View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17861_high_64 (Length: 202)
Name: NF17861_high_64
Description: NF17861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17861_high_64 |
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Alignment Details
Target: chr8 (Bit Score: 124; Significance: 5e-64; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 124; E-Value: 5e-64
Query Start/End: Original strand, 61 - 188
Target Start/End: Complemental strand, 41325415 - 41325288
Alignment:
| Q |
61 |
tttacattattcttgtaactttcatctacttgtgctagcctacaagagcatgagatctttattggttaatcatcaaataccatgagacctagcttgatga |
160 |
Q |
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| T |
41325415 |
tttacattattcttgtaactttcatctacttgtgctagcctactagagcatgagatctttattggttaatcatcaaataccatgagacctagcttgatga |
41325316 |
T |
|
| Q |
161 |
caatattatttagtgagttactctgtgc |
188 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
41325315 |
caatattatttagtgagttactctgtgc |
41325288 |
T |
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