||||| |||||| | |||||||||    
T  15468200 aagtgctcttgaagtgatgacgtcatcagaagcaagttcatcatatgcatctcat 15468146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 41842100 - 41842178
Alignment:
Q  50 gttctggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||| |||||||||| |||||  ||||||| ||||| |||||||||||| || | |||||||||||| | |||||||    
T  41842100 gttctgaaagaacaaattgagagttatggaatcaacaaaaaggaagcttgatgcatctgaagaaaagtgctcctgaagt 41842178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 48062663 - 48062752
Alignment:
Q  90 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||||||| |||||| ||||||||| || | |||||||   |||| ||| |||| |||||||| |||| |||||||| ||||||||||||    
T  48062663 ggaagcttaaagcgtctgaagaaaattgctcctgaagtgtgaagtgctcctgaagtgatgacgccatcagaagcaagttcatcagaagca 48062752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 27872019 - 27871931
Alignment:
Q  90 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||||| ||||||||| || | |||||||   |||| ||| |||| | ||||||||||| |||||||| |||||||||||    
T  27872019 ggaagcttaaagcgtctgaagaaaactgctcctgaagtgtgaagtgctcctgaagtaatgacgtcatcagaagcaagttcatcagaagc 27871931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 16412383 - 16412327
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| ||||||||||||||||| ||||||||| |||  |||| ||||| |||||    
T  16412383 aagcataggttctggaagaacaaataagagcaatgtaatctacaaaaaggatgcttg 16412327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 24788403 - 24788347
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||||||| |||||||    
T  24788403 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagatcaccagaagc 24788347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 35952469 - 35952529
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| |||||||||    
T  35952469 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaa 35952529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 39284444 - 39284500
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| |||||||||||    
T  39284444 tctgaagaaaagtactcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 39284500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 111; Significance: 4e-56; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 5 - 199
Target Start/End: Original strand, 243952 - 244146
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || |||||||||||||||||||| || ||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |    
T  243952 tgtgcaggaccatagacaaaaatttagtgtctctttgaagcataggttctggaagaacaaattagagcaatggaatcaacaagaaggaagcttgaagcat 244051  T
Q  105 gtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
     |||||||||| |||||||||||||||| ||| |||| |||||||||||||  ||||||| |||||| ||| | ||||| |||||||||||||||    
T  244052 ctgaagaaaagaggttctgaagtcaagtgctcatgaagtgatgacgtcatcaaaagcaagttcatcaaaagtacctcatcagaagcaacatcacc 244146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 220605 - 220464
Alignment:
Q  50 gttctggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    |||||| |||||||||| |||||| ||||||| ||||| |||||| |||||||||| |||||||||||| | |||||||||||| ||| |||| | ||||    
T  220605 gttctgaaagaacaaattgagagctatggaatcaacaaaaaggaaccttgaagcgtctgaagaaaagtgctcctgaagtcaagtgctcctgaagtaatga 220506  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| |||||||| |||||||||||| ||||| ||||||    
T  220505 cgtcatcagaagcaagttcatcagaagcacctcatcagaagc 220464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 190
Target Start/End: Original strand, 377391 - 377443
Alignment:
Q  138 tgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  377391 tgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 377443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 18 - 199
Target Start/End: Complemental strand, 41044 - 40863
Alignment:
Q  18 agacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    ||||||||||| |||||||| ||||||| || ||||||||||||||||||||||||||||||| ||||| ||||||| ||||| | | ||||||||||||    
T  41044 agacaaaaattaagtgtctctttaaagcttaggttctggaagaacaaatgagagcaatggaatcaacaaaaaggaagtttgaaccatctgaagaaaagtg 40945  T
Q  118 gttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||| |||||  ||| |||| || ||| |||||| |||| |||||||||||||||| |||||||||||||||||||||    
T  40944 gttctgaactcaagggctcctgaagtggtgatgtcatcagaagtaagatcatcagaagcacctcattagaagcaacatcacc 40863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 198
Target Start/End: Original strand, 16199572 - 16199752
Alignment:
Q  18 agacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    ||||||||| |||||||||  |||||| ||| |||||||| |||||||||||||||||||||| |||||||| |||||||||||| | ||||||||||||    
T  16199572 agacaaaaaattagtgtctttttaaagtataggttctggaggaacaaatgagagcaatggaatcaacaagaaagaagcttgaagcatctgaagaaaagtg 16199671  T
Q  118 gttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
     | |||||||||||| ||| |||| ||||||||||||| |||||||| |||| ||||||| ||||| ||||||||||||||    
T  16199672 ctcctgaagtcaagtgctcctgaactgatgacgtcatcagaagcaagttcataagaagcacctcatcagaagcaacatcac 16199752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 20 - 162
Target Start/End: Original strand, 19249175 - 19249318
Alignment:
Q  20 acaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggt 119  Q
    |||||||||||||||||| || ||| ||| |||||||||||||||||||||||| |||||| |||||||| |||||||||||| | ||||||||||||||    
T  19249175 acaaaaatttagtgtctctttgaagtataggttctggaagaacaaatgagagcactggaatcaacaagaatgaagcttgaagcatctgaagaaaagtggt 19249274  T
Q  120 tctgaag-tcaagttctcttgaaatgatgacgtcatcggaagca 162  Q
    ||||||| |||| | ||| |||| ||||||||||||| ||||||    
T  19249275 tctgaagttcaaatgctcctgaagtgatgacgtcatcagaagca 19249318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 20725504 - 20725301
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || |||||||||||||||||||||||||||| || ||| || |||||||||||||||||||| ||| ||||||||||||||||||||| |    
T  20725504 tgtgcaggaccatagacaaaaatttagtgtctccttaaagcttaggttatgtaagaacaaatgagagcaatgaaatcaacaagaaggaagcttgaagcat 20725405  T
Q  105 gtgaagaaaagtggttctgaagtcaag---------ttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacat 195  Q
     |||||||||| |||||| ||||||||         | |||||||| |||||| |||||| |||||||| |||||| ||||| ||||| | ||| |||||    
T  20725404 ctgaagaaaagaggttctaaagtcaagtgcttctgatgctcttgaagtgatgatgtcatcagaagcaagttcatcataagcacctcatcaaaagaaacat 20725305  T
Q  196 cacc 199  Q
    ||||    
T  20725304 cacc 20725301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 188
Target Start/End: Complemental strand, 41495341 - 41495202
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| ||||| |||||||||| |||| ||| |||| ||||||    
T  41495341 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgcttctgaagtcaaagtgctcatgaagtgatga 41495242  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaa 188  Q
     |||||| |||||||| |||||||||||||||||| ||||    
T  41495241 tgtcatcagaagcaagttcatcagaagcatctcatcagaa 41495202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 15903566 - 15903425
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | || ||||| |||| ||  |||| ||||||    
T  15903566 gttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctccttaagtcaaagtgcttctgaagtgatga 15903467  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| |||||||| ||||||||| |||||||| ||||||    
T  15903466 cgtcatcagaagcaagttcatcagaaccatctcatcagaagc 15903425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 52920772 - 52920631
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||||| ||||| | ||||||| || || ||| |||| ||||||    
T  52920772 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtaaaagtgctcctgaagtgatga 52920673  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| |||||||| |||||||||||||||||| ||||||    
T  52920672 cgtcatcagaagcaagttcatcagaagcatctcatcagaagc 52920631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 13824401 - 13824256
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtg--tgaagaaaagtggttctgaagtcaa-gttctcttgaaatgat 146  Q
    |||||||||||||||| |||||||||||||| ||||| |||||||||||||| |    |||||| ||||| | ||||||| || || ||| |||| ||||    
T  13824401 gttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagtgctcctgaagagaagtgctcctgaagtaaaagtgctcctgaagtgat 13824302  T
Q  147 gacgtcatcggaagcaagatcatcagaagcatctcattagaagcaa 192  Q
    ||||||||| |||||||| |||||||||||||||||||||| ||||    
T  13824301 gacgtcatcagaagcaagttcatcagaagcatctcattagatgcaa 13824256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 14392798 - 14392947
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||| | ||||| ||||  ||||||||||||||| | |||||| ||||| | ||||||| || || ||| |||| ||||||    
T  14392798 gttctggaagaacaaaagagagctaaggaatcaacagaaaggaagcttgaagcatctgaagagaagtgctcctgaagttaaagtgctcctgaagtgatga 14392897  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
    ||||||| ||||||||||||||| ||||||||||| | |||||| |||||    
T  14392898 cgtcatcagaagcaagatcatcataagcatctcatcaaaagcaagatcac 14392947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 20646522 - 20646381
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 148  Q
    ||||| |||||||||| |||||||| ||||| ||||| | |||||||| |||||| |||||| ||||| | |||||||||| ||  || |||| ||||||    
T  20646522 gttctagaagaacaaaagagagcaaaggaatcaacaaaatggaagcttaaagcgtttgaagagaagtgctcctgaagtcaaagtgttcatgaagtgatga 20646423  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| |||||||| |||||||||||||||||| ||||||    
T  20646422 cgtcatcagaagcaagttcatcagaagcatctcatcagaagc 20646381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 22803893 - 22804033
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    ||||| |||||||||| |||||||||||||| ||||| ||||||||||||| | | |||||| ||||| | ||||||| |||| ||| | || |||||||    
T  22803893 gttctagaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaaacatttgaagagaagtgctcctgaagttaagtgctcctaaagtgatgac 22803992  T
Q  150 gtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||  ||||||| || ||||||||||||||| ||||||    
T  22803993 gtcatcaaaagcaagttcctcagaagcatctcatcagaagc 22804033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 6091099 - 6090957
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag-tcaagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||||| ||| ||||| || |||||||||||| | |||||| ||||| | |||||| | |||| ||| |||| | ||||    
T  6091099 gttctggaagaacaaaagagagcaatgaaatcaacaaaaatgaagcttgaagcatctgaagagaagtgctcctgaagttaaagtgctcatgaagttatga 6091000  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagca 191  Q
    ||||||| |||||||| |||||| ||||||||||| |||||||    
T  6090999 cgtcatcagaagcaagttcatcaaaagcatctcatcagaagca 6090957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 12962893 - 12963021
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||  | | ||||| ||||| ||||||||||||||||| |||||| ||||| |  ||||||| |||| |||||||| ||||||    
T  12962893 gttctggaagaacaaaagaggactaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctattgaagtcaaagtgctcttgaagtgatga 12962992  T
Q  149 cgtcatcggaagcaagatcatcagaagca 177  Q
    ||||||| |||||||| ||||||||||||    
T  12962993 cgtcatcagaagcaagttcatcagaagca 12963021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 37467669 - 37467541
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||| ||||||||| |||| ||||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||  ||| |||| ||||||    
T  37467669 gttctgaaagaacaaaagagaacaatggaatcaacaaaaaggaagcttgaagcatctgaagataagtgctcctgaagtcaaagagctcctgaagtgatga 37467570  T
Q  149 cgtcatcggaagcaagatcatcagaagca 177  Q
    ||||||| |||||||||||| ||||||||    
T  37467569 cgtcatcagaagcaagatcaccagaagca 37467541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 113
Target Start/End: Original strand, 12388636 - 12388731
Alignment:
Q  18 agacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaa 113  Q
    ||||||||||||||||||| |||||||| |  ||| ||| |||||| |||||||||||||||| ||||||||||||||||||||| | ||||||||    
T  12388636 agacaaaaatttagtgtctacttaaagcttgggttttgggagaacatatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaa 12388731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 17238753 - 17238871
Alignment:
Q  57 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcg 156  Q
    ||||||||| |||||| | ||||| ||||| |||||||||| |||||| |||||| ||||| | |||||||||||| ||  |||| |||||||||||||     
T  17238753 aagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtcaagtgcttctgaagtgatgacgtcatca 17238852  T
Q  157 gaagcaagatcatcagaag 175  Q
    |||||||||||| ||||||    
T  17238853 gaagcaagatcaccagaag 17238871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 13948703 - 13948562
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagtt-ctcttgaaatgatga 148  Q
    ||||||||| |||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| ||||| |  |||||||||  | ||| |||| ||||||    
T  13948703 gttctggaaaaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagtcaaaatgctcatgaagtgatga 13948604  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| |||||||| | |||||||||||||||| ||||||    
T  13948603 cgtcatcagaagcaagtttatcagaagcatctcatcagaagc 13948562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 51 - 190
Target Start/End: Complemental strand, 31303755 - 31303612
Alignment:
Q  51 ttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgac 149  Q
    ||||||||||||||| ||||||||  |||| ||||| |||||||||| |||| | |||||| ||||| | |||||||| |||| ||| |||| |||||||    
T  31303755 ttctggaagaacaaaagagagcaaaagaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatgac 31303656  T
Q  150 g---tcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |   ||||| |||||||| |||||||||||||||||| ||||||    
T  31303655 gtcatcatcagaagcaagttcatcagaagcatctcatcagaagc 31303612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 29951234 - 29951371
Alignment:
Q  53 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 152  Q
    ||||||||||||| |||||| | | | | ||||| ||||||||||||||| | || |||| |||| | |||||||||||| ||| |||| ||||||||||    
T  29951234 ctggaagaacaaaagagagctaagaagtcaacaaaaaggaagcttgaagcatctgtagaatagtgctactgaagtcaagtgctcctgaagtgatgacgtc 29951333  T
Q  153 atcggaagcaagatcatcagaagcatctcattagaagc 190  Q
     || |||||||| |||||||||||| || || ||||||    
T  29951334 ttcagaagcaagttcatcagaagcaccttatcagaagc 29951371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 30000388 - 30000525
Alignment:
Q  53 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 152  Q
    ||||||||||||| |||||| | | | | ||||| ||||||||||||||| | || |||| |||| | |||||||||||| ||| |||| ||||||||||    
T  30000388 ctggaagaacaaaagagagctaagaagtcaacaaaaaggaagcttgaagcatctgtagaatagtgctactgaagtcaagtgctcctgaagtgatgacgtc 30000487  T
Q  153 atcggaagcaagatcatcagaagcatctcattagaagc 190  Q
     || |||||||| |||||||||||| || || ||||||    
T  30000488 ttcagaagcaagttcatcagaagcaccttatcagaagc 30000525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 22 - 114
Target Start/End: Original strand, 26417456 - 26417547
Alignment:
Q  22 aaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||||||| |||||||| |    ||| |||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||    
T  26417456 aaaaatttagtgtctctttaaagcacagaaactg-aagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaa 26417547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 49642571 - 49642648
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||    
T  49642571 gttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 49642648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 8728818 - 8728866
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  8728818 gttctggaagaacaaatgagagcaatggaatttacaaaaaggaagcttg 8728866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 9080705 - 9080753
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||||    
T  9080705 gttctggaagaacaaatgagagcaatggaatttacaaaaaggaagcttg 9080753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 12968713 - 12968626
Alignment:
Q  43 agcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaag 131  Q
    |||||| ||||| |||||||||||||| | |||||||| |||||||||||||||||||| || ||||||||| | ||| ||||| ||||    
T  12968713 agcataggttctagaagaacaaatgagggtaatggaatcaacaagaaggaagcttgaag-gtctgaagaaaaatagttgtgaagacaag 12968626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 14073059 - 14073003
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| |||||||||||||||||||||||||||||||  |||| |||||||||||    
T  14073059 aagcatatgttctggaagaacaaatgagagcaatggaatctacaaaaaggaagcttg 14073003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 25398098 - 25398208
Alignment:
Q  82 aacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt--caagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatc 179  Q
    ||||| ||| ||||||||||| | |||||| ||| | | ||||||   ||||| ||| |||| ||| ||||||||| |||||||| ||||||||||||||    
T  25398098 aacaaaaagaaagcttgaagcatttgaagagaagcgctcctgaagatacaagtgctcctgaagtgacgacgtcatcagaagcaagttcatcagaagcatc 25398197  T
Q  180 tcattagaagc 190  Q
    |||||||||||    
T  25398198 tcattagaagc 25398208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 99
Target Start/End: Original strand, 4243002 - 4243047
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 99  Q
    |||||||||||||||||||||||||||| |||| ||||||||||||    
T  4243002 tggaagaacaaatgagagcaatggaatttacaaaaaggaagcttga 4243047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 16032847 - 16032770
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||| ||||||||||| ||||||| |||||| ||||| || |||||||||||| | |||||||||||| | |||||||    
T  16032847 gttccggaagaacaaaagagagcattggaatcaacaaaaatgaagcttgaagcatctgaagaaaagtgctcctgaagt 16032770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 12388735 - 12388799
Alignment:
Q  134 ctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
    ||| |||| ||||||||||||| |||||||| |||||| ||||| ||||| ||||||||||||||    
T  12388735 ctcctgaagtgatgacgtcatcagaagcaagttcatcataagcacctcatcagaagcaacatcac 12388799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 28582474 - 28582346
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 148  Q
    |||||||||||||||  ||||| || | ||| ||||| |||||||||| || ||| |||||| || || | |||||| ||| || ||| |||| || |||    
T  28582474 gttctggaagaacaatagagagtaaagaaatcaacaaaaaggaagcttaaaacgtctgaagagaactgctcctgaagacaaagtgctcctgaagtggtga 28582375  T
Q  149 cgtcatcggaagcaagatcatcagaagca 177  Q
