View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17861_low_46 (Length: 278)

Name: NF17861_low_46
Description: NF17861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17861_low_46
NF17861_low_46
[»] chr7 (45 HSPs)
chr7 (107-271)||(25483536-25483700)
chr7 (158-278)||(36121427-36121548)
chr7 (158-270)||(3117291-3117403)
chr7 (162-270)||(37658106-37658214)
chr7 (157-270)||(35670345-35670458)
chr7 (162-278)||(40061163-40061280)
chr7 (162-270)||(8932491-8932599)
chr7 (162-270)||(9806580-9806688)
chr7 (162-270)||(30582671-30582779)
chr7 (166-270)||(39870012-39870116)
chr7 (162-270)||(1601971-1602078)
chr7 (160-271)||(30999331-30999445)
chr7 (159-270)||(33982306-33982417)
chr7 (159-270)||(43544887-43544998)
chr7 (158-221)||(6476922-6476985)
chr7 (175-270)||(31619518-31619613)
chr7 (157-248)||(35747020-35747111)
chr7 (162-232)||(25751111-25751181)
chr7 (152-217)||(28494320-28494385)
chr7 (157-270)||(31436238-31436351)
chr7 (158-270)||(31030755-31030867)
chr7 (162-270)||(31969457-31969565)
chr7 (162-226)||(41406188-41406252)
chr7 (162-270)||(43468001-43468109)
chr7 (162-270)||(44104567-44104675)
chr7 (162-221)||(46534408-46534467)
chr7 (162-248)||(596125-596211)
chr7 (151-221)||(46349924-46349994)
chr7 (159-247)||(585904-585992)
chr7 (159-247)||(1602067-1602154)
chr7 (157-217)||(31031938-31031998)
chr7 (162-270)||(44570932-44571040)
chr7 (158-217)||(4060348-4060407)
chr7 (162-217)||(6243867-6243922)
chr7 (158-217)||(14792161-14792220)
chr7 (162-217)||(21920840-21920895)
chr7 (162-217)||(27826709-27826764)
chr7 (165-248)||(33979619-33979702)
chr7 (162-217)||(42329067-42329122)
chr7 (162-217)||(43156568-43156623)
chr7 (159-217)||(28958166-28958224)
chr7 (159-197)||(42825997-42826035)
chr7 (162-248)||(42833737-42833823)
chr7 (163-217)||(48935236-48935290)
chr7 (163-227)||(1602160-1602224)
[»] chr8 (40 HSPs)
chr8 (159-257)||(38760814-38760912)
chr8 (162-270)||(18146342-18146450)
chr8 (162-270)||(45069810-45069918)
chr8 (157-257)||(42353696-42353794)
chr8 (162-270)||(12208806-12208914)
chr8 (162-270)||(12453234-12453342)
chr8 (156-248)||(43150246-43150338)
chr8 (152-248)||(43873948-43874044)
chr8 (162-270)||(45237784-45237892)
chr8 (157-270)||(45236955-45237068)
chr8 (157-248)||(35253043-35253134)
chr8 (159-248)||(31642762-31642851)
chr8 (157-270)||(40532053-40532165)
chr8 (158-221)||(3512467-3512530)
chr8 (162-248)||(43129590-43129676)
chr8 (158-215)||(35160316-35160373)
chr8 (210-270)||(25133258-25133318)
chr8 (166-270)||(29051164-29051268)
chr8 (162-221)||(5838256-5838315)
chr8 (205-248)||(34617705-34617748)
chr8 (161-248)||(38364484-38364571)
chr8 (162-248)||(35019487-35019573)
chr8 (162-227)||(29725741-29725806)
chr8 (205-270)||(41356333-41356398)
chr8 (157-221)||(2773623-2773687)
chr8 (162-270)||(4477610-4477718)
chr8 (157-217)||(20697550-20697610)
chr8 (157-217)||(35057345-35057405)
chr8 (157-217)||(43800813-43800873)
chr8 (158-217)||(22215107-22215166)
chr8 (154-217)||(39733718-39733781)
chr8 (162-221)||(40529501-40529560)
chr8 (162-248)||(39104191-39104277)
chr8 (157-222)||(53509-53574)
chr8 (162-215)||(284818-284871)
chr8 (162-215)||(631006-631059)
chr8 (162-215)||(816818-816871)
chr8 (156-221)||(16786571-16786636)
chr8 (157-217)||(25099408-25099468)
chr8 (158-217)||(38747001-38747061)
[»] chr3 (39 HSPs)
chr3 (158-270)||(32111551-32111663)
chr3 (163-248)||(46114989-46115074)
chr3 (162-278)||(34785860-34785977)
chr3 (159-248)||(43860723-43860812)
chr3 (162-270)||(40374499-40374607)
chr3 (157-267)||(39534935-39535045)
chr3 (156-270)||(40980131-40980245)
chr3 (156-270)||(46668335-46668449)
chr3 (159-248)||(42167345-42167434)
chr3 (159-227)||(50935710-50935778)
chr3 (162-248)||(5505932-5506018)
chr3 (164-270)||(36660127-36660233)
chr3 (159-248)||(2229183-2229272)
chr3 (162-270)||(6586265-6586373)
chr3 (162-270)||(12122872-12122980)
chr3 (166-270)||(36806926-36807030)
chr3 (159-270)||(39129371-39129482)
chr3 (159-270)||(48071973-48072084)
chr3 (162-248)||(7041730-7041816)
chr3 (157-219)||(12764666-12764728)
chr3 (166-248)||(22978083-22978165)
chr3 (162-270)||(48747404-48747512)
chr3 (162-270)||(32390105-32390215)
chr3 (162-248)||(42877240-42877326)
chr3 (162-270)||(32999648-32999756)
chr3 (152-217)||(34436019-34436084)
chr3 (162-227)||(39129300-39129365)
chr3 (162-227)||(41888809-41888874)
chr3 (157-217)||(19274725-19274785)
chr3 (162-217)||(8321475-8321530)
chr3 (162-217)||(9558904-9558959)
chr3 (162-217)||(41991728-41991783)
chr3 (162-221)||(51980732-51980791)
chr3 (162-248)||(41889434-41889520)
chr3 (162-215)||(4070816-4070869)
chr3 (211-248)||(44896079-44896116)
chr3 (156-197)||(45355124-45355165)
chr3 (157-217)||(12055559-12055619)
chr3 (157-217)||(17666797-17666857)
[»] chr2 (37 HSPs)
chr2 (156-270)||(40862195-40862308)
chr2 (159-270)||(38928481-38928592)
chr2 (163-270)||(18109706-18109813)
chr2 (152-270)||(8341146-8341264)
chr2 (162-248)||(33178961-33179047)
chr2 (157-246)||(1086038-1086127)
chr2 (157-270)||(39532057-39532170)
chr2 (162-270)||(14452300-14452408)
chr2 (162-270)||(26340025-26340133)
chr2 (162-270)||(37240949-37241057)
chr2 (162-270)||(44525978-44526086)
chr2 (159-248)||(6322153-6322242)
chr2 (159-248)||(11447237-11447326)
chr2 (165-221)||(5774096-5774152)
chr2 (164-248)||(15265354-15265438)
chr2 (176-248)||(28125019-28125091)
chr2 (154-257)||(7183286-7183389)
chr2 (158-217)||(42519710-42519769)
chr2 (162-217)||(45376909-45376964)
chr2 (162-248)||(36600937-36601023)
chr2 (162-270)||(10247376-10247482)
chr2 (157-270)||(35422038-35422151)
chr2 (163-248)||(38245913-38245998)
chr2 (157-217)||(12160958-12161018)
chr2 (162-218)||(42097955-42098011)
chr2 (161-217)||(43496161-43496217)
chr2 (162-217)||(11018076-11018131)
chr2 (162-217)||(14958120-14958175)
chr2 (162-217)||(30523609-30523664)
chr2 (162-217)||(39241205-39241260)
chr2 (162-227)||(6319537-6319602)
chr2 (162-215)||(24520264-24520317)
chr2 (165-270)||(32482236-32482341)
chr2 (157-217)||(10361388-10361448)
chr2 (157-217)||(16496660-16496720)
chr2 (157-217)||(34245241-34245301)
chr2 (159-227)||(38928598-38928666)
[»] chr1 (38 HSPs)
chr1 (164-270)||(42628209-42628315)
chr1 (162-270)||(31656369-31656477)
chr1 (162-271)||(31496610-31496719)
chr1 (162-270)||(5698126-5698234)
chr1 (157-248)||(44502556-44502647)
chr1 (162-248)||(3795977-3796063)
chr1 (157-270)||(14390417-14390530)
chr1 (164-270)||(4361051-4361157)
chr1 (162-248)||(27667675-27667761)
chr1 (156-270)||(35179814-35179928)
chr1 (157-270)||(9223835-9223948)
chr1 (159-227)||(4640127-4640195)
chr1 (158-217)||(11823580-11823639)
chr1 (162-270)||(38667187-38667299)
chr1 (175-270)||(39325508-39325603)
chr1 (162-248)||(44109945-44110031)
chr1 (166-248)||(44299957-44300039)
chr1 (205-270)||(18545588-18545653)
chr1 (162-270)||(41865287-41865395)
chr1 (162-270)||(5698508-5698615)
chr1 (162-268)||(30899415-30899521)
chr1 (162-218)||(2459689-2459745)
chr1 (162-246)||(23259085-23259169)
chr1 (157-217)||(27747602-27747662)
chr1 (162-217)||(1190187-1190242)
chr1 (162-217)||(30358074-30358129)
chr1 (162-217)||(39325611-39325666)
chr1 (159-270)||(42159609-42159720)
chr1 (162-217)||(45900169-45900224)
chr1 (162-217)||(50586223-50586278)
chr1 (162-248)||(11756885-11756971)
chr1 (159-221)||(38058746-38058808)
chr1 (162-224)||(40640679-40640741)
chr1 (162-248)||(43847442-43847528)
chr1 (164-257)||(34086201-34086294)
chr1 (157-217)||(11332837-11332897)
chr1 (157-217)||(11490858-11490918)
chr1 (157-217)||(38815593-38815653)
[»] chr6 (23 HSPs)
chr6 (157-270)||(18368725-18368838)
chr6 (162-270)||(1789787-1789895)
chr6 (158-270)||(190919-191031)
chr6 (162-270)||(4976524-4976632)
chr6 (162-270)||(18801700-18801808)
chr6 (162-248)||(15508349-15508435)
chr6 (162-248)||(31603925-31604011)
chr6 (159-227)||(32562445-32562513)
chr6 (161-244)||(13866263-13866346)
chr6 (155-217)||(20992309-20992371)
chr6 (162-248)||(24159238-24159324)
chr6 (162-227)||(5090118-5090183)
chr6 (164-221)||(25023495-25023552)
chr6 (157-217)||(24119283-24119343)
chr6 (162-217)||(13756364-13756419)
chr6 (150-217)||(20645646-20645713)
chr6 (162-248)||(1290382-1290468)
chr6 (159-217)||(21860231-21860289)
chr6 (176-270)||(31259539-31259633)
chr6 (157-270)||(5956417-5956530)
chr6 (159-248)||(34574608-34574697)
chr6 (157-217)||(21778130-21778190)
chr6 (157-217)||(22707286-22707346)
[»] chr4 (45 HSPs)
chr4 (162-270)||(30411243-30411351)
chr4 (162-248)||(48368982-48369068)
chr4 (157-270)||(19912668-19912781)
chr4 (157-270)||(55610658-55610771)
