View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17861_low_44 (Length: 297)
Name: NF17861_low_44
Description: NF17861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17861_low_44 |
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Alignment Details
Target: chr1 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 48894423 - 48894147
Alignment:
| Q |
1 |
aggtattatagctaagatgaacaatgccggcaatggaaatagtggcaagaaaggaaatccaaatcagaacatggtaatgaaggaagttgctaatgggatt |
100 |
Q |
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| T |
48894423 |
aggtattatagctaagatgaacaatgctggcaatggaaatagtggcaagaaaggaaatccaaatcagaacatggtaatgaaggaaggtgctaatgggatt |
48894324 |
T |
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| Q |
101 |
gatcagaaaacattggcagctatgaagttgaacaatgctcatttggttggtaatgaaagtctcaaccttggagaatccaaaagggctagcgacattggtg |
200 |
Q |
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| T |
48894323 |
gatcagaaaacattggcagctatgaagttgaacaatgctcatttggttggtaatgaaagtctcaaccttggagaatccaaaagggctagcgacattggtg |
48894224 |
T |
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| Q |
201 |
ctatgatgaatttagctggttttaatgggaacaataacaatggtgctggtagtgctactgttgtaggtggaaattcc |
277 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48894223 |
ctatgatgaatttagctggttttaatgggaacaataacaatggtgctggtagtgctactgttgtaggtggaaattcc |
48894147 |
T |
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