    ||||||| |||||||| ||||||||||||    
T  28582374 cgtcatcagaagcaagttcatcagaagca 28582346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 47405247 - 47405356
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgt 151  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| |  |||| ||| |||| | |||||||    
T  47405247 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaaagtgctcctgaagtaatgacgt 47405346  T
Q  152 catcggaagc 161  Q
    |||| |||||    
T  47405347 catcagaagc 47405356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 20627275 - 20627348
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| |||| |||| || |||||||||    
T  20627275 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaacaaaactgcttctgaagt 20627348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 49553276 - 49553341
Alignment:
Q  46 ataagttctggaagaacaa-atgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaag 110  Q
    ||||||||||||||||||| | ||||||||  |||| ||||| ||||||||||||||||| |||||    
T  49553276 ataagttctggaagaacaacaggagagcaaatgaatcaacaaaaaggaagcttgaagcgtctgaag 49553341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 176
Target Start/End: Complemental strand, 2561514 - 2561414
Alignment:
Q  77 gaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaag 175  Q
    |||| ||||| |||||||||| |||||| |||||| || || | |||||| ||| || |||||||| || |||| ||||| |||||||| ||||||||||    
T  2561514 gaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagacaaagtgctcttgaagtggtgacatcatcagaagcaagttcatcagaag 2561415  T
Q  176 c 176  Q
    |    
T  2561414 c 2561414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 190
Target Start/End: Original strand, 49642648 - 49642695
Alignment:
Q  143 tgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||||  ||| |||||||| |||||||||||||||||||||||||    
T  49642648 tgatgacgcaatcagaagcaaggtcatcagaagcatctcattagaagc 49642695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 12397522 - 12397430
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaa--agcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||| |||| || ||||||||||||||||||  |||||  || ||| |||||| |||||||||| ||||||| ||| || ||||||||||||||||    
T  12397522 tgtgcaggaccatagacaaaaatttagtgtc--cttaagaagtataggttctg-aagaacaaattagagcaaaggactttacaagaaggaagcttg 12397430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 16305005 - 16305051
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||||||||||||||||||||||| |||| |||  |||||||||||    
T  16305005 gttctggaagaacaaatgagagcaatgtaatttaca--aaggaagcttg 16305051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 19197655 - 19197696
Alignment:
Q  45 cataagttctggaagaacaaatgagagcaatggaattaacaa 86  Q
    |||| ||||||||||||||||||||||||||| |||| ||||    
T  19197655 cataggttctggaagaacaaatgagagcaatgaaatttacaa 19197696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Complemental strand, 40800189 - 40800116
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||| ||  |||||||| | ||| ||||| |||||||||| |||||| |||||||||||| | |||||||    
T  40800189 tggaagaataatagagagcaaagaaatcaacaaaaaggaagcttaaagcgtctgaagaaaagtgctcctgaagt 40800116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 2785366 - 2785318
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  2785366 aagtgctcctgaagtgatgacgtcatctgaagcaaggtcatcagaagca 2785318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 10852133 - 10852077
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| |||||| ||||||||||||||||||| ||||  |||| ||| |||||||    
T  10852133 aagcataggttctgaaagaacaaatgagagcaattgaatctacaaaaagaaagcttg 10852077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 17697932 - 17697876
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| ||| |||||||||||||||||||||| ||||  |||| |||||| ||||    
T  17697932 aagcataggttatggaagaacaaatgagagcaattgaatctacaaaaaggaaccttg 17697876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 21636552 - 21636600
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  21636552 aagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 21636600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 47208073 - 47208013
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||  ||||||||  |||| ||||| |||||||||| |||||| |||||||||    
T  47208073 tggaagaacaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaa 47208013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 49666288 - 49666336
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  49666288 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 49666336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 50300581 - 50300521
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| |||||||||    
T  50300581 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaa 50300521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 2e-49; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 20 - 199
Target Start/End: Complemental strand, 6642072 - 6641893
Alignment:
Q  20 acaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggt 119  Q
    ||||||||||| |||||  |||||| ||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||| | |||||||| ||| |    
T  6642072 acaaaaatttaatgtctatttaaagtataggttctggaagaacaaatgagagcaatggagtcaacaagaaggaagcttgaagcatctgaagaaatgtgct 6641973  T
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||||||||||||| ||| |||| |||||||||||||  ||||||| |||||||||||| ||||| |||||||| ||||||    
T  6641972 tctgaagtcaagtgctcctgaagtgatgacgtcatcataagcaagttcatcagaagcacctcatcagaagcaatatcacc 6641893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 17540812 - 17540698
Alignment:
Q  18 agacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    |||||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| |    
T  17540812 agacaaaaatttagtgtctctttcaagcataggttctggaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagag 17540713  T
Q  118 gttctgaagtcaagt 132  Q
    ||||||||| |||||    
T  17540712 gttctgaagacaagt 17540698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 162
Target Start/End: Original strand, 41114474 - 41114615
Alignment:
Q  23 aaaatttagtgtctcctt--aaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggtt 120  Q
    ||||||||||||||| ||  ||||| || ||||| ||||||||||||||||||||||||| ||| ||||||||||||||||| | |||||||||| ||||    
T  41114474 aaaatttagtgtctctttttaaagcttaggttctcgaagaacaaatgagagcaatggaatcaacgagaaggaagcttgaagcatatgaagaaaagaggtt 41114573  T
Q  121 ctgaagtcaagttctcttgaaatgatgacgtcatcggaagca 162  Q
    |||||| ||||| |||||  |||| |||||||||| ||||||    
T  41114574 ctgaagacaagtgctcttagaatgctgacgtcatcagaagca 41114615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 11916114 - 11916006
Alignment:
Q  18 agacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    |||||||||||||||||||| |||||||||| |||||| ||||| |||||||||||||| ||| ||||||||||||||||||||| |  ||||||||| |    
T  11916114 agacaaaaatttagtgtctctttaaagcataggttctgaaagaaaaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatccgaagaaaagag 11916015  T
Q  118 gttctgaag 126  Q
    |||||||||    
T  11916014 gttctgaag 11916006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 197
Target Start/End: Original strand, 14604657 - 14604805
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||||||||| ||| |||||| ||||| | |||||||| |||| ||| |||| | ||||    
T  14604657 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaaacgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtaatga 14604756  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatca 197  Q
    ||||||| |||||||| |||||||||||||||||| |||||||| ||||    
T  14604757 cgtcatcagaagcaagttcatcagaagcatctcatcagaagcaagatca 14604805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 17787760 - 17787868
Alignment:
Q  22 aaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttc 121  Q
    |||||||||||||||| |||||||| | |||||| |||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| |||||    
T  17787760 aaaaatttagtgtctctttaaagcacatgttctg-aagaacaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatctgaagaaaagaggttc 17787858  T
Q  122 tgaagtcaag 131  Q
    | ||| ||||    
T  17787859 taaagacaag 17787868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 16632800 - 16632651
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    ||||||||| |||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | || ||||| |||| ||  |||| ||||||    
T  16632800 gttctggaaaaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctaaagtcaaagtgcttctgaagtgatga 16632701  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
    |  |||| |||||||| |||||| ||||||||||| |||||||| |||||    
T  16632700 caccatcagaagcaaggtcatcaaaagcatctcatcagaagcaagatcac 16632651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 37435271 - 37435399
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaaatgatga 148  Q
    |||||||||||||||| ||||||||  |||| ||||| ||||||||||||||| | |||||| ||||| | ||||||| | ||| ||| |||| ||||||    
T  37435271 gttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtaatagtgctcctgaagtgatga 37435370  T
Q  149 cgtcatcggaagcaagatcatcagaagca 177  Q
    ||||||| |||||||| ||||||||||||    
T  37435371 cgtcatcagaagcaaggtcatcagaagca 37435399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 56034920 - 56034792
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt-caagttctcttgaaatgatga 148  Q
    |||||||||||||||| ||||||||  |||| ||||| ||| ||||||||||||| |||||||||||| | |||||||  |||| ||  |||| ||||||    
T  56034920 gttctggaagaacaaaagagagcaaatgaatcaacaaaaagaaagcttgaagcgtctgaagaaaagtgatcctgaagtaaaagtgcttctgaagtgatga 56034821  T
Q  149 cgtcatcggaagcaagatcatcagaagca 177  Q
    ||| ||| |||||||| ||||||||||||    
T  56034820 cgtaatcagaagcaagttcatcagaagca 56034792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 15139590 - 15139449
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||||||||||||||| | |||| ||||||| ||||| |||||||||| ||||   |||||||||||| | || ||||||||| |||| ||| ||||||    
T  15139590 gttctggaagaacaaattaagagctatggaatcaacaaaaaggaagctttaagcaattgaagaaaagtgctccttaagtcaagtgctctagaagtgatga 15139491  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
     ||| ||||||||||| |||| ||||||| ||| | ||||||    
T  15139490 tgtcttcggaagcaagttcattagaagcacctcgtcagaagc 15139449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 45833753 - 45833615
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgt 151  Q
    |||||||||||| ||||||||  |||| ||||| ||||||||||||||| | |||| | ||| | | |||||| |||  || |||||||| |||||||||    
T  45833753 tggaagaacaaaagagagcaaacgaatcaacaaaaaggaagcttgaagcatctgaaaagaagcgctcctgaagacaaaagtgctcttgaagtgatgacgt 45833654  T
Q  152 catcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||| |||||||| | |||| ||||||||||| ||||||    
T  45833653 catcagaagcaagtttatcataagcatctcatcagaagc 45833615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 11901585 - 11901528
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 99  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  11901585 aagcataggttctggaagaacaaatgagaacaatggaattaacaaaaaggaagcttga 11901528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 29680308 - 29680421
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    ||||| |||||||||| |||||||| ||||| ||||| ||||||||||||||  | |||||| ||||| | |||||||| |||| ||| |||| ||||||    
T  29680308 gttctagaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagtatctgaagagaagtgttcctgaagtcaaagtgctcctgaagtgatga 29680407  T
Q  149 cgtcatcggaagca 162  Q
    ||||||| ||||||    
T  29680408 cgtcatcagaagca 29680421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 9141220 - 9141095
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgt 151  Q
    |||||||||||| |||||||| ||||| ||||| |||||||||| | |||| |||||| ||||| | |||||| |  |||| ||| |||| |||||||||    
T  9141220 tggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgt 9141121  T
Q  152 catcggaagcaagatcatcagaagca 177  Q
    |||| || ||||| || |||||||||    
T  9141120 catcagatgcaagttcttcagaagca 9141095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 19620842 - 19620955
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| | ||| | |||||||| ||||  || |||| ||||||    
T  19620842 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagacgtgctcctgaagtcaaagtgatcctgaagtgatga 19620941  T
Q  149 cgtcatcggaagca 162  Q
    ||||||| ||||||    
T  19620942 cgtcatcagaagca 19620955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 3395987 - 3395907
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 130  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| || || | ||||||||||    
T  3395987 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagtcaa 3395907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 12601462 - 12601312
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||||| | || | |||||| ||||| | || ||| |  |||| ||| |||| |||||    
T  12601462 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaggcatctgaagagaagtgttccttaagacaaaagtgctcctgaagtgatg 12601363  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
    | ||||||  |||||   |||| ||||||||||||| |||||||| |||||    
T  12601362 atgtcatcaaaagcattttcataagaagcatctcatcagaagcaagatcac 12601312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 12810944 - 12811021
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||| ||| | |||  | ||||| |||||||||    
T  12810944 gttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgtagcatctgagcagaagtgcttctgaagt 12811021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 126
Target Start/End: Complemental strand, 10073280 - 10073208
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag 126  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| |||||||||||| | ||||||    
T  10073280 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaagtgctcctgaag 10073208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 19885048 - 19884922
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaag--aaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaa-tgatgac 149  Q
    |||||||| ||  |||||||||||||| |||||   |||||||||| |||||| ||||||||| || | |||||| ||| || ||||||||| ||  |||    
T  19885048 tggaagaataatagagagcaatggaatcaacaaaccaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcttgaaagtggcgac 19884949  T
Q  150 gtcatcggaagcaagatcatcagaagc 176  Q
    |||||| |||||||| |||||||||||    
T  19884948 gtcatcagaagcaagttcatcagaagc 19884922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 40846390 - 40846320
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||||||  |||| ||| |||| ||||||||||||| ||| |||| |||||||||||||||||| ||||||    
T  40846390 tctgaagaaaagtgctcctgaagtgatgacgtcatcagaaacaagttcatcagaagcatctcatcagaagc 40846320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 40846445 - 40846367
Alignment:
Q  50 gttctggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||| |||||||||| |||||  ||||||| ||||| ||||||||||||||| | |||||||||||| | |||||||    
T  40846445 gttctgaaagaacaaattgagagttatggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagt 40846367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 10250183 - 10250134
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 99  Q
    ||||| |||||||||||||||||||||||||| | || ||||||||||||    
T  10250183 gttctagaagaacaaatgagagcaatggaatttaaaaaaaggaagcttga 10250134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 55380604 - 55380527
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||| || |||||| |||||| | ||||| ||||| ||||||||||||||||| |||||| ||||| | |||||||    
T  55380604 gttctgaaaaaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagt 55380527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 13575898 - 13576006
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||  ||||||||  |||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  13575898 tggaagaacaatagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtc 13575997  T
Q  153 atcggaagc 161  Q
    ||| |||||    
T  13575998 atcagaagc 13576006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 161
Target Start/End: Complemental strand, 54680255 - 54680147
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  54680255 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaattgctcctgaagacaaagtgctcctgaagtggtgacgtc 54680156  T
Q  153 atcggaagc 161  Q
    ||| |||||    
T  54680155 atcagaagc 54680147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 55380550 - 55380494
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||  |||| ||| |||| ||||||||||||| ||||||||||||||||||||    
T  55380550 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagatcatcagaagc 55380494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 176
Target Start/End: Original strand, 17398529 - 17398576
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||| |||||||| ||||||||||||| |||||||| |||||||||||    
T  17398529 aagtgctcttgaagtgatgacgtcatcagaagcaagttcatcagaagc 17398576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 176
Target Start/End: Complemental strand, 6517746 - 6517704
Alignment:
Q  134 ctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| ||||||||||||| |||||||| |||||||||||    
T  6517746 ctcttgaagtgatgacgtcatcagaagcaagttcatcagaagc 6517704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 12417357 - 12417414
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 99  Q
    ||||||| ||||||||||||||||| |||| ||||| ||| |||| | ||||||||||    
T  12417357 aagcataggttctggaagaacaaattagaggaatggtatttacaaaatggaagcttga 12417414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 14904069 - 14904130
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 111  Q
    |||||||||||||||| ||||||||  |||| ||||| || ||||||| |||||| ||||||    
T  14904069 gttctggaagaacaaaagagagcaaatgaataaacaaaaaagaagcttaaagcgtctgaaga 14904130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 29121732 - 29121608
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaagg-aagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgt 151  Q
    |||||||||||   ||||||| ||||| ||||| |||| |||||| || ||| ||||||||| ||   |||||| ||| || |||||||| ||||| |||    
T  29121732 tggaagaacaataaagagcaaaggaatcaacaaaaagggaagcttaaaacgtctgaagaaaactgcacctgaagacaaagtgctcttgaagtgatggcgt 29121633  T
Q  152 catcggaagcaagatcatcagaagc 176  Q
    |||| | |||||| |||||||||||    
T  29121632 catcagtagcaagttcatcagaagc 29121608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 10640186 - 10640351