chr4 (161-248)||(51924025-51924112)
chr4 (162-248)||(50792429-50792515)
chr4 (162-270)||(202290-202398)
chr4 (162-270)||(26923530-26923638)
chr4 (162-270)||(30653499-30653606)
chr4 (162-270)||(45549653-45549761)
chr4 (157-270)||(2390261-2390374)
chr4 (162-227)||(19869960-19870025)
chr4 (159-248)||(48953027-48953116)
chr4 (162-270)||(10658874-10658982)
chr4 (162-270)||(10873019-10873127)
chr4 (158-270)||(28459608-28459720)
chr4 (164-270)||(1771831-1771937)
chr4 (162-248)||(43590534-43590620)
chr4 (164-270)||(50790826-50790932)
chr4 (205-270)||(318683-318748)
chr4 (162-278)||(7113493-7113614)
chr4 (157-217)||(39840239-39840299)
chr4 (162-249)||(19870985-19871072)
chr4 (205-248)||(31997875-31997918)
chr4 (162-248)||(27531830-27531916)
chr4 (156-217)||(19801907-19801968)
chr4 (162-247)||(20986274-20986359)
chr4 (157-270)||(25686981-25687094)
chr4 (157-197)||(24152671-24152711)
chr4 (157-193)||(30996710-30996746)
chr4 (162-217)||(6238188-6238243)
chr4 (162-217)||(33984088-33984143)
chr4 (164-227)||(49646027-49646090)
chr4 (162-217)||(53284007-53284062)
chr4 (162-220)||(14269864-14269922)
chr4 (163-217)||(37114478-37114532)
chr4 (161-243)||(45618060-45618142)
chr4 (164-226)||(55660548-55660610)
chr4 (162-215)||(28778556-28778609)
chr4 (162-215)||(49335237-49335290)
chr4 (165-222)||(49648859-49648916)
chr4 (157-193)||(318740-318776)
chr4 (157-221)||(30653331-30653395)
chr4 (168-248)||(38005551-38005631)
chr4 (157-217)||(45561360-45561419)
[»] chr5 (35 HSPs)
chr5 (158-248)||(11575618-11575708)
chr5 (162-270)||(13018994-13019102)
chr5 (157-267)||(1923942-1924052)
chr5 (157-270)||(4559471-4559584)
chr5 (205-270)||(7948429-7948494)
chr5 (156-221)||(35766553-35766618)
chr5 (162-270)||(8520567-8520675)
chr5 (158-270)||(20768859-20768971)
chr5 (159-270)||(20017297-20017408)
chr5 (164-218)||(3703454-3703508)
chr5 (159-248)||(15524359-15524448)
chr5 (155-217)||(34589970-34590032)
chr5 (155-217)||(37530789-37530851)
chr5 (159-228)||(3033390-3033459)
chr5 (162-227)||(8520497-8520562)
chr5 (162-270)||(3078532-3078640)
chr5 (162-217)||(5050146-5050201)
chr5 (162-217)||(6789658-6789713)
chr5 (162-217)||(7615046-7615101)
chr5 (162-217)||(15498645-15498700)
chr5 (162-217)||(24171365-24171420)
chr5 (158-221)||(26286177-26286240)
chr5 (162-217)||(29525365-29525420)
chr5 (162-217)||(41734313-41734368)
chr5 (162-217)||(42422807-42422862)
chr5 (162-217)||(42709311-42709366)
chr5 (159-217)||(76411-76469)
chr5 (159-217)||(25881504-25881562)
chr5 (178-227)||(3033335-3033384)
chr5 (164-217)||(16218352-16218405)
chr5 (162-215)||(17645306-17645359)
chr5 (157-214)||(23590634-23590691)
chr5 (157-221)||(36944280-36944344)
chr5 (157-197)||(36959461-36959501)
chr5 (204-248)||(41356263-41356307)
[»] scaffold0115 (2 HSPs)
scaffold0115 (157-270)||(4144-4257)
scaffold0115 (157-270)||(11884-11997)
[»] scaffold0009 (1 HSPs)
scaffold0009 (164-270)||(94395-94501)
[»] scaffold0076 (1 HSPs)
scaffold0076 (157-217)||(14235-14295)
[»] scaffold0060 (1 HSPs)
scaffold0060 (162-217)||(57893-57948)
[»] scaffold0007 (1 HSPs)
scaffold0007 (158-217)||(157659-157718)
[»] scaffold0039 (1 HSPs)
scaffold0039 (162-270)||(76244-76352)


Alignment Details
Target: chr7 (Bit Score: 94; Significance: 6e-46; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 107 - 271
Target Start/End: Original strand, 25483536 - 25483700
Alignment:
Q  107 cataccgttctatatttaaatttacgttaaatatgttttgacctt-acacataggttgtgtttggtaatacaaataagctagtttatagcttattctatt 205  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| | ||||||||||||| || ||||||||||||| | |||||||||| ||||    
T  25483536 cataccgttgtatatttaaatttacgttaaatatgttttgacctttacatagaggttgtgtttggaaacacaaataagctagctaatagcttattgtatt 25483635  T
Q  206 agcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagcttatat 271  Q
    ||||||||| ||| |||||||||||| ||| ||||||||||||  | |||||||||||||||||||    
T  25483636 agcttataaacttattttgataggat-tgacgtgtttggtaaaaagtttttcacattagcttatat 25483700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 158 - 278
Target Start/End: Original strand, 36121427 - 36121548
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    |||||||||||||||| ||||| ||| ||| ||||||||||||  |||||||||||||||||||||||||| ||  ||||||||||||||| || |||||    
T  36121427 aggttgtgtttggtaacacaaagaagatagcttatagcttattggattagcttataagcttgttttgatagaataagatgtgtttggtaaaacgattttc 36121526  T
Q  258 acattagcttata-tgtttttt 278  Q
     || ||||||||| ||||||||    
T  36121527 tcaatagcttatagtgtttttt 36121548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 3117403 - 3117291
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    |||||||||||||||| | ||||||| ||| |||||| ||||| ||||||||||||||||||||||||||||||| || ||||||| ||||  | ||||     
T  3117403 aggttgtgtttggtaacaaaaataagttagcttatagtttattatattagcttataagcttgttttgataggatgagacgtgtttgataaaaagtttttt 3117304  T
Q  258 acattagcttata 270  Q
    ||||||| |||||    
T  3117303 acattagtttata 3117291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 37658214 - 37658106
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||     
T  37658214 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 37658115  T
Q  262 tagcttata 270  Q
    |||||||||    
T  37658114 tagcttata 37658106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 35670458 - 35670345
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||   |||||    
T  35670458 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaaactttt 35670359  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  35670358 ctcactagcttata 35670345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 278
Target Start/End: Original strand, 40061163 - 40061280
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||||||||||| |||  ||| |||||||||||||||  ||||||| ||     
T  40061163 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaaaagcttttctcac 40061262  T
Q  262 tagcttata-tgtttttt 278  Q
    ||||||||| ||||||||    
T  40061263 tagcttatagtgtttttt 40061280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 8932599 - 8932491
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||||||  ||||||||| ||| ||  | |||||||||||||||||||||||| ||| |||||||||||||||  ||||||| ||     
T  8932599 tgtgtttggtaacacaaataaattagtttataacttgttggactagcttataagcttgttttgatagaatgagatgtgtttggtaaaaagcttttctcac 8932500  T
Q  262 tagcttata 270  Q
    || ||||||    
T  8932499 taacttata 8932491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 9806688 - 9806580
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| | ||| ||| ||||||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||     
T  9806688 tgtgtttggtaacataaaaaagttagtttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 9806589  T
Q  262 tagcttata 270  Q
    |||||||||    
T  9806588 tagcttata 9806580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 30582671 - 30582779
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  |||  ||||||||||||||  ||||||| ||     
T  30582671 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgatatgtgtttggtaaaaagcttttctcac 30582770  T
Q  262 tagcttata 270  Q
    |||||||||    
T  30582771 tagcttata 30582779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 39870116 - 39870012
Alignment:
Q  166 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagc 265  Q
    |||||||| ||||| ||||||| |||||| || ||  |||||||||||||||||||||||||  ||| |||||||||||||||  ||||||| || ||||    
T  39870116 tttggtaacacaaaaaagctagcttatagtttgttggattagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcactagc 39870017  T
Q  266 ttata 270  Q
    |||||    
T  39870016 ttata 39870012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 1602078 - 1601971
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| | ||| ||||||| ||||||||| ||  | ||||||||||||| |||||||||| ||| |||||||||||||||  ||||||| ||     
T  1602078 tgtgtttggtaacataaa-aagctagcttatagcttgttggactagcttataagctagttttgatagaatgagatgtgtttggtaaaaagcttttctcac 1601980  T
Q  262 tagcttata 270  Q
    |||||||||    
T  1601979 tagcttata 1601971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 160 - 271
Target Start/End: Complemental strand, 30999445 - 30999331
Alignment:
Q  160 gttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgat---aggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||||||||||||| ||||||||| ||||||||||||||||  | ||||| ||||||||||||||||   |  ||  |||||||||||||||  ||||||    
T  30999445 gttgtgtttggtaacacaaataagttagtttatagcttattggactagctcataagcttgttttgataaaataataagatgtgtttggtaaaaagctttt 30999346  T
Q  257 cacattagcttatat 271  Q
    | || ||||||||||    
T  30999345 ctcactagcttatat 30999331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 33982417 - 33982306
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttca 258  Q
    ||||||||||||| | || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||  ||||||      
T  33982417 ggttgtgtttggtgacacgaataagctagcttatagcttgttagactagcttataagcttgttttgatataataagatgtgtttggtaaaaagctttttt 33982318  T
Q  259 cattagcttata 270  Q
    || |||||||||    
T  33982317 cactagcttata 33982306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 43544998 - 43544887
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttca 258  Q
    ||||||||||||||| || |||||||||  ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||  ||||||      
T  43544998 ggttgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagctttttt 43544899  T
Q  259 cattagcttata 270  Q
    || |||||||||    
T  43544898 cactagcttata 43544887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 6476922 - 6476985
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  6476922 aggttgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 6476985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 270
Target Start/End: Original strand, 31619518 - 31619613
Alignment:
Q  175 acaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagcttata 270  Q
    ||||| ||||||||||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||  ||||||  || |||||||||    
T  31619518 acaaaaaagctagtttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttatcactagcttata 31619613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 35747020 - 35747111
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||| |  || ||||||| |||||||||||| ||| ||||| |||||||||    
T  35747020 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttcgacaagtttataagattgttttgatagaatgagatgtatttggtaaa 35747111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 232
Target Start/End: Original strand, 25751111 - 25751181
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatg 232  Q
    |||||||||||| |||||||||||||||||||  |||||  | || |||| ||||||||||||||||||||    
T  25751111 tgtgtttggtaacacaaataagctagtttataatttattggactaccttacaagcttgttttgataggatg 25751181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 28494385 - 28494320
Alignment:
Q  152 acacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  28494385 acacataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 28494320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 31436351 - 31436238
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||||||||||| |||| ||||| ||||||| ||||||||| ||  | || ||||||| ||||||||||||  |||  ||||||||||||||  | ||||    
T  31436351 taggttgtgtttcgtaacacaaaaaagctagcttatagcttgttggactaacttataaacttgttttgataaaatgaaatgtgtttggtaaaaagttttt 31436252  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  31436251 ctcactagcttata 31436238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 31030867 - 31030755
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    ||||| |||||||||| | ||| |||||| ||||||| || ||  | |||||||||||||||||||||||  ||  |||||||||||||||  | |||||    
T  31030867 aggttatgtttggtaacataaaaaagctaatttatagtttgttggactagcttataagcttgttttgataaaataagatgtgtttggtaaaaagtttttc 31030768  T
Q  258 acattagcttata 270  Q
     || |||||||||    
T  31030767 tcactagcttata 31030755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 31969565 - 31969457
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||| ||| |||||| || ||  | || ||||||||||||||||||||  |||  ||||||||||||||  ||||||| ||     
T  31969565 tgtgtttggtaacacaaaaaagttagcttatagattgttggactaacttataagcttgttttgataaaatgaaatgtgtttggtaaaaagcttttctcac 31969466  T
Q  262 tagcttata 270  Q
    |||||||||    
T  31969465 tagcttata 31969457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 41406188 - 41406252
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgat 226  Q
    |||||||||||| || |||||||||| ||||||||||||  | || |||||||||||||||||||    
T  41406188 tgtgtttggtaacacgaataagctagcttatagcttattggactatcttataagcttgttttgat 41406252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 43468109 - 43468001
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    ||||||||||||   ||| ||||||| |||||| || ||  | | ||||||||| |||||||||||  ||| |||||||||||||||  ||||||| |||    
T  43468109 tgtgtttggtaaccgaaaaaagctagcttatagtttgttggactggcttataagtttgttttgataaaatgagatgtgtttggtaaaaagcttttctcat 43468010  T
Q  262 tagcttata 270  Q
    |||||||||    
T  43468009 tagcttata 43468001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 44104675 - 44104567
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| | ||| ||||||| |||||| || ||  |  | ||||||||||||| ||||||| ||| |||||||||||||||  ||||||  |||    
T  44104675 tgtgtttggtaacaaaaaaaagctagcttatagtttgttggacaaacttataagcttgtcttgatagaatgagatgtgtttggtaaaaagcttttttcat 44104576  T
Q  262 tagcttata 270  Q
    |||||||||    
T  44104575 tagcttata 44104567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 46534408 - 46534467
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  46534408 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgtt 46534467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 596211 - 596125
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || ||||||||||  |||| ||| ||  | |||||||||||||||||||||||  || | ||||||||||||||    
T  596211 tgtgtttggtaacacgaataagctaggatataacttgttggactagcttataagcttgttttgatataatataatgtgtttggtaaa 596125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 221
Target Start/End: Complemental strand, 46349994 - 46349924
Alignment:
Q  151 tacacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||| ||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||| ||||||||||||||    
T  46349994 tacatataggctgtgtttggtaacacaaaaaagctagcttatagcttcttggattaacttataagcttgtt 46349924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 585992 - 585904
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaa 247  Q
    |||||||||| |||| || |||||||||  ||||||||| ||  | |||||||||||||| ||||||||  ||  ||||||||||||||    
T  585992 ggttgtgtttagtaacacgaataagctaacttatagcttgttggactagcttataagcttattttgataaaataagatgtgtttggtaa 585904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 1602154 - 1602067
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaa 247  Q
    ||||||||||| ||| | ||| ||||||  ||||||||| ||  | ||||||||||||| |||||||||| ||| ||||||||||||||    
T  1602154 ggttgtgtttgataacataaa-aagctaacttatagcttgttggactagcttataagctagttttgatagaatgagatgtgtttggtaa 1602067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 31031998 - 31031938
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||||||||||||| ||  |||| ||||||||||    
T  31031998 taggctgtgtttggtaacacaaaaaagctagtttatagcttgttggattaacttataagct 31031938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 44570932 - 44571040
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||| ||| ||||||||||||  | ||||||||||||| |||||  ||| |||  | ||||||||||||   ||||||  ||    
T  44570932 tgtgtttggtaacacaaaaaagttagcttatagcttattggactagcttataagctagtttttgtagaatgaaacgtgtttggtaaaaaacttttcttat 44571031  T
Q  262 tagcttata 270  Q
    |||||||||    
T  44571032 tagcttata 44571040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 4060348 - 4060407
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||||||| ||||| ||||||| |||||| || ||  |||||||||||||||    
T  4060348 aggttgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagct 4060407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 6243867 - 6243922
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||  ||||||||||||||||| ||  |||||||||||||||    
T  6243867 tgtgtttggtaacacaacaaagctagtttatagcttgttggattagcttataagct 6243922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 14792220 - 14792161
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||| |||||||| ||||||||| ||| ||||||||| ||  |||||||||||||||    
T  14792220 aggttgtatttggtaacacaaataagttagcttatagcttgttagattagcttataagct 14792161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 21920895 - 21920840
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||||||||||| ||||||||| ||  | |||||||||||||    
T  21920895 tgtgtttggtaacacaaataagctagcttatagcttgttggactagcttataagct 21920840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 27826709 - 27826764
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  27826709 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 27826764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 248