Alignment:
Q  18 agacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    |||||||||||||||||||| || ||| |||  || ||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| |    
T  10640186 agacaaaaatttagtgtctctttgaagtatagattttggaagaacaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatatgaagaaaagag 10640285  T
Q  118 gttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcat 183  Q
    ||||||||||||||| ||| |||| ||||||||||||| |||||||| |||||||||||| |||||    
T  10640286 gttctgaagtcaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcacctcat 10640351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 191
Target Start/End: Complemental strand, 13435900 - 13435758
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt-caagttctcttgaaatgatga 148  Q
    |||||| ||||||||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | || ||||  |||| ||| |||| ||||||    
T  13435900 gttctgaaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctaaagtaaaagtgctcctgaagtgatga 13435801  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagca 191  Q
    ||||||| |||||||| |||||| ||||||||||| |||||||    
T  13435800 cgtcatcagaagcaagttcatcaaaagcatctcatcagaagca 13435758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 191
Target Start/End: Complemental strand, 23284930 - 23284790
Alignment:
Q  51 ttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacg 150  Q
    ||||||||||||||| |||| | ||||||| ||||| ||||||||||||| | | |||||| ||||| | |||||||||||| ||  |||| |||||| |    
T  23284930 ttctggaagaacaaaagagaactatggaatcaacaaaaaggaagcttgaaacatctgaagagaagtgctcctgaagtcaagtgcttctgaagtgatgatg 23284831  T
Q  151 tcatcggaagcaagatcatcagaagcatctcattagaagca 191  Q
    ||||| |||||||| |||| ||||||||||||| |||||||    
T  23284830 tcatcagaagcaagttcattagaagcatctcatcagaagca 23284790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 54 - 199
Target Start/End: Complemental strand, 24117192 - 24117045
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||| |||||| | ||||| ||||| |||||||||| |||| | |||||| ||||| | |||||||| |||| ||| |||| ||||||||||    
T  24117192 tggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatgacgtc 24117093  T
Q  153 atcggaagcaagatcatcagaagcatctc-attagaagcaacatcacc 199  Q
    ||| ||| |||| ||||||||||||||||  |||||||||| ||||||    
T  24117092 atcagaaacaagttcatcagaagcatctcggttagaagcaagatcacc 24117045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 3680835 - 3680739
Alignment:
Q  59 gaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 155  Q
    ||||||| |||||||| | |||  ||||||||||||||| |||| | ||||||||||||||||||||||||||| ||  |||| |||||||||||||    
T  3680835 gaacaaaagagagcaaagaaatctacaagaaggaagcttaaagcatctgaagaaaagtggttctgaagtcaagtgctgctgaagtgatgacgtcatc 3680739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 9718211 - 9718071
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 148  Q
    ||||| |||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| || |  | |||||| ||| || |||||||| ||||||    
T  9718211 gttctagaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactactcctgaagacaaagtgctcttgaagtgatga 9718112  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaag 189  Q
    ||||||| |||||||| | |||| ||||||| ||| |||||    
T  9718111 cgtcatcagaagcaagtttatcataagcatcccatcagaag 9718071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 198
Target Start/End: Complemental strand, 26943958 - 26943781
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || ||||||||||| |||||||| || ||| ||| |||||  ||||||||||||||||||||| || ||||||||||  ||||||||| |    
T  26943958 tgtgcaggaccaaagacaaaaattgagtgtctctttgaagtatatgttctaaaagaacaaatgagagcaatgggatcaacaagaaggttgcttgaagcat 26943859  T
Q  105 gtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
     ||||| ||||||                ||| |||| ||||||||||||| |||||||| || ||||||||| ||||||||||||||||||||    
T  26943858 ctgaaggaaagtg----------------ctcctgaagtgatgacgtcatcagaagcaagttcgtcagaagcacctcattagaagcaacatcac 26943781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 112 - 198
Target Start/End: Complemental strand, 19470972 - 19470886
Alignment:
Q  112 aaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
    |||||| | |||||||||||| ||| | || ||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||    
T  19470972 aaagtgctcctgaagtcaagtgctcctaaagtgatgacgtcatcagaagcaagttcatcagaagcacctcatcagaagcaacatcac 19470886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 20112495 - 20112621
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||||||||||||||  ||| || ||||||| ||||| ||||||||||||||| | | |||| ||||| | || |||||||||  || |||| |||||||    
T  20112495 gttctggaagaacaagagagggctatggaatcaacaaaaaggaagcttgaagcatctaaagagaagtgctcctaaagtcaagtgttcatgaagtgatgac 20112594  T
Q  150 gtcatcggaagcaagatcatcagaagc 176  Q
    |||||| |||||||| || ||||||||    
T  20112595 gtcatcagaagcaagttcttcagaagc 20112621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 98
Target Start/End: Complemental strand, 25592896 - 25592838
Alignment:
Q  40 taaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||    
T  25592896 taaagcataagttctggaagaacaaatgagagcaatggaatctacaaaaaggaagcttg 25592838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 162
Target Start/End: Complemental strand, 19624330 - 19624217
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| ||| | || ||||||    
T  19624330 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcctaaagtgatga 19624231  T
Q  149 cgtcatcggaagca 162  Q
    ||||||| ||||||    
T  19624230 cgtcatcagaagca 19624217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 14100254 - 14100366
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||||||| | || ||| ||||  | |||||||  ||| ||  |||| |||||||    
T  14100254 gttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctggagagaagtactcctgaagtatagtgcttctgaagtgatgac 14100353  T
Q  150 gtcatcggaagca 162  Q
    |||||| ||||||    
T  14100354 gtcatcagaagca 14100366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 19086518 - 19086438
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 130  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||||||||||||| |||||| ||||| | ||||||||||    
T  19086518 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtcaa 19086438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 101
Target Start/End: Complemental strand, 19473194 - 19473115
Alignment:
Q  22 aaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaag 101  Q
    ||||||||||||||| |||||||| || ||||| | |||||||||| ||||||| |||| || |||||||||||||||||    
T  19473194 aaaaatttagtgtctacttaaagcttaggttctaggagaacaaatgggagcaatagaatcaataagaaggaagcttgaag 19473115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 34451465 - 34451592
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||| ||||| | ||| ||||||||||||||| | |||||| ||| | | |||||| |  |||| ||  |||| |||||    
T  34451465 gttctggaagaacaaaagagagcaaaggaatcagcaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgcttctgaagtgatg 34451564  T
Q  148 acgtcatcggaagcaagatcatcagaag 175  Q
    |||||||| |||||||| |||| |||||    
T  34451565 acgtcatcagaagcaagttcattagaag 34451592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 19876162 - 19876107
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagctt 97  Q
    ||||||| |||||||||||||||||||||| |||||| || |||||||||||||||    
T  19876162 aagcatatgttctggaagaacaaatgagagaaatggattttacaagaaggaagctt 19876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 23298324 - 23298259
Alignment:
Q  33 gtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 99  Q
    ||||| |||||||||| |||||| ||||||||||||||||||||||||  |||| ||||||||||||    
T  23298324 gtctctttaaagcataggttctg-aagaacaaatgagagcaatggaatctacaaaaaggaagcttga 23298259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 26971991 - 26972071
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 130  Q
    |||||||||||||||  |||||||| ||||| ||||| |||||| ||| |||||| |||||| || || ||||||||||||    
T  26971991 gttctggaagaacaatggagagcaaaggaatcaacaaaaaggaatcttaaagcgtctgaagagaactgcttctgaagtcaa 26972071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 177
Target Start/End: Original strand, 12715219 - 12715344
Alignment:
Q  53 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 150  Q
    ||||||||||||| |||||||| | ||| ||||| ||||||||||||||| | |||||| ||||| | |||||| |  ||||  ||  ||| ||||||||    
T  12715219 ctggaagaacaaaagagagcaaagaaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagacaaaagtgttc-cgaagtgatgacg 12715317  T
Q  151 tcatcggaagcaagatcatcagaagca 177  Q
    ||||| |||| ||| ||||||||||||    
T  12715318 tcatcagaaggaagttcatcagaagca 12715344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 16462429 - 16462480
Alignment:
Q  45 cataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagct 96  Q
    |||| |||||||||||||||||||||| ||||||||| |||| |||||||||    
T  16462429 cataggttctggaagaacaaatgagaggaatggaatttacaaaaaggaagct 16462480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 21235461 - 21235338
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||  |||||||| |||||  |||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| |   ||||||    
T  21235461 tggaagaacaatagagagcaaaggaatctacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtagcgacgtc 21235362  T
Q  153 atcggaagcaagatcatcagaagc 176  Q
    ||| |||||||| |||||||||||    
T  21235361 atcagaagcaagttcatcagaagc 21235338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 21625466 - 21625325
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatg 147  Q
    ||||| |||||||||| ||||| ||  |||| |||||  |||||||||||||| | |||||| ||| | |||||||| |  |||| ||| |||| |||||    
T  21625466 gttctcgaagaacaaaagagagaaaatgaatcaacaaataggaagcttgaagcatctgaagagaagcgcttctgaagacaaaagtgctcctgaagtgatg 21625367  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||| |||| || ||||| |||||| ||||||||||| ||||||    
T  21625366 acg-catcagaggcaagttcatcataagcatctcatcagaagc 21625325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 25597776 - 25597713
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcat 183  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||||    
T  25597776 tctgaagagaagtgctcctgaagtgatgacgtcatctgaagcaagttcatcagaagcatctcat 25597713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 33351766 - 33351853
Alignment:
Q  90 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||||| ||||||||| || | |||||| ||| || |||||||| |||||| |||||| |||||||| |||||||||||    
T  33351766 ggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcttgaagtgatgatgtcatcagaagcaagttcatcagaagc 33351853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 13602460 - 13602406
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcat 183  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||||||||    
T  13602460 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcat 13602406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 13602523 - 13602446
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| ||||| || ||||| ||||| |||||||||| || ||| |||||| ||||| | |||||||    
T  13602523 gttctggaagaacaaaagagagaaaaggaatcaacaaaaaggaagcttaaaccgtttgaagagaagtgctcctgaagt 13602446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 17445477 - 17445534
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaa-ttaacaagaaggaagcttg 98  Q
    ||||||| |||||||||||||||||||||||||| ||| || |||| |||||||||||    
T  17445477 aagcatatgttctggaagaacaaatgagagcaatagaattttacaaaaaggaagcttg 17445534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 19689084 - 19689023
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 111  Q
    |||||||||||||||| ||||||||  |||| ||||| ||||||| ||||||||| ||||||    
T  19689084 gttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagtttgaagcgtctgaaga 19689023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 32336145 - 32336091
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| |||||||||||| ||||||||||||||||||| |||  |||||||||||    
T  32336145 aagcataggttctggaagaaaaaatgagagcaatggaatttaca--aaggaagcttg 32336091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 7812370 - 7812314
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| ||||||||||||||||||| |||||| ||||  |||| |||||||||||    
T  7812370 aagcataggttctggaagaacaaatgaaagcaattgaatctacaaaaaggaagcttg 7812314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 22 - 98
Target Start/End: Complemental strand, 17928192 - 17928117
Alignment:
Q  22 aaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||||||||||||||    |||||||| |||||| ||||||||||||||||||| || | ||||| |||||||||||    
T  17928192 aaaaatttagtgtctttaaaaagcataggttctg-aagaacaaatgagagcaatagattcaacaaaaaggaagcttg 17928117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 18171814 - 18171862
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||||||||||||| |||||||||||||| |||| ||| |||||||    
T  18171814 gttctggaagaacaaataagagcaatggaatttacaaaaagcaagcttg 18171862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 24718549 - 24718597
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||||||||||||||||||||||  |||| |||| |||||||||||    
T  24718549 gttctggaagaacaaatgagagcaataaaatttacaaaaaggaagcttg 24718597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 15302539 - 15302418
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa---gttctcttgaaatgat 146  Q
    ||||| |||||| ||| |||||||| ||||| ||||| | |||| ||| | |||| |||||| ||||| | |||||| |||   || ||| |||| ||||    
T  15302539 gttctagaagaaaaaaagagagcaaaggaatcaacaaaatggaaacttaaggcgtctgaagagaagtgctcctgaagacaaaaagtgctcctgaagtgat 15302440  T
Q  147 gacgtcatcggaagcaagatca 168  Q
    ||||||||| ||||||||||||    
T  15302439 gacgtcatcagaagcaagatca 15302418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 15987562 - 15987495
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    |||||| || |||||| |||||| | ||||| ||||| ||||||||||||||| | ||||||||||||    
T  15987562 gttctgaaaaaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtg 15987495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 20730505 - 20730628
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||  |||||||| | ||| ||||| |||||||||| |||||| ||||||||| || |  ||||| | |||| ||| |||| |  |||||||    
T  20730505 tggaagaacaatagagagcaaagaaatcaacaaaaaggaagctttaagcgtctgaagaaaactgctcatgaagacaaagtgctcctgaagtagtgacgtc 20730604  T
Q  153 atcggaagcaagatcatcagaagc 176  Q
    ||| |||||||| |||||| ||||    
T  20730605 atcagaagcaagttcatcataagc 20730628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Original strand, 23005838 - 23005884
Alignment:
Q  52 tctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||||||||||| ||||||||||||||||| |||| ||| |||||||    
T  23005838 tctggaagaacacatgagagcaatggaatttacaaaaagaaagcttg 23005884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 23782528 - 23782482
Alignment:
Q  52 tctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||||||||||| ||||||||||||||||| |||| ||| |||||||    
T  23782528 tctggaagaacacatgagagcaatggaatttacaaaaagaaagcttg 23782482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 12348491 - 12348434
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 99  Q
    ||||||| ||||| ||||||||||||||||||||| |||  | || ||||||||||||    
T  12348491 aagcataggttctcgaagaacaaatgagagcaatgaaatctagaaaaaggaagcttga 12348434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 25597830 - 25597753
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    ||||| |||||| ||| |||||||||||||| ||||| |||||||||  |||| | |||||| ||||| | |||||||    
T  25597830 gttctagaagaataaaagagagcaatggaatcaacaaaaaggaagctaaaagcatctgaagagaagtgctcctgaagt 25597753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 111
Target Start/End: Complemental strand, 32544632 - 32544575
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 111  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| ||||||    
T  32544632 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaaga 32544575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 176
Target Start/End: Original strand, 16264954 - 16265074
Alignment:
Q  57 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatc 155  Q
    ||||||||  |||||||| ||||| ||||| |||||| | | |||| | ||||||||| || | |||||| ||| || ||| |||| ||  |||||||||    
T  16264954 aagaacaatagagagcaaaggaatcaacaaaaaggaatcctaaagcatctgaagaaaactgctcctgaagacaaagtgctcctgaagtggcgacgtcatc 16265053  T
Q  156 ggaagcaagatcatcagaagc 176  Q
     |||||||| |||||||||||    
T  16265054 agaagcaagttcatcagaagc 16265074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 24728352 - 24728396
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||||||||||||||||||  |||| |||| |||||||||||    
T  24728352 tggaagaacaaatgagagcaataaaatttacaaaaaggaagcttg 24728396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 177
Target Start/End: Complemental strand, 29918367 - 29918240
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaag--aaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaa-tgatgac 149  Q
    |||||||| ||  |||||||| ||||| |||||   |||||||||| |||||| ||||||||| || |||||||| ||| || ||| ||||| || ||||    
T  29918367 tggaagaataatagagagcaaaggaatcaacaaatcaaggaagcttaaagcgtatgaagaaaactgcttctgaagacaaagtgctcctgaaagtggtgac 29918268  T
Q  150 gtcatcggaagcaagatcatcagaagca 177  Q
    |||||  ||||||||  |||||||||||    
T  29918267 gtcattagaagcaagtccatcagaagca 29918240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 5 - 177
Target Start/End: Complemental strand, 6402 - 6230
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || |||||||||||||||||||  |||||| ||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |    
T  6402 tgtgcaggaccatagacaaaaatttagtgtctatttaaagtataggttctagaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagcat 6303  T
Q  105 gtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
     |||||||||||| | ||||||||||||  || |||| ||||||||||||| |||||||| ||||||||||||    
T  6302 ctgaagaaaagtgctcctgaagtcaagtgttcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 6230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 21191564 - 21191741
Alignment:
Q  20 acaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggt 119  Q
    |||||||||||||||||  |||||| | | |||||||||||||||| ||||||| |||||| ||||||||||||||||||||| | |||||||||||| |    