Target Start/End: Original strand, 33979619 - 33979702
Alignment:
Q  165 gtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||| || |||||||||| ||||||||| ||  | || ||||||||| ||||||||||  ||  |||||||||||||||    
T  33979619 gtttggtaacacgaataagctagcttatagcttgttggactaccttataagcatgttttgatataataagatgtgtttggtaaa 33979702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 42329122 - 42329067
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  42329122 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 42329067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 43156568 - 43156623
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  43156568 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 43156623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 28958224 - 28958166
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||||||||| ||||| ||||||| ||||||||| ||  |||| ||||||||||    
T  28958224 ggttgtgtttggtaacacaaaaaagctagcttatagcttgttggattaacttataagct 28958166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 197
Target Start/End: Original strand, 42825997 - 42826035
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagctt 197  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  42825997 ggttgtgtttggtaacacaaataagttagtttatagctt 42826035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 42833823 - 42833737
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||||| ||||||||   ||||||||| ||  | ||||| |||||||||||||||||  ||  |||||||||| ||||    
T  42833823 tgtgtttggtaatacgaataagctgacttatagcttgttggactagctgataagcttgttttgatataataagatgtgtttgataaa 42833737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 48935236 - 48935290
Alignment:
Q  163 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||||| ||||||||||||| ||||||||| ||  ||||| |||||||||    
T  48935236 gtgtttggtaacacaaataagctagcttatagcttgttggattagtttataagct 48935290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 163 - 227
Target Start/End: Complemental strand, 1602224 - 1602160
Alignment:
Q  163 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    ||||||| ||| || |||||| ||| ||||||||| ||  | |||||||||||||||||||||||    
T  1602224 gtgtttgataacacgaataagatagcttatagcttgttggactagcttataagcttgttttgata 1602160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 2e-27; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 159 - 257
Target Start/End: Complemental strand, 38760912 - 38760814
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    |||||||||||||||||||||||| |||||||||||||| ||  | |||||||||||||||||||||||| ||| |||||||||||||||  |||||||    
T  38760912 ggttgtgtttggtaatacaaataaactagtttatagcttgttggactagcttataagcttgttttgatagaatgagatgtgtttggtaaaaagcttttc 38760814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 18146342 - 18146450
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||     
T  18146342 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 18146441  T
Q  262 tagcttata 270  Q
    |||||||||    
T  18146442 tagcttata 18146450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 45069918 - 45069810
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||     
T  45069918 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 45069819  T
Q  262 tagcttata 270  Q
    |||||||||    
T  45069818 tagcttata 45069810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 257
Target Start/End: Complemental strand, 42353794 - 42353696
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    ||||||||||||||||||||||| ||| |||||||||| || ||  ||||||||||||| |||||||||||| |  ||||||||||||||||  ||||||    
T  42353794 taggttgtgtttggtaatacaaaaaagttagtttatagtttgttggattagcttataagtttgttttgatagaa--tgatgtgtttggtaaaaagctttt 42353697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 12208806 - 12208914
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||  ||||||| ||     
T  12208806 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcac 12208905  T
Q  262 tagcttata 270  Q
    |||||||||    
T  12208906 tagcttata 12208914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 12453234 - 12453342
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||  ||||||| ||     
T  12453234 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcac 12453333  T
Q  262 tagcttata 270  Q
    |||||||||    
T  12453334 tagcttata 12453342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 156 - 248
Target Start/End: Original strand, 43150246 - 43150338
Alignment:
Q  156 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  43150246 ataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 43150338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 248
Target Start/End: Original strand, 43873948 - 43874044
Alignment:
Q  152 acacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||| |||| |||||||||||  ||||| ||||||||||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  43873948 acacttaggctgtgtttggtaccacaaaaaagctagtttatagcttgttgaactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 43874044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 45237892 - 45237784
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |  ||||||||||||||| ||||||| ||| |||||||||||||||  ||||||  |||    
T  45237892 tgtgtttggtaacacaaaaaagctagcttatagcttgttgaacaagcttataagcttgtcttgatagaatgagatgtgtttggtaaaaagcttttttcat 45237793  T
Q  262 tagcttata 270  Q
    |||||||||    
T  45237792 tagcttata 45237784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 45237068 - 45236955
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    ||||||||||||| ||| ||||| ||||||| ||||| ||| || || ||||||||| | |||||||||||| ||| ||  |||||||||||  ||||||    
T  45237068 taggttgtgtttgataacacaaaaaagctagcttataactttttgtactagcttataggtttgttttgatagaatgagacatgtttggtaaaaagctttt 45236969  T
Q  257 cacattagcttata 270  Q
    | ||||||||||||    
T  45236968 ctcattagcttata 45236955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 248
Target Start/End: Complemental strand, 35253134 - 35253043
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||||||| ||||| ||||||| |||||| ||  |  |  ||||||||||||||||||||||| ||| |||||||||||||||    
T  35253134 taggttgtgtttggtaacacaaacaagctagcttatagtttgctggacaagcttataagcttgttttgatagaatgcgatgtgtttggtaaa 35253043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 31642851 - 31642762
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | ||| |||||||||||||||||||  ||  |||||||||||||||    
T  31642851 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagattataagcttgttttgatacaataagatgtgtttggtaaa 31642762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 40532053 - 40532165
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||| |||||| |||||  | || ||||||||||||||||||||  ||| |||||||| ||||||  ||||||    
T  40532053 taggctgtgtttggtaacacaaa-aagctagcttatagtttattggactaacttataagcttgttttgataaaatgagatgtgttcggtaaaaagctttt 40532151  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  40532152 ctcactagcttata 40532165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 221
Target Start/End: Original strand, 3512467 - 3512530
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  3512467 aggttgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 3512530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 43129590 - 43129676
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || |||||||||||||||||||| ||  | |||||||||| ||||||||||||  ||  |||||||| ||||||    
T  43129590 tgtgtttggtaacacgaataagctagtttatagcttgttggactagcttataaccttgttttgatataataagatgtgttcggtaaa 43129676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 215
Target Start/End: Complemental strand, 35160373 - 35160316
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 215  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||  |||||||||||||    
T  35160373 aggttgtgtttggtaacacaaaaaagctagcttatagcttattggattagcttataag 35160316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 270
Target Start/End: Original strand, 25133258 - 25133318
Alignment:
Q  210 tataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagcttata 270  Q
    ||||||||||||||||||| |||||||||||||||||||  | ||||| || |||||||||    
T  25133258 tataagcttgttttgatagaatgtgatgtgtttggtaaaaagtttttctcactagcttata 25133318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 270
Target Start/End: Complemental strand, 29051268 - 29051164
Alignment:
Q  166 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagc 265  Q
    |||||||| ||| |||| |||| |||||| || ||  | || || |||||||||||||||||| |||||||||||||||||||  ||||||| || || |    
T  29051268 tttggtaacacagataaactagcttatagtttgttggactaactcataagcttgttttgatagaatgtgatgtgtttggtaaaaagcttttctcactaac 29051169  T
Q  266 ttata 270  Q
    |||||    
T  29051168 ttata 29051164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 5838256 - 5838315
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||||||||||||||||| ||||||  ||||||||| ||  |||||||||||||||||||    
T  5838256 tgtgtttggtaatacaaaaaagctaacttatagcttgttggattagcttataagcttgtt 5838315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 34617705 - 34617748
Alignment:
Q  205 tagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||||||||||||||| ||| |||||||||||||||    
T  34617705 tagcttataagcttgttttgatagaatgagatgtgtttggtaaa 34617748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 248
Target Start/End: Complemental strand, 38364571 - 38364484
Alignment:
Q  161 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||| || ||||| |||| ||||||||| ||  | ||| |||||||||||||||||||  ||  |||||||||||||||    
T  38364571 ttgtgtttggtaacacgaataaactagcttatagcttgttggactagtttataagcttgttttgatataataagatgtgtttggtaaa 38364484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 35019487 - 35019573
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||| | ||| ||||||||| ||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  35019487 tgtgttagataacacaaataagatagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 35019573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 29725741 - 29725806
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    ||||||| |||||||  ||||||||| ||||||||| ||  | |||||||||||||||||||||||    
T  29725741 tgtgtttcgtaatacggataagctagcttatagcttgttggactagcttataagcttgttttgata 29725806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 205 - 270
Target Start/End: Original strand, 41356333 - 41356398
Alignment:
Q  205 tagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagcttata 270  Q
    |||||||||||||||||||||||  ||| ||||||||||||||   ||||||| |||| |||||||    
T  41356333 tagcttataagcttgttttgataaaatgagatgtgtttggtaacaagcttttctcattggcttata 41356398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 2773687 - 2773623
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||    
T  2773687 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtt 2773623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 4477718 - 4477610
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||| ||| ||||||||| ||  | ||| ||||||| |||||||||||  |||  ||||||||| ||||  ||||||| ||     
T  4477718 tgtgtttggtaacacaaaaaagttagcttatagcttgttggactagattataagtttgttttgataaaatgaaatgtgtttgataaaaagcttttctcac 4477619  T
Q  262 tagcttata 270  Q
    |||||||||    
T  4477618 tagcttata 4477610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 20697610 - 20697550
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||||||||| ||| ||| ||||||||| ||  |||||||||||||||    
T  20697610 taggctgtgtttggtaatacaaaaaagttagcttatagcttgttggattagcttataagct 20697550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 35057405 - 35057345
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||||||||||| | ||||||| ||| ||||||||| ||  |||||||||||||||    
T  35057405 taggttgtgtttggtaacataaataagatagcttatagcttgttagattagcttataagct 35057345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 43800873 - 43800813
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  43800873 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 43800813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 22215107 - 22215166
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||||||| ||||| ||| ||| ||||||||| ||  |||||||||||||||    
T  22215107 aggttgtgtttggtaacacaaaaaagttagcttatagcttgttggattagcttataagct 22215166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 39733718 - 39733781
Alignment:
Q  154 acataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||| |||||||||||| ||||| ||||||| ||||| ||| ||  |||||||||||||||    
T  39733718 acataggctgtgtttggtaacacaaaaaagctagcttataccttgttggattagcttataagct 39733781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 40529501 - 40529560
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||||||||||| ||||| ||||||| ||||||||| ||   ||||||||||||||||||    
T  40529501 tgtgtttggtaacacaaaaaagctagcttatagcttgtttgtttagcttataagcttgtt 40529560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 39104277 - 39104191
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| ||||  ||||||| |||||  || ||  | ||||||||||||||||||| |||  ||| |||||||||||||||    
T  39104277 tgtgtttggtaacacaagaaagctagcttataatttgttggactagcttataagcttgtttttataaaatgagatgtgtttggtaaa 39104191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 222
Target Start/End: Complemental strand, 53574 - 53509
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttt 222  Q
    |||| ||||||| |||| ||||||||||||| ||||||||| ||  |||| |||||||| ||||||    
T  53574 taggctgtgttttgtaacacaaataagctagcttatagctttttgaattaacttataagtttgttt 53509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 284818 - 284871
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 215  Q
    |||||||||||| ||||| ||| ||||||||||||| ||  |||||||||||||    
T  284818 tgtgtttggtaacacaaaaaagttagtttatagcttgttggattagcttataag 284871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 631059 - 631006
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 215  Q
    |||||||||||| ||||| ||| ||||||||||||| ||  |||||||||||||    
T  631059 tgtgtttggtaacacaaaaaagttagtttatagcttgttggattagcttataag 631006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 816871 - 816818
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 215  Q
    |||||||||||| ||||| ||| ||||||||||||| ||  |||||||||||||    
T  816871 tgtgtttggtaacacaaaaaagttagtttatagcttgttggattagcttataag 816818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 16786636 - 16786571
Alignment:
Q  156 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    ||||| ||||||||| || ||||| ||||||  ||||||||| ||  |||||||||||||||||||    
T  16786636 ataggctgtgtttggcaacacaaaaaagctaacttatagcttcttggattagcttataagcttgtt 16786571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 25099408 - 25099468
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||| ||| ||  |||||||||||||||    
T  25099408 taggctgtgtttggtaacacaaaaaagctagcttataacttgttggattagcttataagct 25099468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 38747061 - 38747001
Alignment:
Q  158 aggttgtgtttggtaatacaaataa-gctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||||||| ||||| || ||||| ||||||||| ||  |||||||||||||||    
T  38747061 aggttgtgtttggtaacacaaaaaaagctagcttatagcttgttggattagcttataagct 38747001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 7e-24; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 32111663 - 32111551
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  |||||||    
T  32111663 aggttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttc 32111564  T
Q  258 acattagcttata 270  Q
     || |||||||||    
T  32111563 tcactagcttata 32111551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 46114989 - 46115074
Alignment:
Q  163 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||| ||||||||||||| ||||||||| ||  |||||||||||||||||||||||||| || | ||||||||||||||    
T  46114989 gtgtttggtaacacaaataagctagcttatagcttgttggattagcttataagcttgttttgatagaatataatgtgtttggtaaa 46115074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 278
Target Start/End: Complemental strand, 34785977 - 34785860
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||| ||||||||| ||||||||||||  | |||||||||||||||||||||||| ||  || ||||||||||||  ||||||| ||     
T  34785977 tgtgtttggtaacacacataagctagcttatagcttattggactagcttataagcttgttttgatagaataagacgtgtttggtaaatagcttttctcac 34785878  T
Q  262 tagcttat-atgtttttt 278  Q
    || ||||| |||||||||    
T  34785877 taacttataatgtttttt 34785860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 43860723 - 43860812
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||||||||| |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  43860723 ggttgtgtttggtaatacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 43860812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 40374607 - 40374499
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||  ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||     
T  40374607 tgtgtttggtaacacaaaaaagctaacttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 40374508  T
Q  262 tagcttata 270  Q
    |||||||||    