T  21191564 acaaaaatttagtgtctatttaaagta-aggttctggaagaacaaacgagagcattggaatcaacaagaaggaagcttgaagcatctgaagaaaagtgct 21191662  T
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
     |||||||||||| ||| |||| ||||||||||||| |||||||| ||||| |||||||||||| |||| ||| |||||    
T  21191663 cctgaagtcaagtcctcctgaagtgatgacgtcatcagaagcaagttcatctgaagcatctcatcagaaacaatatcac 21191741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 18896256 - 18896383
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || |||||||||||| ||||||| ||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||| |    
T  18896256 tgtgcaggaccatagacaaaaattttgtgtctctttaaatcataggttctggaagaacaaatgagagcaatggaatcaacaagaaggaagcatgaagcat 18896355  T
Q  105 gtgaagaaaagtggttctgaagtcaagt 132  Q
     |||||||||| |||||||||| |||||    
T  18896356 ctgaagaaaagaggttctgaagacaagt 18896383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 177
Target Start/End: Original strand, 17024678 - 17024822
Alignment:
Q  33 gtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagt 132  Q
    ||||| || ||| ||| ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| | |||||||||| |||||| |||| ||||    
T  17024678 gtctctttgaagtataggttctggaagaacaaatgagatcaatggaatcaacaagaaggaagcttgaagcatctgaagaaaagaggttctaaagttaagt 17024777  T
Q  133 tctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
     ||  |||| |||| |||||||| |||||||| ||||||||||||    
T  17024778 gcttctgaagtgataacgtcatcagaagcaagttcatcagaagca 17024822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 12613508 - 12613658
Alignment:
Q  50 gttctggaagaacaaa-tgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    |||||||||||| ||| | ||||| ||||||| ||||| ||||||||||||||| | ||||||| |||| |||||||||||||| ||| |||| ||||||    
T  12613508 gttctggaagaaaaaactaagagctatggaatcaacaaaaaggaagcttgaagcatctgaagaatagtgattctgaagtcaagtgctcctgaagtgatga 12613607  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||||||| |||||||| |||| |||| || ||||| |||||||||||||||    
T  12613608 cgtcatcagaagcaagttcattagaaccacctcatcagaagcaacatcacc 12613658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 174
Target Start/End: Original strand, 26701856 - 26701981
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||||||||||||||| | |||| ||||||| ||||  | ||||||||||||||| |||||||||||| | |||||||||||| ||| |||| ||||||    
T  26701856 gttctggaagaacaaattaagagctatggaatcaacataagggaagcttgaagcgtatgaagaaaagtgctcctgaagtcaagtgctcatgaagtgatga 26701955  T
Q  149 cgtcatcggaagcaagatcatcagaa 174  Q
    | ||||| |||||||| |||||||||    
T  26701956 catcatcagaagcaagttcatcagaa 26701981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 16235024 - 16235152
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag--tcaagttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||||||||| ||||| ||||||||||||||| | |||| | ||||| | ||||||   ||||| ||| |||| |||||    
T  16235024 gttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaaaagaagtgctcctgaagacacaagtgctcctgaagtgatg 16235123  T
Q  148 acgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||| ||| |||||||||||    
T  16235124 acgtcatcagaagtaagttcatcagaagc 16235152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 194
Target Start/End: Complemental strand, 2268895 - 2268749
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatg 147  Q
    |||||||||||||||| ||||||||  |||| | ||| ||||||| ||| ||| | |||||| ||| | | |||||| |||  || ||| |||| |||||    
T  2268895 gttctggaagaacaaaagagagcaaatgaatcatcaaaaaggaagtttgtagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagtgatg 2268796  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaaca 194  Q
    |||||||| |||||||| |||||||||||||||||| ||||||||||    
T  2268795 acgtcatcagaagcaagttcatcagaagcatctcatcagaagcaaca 2268749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 190
Target Start/End: Original strand, 22599898 - 22600036
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgt 151  Q
    |||||||||||| ||||||||  |||| ||||| ||||||||||||||| | |||||| ||| | | |||||| |  |||| ||| |||| ||||||| |    
T  22599898 tggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcatctgaagagaagcgctcctgaagacaaaagtgctcctgaagtgatgacat 22599997  T
Q  152 catcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||| |||||||| | |||||||||||||||| ||||||    
T  22599998 catcagaagcaagtttatcagaagcatctcatcagaagc 22600036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 10757771 - 10757645
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||||| ||||||||| |||||| | ||||| ||||| ||||||||||||||||| |||||| ||||| |  ||||||  ||| ||| | || |||||||    
T  10757771 gttctgaaagaacaaaagagagctaaggaatcaacaa-aaggaagcttgaagcgtttgaagagaagtgctcttgaagtttagtgctcctaaagtgatgac 10757673  T
Q  150 gtcatcggaagcaagatcatcagaagca 177  Q
    |||||| | |||||| ||||||||||||    
T  10757672 gtcatcaggagcaagttcatcagaagca 10757645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 176
Target Start/End: Complemental strand, 21029113 - 21029019
Alignment:
Q  82 aacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    ||||| |||||||||| |||| | |||||||||||| | || ||||||||| ||| |||| |||||||||||||  ||||||| |||||||||||    
T  21029113 aacaaaaaggaagcttaaagcatatgaagaaaagtgctcctcaagtcaagtgctcctgaagtgatgacgtcatcaaaagcaagttcatcagaagc 21029019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 33256071 - 33256216
Alignment:
Q  56 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 153  Q
    |||||||| | |||||||| ||||| ||||| || ||||||| | |||| |||||| ||||| |  ||||| |||  || ||| |||| ||||||| | |    
T  33256071 gaagaacagaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtttgaagagaagtgctcttgaagacaaaagtgctcctgaagtgatgacatta 33256170  T
Q  154 tcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    || |||||||| |||||||||||||||||| |||||||| ||||||    
T  33256171 tcagaagcaagttcatcagaagcatctcatcagaagcaagatcacc 33256216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 199
Target Start/End: Original strand, 33276243 - 33276388
Alignment:
Q  56 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 153  Q
    |||||||| | |||||||| ||||| ||||| || ||||||| | |||| |||||| ||||| |  ||||| |||  || ||| |||| ||||||| | |    
T  33276243 gaagaacagaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtttgaagagaagtgctcttgaagacaaaagtgctcctgaagtgatgacatta 33276342  T
Q  154 tcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    || |||||||| |||||||||||||||||| |||||||| ||||||    
T  33276343 tcagaagcaagttcatcagaagcatctcatcagaagcaagatcacc 33276388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 98
Target Start/End: Original strand, 24227658 - 24227749
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||| ||||||| ||||||||||||||||| |  | |||||||| |||||| ||||||||||||||||||||||||  |||| |||||||||||    
T  24227658 tgtgcaggagcatagacaaaaatttagtgtgtt-taaaagcataggttctg-aagaacaaatgagagcaatggaatctacaaaaaggaagcttg 24227749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 19717818 - 19717739
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||  |||| ||| |||| |||||||||||||  ||||||| |||||||||||||||||| |||||||| ||||||    
T  19717818 tctgaagagaagtgctcctgaagtgatgacgtcatcataagcaagttcatcagaagcatctcatcagaagcaagatcacc 19717739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 22154241 - 22154162
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca 129  Q
    |||||||||||||||| ||||||||  |||| ||||| || |||||||||||||| |||||| ||||| | |||||||||    
T  22154241 gttctggaagaacaaaagagagcaaatgaatcaacaaaaatgaagcttgaagcgtctgaagagaagtgctcctgaagtca 22154162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 190
Target Start/End: Complemental strand, 35402143 - 35402033
Alignment:
Q  82 aacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca--agttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatc 179  Q
    ||||| ||||||||||||||| | |||||| ||| | | |||||| ||  ||| ||| |||| ||||||| ||||| |||||||| ||||||||||||||    
T  35402143 aacaaaaaggaagcttgaagcatatgaagagaagcgctcctgaagacacaagtgctcctgaagtgatgacctcatcagaagcaagttcatcagaagcatc 35402044  T
Q  180 tcattagaagc 190  Q
    |||| ||||||    
T  35402043 tcatcagaagc 35402033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 12284780 - 12284678
Alignment:
Q  76 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaa 174  Q
    ||||| ||||| ||||||||||||| | | |||||| ||||| | |||||||||| || ||  |||| ||||||||||||| |||||||| |||||||||    
T  12284780 ggaatcaacaaaaaggaagcttgaaacatctgaagagaagtgctcctgaagtcaaagtgcttctgaagtgatgacgtcatcagaagcaagttcatcagaa 12284681  T
Q  175 gca 177  Q
    |||    
T  12284680 gca 12284678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 36134541 - 36134480
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 111  Q
    |||||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | ||||||    
T  36134541 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaaga 36134480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 1090258 - 1090314
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||||| ||| |||||||||||||||||||||||||| |||| |||| ||||||    
T  1090258 aagcataaggtctagaagaacaaatgagagcaatggaatttacaaaaagggagcttg 1090314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 42 - 98
Target Start/End: Original strand, 20109680 - 20109736
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| ||||||||||||||||||||| |||||||||  |||| |||||||||||    
T  20109680 aagcataggttctggaagaacaaatgagaacaatggaatctacaaaaaggaagcttg 20109736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 168
Target Start/End: Complemental strand, 30893430 - 30893310
Alignment:
Q  50 gttctggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatg 147  Q
    |||||| |||| ||||| |||||| | ||||| |||||  ||||| |||||||| | |||||| ||||| | |||||||||| || ||| |||| |||||    
T  30893430 gttctgaaagagcaaattgagagctaaggaatcaacaaagaggaaacttgaagcatctgaagagaagtgctcctgaagtcaaagtactcctgaagtgatg 30893331  T
Q  148 acgtcatcggaagcaagatca 168  Q
    |||||||| ||||||||||||    
T  30893330 acgtcatcagaagcaagatca 30893310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 1900700 - 1900639
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 111  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||||| || ||| ||||||    
T  1900700 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaaacgtctgaaga 1900639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 19717872 - 19717795
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| ||| |||| ||||| || || |||||||||| |||||| |||||| ||||| | |||||||    
T  19717872 gttctggaagaacaaaagagggcaaaggaatcaataaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagt 19717795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 117
Target Start/End: Original strand, 20954173 - 20954234
Alignment:
Q  56 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    |||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| |||||    
T  20954173 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtg 20954234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 48704567 - 48704490
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| |||||||||| ||| ||||| || |||||||||||| | | |||| ||||| | |||||||    
T  48704567 gttctggaagaacaaaagagagcaatgaaatcaacaaaaatgaagcttgaagcatctaaagagaagtgctcctgaagt 48704490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 2267419 - 2267296
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaaatgatgacgtc 152  Q
    |||||||||||  ||||| || | ||| ||||| |||||||||| |||| | ||||||||| || |||||||| || ||| ||| |||| |  |||||||    
T  2267419 tggaagaacaatagagagtaaagaaatcaacaaaaaggaagcttaaagcatatgaagaaaactgcttctgaagacatagtgctcctgaagtagtgacgtc 2267320  T
Q  153 atcggaagcaagatcatcagaagc 176  Q
    ||  |||||||| |||||||||||    
T  2267319 attagaagcaagttcatcagaagc 2267296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 190
Target Start/End: Original strand, 23036273 - 23036383
Alignment:
Q  82 aacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag--tcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatc 179  Q
    ||||| ||||||||||||||| | |||| | ||| | | ||||||   ||||| ||| |||| ||||||| ||||| |||||||  ||||||||||||||    
T  23036273 aacaaaaaggaagcttgaagcatctgaatagaagcgctcctgaagacacaagtgctcctgaagtgatgacatcatcagaagcaatttcatcagaagcatc 23036372  T
Q  180 tcattagaagc 190  Q
    |||| ||||||    
T  23036373 tcatcagaagc 23036383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 46089307 - 46089218
Alignment:
Q  90 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||||||| ||| || ||||||||| || |  |||||||  |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  46089307 ggaagcttaaagtgtctgaagaaaactgctcatgaagtctgaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 46089218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 95
Target Start/End: Complemental strand, 16870323 - 16870278
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagc 95  Q
    |||||| |||||||||||||||||||| |||| |||| ||||||||    
T  16870323 gttctgaaagaacaaatgagagcaatgaaatttacaacaaggaagc 16870278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Original strand, 20954266 - 20954327
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||| ||| |||| ||||||||||||| ||  |||| |||||||||||||||||| ||||||    
T  20954266 aagtgctcctgaagtgatgacgtcatcagattcaagttcatcagaagcatctcatcagaagc 20954327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 175
Target Start/End: Original strand, 21134986 - 21135023
Alignment:
Q  138 tgaaatgatgacgtcatcggaagcaagatcatcagaag 175  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  21134986 tgaaatgatgacgtcatcagaagcaagttcatcagaag 21135023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 32785665 - 32785729
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||||||  || |||||  |||| ||||| |||||||||| |||||| |||||||||    
T  32785665 gttctggaagaacaatagaaagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagaaaa 32785729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 199
Target Start/End: Complemental strand, 22272519 - 22272342
Alignment:
Q  23 aaaatttagtgtctcctt-aaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttc 121  Q
    ||||||||||||||| || |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||   |||||||||| | |||    
T  22272519 aaaatttagtgtctcttttaaagcataggttctggaagaacaaatgagagcaatggaatcaacaagaaggaaggttgaagcaactgaagaaaagagtttc 22272420  T
Q  122 tgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||||||||| | ||| |||| ||||||||||||  ||| |||| ||||||||| || ||||| |||||||||||||||    
T  22272419 tgaagtcaaatactcctgaagtgatgacgtcattagaaacaagttcatcagaaacacctcatcagaagcaacatcacc 22272342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 125
Target Start/End: Complemental strand, 19115518 - 19115411
Alignment:
Q  18 agacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    ||||| |||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |    
T  19115518 agacacaaatttagtgtctctttaaaccataggttctggaagaacaaatgagagcaatggaatcaacaggaaggaagcttgaagcgtctgaagaaaagag 19115419  T
Q  118 gttctgaa 125  Q
    ||||||||    
T  19115418 gttctgaa 19115411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 162
Target Start/End: Complemental strand, 44881539 - 44881398
Alignment:
Q  23 aaaatttagtgtctcctt--aaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggtt 120  Q
    ||||||||||||||| ||  || ||||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||||| | |||||||||| | ||    
T  44881539 aaaatttagtgtctctttttaaggcataggttctggaagaacaaatgagagcaatgaaatcaacaagaaggaagcttgaagcatctgaagaaaagagatt 44881440  T
Q  121 ctgaagtcaagttctcttgaaatgatgacgtcatcggaagca 162  Q
     ||||||||||| ||| |||| || |||||||||| ||||||    
T  44881439 ttgaagtcaagtgctcctgaagtgctgacgtcatcagaagca 44881398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 26618800 - 26618920
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctcctt-aaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcg 103  Q
    |||| |||| || |||||||||||||||||||| || |||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||| |    
T  26618800 tgtgcaggaccatagacaaaaatttagtgtctcttttaaagcata-gatctggaagaacaaatgagagcaatggaatcaacaagaaggaagcttgaagag 26618898  T
Q  104 tgtgaagaaaagtggttctgaa 125  Q
    | |||||||||| |||| ||||    
T  26618899 tctgaagaaaagaggttatgaa 26618920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 24850404 - 24850544
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    ||||| |||||||||| |||||| | ||||| ||||| ||||||||||||||| | |||||||||||| | |||||||||||| ||| |||| | |||||    
T  24850404 gttctcgaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagtcaagtgctcctgaagtaatgac 24850503  T
Q  150 gtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||| || |||||||| |||||||||||| ||||| ||||||    
T  24850504 gtcgtcagaagcaagttcatcagaagcacctcatcagaagc 24850544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 120
Target Start/End: Complemental strand, 18703166 - 18703064
Alignment:
Q  18 agacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    ||||||| |||||||||||| |||||||||| |||||  |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||| |    
T  18703166 agacaaacatttagtgtctctttaaagcataggttctacaagaacaagttagagcaatggaatcaacaagaaggaagcttgaagcgtctgaagaaaagag 18703067  T
Q  118 gtt 120  Q
    |||    
T  18703066 gtt 18703064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 127
Target Start/End: Original strand, 41121463 - 41121569
Alignment:
Q  21 caaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggtt 120  Q
    ||||||||||||||||  |||||| ||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| | |||||||| ||| |     
T  41121463 caaaaatttagtgtctttttaaagtataagttctcgaagaacaaatgaaagcaatggaataaacaagaaggaagcttgaagcatctgaagaaaggtgctc 41121562  T
Q  121 ctgaagt 127  Q
    |||||||    
T  41121563 ctgaagt 41121569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 22454728 - 22454869
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||||||||||||||| | |||| ||| ||| ||||| ||||||||||||||| | |||||||||||| | |||||||| ||| |||||||| |||| |    
T  22454728 gttctggaagaacaaattaagagctatgaaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagtctagtgctcttgaagtgataa 22454827  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||| || |||||||| |||||||||||| ||||| ||||||    
T  22454828 cgtcgtcagaagcaagctcatcagaagcacctcatcagaagc 22454869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 23235369 - 23235228
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 148  Q
    ||||| |||||||||| ||||||||| |||| ||||| ||| |||||| |||||| |||||| ||||| |  ||||||||| || ||| |||| ||||||    
T  23235369 gttctagaagaacaaaagagagcaattgaatcaacaaaaagtaagcttaaagcgtctgaagagaagtgctcttgaagtcaaagtgctcctgaagtgatga 23235270  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| |||||||| |||||||||||||||||| ||||||    
T  23235269 cgtcatcagaagcaagttcatcagaagcatctcatcagaagc 23235228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 30667351 - 30667210
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||  ||||||||| |||| ||||| ||||||||||||||| | |||||| ||||| | | |||||| |||| ||| |||| ||||||    
T  30667351 gttctggaagaacaatagagagcaattgaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcccgaagtcaaagtgctcctgaagtgatga 30667252  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| |||||||| || ||||||||||||||| ||||||    
T  30667251 cgtcatcagaagcaagttcgtcagaagcatctcatcagaagc 30667210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 39037394 - 39037521
Alignment:
Q  50 gttctggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||||||||||||||| |||||| ||||||| ||||| ||||||||||||||| | |||||| ||||| | ||||||| |||| ||  |||| ||||||    
T  39037394 gttctggaagaacaaattgagagctatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctactgaagttaagtgcttctgaagtgatga 39037493  T
Q  149 cgtcatcggaagcaagatcatcagaagc 176  Q
    ||||||| |||||||| |||||||||||    
T  39037494 cgtcatcagaagcaagttcatcagaagc 39037521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 25829466 - 25829338
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| ||||| | |||||| |  |||| ||| |||| |||||    
T  25829466 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatg 25829367  T
Q  148 acgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||||||||||| |||||||    
T  25829366 acgtcatcagaagcaagatcaccagaagc 25829338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 9015109 - 9015251
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt-caagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||||| | ||||||||||||| | |||||| ||||| |  ||||||  ||||  || |||| ||||||    
T  9015109 gttctggaagaacaaaagagagcaaaggaatcaacaaaatggaagcttgaagcatctgaagagaagtgctcttgaagtaaaagtgatcctgaagtgatga 9015208  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagca 191  Q
    ||||||| |||||||| ||||||||| || ||||| |||||||    
T  9015209 cgtcatcagaagcaagttcatcagaaacaactcatcagaagca 9015251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 18430677 - 18430753
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag 126  Q
    ||||||||||||||||||||||||||  ||| ||||||||||||||||||||||| |||||| ||| ||| ||||||    
T  18430677 gttctggaagaacaaatgagagcaatataatcaacaagaaggaagcttgaagcgtatgaagacaagaggtcctgaag 18430753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 162
Target Start/End: Complemental strand, 19540756 - 19540648
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 153  Q
    |||||||||||| |||||| | ||||| ||||| ||| |||||| |||||| |||||||||||| | |||||||| ||| ||| |||| |||||||||||    
T  19540756 tggaagaacaaaagagagctaaggaatcaacaaaaagaaagcttaaagcgtctgaagaaaagtgttcctgaagtctagtgctcctgaagtgatgacgtca 19540657  T
Q  154 tcggaagca 162  Q
    || ||||||    
T  19540656 tcagaagca 19540648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 22260767 - 22260616
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaag--ttctcttgaaatgatg 147  Q
    ||||| |||||||||| |||||||| ||||| ||||| ||||||| || | |||| |||||| ||||| | |||||| |||   | ||| |||| |||||    
T  22260767 gttctagaagaacaaaagagagcaaaggaatcaacaaaaaggaagtttaaggcgtctgaagagaagtgctcctgaagacaaaaatgctcctgaagtgatg 22260668  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||| |||||||| |||||| ||||||||||| ||||| || ||||||    
T  22260667 acgtcatcagaagcaagttcatcaaaagcatctcatcagaaggaagatcacc 22260616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 24576411 - 24576284
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||| ||| | |||||||||||| ||||| ||||||||||||| | | |||||| ||||| |  ||||||| |||| ||  |||| ||||||    
T  24576411 gttctggaagaaaaaaagggagcaatggaatcaacaaaaaggaagcttgaaacatatgaagataagtgttcatgaagtcaaagtgcttctgaagtgatga 24576312  T
Q  149 cgtcatcggaagcaagatcatcagaagc 176  Q
    ||||||| |||||||| |||||||||||    
T  24576311 cgtcatcagaagcaaggtcatcagaagc 24576284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 76 - 199
Target Start/End: Complemental strand, 40782806 - 40782681
Alignment:
Q  76 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaa-gtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcaga 173  Q
    ||||| ||||| ||||||||||||||| | |||||| ||||| | ||||| ||||| || ||| |||| ||||||||||||| |||||||| ||| ||||    
T  40782806 ggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaaagtcaaagtgctcctgaagtgatgacgtcatcagaagcaagttcaccaga 40782707  T
Q  174 agcatctcattagaagcaacatcacc 199  Q
    ||||| |||| |||||||| ||||||    
T  40782706 agcatttcatcagaagcaagatcacc 40782681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 20151792 - 20151915
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||  |||||||| | ||||||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| ||||||  |||||||    
T  20151792 tggaagaacaatagagagcaaagtaattaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaaatagtgacgtc 20151891  T
Q  153 atcggaagcaagatcatcagaagc 176  Q
    ||| ||| |||| |||||||||||    
T  20151892 atcagaaacaagttcatcagaagc 20151915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 189
Target Start/End: Original strand, 20568487 - 20568628
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatg 147  Q
    ||||| |||||||||| ||||| || ||||| ||||| |||||||||| |  ||| |||||| ||||| | |||||| |||  || ||| |||  |||||    
T  20568487 gttcttgaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaagacgtctgaagataagtgctcctgaagacaaaagtgctcatgaggtgatg 20568586  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaag 189  Q
    |||||||  |||||||| |||||||||||||||||| |||||    
T  20568587 acgtcatttgaagcaagttcatcagaagcatctcataagaag 20568628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 28140399 - 28140515
Alignment:
Q  76 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtcatcggaagcaagatcatcaga 173  Q
    ||||| ||||| ||||||||||  | ||| |||||| ||||| | ||||||||||  || ||| |||| |||||||||||||  ||||||| ||||||||    
T  28140399 ggaatcaacaaaaaggaagcttagaacgtctgaagagaagtgctcctgaagtcaaaagtgctcctgaagtgatgacgtcatcaaaagcaagttcatcaga 28140498  T
Q  174 agcatctcattagaagc 190  Q
    |||||||||| ||||||    
T  28140499 agcatctcatcagaagc 28140515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 10009560 - 10009639
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| |||||||||||||||||| ||||| || ||||||    
T  10009560 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagaaagatcacc 10009639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 20569829 - 20569774
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagctt 97  Q
    ||||||| |||||||||||||||||||||||||||||||  |||| ||||||||||    
T  20569829 aagcataggttctggaagaacaaatgagagcaatggaatctacaaaaaggaagctt 20569774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 21536991 - 21537126
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 153  Q
    |||||||||||| |||||| ||| ||| ||||| |||||| ||| ||   | |||||| ||||| | |||||||| ||| ||| |||| | |||||||||    
T  21536991 tggaagaacaaaagagagctatgaaatcaacaaaaaggaaacttaaaatatctgaagagaagtgctcctgaagtctagtgctcctgaagtaatgacgtca 21537090  T
Q  154 tcggaagcaagatcatcagaagcatctcattagaag 189  Q
    || |||||||| ||| |||||||| ||||| |||||    
T  21537091 tcagaagcaagctcaccagaagcacctcatcagaag 21537126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 190
Target Start/End: Original strand, 22187911 - 22187981
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  22187911 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 22187981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 18376675 - 18376752
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||||||||||| | ||||||||| || | |||||||    
T  18376675 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagaaaaatgctcctgaagt 18376752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 38781742 - 38781681
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaaga 111  Q
    |||||||||||||||| ||||||||| |||| ||||| ||||||||||||||| | ||||||    
T  38781742 gttctggaagaacaaaagagagcaattgaatcaacaaaaaggaagcttgaagcatctgaaga 38781681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 30621549 - 30621437
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||  |||||||||||||| ||||| |||||||||| |||| | | |||| ||||| |   |||||| |||| ||| |||| ||||||    
T  30621549 gttctggaagaacaatagagagcaatggaatcaacaaaaaggaagcttcaagcatctaaagagaagtgctctcgaagtcaaagtgctcctgaagtgatga 30621450  T
Q  149 cgtcatcggaagc 161  Q
    ||||||| |||||    
T  30621449 cgtcatcagaagc 30621437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 161
Target Start/End: Complemental strand, 30624170 - 30624058
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||  |||||||||||||| ||||| |||||||||| |||| | | |||| ||||| |   |||||| |||| ||| |||| ||||||    
T  30624170 gttctggaagaacaatagagagcaatggaatcaacaaaaaggaagcttcaagcatctaaagagaagtgctctcgaagtcaaagtgctcctgaagtgatga 30624071  T
Q  149 cgtcatcggaagc 161  Q
    ||||||| |||||    
T  30624070 cgtcatcagaagc 30624058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 138 - 190
Target Start/End: Complemental strand, 38781670 - 38781618
Alignment:
Q  138 tgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||| ||||||||||||| |||||||| |||||||||||||||||| ||||||    
T  38781670 tgaagtgatgacgtcatcagaagcaagttcatcagaagcatctcatcagaagc 38781618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 6573880 - 6574003
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||  | |||||| ||||||||||| |||||||||| || | | ||||||||| || |||||||| | |||| ||| | || |  |||||||    
T  6573880 tggaagaacaatagggagcaaaggaattaacaaaaaggaagcttaaaacatctgaagaaaaatgcttctgaagacaaagtgctcctaaagtagtgacgtc 6573979  T
Q  153 atcggaagcaagatcatcagaagc 176  Q
    ||| |||||||| |||||||||||    
T  6573980 atcagaagcaagttcatcagaagc 6574003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 24302694 - 24302742
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||||||||||||||||||||||| |||| |||| |||| ||||||    
T  24302694 gttctggaagaacaaatgagagcaatgaaatttacaaaaagggagcttg 24302742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 24440503 - 24440551
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||| |||||||||| ||||||||||||||| |||| |||||||||||    
T  24440503 gttctagaagaacaaacgagagcaatggaatttacaaaaaggaagcttg 24440551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 44840687 - 44840639
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||||||||||||||||    
T  44840687 aagtgctcctgaagtgatgacgtcatcagaagcaagatcatcagaagca 44840639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 23184103 - 23184162
Alignment:
Q  68 agagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    ||||| ||||||| ||||| ||||||||||||||| | |||||||||||| | |||||||    
T  23184103 agagctatggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagt 23184162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 127
Target Start/End: Original strand, 23595360 - 23595419
Alignment:
Q  68 agagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    ||||| ||||||| ||||| ||||||||||||||| | |||||||||||| | |||||||    
T  23595360 agagctatggaatcaacaaaaaggaagcttgaagcatctgaagaaaagtgctcctgaagt 23595419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 7609214 - 7609172
Alignment:
Q  157 gaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||| |||||||||||||||||| |||||||| ||||||    
T  7609214 gaagcaagttcatcagaagcatctcatcagaagcaagatcacc 7609172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 99
Target Start/End: Complemental strand, 21846458 - 21846404
Alignment:
Q  45 cataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 99  Q
    |||| |||||| |||||||||||||||||||  |||| |||| ||||||||||||    
T  21846458 cataggttctgaaagaacaaatgagagcaataaaatttacaaaaaggaagcttga 21846404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 25037096 - 25037138
Alignment:
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  25037096 acgtcatcagaagcaagttcatcagaagcatctcatcagaagc 25037138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 190
Target Start/End: Original strand, 25041203 - 25041245
Alignment:
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||||||| |||||||| |||||||||||||||||| ||||||    
T  25041203 acgtcatcagaagcaagttcatcagaagcatctcatcagaagc 25041245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 25189715 - 25189637
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    ||||||||||||||||| | |||| |||||||  |||| ||||||||||||||| | |||| ||||||| | |||||||    
T  25189715 gttctggaagaacaaattaagagctatggaatcgacaaaaaggaagcttgaagcatctgaacaaaagtgctcctgaagt 25189637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 22187861 - 22187934
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    ||||||||||||  ||||||| ||||| | ||| ||||||||||||||| | |||||| ||||| | |||||||    
T  22187861 tggaagaacaaaatagagcaaaggaatcagcaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 22187934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 25037006 - 25037086
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 130  Q
    |||||||||||| ||| |||||||| ||||| ||||| || ||||||| |||| | |||||| ||||| |  |||||||||    
T  25037006 gttctggaagaaaaaaagagagcaaaggaatcaacaaaaacgaagcttaaagcatctgaagagaagtgctcatgaagtcaa 25037086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 25041113 - 25041193
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 130  Q
    |||||||||||| ||| |||||||| ||||| ||||| || ||||||| |||| | |||||| ||||| |  |||||||||    
T  25041113 gttctggaagaaaaaaagagagcaaaggaatcaacaaaaacgaagcttaaagcatctgaagagaagtgctcatgaagtcaa 25041193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 25918967 - 25918931
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaa 86  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  25918967 gttctagaagaacaaatgagagcaatggaatttacaa 25918931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 33074507 - 33074459
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  33074507 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 33074459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 126
Target Start/End: Complemental strand, 38631316 - 38631240
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag 126  Q
    ||||||||| |||||| |||||||| | ||| ||||| || |||||||||||| | |||||| ||||| | ||||||    
T  38631316 gttctggaaaaacaaaagagagcaaagaaatcaacaaaaatgaagcttgaagcatctgaagagaagtgctcctgaag 38631240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 87; Significance: 9e-42; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 43652 - 43798
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag-tcaagttctcttgaaatgatgacgtc 152  Q
    ||||||||||||| ||||||||||||| | ||||||||||||||||||| | |||||||||| |||||||||| |||||| |||||||| ||||||||||    
T  43652 tggaagaacaaattagagcaatggaatcagcaagaaggaagcttgaagcatctgaagaaaagaggttctgaagttcaagtgctcttgaagtgatgacgtc 43751  T
Q  153 atcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||| |||||||| |||||||||||| || || |||||||||||||||    
T  43752 atcagaagcaagttcatcagaagcacctaatcagaagcaacatcacc 43798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 19707894 - 19707720
Alignment:
Q  18 agacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    ||||||||||| |||||||  |||||| ||| ||| |||||||||||||||| |||||||||| ||||| ||||||||||||||  | ||||||||||||    
T  19707894 agacaaaaattaagtgtctatttaaagtataggttatggaagaacaaatgagggcaatggaatcaacaaaaaggaagcttgaagaatctgaagaaaagtg 19707795  T
Q  118 gttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaa 192  Q
     | ||||||| |||| ||| |||| ||||||| ||||| |||||||| |||| ||||||| ||||||||||||||    
T  19707794 ctcctgaagttaagtgctcctgaagtgatgacatcatcagaagcaagttcattagaagcacctcattagaagcaa 19707720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 18730767 - 18730914
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||||||||||||||| | |||||||||||| ||||| ||| ||||||||||||| |||||||||||| || ||||||||||||||| |||||||||||    
T  18730767 gttctggaagaacaaattaagagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagtgattatgaagtcaagttctcatgaaatgatga 18730866  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatc 196  Q
    ||||||| |||||||| | ||||||||||  |||| |||||| |||||    
T  18730867 cgtcatcagaagcaagttgatcagaagcacttcatcagaagctacatc 18730914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 22461376 - 22461503
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || |||||||||||||||||||| |||||||||| |||||| ||||||||| |||||||||||||| ||||||||||||||||||| |||    
T  22461376 tgtgcaggaccatagacaaaaatttagtgtctctttaaagcataggttctgtaagaacaaaagagagcaatggaatcaacaagaaggaagcttgaaacgt 22461475  T
Q  105 gtgaagaaaagtggttctgaagtcaagt 132  Q
     |||||||||| |||| ||||| |||||    
T  22461476 ctgaagaaaagaggttttgaagacaagt 22461503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 18685202 - 18685328
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||||||||||||||| | |||||||||||| ||||| ||| ||||||||||||| |||||||||||| || ||||||||||||||| |||||||||||    
T  18685202 gttctggaagaacaaattaagagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagtgattatgaagtcaagttctcatgaaatgatga 18685301  T
Q  149 cgtcatcggaagcaagatcatcagaag 175  Q
    ||||||| |||||||| | ||||||||    
T  18685302 cgtcatcagaagcaagttgatcagaag 18685328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 199
Target Start/End: Original strand, 20382187 - 20382337
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||| ||||||||| ||||| |||||||| ||||| ||||||||||||||||| |||||| ||||| | |||||||| |||| ||| |||| ||||||    
T  20382187 gttctgaaagaacaaaagagagtaatggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatga 20382286  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||  ||||||| |||||||||||||||||| |||||||| ||||||    
T  20382287 cgtcatcaaaagcaagttcatcagaagcatctcatcagaagcaagatcacc 20382337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 50 - 196