T  40374507 tagcttata 40374499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 267
Target Start/End: Complemental strand, 39535045 - 39534935
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| | ||||||||||| || |||||||||  |  ||||||||||||| ||||||||| ||| |||||||||||||||  ||||||    
T  39535045 taggctgtgtttggtaacagaaataagctagcttgtagcttattggacaagcttataagctttttttgatagaatgagatgtgtttggtaaaaagctttt 39534946  T
Q  257 cacattagctt 267  Q
      |||||||||    
T  39534945 ttcattagctt 39534935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 40980245 - 40980131
Alignment:
Q  156 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttt 255  Q
    |||||||||||||||||| ||||| || |||| |||||| || ||  | |||||||||| ||||||||||||  ||| |||||||||||||||  |||||    
T  40980245 ataggttgtgtttggtaacacaaaaaaactagcttatagtttgttgaactagcttataaacttgttttgataaaatgagatgtgtttggtaaaaagcttt 40980146  T
Q  256 tcacattagcttata 270  Q
    || || |||||||||    
T  40980145 tctcactagcttata 40980131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 46668335 - 46668449
Alignment:
Q  156 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttt 255  Q
    ||||| |||||||||||| | ||| ||||||| ||||||||| ||  | || ||||||||||||||||||||  ||  |||||||||||||||  |||||    
T  46668335 ataggctgtgtttggtaacataaaaaagctagcttatagcttgttggactaacttataagcttgttttgataaaataagatgtgtttggtaaaaagcttt 46668434  T
Q  256 tcacattagcttata 270  Q
    ||||| |||||||||    
T  46668435 tcacactagcttata 46668449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 42167434 - 42167345
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  42167434 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 42167345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 227
Target Start/End: Original strand, 50935710 - 50935778
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    ||||||||||||||| || |||||||||| ||||||||||||  | |||||||||||||||||||||||    
T  50935710 ggttgtgtttggtaacacgaataagctagcttatagcttattggactagcttataagcttgttttgata 50935778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 5505932 - 5506018
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| ||||| ||||||| ||||| ||| ||  | ||||||||||| |||||||||||| ||| |||||||||||||||    
T  5505932 tgtgtttggtaacacaaaaaagctagcttataacttgttggactagcttataagtttgttttgatagaatgagatgtgtttggtaaa 5506018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 36660233 - 36660127
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacatta 263  Q
    |||||||||| ||||| ||||||| |||||| || ||  |||||||||||||||||||||||||  ||| ||  |||||||||||  ||||||| || ||    
T  36660233 tgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagcttgttttgataaaatgagacttgtttggtaaaaagcttttctcacta 36660134  T
Q  264 gcttata 270  Q
    |||||||    
T  36660133 gcttata 36660127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 2229272 - 2229183
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||||| || ||||| |||||||||||||||||  | || ||||||| |||||||||||| |||  | |||||||||||||    
T  2229272 ggttgtgtttggtaacacgaataatctagtttatagcttattggactatcttataaccttgttttgatatgataaggtgtgtttggtaaa 2229183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 6586265 - 6586373
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| | ||| ||| |||||||||| || ||  | |||||||||||||||||||||||  |||  ||||||||||||||  ||||||| ||     
T  6586265 tgtgtttggtaacataaaaaagttagtttatagtttgttggactagcttataagcttgttttgataaaatgatatgtgtttggtaaaaagcttttctcac 6586364  T
Q  262 tagcttata 270  Q
    |||||||||    
T  6586365 tagcttata 6586373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 12122980 - 12122872
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||  ||| ||| || ||||||||||||   |||||  |||    
T  12122980 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgtttttgtagaatgagacgtgtttggtaaaaaacttttttcat 12122881  T
Q  262 tagcttata 270  Q
    |||||||||    
T  12122880 tagcttata 12122872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 166 - 270
Target Start/End: Original strand, 36806926 - 36807030
Alignment:
Q  166 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagc 265  Q
    |||||||| ||||| |||||||||| |||||| ||  | |||||||||||||||||||||||  ||| |||||||||| ||||  ||||||| || | ||    
T  36806926 tttggtaacacaaaaaagctagtttttagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttgataaaaagcttttctcactggc 36807025  T
Q  266 ttata 270  Q
    |||||    
T  36807026 ttata 36807030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 39129371 - 39129482
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttca 258  Q
    ||||||||||||||| | ||| ||||||| ||||||||| ||  | || |||||||||| |||||||||| ||| ||| |||||||||||  || ||||     
T  39129371 ggttgtgtttggtaacataaaaaagctagcttatagcttgttggactatcttataagctagttttgatagaatgagatatgtttggtaaaaagcgtttct 39129470  T
Q  259 cattagcttata 270  Q
    || |||||||||    
T  39129471 cactagcttata 39129482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 48071973 - 48072084
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttca 258  Q
    ||||||||||| ||| || ||||| |||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||  ||||||      
T  48071973 ggttgtgtttgttaacacgaataaactagcttatagcttgttggactagcttataagcttgttttgatacaataagatgtgtttggtaaaaagctttttc 48072072  T
Q  259 cattagcttata 270  Q
    || |||||||||    
T  48072073 cactagcttata 48072084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 7041730 - 7041816
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| |  |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  7041730 tgtgtttggtaacaagaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 7041816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 219
Target Start/End: Original strand, 12764666 - 12764728
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttg 219  Q
    |||| |||||||||||| ||||| ||||||||||||||||| ||  |||||||||||||||||    
T  12764666 taggctgtgtttggtaacacaaaaaagctagtttatagctttttggattagcttataagcttg 12764728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 248
Target Start/End: Original strand, 22978083 - 22978165
Alignment:
Q  166 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  22978083 tttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 22978165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 48747404 - 48747512
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||| ||| |||||| |||||  | |||||||||||||||||||  ||| ||| || ||||||||||||   |||||  |||    
T  48747404 tgtgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagcttgtttttgtagaatgagacgtgtttggtaaaaaacttttttcat 48747503  T
Q  262 tagcttata 270  Q
    |||||||||    
T  48747504 tagcttata 48747512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 32390215 - 32390105
Alignment:
Q  162 tgtgtttggtaa--tacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcac 259  Q
    ||||||||||||  || ||| ||| ||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  | ||||| |    
T  32390215 tgtgtttggtaacataaaaaaaagttagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagtttttctc 32390116  T
Q  260 attagcttata 270  Q
    | |||||||||    
T  32390115 actagcttata 32390105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 42877240 - 42877326
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || |||||||||| ||||||||| ||  | |||||||||||| ||||||||||  ||  |||||||| ||||||    
T  42877240 tgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataagcatgttttgatataataagatgtgttaggtaaa 42877326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 32999756 - 32999648
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgat-aggatgtgatgtgtttggtaaagcgcttttcaca 260  Q
    |||||||| ||| ||||| ||||||| ||||||||| ||  ||||||||||||||||| || ||| |  | |||||||||||||||| | ||||||| ||    
T  32999756 tgtgtttgataacacaaaaaagctagcttatagcttcttggattagcttataagcttg-ttggatgaaaacgtgatgtgtttggtaacgagcttttctca 32999658  T
Q  261 ttagcttata 270  Q
    | ||||||||    
T  32999657 tgagcttata 32999648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 34436084 - 34436019
Alignment:
Q  152 acacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  34436084 acacttagggtgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 34436019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 39129300 - 39129365
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    ||||| |||||| || ||||||||||| |||||||| ||  | |||||||||||||||||||||||    
T  39129300 tgtgtgtggtaacacgaataagctagtctatagcttgttggactagcttataagcttgttttgata 39129365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 41888809 - 41888874