Target Start/End: Original strand, 18722422 - 18722569
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||||||||||||||| | |||||||||||| ||||| ||| ||||||||||||| |||||||||||| || ||||||||||||||| ||||||||| |    
T  18722422 gttctggaagaacaaattaagagcaatggaatcaacaaaaagaaagcttgaagcgtatgaagaaaagtgattatgaagtcaagttctcatgaaatgatca 18722521  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatc 196  Q
    ||||||  |||||||| | ||||||||||  |||| |||||| |||||    
T  18722522 cgtcattagaagcaagttgatcagaagcacttcatcagaagctacatc 18722569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 177
Target Start/End: Original strand, 19956133 - 19956270
Alignment:
Q  41 aaagcataagttctggaagaacaaatgagagcaat-ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttg 139  Q
    ||||| ||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||| |||| |||||  ||||||||| ||||| ||| ||    
T  19956133 aaagcttaagttctggaagaacaaatgagagcaattggaatcaacaagaaggaaacttgaagcgtctgaaaaaaagatgttctgaagacaagtgctcctg 19956232  T
Q  140 aaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    || ||||||||||||| ||||||| |||| || |||||    
T  19956233 aagtgatgacgtcatcagaagcaaaatcaccataagca 19956270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 22 - 199
Target Start/End: Complemental strand, 33083245 - 33083065
Alignment:
Q  22 aaaaatttagtgtctccttaaagcataagttctggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggtt 120  Q
    ||||||||||||||| ||||||| ||| ||| ||||||||| ||| |||||| ||||||| ||||| || ||||||| |||||| |||||| ||||| |     
T  33083245 aaaaatttagtgtctacttaaagtataggttttggaagaacgaattgagagctatggaatcaacaaaaaagaagcttaaagcgtctgaagagaagtgctc 33083146  T
Q  121 ctgaagtcaa--gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
     |||||||||  || |||||||| ||||||||||||  ||| |||| ||||| |||||| ||||| |||||||| ||||||    
T  33083145 ttgaagtcaaaagtgctcttgaagtgatgacgtcattagaaacaagttcatctgaagcaactcatcagaagcaagatcacc 33083065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 17267831 - 17267681
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| |||||   |||||||| |||| ||  |||| ||||||    
T  17267831 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgtgcctgaagtcaaagtgcttctgaagtgatga 17267732  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||| ||  |||||||| |||||| ||||||||||| |||||||| ||||||    
T  17267731 cgttattagaagcaagttcatcaaaagcatctcatcagaagcaagatcacc 17267681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 17914819 - 17914678
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 148  Q
    |||||||||||| ||| |||||||| ||||| ||||  ||||||||||||||| | |||||| ||||| | || ||||||| || |||||||| | ||||    
T  17914819 gttctggaagaataaaagagagcaaaggaatcaacagaaaggaagcttgaagcatctgaagagaagtgctcctaaagtcaaagtgctcttgaagtaatga 17914720  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||  |||||||| |||||||||||||||||| ||||||    
T  17914719 cgtcattagaagcaagttcatcagaagcatctcatcagaagc 17914678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 19943597 - 19943456
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaac-aagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||| |||||||||| ||||| |||||||| ||| || || |||||||||||| | |||||| ||||| | |||||||  ||| ||| |||| ||||||    
T  19943597 gttctagaagaacaaaagagagtaatggaatcaaccaaaaaagaagcttgaagcatctgaagagaagtgctcctgaagtatagtgctcctgaagtgatga 19943498  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    || ||||||||||||| |||||||||||||||||| ||||||    
T  19943497 cgacatcggaagcaagttcatcagaagcatctcatcagaagc 19943456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 20 - 132
Target Start/End: Complemental strand, 18773017 - 18772906
Alignment:
Q  20 acaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggt 119  Q
    ||||||||||||||||||  ||||| | |||||||| ||||||||||||||||||||||||  |||| |||||| |||||||| | |||||||||| |||    
T  18773017 acaaaaatttagtgtctctctaaagtacaagttctg-aagaacaaatgagagcaatggaatctacaaaaaggaaacttgaagcatttgaagaaaagaggt 18772919  T
Q  120 tctgaagtcaagt 132  Q
    ||||||| |||||    
T  18772918 tctgaagacaagt 18772906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 19156542 - 19156415
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 148  Q
    ||||| |||||||||| |||||||| || || ||||| |||||||||| |||||| |||||| ||||| | |||||||||| || ||| |||| ||||||    
T  19156542 gttctagaagaacaaaagagagcaaagggatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatga 19156443  T
Q  149 cgtcatcggaagcaagatcatcagaagc 176  Q
    | ||||| |||||||| |||||||||||    
T  19156442 catcatcagaagcaagttcatcagaagc 19156415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 602526 - 602652
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||| ||||||||| | |||| ||| | | |||||||| ||| ||| |||| |||||||    
T  602526 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagtttgaagcgtctaaagagaagcgttgctgaagtctagtgctcctgaagtgatgac 602625  T
Q  150 gtcatcggaagcaagatcatcagaagc 176  Q
    |||||| |||||||| |||||| ||||    
T  602626 gtcatcagaagcaagttcatcaaaagc 602652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 17441614 - 17441727
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||| | |||||||||| |||||| |||||| ||||| | |||||||| |||| ||| |||| ||||||    
T  17441614 gttctggaagaacaaaagagagcaaaggaatcaacgaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatga 17441713  T
Q  149 cgtcatcggaagca 162  Q
    ||||||| ||||||    
T  17441714 cgtcatcagaagca 17441727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 20255359 - 20255500
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatga 148  Q
    ||||||||| |||||| |||||||| ||||| ||||| ||||||| || |||||| |||||| || || | |||||||||| || ||| |||| ||||||    
T  20255359 gttctggaacaacaaaagagagcaaaggaatcaacaaaaaggaagtttaaagcgtctgaagagaactgctcctgaagtcaaagtgctcctgaagtgatga 20255458  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||||||  ||| ||| |||||||||| ||||||| ||||||    
T  20255459 cgtcatcataaggaagttcatcagaagtatctcatcagaagc 20255500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 198
Target Start/End: Original strand, 16681097 - 16681245
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatg 147  Q
    |||||||||||||||  || |||||  |||| ||||| || ||||||| |||||| |||||| ||||| | |||||| |||  || ||| |||| |||||    
T  16681097 gttctggaagaacaa--gatagcaaatgaatcaacaaaaatgaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcatgaagtgatg 16681194  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
    |||||||| |||||||| |||||||||||||||||| | |||||| |||||    
T  16681195 acgtcatcagaagcaagttcatcagaagcatctcatcataagcaagatcac 16681245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 190
Target Start/End: Complemental strand, 24646693 - 24646557
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 153  Q
    |||||||||||| || | ||||||||| ||||| ||||||||||||||| | |  ||| ||||| | |||||||  ||| ||  |||| |||||||||||    
T  24646693 tggaagaacaaaagataccaatggaatcaacaaaaaggaagcttgaagcatctagagagaagtgctcctgaagtatagtgcttctgaagtgatgacgtca 24646594  T
Q  154 tcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    || |||||||| ||||||||||||||| || ||||||    
T  24646593 tcagaagcaagttcatcagaagcatcttatcagaagc 24646557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 199
Target Start/End: Original strand, 17525523 - 17525671
Alignment:
Q  52 tctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgat-gacg 150  Q
    |||| ||||||||| |||||||| | ||| ||||| || |||| ||||||| | |||| | ||||| | |||||| ||||| ||| |||| |||| |||     
T  17525523 tctgaaagaacaaaagagagcaaagaaatcaacaaaaatgaagattgaagcatctgaaaagaagtgctcctgaagacaagtgctcctgaagtgattgaca 17525622  T
Q  151 tcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||||| |||||||| || ||||||||||||||| |||||||| ||||||    
T  17525623 tcatcagaagcaagttcgtcagaagcatctcatcagaagcaagatcacc 17525671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 56 - 183
Target Start/End: Complemental strand, 29693671 - 29693541
Alignment:
Q  56 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa---gttctcttgaaatgatgacgtc 152  Q
    |||||||||| |||||||  ||||| ||||| |||||||||| |||| | |||||| ||||| |  ||||| |||   || ||| |||| ||||||||||    
T  29693671 gaagaacaaaagagagcagaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagacaaaaagtgctcctgaagtgatgacgtc 29693572  T
Q  153 atcggaagcaagatcatcagaagcatctcat 183  Q
    ||| |||||||| ||||||||||||||||||    
T  29693571 atcagaagcaagttcatcagaagcatctcat 29693541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 23772770 - 23772679
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||| ||||||| ||||||||||||||||| |  | |||||||| |||||| ||||||||||||||||||||||||  |||| |||||||||||    
T  23772770 tgtgcaggagcatagacaaaaatttagtgtgtt-taaaagcataggttctg-aagaacaaatgagagcaatggaatctacaaaaaggaagcttg 23772679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 39693895 - 39693754
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    ||||||||||||| || ||||||||  |||| ||||| || ||||||| |||| |  ||||| ||||| |||||||||| |||| | | |||| ||||||    
T  39693895 gttctggaagaacgaaagagagcaaatgaatcaacaaaaaagaagcttaaagcatccgaagagaagtgcttctgaagtcaaagtgcacctgaagtgatga 39693796  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| ||| |||| |||||| |||||| |||| ||||||    
T  39693795 cgtcatcagaaacaagttcatcaaaagcatgtcatcagaagc 39693754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 141
Target Start/End: Complemental strand, 16189359 - 16189267
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaa 141  Q
    |||||||||||||||| ||||||||  |||| ||||| ||||||||||||||||| |||||| ||||| |  |||||||| ||| ||||||||    
T  16189359 gttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcttgaagtcacagtgctcttgaa 16189267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 17702086 - 17702006
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 130  Q
    ||||||||| |||||| |||||  ||||||| ||||| ||||||||||||||| | |||||| ||||| ||||||||||||    
T  17702086 gttctggaataacaaaagagagttatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaagtcaa 17702006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 18120915 - 18121028
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| ||||||||  |||| ||||| |||||||||| |||||| |||||| || || | |||||| | |||| ||| |||| ||||||    
T  18120915 gttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttaaagcgtttgaagagaactgctcctgaagacaaagtgctcctgaagtgatga 18121014  T
Q  149 cgtcatcggaagca 162  Q
    || |||| ||||||    
T  18121015 cgccatcagaagca 18121028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 16189248 - 16189192
Alignment:
Q  143 tgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||||||| ||||| |||||||| |||||||||| |||||||||||||||| ||||||    
T  16189248 tgatgacatcatcagaagcaagttcatcagaagtatctcattagaagcaagatcacc 16189192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 130
Target Start/End: Complemental strand, 21933261 - 21933181
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa 130  Q
    |||||||||||||||  |||||||| ||||| ||||| |||||||||| |||||| |||||| || || | ||||||||||    
T  21933261 gttctggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaactgctcctgaagtcaa 21933181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 23263493 - 23263552
Alignment:
Q  138 tgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatca 197  Q
    |||| ||||||||||||| |||||||| |||||||||||| ||||| |||||||| ||||    
T  23263493 tgaagtgatgacgtcatcagaagcaagttcatcagaagcacctcatcagaagcaagatca 23263552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 177
Target Start/End: Complemental strand, 18680132 - 18680031
Alignment:
Q  76 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaa 174  Q
    ||||| ||||| |||||||||| |||| | |||||| | ||| | |||||||||| || ||| |||| ||||||||||||| |||||||| |||||||||    
T  18680132 ggaatcaacaaaaaggaagctttaagcatctgaagaga-gtgctcctgaagtcaaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaa 18680034  T
Q  175 gca 177  Q
    |||    
T  18680033 gca 18680031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 22745776 - 22745706
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||||||  |||| ||| |||| |||||||||| || |||||||| |||||||||||||||||| ||||||    
T  22745776 tctgaagagaagtgctcatgaagtgatgacgtcgtcagaagcaagttcatcagaagcatctcatcagaagc 22745706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 18320982 - 18321059
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| || ||| ||||||| ||||| || |||||||||||| | |||||| ||||| | |||||||    
T  18320982 gttctggaagaacaaaagatagctatggaatcaacaaaaaagaagcttgaagcatctgaagagaagtgctcctgaagt 18321059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 26833416 - 26833360
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| |||||||||||||||||||||||||| ||||  |||| ||||| |||||    
T  26833416 aagcataggttctggaagaacaaatgagagcaatagaatctacaaaaaggaggcttg 26833360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 30421237 - 30421297
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||  |||||||| ||||||||||| |||||||||| |||||| |||| ||||    
T  30421237 tggaagaacaatagagagcaaaggaattaacaaaaaggaagcttaaagcgtctgaacaaaa 30421297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 22745830 - 22745763
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    ||||||||||||||||  ||||||| ||||| ||||| |||||||||| ||| || |||||| |||||    
T  22745830 gttctggaagaacaaaaaagagcaaaggaatcaacaaaaaggaagcttaaagtgtctgaagagaagtg 22745763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 102
Target Start/End: Complemental strand, 16207615 - 16207563
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagc 102  Q
    |||||||||||||||| ||||||||  |||| ||||| |||||| ||||||||    
T  16207615 gttctggaagaacaaaagagagcaaatgaatcaacaaaaaggaatcttgaagc 16207563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 98
Target Start/End: Original strand, 17916621 - 17916668
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    |||||| |||||||||||||||||||| |||| |||| |||||||||||    
T  17916621 gttctgaaagaacaaatgagagcaatgaaatttacaa-aaggaagcttg 17916668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 36105489 - 36105441
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  36105489 aagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 36105441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 40845260 - 40845308
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  40845260 aagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 40845308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 43640053 - 43640005
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  43640053 aagtgctcatgaagtgatgacgtcatcagaagcaagttcatcagaagca 43640005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 43645189 - 43645081
Alignment:
Q  54 tggaagaacaaatga-gagcaatggaattaacaagaag-gaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgt 151  Q
    ||||||||||||| | |||| ||||||| ||||| ||  |||||||||||| | ||||||| || | | |||||||  ||| ||| |||| |||||||||    
T  43645189 tggaagaacaaattaagagctatggaatcaacaaaaaaagaagcttgaagcatctgaagaatagcgctcctgaagtttagtgctcctgaagtgatgacgt 43645090  T
Q  152 catcggaag 160  Q
    |||||||||    
T  43645089 catcggaag 43645081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 79; Significance: 6e-37; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 23 - 199
Target Start/End: Original strand, 35898 - 36080
Alignment:
Q  23 aaaatttagtgtctcc-ttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa-----gt 116  Q
    |||||||||||||||  ||||| |||| |||||||||||||||||||||||||| |||| ||||||| ||||| ||||||  | |||||||||     |     
T  35898 aaaatttagtgtctctattaaaccataggttctggaagaacaaatgagagcaatagaatcaacaagatggaagtttgaaggatttgaagaaaaaaaaaga 35997  T
Q  117 ggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    | |||||||||||| | |||||||| ||||||||||||| |||||||| |||||||||||| ||||| |||||||||||||||    
T  35998 gcttctgaagtcaaatgctcttgaagtgatgacgtcatcagaagcaagttcatcagaagcacctcatcagaagcaacatcacc 36080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 25498 - 25546
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  25498 aagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 25546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 72; Significance: 8e-33; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 39 - 198
Target Start/End: Complemental strand, 159446 - 159288
Alignment:
Q  39 ttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctctt 138  Q
    |||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||||||||||| | |||||  ||||| |  ||| ||  ||| ||| |    
T  159446 ttaaagtataggttctggaagaacaaatgagagcaatggaatcaacaagaaagaagcttgaagcatctgaag-gaagtgctcatgatgtttagtgctcct 159348  T
Q  139 gaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcac 198  Q
    ||| ||||||||||||| |||||||| |||||||||||| ||||| ||||||||||||||    
T  159347 gaagtgatgacgtcatcagaagcaagttcatcagaagcacctcatcagaagcaacatcac 159288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 39779 - 39652
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| |||||||| | || |    
T  39779 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcttgaagtcataa 39680  T
Q  149 cgtcatcggaagcaagatcatcagaagc 176  Q
    || |||| |||||||| |||||||||||    
T  39679 cgacatcagaagcaagttcatcagaagc 39652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 137839 - 137712
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| |||||||| | || |    
T  137839 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcttgaagtcataa 137740  T
Q  149 cgtcatcggaagcaagatcatcagaagc 176  Q
    || |||| |||||||| |||||||||||    
T  137739 cgacatcagaagcaagttcatcagaagc 137712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 50 - 197
Target Start/End: Complemental strand, 212721 - 212573
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||||||||| ||| |||||| ||||| | |||||||| |||| ||| |||| | ||||    
T  212721 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaaacgtctgaagagaagtgctcctgaagtcaaagtgctcctgaagtaatga 212622  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatca 197  Q
    ||||||| |||||||| |||||||||||||||||| |||||||| ||||    
T  212621 cgtcatcagaagcaagttcatcagaagcatctcatcagaagcaagatca 212573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0334 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 10161 - 10011
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||| ||||||||| ||||| |||||||| ||||| ||||||||||||||| | |||||| || || |||||||||| |||| ||| |||| ||||||    
T  10161 gttctgaaagaacaaaagagaggaatggaatcaacaaaaaggaagcttgaagcatctgaagagaaatgcttctgaagtcaaagtgctcctgaagtgatga 10062  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||||||| |||||||| | |||||||||||||||| | |||||| ||||||    
T  10061 cgtcatcagaagcaagttaatcagaagcatctcatcataagcaagatcacc 10011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 183
Target Start/End: Original strand, 18368 - 18498
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||| |||| ||| |||| ||||||||||    
T  18368 tggaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcatgaagtgatgacgtc 18467  T
Q  153 atcggaagcaagatcatcagaagcatctcat 183  Q
    ||| |||||||| ||||||||||||||||||    
T  18468 atcagaagcaagttcatcagaagcatctcat 18498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 54 - 199
Target Start/End: Original strand, 19221 - 19367
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaa-ggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 152  Q
    |||||||||||| |||||| | ||| | ||||| || ||||||||||||||| |||||| ||||| | |||||||||||| ||| |||| |||| |||||    
T  19221 tggaagaacaaaagagagctaaggagtcaacaaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtcaagtgctcctgaagtgataacgtc 19320  T
Q  153 atcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||| |||||||| |||||||||||||||||| |||||||| ||||||    
T  19321 atcagaagcaagttcatcagaagcatctcataagaagcaagatcacc 19367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 20714 - 20855
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||| ||||||||| |||||| ||||| | ||||||| | ||| ||| |||| ||||||    
T  20714 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagtttgaagcgtctgaagagaagtgctcctgaagtaatagtgctcctgaagtgatga 20813  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| ||| |||| |||||||||||||||||||||||||    
T  20814 cgtcatcagaaacaagttcatcagaagcatctcattagaagc 20855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 1203 - 1360
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || |||||||| |||| |||||| ||||||| || |||||||||||||||||||||||||   ||| ||||||||||||||||||||| |    
T  1203 tgtgcaggaccatagacaaaagtttattgtctctttaaagcttaggttctggaagaacaaatgagagcaacataatcaacaagaaggaagcttgaagcat 1302  T
Q  105 gtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagca 162  Q
     |||||||||| |||||||||| ||||| ||| | || || ||| |||||| ||||||    
T  1303 ctgaagaaaagaggttctgaagacaagtgctccttaagtgttgatgtcatcagaagca 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 86
Target Start/End: Original strand, 3780 - 3817
Alignment:
Q  49 agttctggaagaacaaatgagagcaatggaattaacaa 86  Q
    ||||||||||||||||| |||||||||| |||||||||    
T  3780 agttctggaagaacaaaagagagcaatgaaattaacaa 3817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 200
Target Start/End: Original strand, 5434 - 5586
Alignment:
Q  50 gttctggaagaacaaa-tgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||||  |||| ||| | |||||| |||||||||| |||||| ||||| | ||||||| || || ||| |||| |||||    
T  5434 gttctggaagaacaaaatgagagcaaatgaatcaactaaaaggaaccttgaagcgtctgaagagaagtgctcctgaagtaaaagtgctcctgaagtgatg 5533  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacct 200  Q
    |||||||| |||||||| ||||||||||||||||| ||||||||| |||||||    
T  5534 acgtcatcagaagcaagttcatcagaagcatctcactagaagcaagatcacct 5586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 65; Significance: 1e-28; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 23881429 - 23881289
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    ||||| |||||||||| || ||||||||||| |||||||| |||||||||||||| |||||||||||| |  ||||||| | | ||| |||| |||||||    
T  23881429 gttctagaagaacaaaagatagcaatggaatcaacaagaatgaagcttgaagcgtctgaagaaaagtgctcttgaagtctactgctcctgaagtgatgac 23881330  T
Q  150 gtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
     ||||| |||||||| |||||||||||| ||||| ||||||    
T  23881329 atcatcagaagcaaggtcatcagaagcacctcatcagaagc 23881289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 57 - 183
Target Start/End: Original strand, 642488 - 642615
Alignment:
Q  57 aagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatc 155  Q
    |||||||||| |||||| |||||||  |||| ||||||||||||||||| |||||||||||| | |||||||||||| ||  |||| |||||||||||||    
T  642488 aagaacaaattgagagctatggaatcgacaaaaaggaagcttgaagcgtctgaagaaaagtgatcctgaagtcaagtgcttctgaagtgatgacgtcatc 642587  T
Q  156 ggaagcaagatcatcagaagcatctcat 183  Q
     |||||||| |||||||||||| |||||    
T  642588 agaagcaagttcatcagaagcacctcat 642615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 54 - 190
Target Start/End: Original strand, 21099482 - 21099619
Alignment:
Q  54 tggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtc 152  Q
    ||||||||||||| | |||| ||||||| ||||| ||||| ||||||||||| |||||||||||| |  ||||||||||| ||| |||| ||||||||||    
T  21099482 tggaagaacaaattaagagccatggaatcaacaaaaaggaggcttgaagcgtctgaagaaaagtgctcatgaagtcaagtgctcctgaagtgatgacgtc 21099581  T
Q  153 atcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||| |||||||| |||||| ||||| ||||| ||||||    
T  21099582 atcagaagcaagttcatcaaaagcacctcatcagaagc 21099619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 50 - 175
Target Start/End: Original strand, 89226 - 89352
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||| | ||||| ||||| |||||||||||||| || |||||| ||||| |||||||||| |||| ||  |||| ||||||    
T  89226 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagcttgaagtgtctgaagagaagtgcttctgaagtcaaagtgctactgaagtgatga 89325  T
Q  149 cgtcatcggaagcaagatcatcagaag 175  Q
    ||||||| |||||||||||| ||||||    
T  89326 cgtcatcagaagcaagatcaccagaag 89352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 17815331 - 17815180
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatg 147  Q
    |||||||||||||||| ||||| || ||||| ||||| |||||||||| || | | |||||| ||||| | |||||| |||  || ||| |||| |||||    
T  17815331 gttctggaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaaaacatctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatg 17815232  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||| | |||||| |||||||||||||||||| |||||||| ||||||    
T  17815231 acgtcatcagtagcaagttcatcagaagcatctcatcagaagcaagatcacc 17815180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 25096555 - 25096663
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || ||||||||||||||||| | |||||||| || ||||||  ||||||||||||||||||| ||| ||||||||||||| ||||||| |    
T  25096555 tgtgcaggaccatagacaaaaatttagtgtttacttaaagcgtaggttctgtgagaacaaatgagagcaatgaaatcaacaagaaggaagtttgaagcat 25096654  T
Q  105 gtgaagaaa 113  Q
     ||||||||    
T  25096655 ctgaagaaa 25096663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 113
Target Start/End: Original strand, 25154525 - 25154633
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || ||||||||||||||||| | |||||||| || ||||||  ||||||||||||||||||| ||| ||||||||||||| ||||||| |    
T  25154525 tgtgcaggaccatagacaaaaatttagtgtttacttaaagcgtaggttctgtgagaacaaatgagagcaatgaaatcaacaagaaggaagtttgaagcat 25154624  T
Q  105 gtgaagaaa 113  Q
     ||||||||    
T  25154625 ctgaagaaa 25154633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 21910890 - 21910762
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatg 147  Q
    ||||| |||||||||| ||||||||  |||| ||||| |||||||||| |||||| |||||| ||||| | |||||| |||  || ||| |||| |||||    
T  21910890 gttctagaagaacaaaagagagcaaatgaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcatgaagtgatg 21910791  T
Q  148 acgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||||||||||| |||||||    
T  21910790 acgtcatcagaagcaagatcaccagaagc 21910762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 176
Target Start/End: Complemental strand, 26784699 - 26784577
Alignment:
Q  56 gaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtca 153  Q
    |||||||||| |||||||| ||||| ||||| |||||||||| |||||| |||||| ||||| | |||||| |||  || ||| |||| | |||||||||    
T  26784699 gaagaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagacaaaagtgctcatgaagtcatgacgtca 26784600  T
Q  154 tcggaagcaagatcatcagaagc 176  Q
    || |||||||| |||||||||||    
T  26784599 tcagaagcaagttcatcagaagc 26784577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 176
Target Start/End: Original strand, 9398551 - 9398659
Alignment:
Q  68 agagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatc 167  Q
    ||||| ||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||||||| ||| |||| |||||||||||||   | |||| ||    
T  9398551 agagctatggaatcaacaaaaaggaagcttgaagcatttgaagagaagtgctgctgaagtcaagtgctcctgaagtgatgacgtcatcaacatcaagttc 9398650  T
Q  168 atcagaagc 176  Q
    |||||||||    
T  9398651 atcagaagc 9398659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 57 - 154
Target Start/End: Complemental strand, 6499578 - 6499480
Alignment:
Q  57 aagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcat 154  Q
    |||||||||| |||||| ||| ||| ||||| ||||||||||||||| | |||| | ||||| |||||||||||||| ||| |||| ||||||||||||    
T  6499578 aagaacaaattgagagctatgaaatcaacaaaaaggaagcttgaagcatctgaaaagaagtgtttctgaagtcaagtgctcatgaagtgatgacgtcat 6499480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 23412780 - 23412857
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    ||||||||||| |||| |||||||||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||    
T  23412780 gttctggaagagcaaaagagagcaatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 23412857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 33023008 - 33022885
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| || ||| |||| |||| || | |||||| | |||| || ||||| || |||||||    
T  33023008 tggaagaacaatcgagagcaaaggaatcaacaaaaaggaagcttaaaacgtctgaaaaaaactgctcctgaagacaaagtgcttttgaagtggtgacgtc 33022909  T
Q  153 atcggaagcaagatcatcagaagc 176  Q
    ||| |||||||| |||||||||||    
T  33022908 atcagaagcaagttcatcagaagc 33022885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 175
Target Start/End: Complemental strand, 5430228 - 5430106
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| ||||||  ||||||||||| | |||||| | |||| ||  |||| || |||||||    
T  5430228 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtccgaagaaaagtgctcctgaagacaaagtgcttctgaagtggtgacgtc 5430129  T
Q  153 atcggaagcaagatcatcagaag 175  Q
    ||| |||||||| ||||||||||    
T  5430128 atcagaagcaagttcatcagaag 5430106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 20551226 - 20551148
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaac-aagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| |||||||||||||| ||| || ||||||||||||||| | |||||| ||||| | |||||||    
T  20551226 gttctggaagaacaaaagagagcaatggaatcaacaaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 20551148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 22403848 - 22403925
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctcc--ttaaagcataagttctggaagaacaaatgagagcaatggaat 80  Q
    ||||||||| || |||||||||||||||||||    || ||||||| ||| |||||||||||||||||||||||||||    
T  22403848 tgtggaggaccatagacaaaaatttagtgtctttaattcaagcatatgttatggaagaacaaatgagagcaatggaat 22403925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 12352608 - 12352685
Alignment:
Q  51 ttctggaagaacaaat-gagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| |||||| ||||||| ||||| ||||||||||||||| | |||||| ||||| | |||||||    
T  12352608 ttctggaagaacaaattgagagctatggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgctcctgaagt 12352685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 4887367 - 4887243
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaagg-aagcttgaagcgtgtgaagaaaagtggttctgaag-tcaagttctcttgaaatgatgacgt 151  Q
    |||||||||||  |||||||| ||||| ||||| |||| |||||| |||||| ||||||||| || | || ||| | |||| ||| |||| |||||||||    
T  4887367 tggaagaacaatagagagcaaaggaatcaacaaaaagggaagcttaaagcgtctgaagaaaactgttcctaaagataaagtgctcctgaagtgatgacgt 4887268  T
Q  152 catcggaagcaagatcatcagaagc 176  Q
    |||| |||||||| |||| ||||||    
T  4887267 catcagaagcaagttcattagaagc 4887243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 192
Target Start/End: Original strand, 19536155 - 19536218
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaa 192  Q
    |||| ||| |||| ||||||||||||| |||| ||| |||||||||||||||||| ||||||||    
T  19536155 aagtgctcctgaagtgatgacgtcatcagaagtaagttcatcagaagcatctcatcagaagcaa 19536218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 120 - 190
Target Start/End: Complemental strand, 20551171 - 20551101
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| |||| ||||||||||||| ||||||    
T  20551171 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagctcattagaagcatctcatcagaagc 20551101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 25096667 - 25096732
Alignment:
Q  134 ctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||| |||| ||||||||||||| |||||||| |||||||||||| | | | |||||||||||||||    
T  25096667 ctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcaccccgtcagaagcaacatcacc 25096732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 25154637 - 25154702
Alignment:
Q  134 ctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    ||| |||| ||||||||||||| |||||||| |||||||||||| | | | |||||||||||||||    
T  25154637 ctcctgaagtgatgacgtcatcagaagcaagttcatcagaagcaccccgtcagaagcaacatcacc 25154702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 162
Target Start/End: Original strand, 21072030 - 21072142
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||||| |||||||||  ||||| | ||||| ||||| ||||||||||||||||| |||||| ||||| |  |||| |  ||| ||| |||| ||||||     
T  21072030 gttctgaaagaacaaaaaagagctaaggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcatgaaatttagtgctcctgaagtgatgag 21072129  T
Q  150 gtcatcggaagca 162  Q
    |||||| ||||||    
T  21072130 gtcatcagaagca 21072142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 29138222 - 29138310
Alignment:
Q  90 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||||||| |||||| ||||||||| || | |||||| ||| || ||| || | ||||||||||||| |||||||| ||||||||||||    
T  29138222 ggaagcttaaagcgtctgaagaaaactgttcctgaagacaaagtgctcctgtagtgatgacgtcatcagaagcaagttcatcagaagca 29138310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 7745436 - 7745503
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtg 117  Q
    |||||| ||||||||| ||||||||  | || ||||| ||||||||||||||||| |||||| |||||    
T  7745436 gttctgaaagaacaaaagagagcaaatggatcaacaaaaaggaagcttgaagcgtctgaagagaagtg 7745503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 30115704 - 30115792
Alignment:
Q  90 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||||| ||||||||| || | |||||||   |||| ||| |||| ||||||||||||  |||||||| |||||||||||    
T  30115704 ggaagcttaaagcgtctgaagaaaactgctcctgaagtttgaagtgctcctgaagtgatgacgtcattagaagcaagttcatcagaagc 30115792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 31118220 - 31118160
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| |||||||||    
T  31118220 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaa 31118160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0861 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0861
Description:

Target: scaffold0861; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 50 - 183
Target Start/End: Original strand, 4690 - 4824
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||||| ||||| ||||| ||||||| ||||||| | |||||| ||||| | |||||||| |||| ||| |||| ||||||    
T  4690 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagtttgaagcatctgaagagaagtgctcctgaagtcaaagtgctcctgaagtgatga 4789  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcat 183  Q
     |||||| |||||||| ||||||||||||||||||    
T  4790 tgtcatcagaagcaagttcatcagaagcatctcat 4824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 74976 - 74854
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || ||||||||||||||||||| ||||||| ||| |||||||||||||||| ||||||| |||||| ||||||||| ||| ||||||| |    
T  74976 tgtgtaggaccatagacaaaaatttagtgtctacttaaagtataggttctggaagaacaaacgagagcagtggaatcaacaagaagaaaggttgaagcat 74877  T
Q  105 gtgaagaaaagtggttctgaagt 127  Q
     |||||||||||| | |||||||    
T  74876 ctgaagaaaagtgctcctgaagt 74854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 191
Target Start/End: Original strand, 36523 - 36660
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 153  Q
    |||||||||||| |||||||||||||| ||  | ||||||||||||||| | |||||| ||||| | || ||||  ||| ||| |||| |||||||||||    
T  36523 tggaagaacaaaagagagcaatggaatcaaataaaaggaagcttgaagcatctgaagagaagtgatcctaaagtatagtgctcctgaagtgatgacgtca 36622  T
Q  154 tcggaagcaagatcatcagaagcatctcattagaagca 191  Q
    || |||||||| |||| ||||||||||||| |||||||    
T  36623 tcagaagcaagttcattagaagcatctcatcagaagca 36660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 191
Target Start/End: Complemental strand, 42482 - 42345
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtca 153  Q
    |||||||||||| |||||||||||||| ||  | ||||||||||||||| | |||||| ||||| | || ||||  ||| ||| |||| |||||||||||    
T  42482 tggaagaacaaaagagagcaatggaatcaaataaaaggaagcttgaagcatctgaagagaagtgatcctaaagtatagtgctcctgaagtgatgacgtca 42383  T
Q  154 tcggaagcaagatcatcagaagcatctcattagaagca 191  Q
    || |||||||| |||| ||||||||||||| |||||||    
T  42382 tcagaagcaagttcattagaagcatctcatcagaagca 42345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 10281 - 10169
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || |||||||||||||||||||  |||||| |||  |||||||||||| |||||||||||| |||| ||||||||||||||||||||| |    
T  10281 tgtgcaggaccatagacaaaaatttagtgtctatttaaagtatagattctggaagaacgaatgagagcaattgaatcaacaagaaggaagcttgaagcat 10182  T
Q  105 gtgaagaaaagtg 117  Q
     |||| |||||||    
T  10181 ctgaataaaagtg 10169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 8241 - 8109
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctcctt-aaagcataagttctggaagaacaaatgagagcaatggaatta----acaagaaggaagcttga 99  Q
    |||| |||| || |||||||||||||||||||| || |||||| | ||||||||||||||||||||||||||||||| |    |||||||| ||||||||    
T  8241 tgtgcaggaccatagacaaaaatttagtgtctcttttaaagcacatgttctggaagaacaaatgagagcaatggaatcaacgtacaagaagtaagcttga 8142  T
Q  100 agcgtgtgaagaaaagtggttctgaagtcaagt 132  Q
    ||| | |||||||||| |||||| ||| |||||    
T  8141 agcatctgaagaaaagaggttcttaagacaagt 8109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 145276 - 145150