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    |||||||||||| || |||||||||| |||||| || ||  | |||||||||||||||||||||||    
T  41888809 tgtgtttggtaacacgaataagctagcttatagtttgttggactagcttataagcttgttttgata 41888874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 19274725 - 19274785
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  19274725 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 19274785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 8321530 - 8321475
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  8321530 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 8321475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 9558959 - 9558904
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| | ||||||||||| ||||||||| ||  |||||||||||||||    
T  9558959 tgtgtttggtaacataaataagctagcttatagcttgttagattagcttataagct 9558904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 41991783 - 41991728
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  41991783 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 41991728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 51980732 - 51980791
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||||||||||| ||||| ||| ||||||||||||| ||  | |||||||||||||||||    
T  51980732 tgtgtttggtaacacaaaaaagttagtttatagcttgttggactagcttataagcttgtt 51980791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 41889520 - 41889434
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || ||||| |||| ||||||||| ||  | ||| |||||||||||||||||||  ||  ||||| |||||||||    
T  41889520 tgtgtttggtaacacgaataaactagcttatagcttgttggactagtttataagcttgttttgatataataagatgtatttggtaaa 41889434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 4070816 - 4070869
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 215  Q
    |||||||||||| |||||||||||||||||||| || ||  | |||||||||||    
T  4070816 tgtgtttggtaacacaaataagctagtttatagtttgttgaactagcttataag 4070869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 248
Target Start/End: Complemental strand, 44896116 - 44896079
Alignment:
Q  211 ataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  44896116 ataagcttgttttgatagaatgagatgtgtttggtaaa 44896079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 197
Target Start/End: Original strand, 45355124 - 45355165
Alignment:
Q  156 ataggttgtgtttggtaatacaaataagctagtttatagctt 197  Q
    ||||| |||||||||||| ||||| |||||||||||||||||    
T  45355124 ataggctgtgtttggtaacacaaaaaagctagtttatagctt 45355165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 12055619 - 12055559
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| |||||| || ||  |||||||||||||||    
T  12055619 taggctgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagct 12055559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 17666797 - 17666857
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| ||||||||||||  |||| ||||||| ||||||||||||  |||| ||||||||||    
T  17666797 taggctgtgtttggtaacccaaaaaagctagcttatagcttattggattaacttataagct 17666857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 270
Target Start/End: Complemental strand, 40862308 - 40862195
Alignment:
Q  156 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttt 255  Q
    ||||| |||||||||||| ||||| ||||||||||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  |||||    
T  40862308 ataggctgtgtttggtaacacaaa-aagctagtttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttt 40862210  T
Q  256 tcacattagcttata 270  Q
    || || |||||||||    
T  40862209 tctcactagcttata 40862195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 38928592 - 38928481
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttca 258  Q
    ||||||||||||||| | ||| ||||||| ||||||||| ||  | ||||||||||||| |||||||||| ||| |||||||||||||||  || ||||     
T  38928592 ggttgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagttttgatagaatgagatgtgtttggtaaaaagcgtttct 38928493  T
Q  259 cattagcttata 270  Q
    ||||||||||||    
T  38928492 cattagcttata 38928481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 163 - 270
Target Start/End: Complemental strand, 18109813 - 18109706
Alignment:
Q  163 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacatt 262  Q
    ||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  ||||||| || |    
T  18109813 gtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcact 18109714  T
Q  263 agcttata 270  Q
     |||||||    
T  18109713 cgcttata 18109706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 270
Target Start/End: Complemental strand, 8341264 - 8341146
Alignment:
Q  152 acacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcg 251  Q
    |||| |||| |||||||||||| ||||||||||||| ||||| ||| ||  | ||||||||||||||  |||||||| ||| ||||||||||| |||  |    
T  8341264 acacgtaggctgtgtttggtaacacaaataagctagcttataacttgttggactagcttataagcttactttgatagaatgagatgtgtttggcaaaaag 8341165  T
Q  252 cttttcacattagcttata 270  Q
    |||||| || |||||||||    
T  8341164 cttttctcactagcttata 8341146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 33178961 - 33179047
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  33178961 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 33179047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 1086038 - 1086127
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggta 246  Q
    |||| |||||||||||| ||||||||||||| ||||||||| ||  | || ||||||||||||||||||||  ||  |||||||||||||    
T  1086038 taggctgtgtttggtaacacaaataagctagcttatagcttgttaaactaacttataagcttgttttgataaaataagatgtgtttggta 1086127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 39532057 - 39532170
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    ||||| ||||||||||| ||||| ||  ||| ||||||||| ||  | ||||||||||| |||||||||||  ||| |||||||||||||||  ||||||    
T  39532057 taggtcgtgtttggtaacacaaaaaaattagcttatagcttgttggactagcttataagtttgttttgataaaatgagatgtgtttggtaaaaagctttt 39532156  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  39532157 ctcactagcttata 39532170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 14452300 - 14452408
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| || ||| |||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||  ||||||  ||     
T  14452300 tgtgtttggtaacacgaattagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaaaagcttttgtcac 14452399  T
Q  262 tagcttata 270  Q
    |||||||||    
T  14452400 tagcttata 14452408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 26340133 - 26340025
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||  ||||| ||| ||  | |||||||||||||||||||||||  ||| ||| |||||||||||  ||||||| ||     
T  26340133 tgtgtttggtaacacaaaaaagctaacttataacttgttggactagcttataagcttgttttgataaaatgagatatgtttggtaaaaagcttttctcac 26340034  T
Q  262 tagcttata 270  Q
    |||||||||    
T  26340033 tagcttata 26340025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 37240949 - 37241057
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||| ||||||||||||||||||| ||||| ||| ||  | ||||||||||| |||||||||||| ||  |||||||||| ||||  ||||||  ||     
T  37240949 tgtgttcggtaatacaaataagctagcttataacttgttagactagcttataagtttgttttgatagaataagatgtgtttgctaaaaagctttttccac 37241048  T
Q  262 tagcttata 270  Q
    |||||||||    
T  37241049 tagcttata 37241057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 44526086 - 44525978
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| | ||||||||||| || |||||| ||  |  ||||||||| ||||||||||||| |||  ||||||||||||||  ||||||  |||    
T  44526086 tgtgtttggtaacataaataagctagcttttagcttgttggacaagcttataaacttgttttgatagaatgaaatgtgtttggtaaaaagcttttttcat 44525987  T
Q  262 tagcttata 270  Q
    |||||||||    
T  44525986 tagcttata 44525978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 6322242 - 6322153
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | ||||||| || ||||||||||||  ||  |||||||||||||||    
T  6322242 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttagaaacttgttttgatataataagatgtgtttggtaaa 6322153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 11447237 - 11447326
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||| |||| ||||||||||||| |||||||||  |  | |||||||||| ||||||||||||| ||  ||||||||| |||||    
T  11447237 ggttgtgtttagtaacacaaataagctagcttatagcttgctggactagcttataaccttgttttgatagaatacgatgtgtttagtaaa 11447326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 165 - 221
Target Start/End: Original strand, 5774096 - 5774152
Alignment:
Q  165 gtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    ||||| ||||||||| ||||||||||||||||| ||  |||||||||||||||||||    