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctccttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgt 104  Q
    |||| |||| || |||||||||||||||||||| |||||||| | |||||| |||||||||||||| ||||| |||  ||||||| |||||||||||| |    
T  145276 tgtgcaggaccatagacaaaaatttagtgtctctttaaagcacatgttctg-aagaacaaatgagaacaatgaaatctacaagaaagaagcttgaagcat 145178  T
Q  105 gtgaagaaaagtggttctgaagtcaagt 132  Q
     |||||||||| |||||| ||| |||||    
T  145177 ctgaagaaaagaggttctaaagacaagt 145150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 50 - 189
Target Start/End: Complemental strand, 12578 - 12437
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaag--tcaagttctcttgaaatgatg 147  Q
    |||||||||||||||| ||||| |||||||| ||||| ||||||||||||||| | |||| ||||||  | ||||||    |||| ||| |||  |||||    
T  12578 gttctggaagaacaaaagagagtaatggaatcaacaaaaaggaagcttgaagcatttgaataaaagttctcctgaagataaaagtgctcctgagctgatg 12479  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaag 189  Q
    |||||||| |||||||| |||||||||||||||||| |||||    
T  12478 acgtcatcagaagcaagttcatcagaagcatctcatcagaag 12437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 15446 - 15328
Alignment:
Q  57 aagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcg 156  Q
    ||||||||| |||||| | ||||| ||||| |||||||||| |||||| |||||| ||||| | |||||||||||| ||  |||| |||||||||||||     
T  15446 aagaacaaaagagagctaaggaatcaacaaaaaggaagcttaaagcgtctgaagagaagtgctcctgaagtcaagtgcttctgaagtgatgacgtcatca 15347  T
Q  157 gaagcaagatcatcagaag 175  Q
    |||||||||||| ||||||    
T  15346 gaagcaagatcaccagaag 15328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 50 - 190
Target Start/End: Complemental strand, 843 - 702
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagtt-ctcttgaaatgatga 148  Q
    ||||||||| |||||| |||||||| ||||| ||||| |||||||||| |||| | |||||| ||||| |  |||||||||  | ||| |||| ||||||    
T  843 gttctggaaaaacaaaagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagagaagtgctcttgaagtcaaaatgctcatgaagtgatga 744  T
Q  149 cgtcatcggaagcaagatcatcagaagcatctcattagaagc 190  Q
    ||||||| |||||||| | |||||||||||||||| ||||||    
T  743 cgtcatcagaagcaagtttatcagaagcatctcatcagaagc 702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 27188 - 27316
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||| || |||||| |||||||| ||||| ||||| ||||||||||||||| | |||||| ||||| |||||||| | |||| ||| |||| ||||||    
T  27188 gttctgaaataacaaaagagagcaaaggaatcaacaaaaaggaagcttgaagcatctgaagagaagtgcttctgaaggcaaagtgctcctgaagtgatga 27287  T
Q  149 cgtcatcggaagcaagatcatcagaagca 177  Q
    | ||||| |||||||| ||||||||||||    
T  27288 catcatcagaagcaagttcatcagaagca 27316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 52; Significance: 7e-21; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 2071 - 1944
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||| | ||||| ||||| || ||||||| ||| || |||||| ||||| | |||||||| |||| ||| |||| ||||||    
T  2071 gttctggaagaacaaaagagagcgaaggaatcaacaaaaatgaagcttaaagtgtctgaagagaagtgctcctgaagtcaaagtgctcatgaagtgatga 1972  T
Q  149 cgtcatcggaagcaagatcatcagaagc 176  Q
    ||||||| |||||||| |||||||||||    
T  1971 cgtcatcagaagcaaggtcatcagaagc 1944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 155
Target Start/End: Original strand, 9879 - 9985
Alignment:
Q  49 agttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatga 148  Q
    ||||||||||||||||| |||||||||||||| ||||| ||||||||||||||  | |||||| ||||| | |||||||  ||| ||| |||| ||||||    
T  9879 agttctggaagaacaaaagagagcaatggaatcaacaaaaaggaagcttgaagaatatgaagagaagtgctcctgaagtatagtgctcctgaagtgatga 9978  T
Q  149 cgtcatc 155  Q
    |||||||    
T  9979 cgtcatc 9985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 32840 - 32712
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatg 147  Q
    ||||| |||||||||| ||||| || ||||| ||||| |||||||||| | |||| |||||||||||| |||||||| |  |||| ||| |||| |||||    
T  32840 gttctagaagaacaaaagagagtaaaggaatcaacaaaaaggaagcttaaggcgtctgaagaaaagtgcttctgaagacaaaagtgctcctgaagtgatg 32741  T
Q  148 acgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||| ||| |||||||||||    
T  32740 acgtcatcagaagtaagttcatcagaagc 32712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 53 - 97
Target Start/End: Complemental strand, 49682 - 49638
Alignment:
Q  53 ctggaagaacaaatgagagcaatggaattaacaagaaggaagctt 97  Q
    ||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  49682 ctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagctt 49638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 54 - 176
Target Start/End: Original strand, 89818 - 89941
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||  |||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  89818 tggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaattgttcctgaagacaaagtgctcctgaagtggtgacgtc 89917  T
Q  153 atcggaagcaagatcatcagaagc 176  Q
    ||| |||||||| |||||||||||    
T  89918 atcagaagcaagttcatcagaagc 89941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 1095 - 1039
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| ||||||||||||||||| ||||||||| |||  |||| ||||| |||||    
T  1095 aagcataggttctggaagaacaaataagagcaatgtaatctacaaaaaggatgcttg 1039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1434 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold1434
Description:

Target: scaffold1434; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 76 - 199
Target Start/End: Original strand, 556 - 681
Alignment:
Q  76 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatgacgtcatcggaagcaagatcatcaga 173  Q
    ||||| ||||| |||||||||| ||| || |||||| ||||| | |||||| |||  || ||| |||| ||||||||||||  |||||||| ||||||||    
T  556 ggaatcaacaaaaaggaagcttaaagtgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatgacgtcattagaagcaagttcatcaga 655  T
Q  174 agcatctcattagaagcaacatcacc 199  Q
    |||||||||| |||||||| ||||||    
T  656 agcatctcatcagaagcaagatcacc 681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 46; Significance: 3e-17; HSPs: 4)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 8264 - 8136
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||| ||||| ||||| ||| |||||| | |||| |||||| ||||| | |||||| |  |||| ||| |||| |||||    
T  8264 gttctggaagaacaaaagagagcaaaggaatcaacaaaaagtaagcttaaggcgtctgaagagaagtgctcctgaagacaaaagtgctcctgaagtgatg 8165  T
Q  148 acgtcatcggaagcaagatcatcagaagc 176  Q
    |||||||| |||||||||| | |||||||    
T  8164 acgtcatcagaagcaagataaccagaagc 8136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 60383 - 60232
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaa--gttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||| ||||| ||||| || ||||||| | |||| |||||| || || |  ||||| |||  || ||| |||  |||||    
T  60383 gttctggaagaacaaaagagagcaaaggaatcaacaaaaatgaagcttaaggcgtctgaagagaaatgctcttgaagacaaaagtgctcctgatgtgatg 60284  T
Q  148 acgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||| || ||||| |||| ||||||||||||| |||||||| ||||||    
T  60283 acgtcatcagatgcaagttcattagaagcatctcataagaagcaagatcacc 60232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 199
Target Start/End: Original strand, 151722 - 151783
Alignment:
Q  138 tgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||| ||||||||||||| |||||||| |||||||||||| ||||| |||||||| ||||||    
T  151722 tgaagtgatgacgtcatcagaagcaagttcatcagaagcacctcatgagaagcaagatcacc 151783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 115816 - 115737
Alignment:
Q  121 ctgaagtcaa-gttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||||||| || ||| |||| |||||||||||||  ||||||| | |||||||||||||||| |||||||| ||||||    
T  115816 ctgaagtcaaagtgctcctgaagtgatgacgtcatcaaaagcaagtttatcagaagcatctcatcagaagcaagatcacc 115737  T

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Target: scaffold0337 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 50 - 176
Target Start/End: Complemental strand, 15029 - 14902
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatga 148  Q
    |||||||||||||||| |||||| | ||||| ||||| || ||||||| ||| || |||||| ||||| | || ||||| |||| ||| |||| ||| ||    
T  15029 gttctggaagaacaaaagagagcgaaggaatcaacaaaaatgaagcttaaagtgtctgaagagaagtgctccttaagtcaaagtgctcatgaagtgacga 14930  T
Q  149 cgtcatcggaagcaagatcatcagaagc 176  Q
    ||||||| |||||||| |||||||||||    
T  14929 cgtcatcagaagcaaggtcatcagaagc 14902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 66 - 190
Target Start/End: Complemental strand, 16131 - 16005
Alignment:
Q  66 tgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaa 163  Q
    ||||||| | ||||| ||||| ||||||||||||||| | |||||| | ||| | ||||||||  |||| ||| |||| ||||||| ||||| |||||||    
T  16131 tgagagctaaggaatcaacaaaaaggaagcttgaagcatctgaagagatgtgctcctgaagtcaaaagtgctcatgaagtgatgacatcatcagaagcaa 16032  T
Q  164 gatcatcagaagcatctcattagaagc 190  Q
    | ||||||||| |||||||| ||||||    
T  16031 gttcatcagaaccatctcatcagaagc 16005  T

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Target: scaffold1359 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 435 - 557
Alignment:
Q  54 tggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc-aagttctcttgaaatgatgacgtc 152  Q
    |||||||||||   ||||||| ||||| ||||| |||||||||| |||||| ||||||||| || | |||||| | |||| ||| |||| || |||||||    
T  435 tggaagaacaataaagagcaaaggaatcaacaaaaaggaagcttaaagcgtctgaagaaaactgctcctgaagacaaagtgctcctgaagtggtgacgtc 534  T
Q  153 atcggaagcaagatcatcagaag 175  Q
    ||| |||||||| ||||||||||    
T  535 atcagaagcaagttcatcagaag 557  T

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Target: scaffold0485 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0485
Description:

Target: scaffold0485; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 141
Target Start/End: Original strand, 9120 - 9211
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtca-agttctcttgaa 141  Q
    |||||||||||||||| ||||||||  |||| ||||| ||||||||||||||||| |||||| ||||| | ||||||||| ||| ||||||||    
T  9120 gttctggaagaacaaaagagagcaaatgaatcaacaa-aaggaagcttgaagcgtctgaagagaagtgatcctgaagtcacagtgctcttgaa 9211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0485; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 199
Target Start/End: Original strand, 9252 - 9301
Alignment:
Q  150 gtcatcggaagcaagatcatcagaagcatctcattagaagcaacatcacc 199  Q
    |||||| |||| ||| |||||||||||||||||| |||||||| ||||||    
T  9252 gtcatcagaagaaagttcatcagaagcatctcatcagaagcaagatcacc 9301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 229 - 281
Target Start/End: Original strand, 14326 - 14378
Alignment:
Q  229 attctgcagcagtgtgtataacattgtgcatgtcactgctattctatctatct 281  Q
    |||||||||| ||||||||||||||||| | ||||||||||||||||||||||    
T  14326 attctgcagcggtgtgtataacattgtgtacgtcactgctattctatctatct 14378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 13979 - 13850
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatg 147  Q
    |||||||||||||||| |||||||| ||||| ||| | |||||||||| | ||||  ||||| ||||| | |||||| |  |||| ||| |||| | |||    
T  13979 gttctggaagaacaaaagagagcaaaggaatcaacgaaaaggaagcttaatgcgtcagaagagaagtgctcctgaagacaaaagtgctcctgaagtaatg 13880  T
Q  148 acgtcatcggaagcaagatcatcagaagca 177  Q
    | |||||| |||||||| ||||||||||||    
T  13879 atgtcatcagaagcaagttcatcagaagca 13850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Complemental strand, 10306 - 10228
Alignment:
Q  50 gttctggaagaacaaatga-gagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||| |||| | |||| ||||||| ||||| ||||||||||||||||| |||||||||||| | |||||||    
T  10306 gttctggaagaaaaaattaagagctatggaataaacaaaaaggaagcttgaagcgtctgaagaaaagtgctcctgaagt 10228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 50 - 176
Target Start/End: Original strand, 5697 - 5823
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgac 149  Q
    |||||||||||||||| |||||| | ||||| ||||| ||||||| ||||||| | |||||||||||| |  |||||| |||| ||  | || | |||||    
T  5697 gttctggaagaacaaaagagagctaaggaatcaacaaaaaggaagtttgaagcatctgaagaaaagtgctcatgaagtgaagtgcttctaaagtaatgac 5796  T
Q  150 gtcatcggaagcaagatcatcagaagc 176  Q
    ||| || |||| ||| |||||||||||    
T  5797 gtcttcagaagtaagttcatcagaagc 5823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 176
Target Start/End: Complemental strand, 1995 - 1870
Alignment:
Q  53 ctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacg 150  Q
    ||||||||||||| |||||||| ||||| || || |||||||||| |||| | || ||| ||||| | |||||| |  || | ||| |||| ||||||||    
T  1995 ctggaagaacaaaagagagcaaaggaatcaataaaaaggaagcttaaagcatctgcagagaagtgctcctgaagactaaaatgctcctgaagtgatgacg 1896  T
Q  151 tcatcggaagcaagatcatcagaagc 176  Q
    ||||| |||||||||||| |||||||    
T  1895 tcatcagaagcaagatcaccagaagc 1870  T

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Target: scaffold0916 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0916
Description:

Target: scaffold0916; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 2342 - 2438
Alignment:
Q  5 tgtggaggagcagagacaaaaatttagtgtctcc--ttaaagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttga 99  Q
    |||| |||| || |||||||||||||||||||    || ||||||| ||||||||||||||||||||||||||| |||  |||| ||| ||||||||    
T  2342 tgtgtaggatcatagacaaaaatttagtgtctttaattcaagcataggttctggaagaacaaatgagagcaatgaaatctacaaaaagtaagcttga 2438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0473 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 176
Target Start/End: Original strand, 2510 - 2598
Alignment:
Q  90 ggaagcttgaagcgtgtgaagaaaagtggttctgaagtc--aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    ||||| || |||||| ||||||||| || ||||||||||  |||| ||| |||| ||||||||||||| |||||||| |||||||||||    
T  2510 ggaagattaaagcgtctgaagaaaactgcttctgaagtctgaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagc 2598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 76 - 162
Target Start/End: Original strand, 60654 - 60740
Alignment:
Q  76 ggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagca 162  Q
    ||||| ||||| ||||||||||||||||| |||||| ||||| | |||||||  ||| ||| |||| ||| ||||||||| ||||||    
T  60654 ggaatcaacaaaaaggaagcttgaagcgtctgaagagaagtgctcctgaagtttagtgctcctgaagtgaggacgtcatcagaagca 60740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 25735 - 25812
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagt 127  Q
    |||||||||||||||| |||||||| ||||| ||||| ||||||| || | |||| |||||| ||||| | |||||||    
T  25735 gttctggaagaacaaaagagagcaaaggaatcaacaaaaaggaagattaaggcgtctgaagagaagtgctcctgaagt 25812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 8057 - 7993
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||||||  |||||||| ||||| ||||| ||| |||||| |||||| |||||||||    
T  8057 gttctggaagaacaatagagagcaaaggaatcaacaaaaagaaagcttaaagcgtctgaagaaaa 7993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 19402 - 19338
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||||||  |||||||| ||||| ||||| |||||||||| |||| | |||||||||    
T  19402 gttctggaagaacaatagagagcaaaggaatcaacaaaaaggaagcttaaagcatctgaagaaaa 19338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 143458 - 143394
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttgaagcgtgtgaagaaaa 114  Q
    |||||||||||||||  |||||||| ||||| || || |||||||||| |||||| |||||||||    
T  143458 gttctggaagaacaatagagagcaaaggaatcaagaaaaaggaagcttaaagcgtctgaagaaaa 143394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 4015 - 4061
Alignment:
Q  49 agttctggaagaacaaatgagagcaatggaattaacaagaaggaagc 95  Q
    ||||||| ||||||||||||| ||||||||||| |||| ||||||||    
T  4015 agttctgaaagaacaaatgagggcaatggaatttacaaaaaggaagc 4061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0522; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 95
Target Start/End: Original strand, 11298 - 11344
Alignment:
Q  49 agttctggaagaacaaatgagagcaatggaattaacaagaaggaagc 95  Q
    ||||||| ||||||||||||| ||||||||||| |||| ||||||||    
T  11298 agttctgaaagaacaaatgagggcaatggaatttacaaaaaggaagc 11344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 98
Target Start/End: Complemental strand, 7686 - 7637
Alignment:
Q  49 agttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| ||||||||||||| ||||| ||||| |||| |||||||||||    
T  7686 agttctgaaagaacaaatgagggcaatagaatttacaaaaaggaagcttg 7637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 10250 - 10193
Alignment:
Q  120 tctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||||||  |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  10250 tctgaagagaagtgctcctgaagtgatgacgtcatcagaagcaagttcatcagaagca 10193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 13304 - 13417
Alignment:
Q  77 gaattaacaagaaggaagcttgaagcgtgtgaagaaaagtggttctgaagtcaagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagc 176  Q
    |||| ||||| || |||||||||||| | |||||| ||||| | ||||| |  ||| ||| |||| |||||| |||||   ||||| | |||||||||||    
T  13304 gaatcaacaaaaaagaagcttgaagcatctgaagagaagtgctcctgaaatttagtgctcctgaagtgatgatgtcattaaaagcatgttcatcagaagc 13403  T
Q  177 atctcattagaagc 190  Q
    ||||||| ||||||    
T  13404 atctcatcagaagc 13417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 79
Target Start/End: Complemental strand, 4778 - 4749
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaa 79  Q
    ||||||||||||||||||||||||||||||    
T  4778 gttctggaagaacaaatgagagcaatggaa 4749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 3606 - 3558
Alignment:
Q  129 aagttctcttgaaatgatgacgtcatcggaagcaagatcatcagaagca 177  Q
    |||| ||| |||| ||||||||||||| |||||||| ||||||||||||    
T  3606 aagtgctcctgaagtgatgacgtcatcagaagcaaggtcatcagaagca 3558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 98
Target Start/End: Complemental strand, 19415 - 19359
Alignment:
Q  42 aagcataagttctggaagaacaaatgagagcaatggaattaacaagaaggaagcttg 98  Q
    ||||||| ||| |||||||||||||||||| ||| ||||  |||| |||||||||||    
T  19415 aagcataggttatggaagaacaaatgagagaaattgaatctacaaaaaggaagcttg 19359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 86
Target Start/End: Original strand, 1666 - 1702
Alignment:
Q  50 gttctggaagaacaaatgagagcaatggaattaacaa 86  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  1666 gttctagaagaacaaatgagagcaatggaatttacaa 1702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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