T  5774096 gtttgataatacaaaaaagctagtttatagcttgttggattagcttataagcttgtt 5774152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 248
Target Start/End: Complemental strand, 15265438 - 15265354
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||| ||||||||| ||| ||||||||| ||    ||||||||||||||||||| |||| ||| || ||||||||||||    
T  15265438 tgtttggtaacacaaataagttagcttatagcttcttgggctagcttataagcttgttttaatagaatgagacgtgtttggtaaa 15265354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 176 - 248
Target Start/End: Complemental strand, 28125091 - 28125019
Alignment:
Q  176 caaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| ||||||||| ||  | ||||||||||| ||||||| |||| |||| ||||||||||||||    
T  28125091 caaataagctagcttatagcttgttggactagcttataagtttgttttaatagaatgtcatgtgtttggtaaa 28125019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 257
Target Start/End: Complemental strand, 7183389 - 7183286
Alignment:
Q  154 acataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgct 253  Q
    ||||||| |||||||||||| ||||| ||||||| |||||| || ||  | ||| |||||||||||||||||||  ||   ||||||||||||||  |||    
T  7183389 acataggctgtgtttggtaacacaaaaaagctagcttatagtttgttggactagtttataagcttgttttgataaaataaaatgtgtttggtaaaaagct 7183290  T
Q  254 tttc 257  Q
    ||||    
T  7183289 tttc 7183286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 42519710 - 42519769
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  42519710 aggttgtgtttggtaacacaaaaaagctagcttatagcttgttgcattagcttataagct 42519769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 45376909 - 45376964
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||||||||||||||||||||| ||  | |||||||||||||    
T  45376909 tgtgtttggtaacacaaataagctagtttatagcttgttggactagcttataagct 45376964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 36600937 - 36601023
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||| ||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||   ||||||||||||||    
T  36600937 tgtgtttgataacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataaaatgtgtttggtaaa 36601023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 10247482 - 10247376
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||| ||| |||||| || ||  | |||||||||||||||||||||||  |  ||||||||||||||||  ||||||| |      
T  10247482 tgtgtttggtaacacaaaaaagttagcttatagtttgttggactagcttataagcttgttttgata--aaatgatgtgtttggtaaaaagcttttctcgc 10247385  T
Q  262 tagcttata 270  Q
    |||||||||    
T  10247384 tagcttata 10247376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 35422038 - 35422151
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt--ttgataggatgtgatgtgtttggtaaagcgctt 254  Q
    |||||||||||| |||| ||||| |||||||||||||| || ||  |||||||||||| ||||||  |||| |  | ||||||||||||||||   ||||    
T  35422038 taggttgtgtttagtaacacaaaaaagctagtttatagttttttggattagcttataaacttgttggttgaaa--acgtgatgtgtttggtaacaagctt 35422135  T
Q  255 ttcacattagcttata 270  Q
    ||| ||| ||||||||    
T  35422136 ttctcatgagcttata 35422151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 38245998 - 38245913
Alignment:
Q  163 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||| | ||| ||||||| |||||| |||||  | || |||||||||||||||||| || ||| || ||||||||||||    
T  38245998 gtgtttggtaacataaaaaagctagcttatagtttattggactaacttataagcttgttttgaaagaatgcgacgtgtttggtaaa 38245913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 12161018 - 12160958
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  12161018 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 12160958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 42098011 - 42097955
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagctt 218  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  ||||||||||||||||    
T  42098011 tgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagctt 42097955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 43496161 - 43496217
Alignment:
Q  161 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||||||| | ||||||||||| ||||||||| ||  |||||||||||||||    
T  43496161 ttgtgtttggtaacataaataagctagcttatagcttgttgcattagcttataagct 43496217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 11018131 - 11018076
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  11018131 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 11018076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 14958120 - 14958175
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||||||||| |||||| |||||||||| ||  ||||| |||||||||    
T  14958120 tgtgtttggtaatacaaagaagctaatttatagcttgttggattagtttataagct 14958175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 30523609 - 30523664
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  30523609 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 30523664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 39241260 - 39241205
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  39241260 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 39241205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 6319537 - 6319602
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    |||||||||||| |  |||||||||| ||| ||||| ||  | |||||||||||||||||||||||    
T  6319537 tgtgtttggtaacaagaataagctagcttacagcttgttggactagcttataagcttgttttgata 6319602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 24520317 - 24520264
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 215  Q
    |||||||||||| || |||||||||| ||||||||| ||  |||||||||||||    
T  24520317 tgtgtttggtaacacgaataagctagcttatagcttgttggattagcttataag 24520264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 270
Target Start/End: Complemental strand, 32482341 - 32482236
Alignment:
Q  165 gtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattag 264  Q
    ||||||||| ||||| |||||||||||||| ||  |  | |||||||||||||| |||| |||  ||| || ||||||||||||  ||||||| || |||    
T  32482341 gtttggtaacacaaaaaagctagtttatagtttgctggactagcttataagcttatttttataaaatgagacgtgtttggtaaaaagcttttctcactag 32482242  T
Q  265 cttata 270  Q
     |||||    
T  32482241 tttata 32482236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 10361388 - 10361448
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||    
T  10361388 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagct 10361448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 16496720 - 16496660
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  ||||| |||||||||    
T  16496720 taggatgtgtttggtaacacaaaaaagctagcttatagcttgttggattagtttataagct 16496660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 34245241 - 34245301
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| | ||| ||||||| ||||||||| ||  |||||||||||||||    
T  34245241 taggctgtgtttggtaacataaaaaagctagcttatagcttgttggattagcttataagct 34245301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 38928666 - 38928598
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    ||||||||||||||| |  |||||||||| |||||| || ||  | |||||||||||||||||| ||||    
T  38928666 ggttgtgtttggtaacatgaataagctagcttatagtttgttggactagcttataagcttgtttagata 38928598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 1e-22; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 42628315 - 42628209
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacatta 263  Q
    |||||||||||||||| ||||||||||||||||| ||  | ||||||||||||||| |||||||  ||| |||||||||||||||  ||||||| || ||    
T  42628315 tgtttggtaatacaaaaaagctagtttatagcttgttggactagcttataagcttgctttgataaaatgagatgtgtttggtaaaaagcttttctcacta 42628216  T
Q  264 gcttata 270  Q
    |||||||    
T  42628215 gcttata 42628209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 31656369 - 31656477
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||||||||||||| ||  | ||||||| |||||||||||||||  ||| |||||||||||||||  ||||||| ||     
T  31656369 tgtgtttggtaacacaaaaaagctagtttatagcttgttggactagcttacaagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 31656468  T
Q  262 tagcttata 270  Q
    |||||||||    
T  31656469 tagcttata 31656477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 162 - 271
Target Start/End: Original strand, 31496610 - 31496719
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||| ||||||||| ||||||||| ||  | |||||||||| |||||||| |||| ||| |||||||||||||||  | ||||| |||    
T  31496610 tgtgtttggtaacacagataagctagcttatagcttcttggactagcttataaacttgttttaatagaatgagatgtgtttggtaaaaagtttttctcat 31496709  T
Q  262 tagcttatat 271  Q
    ||||||||||    
T  31496710 tagcttatat 31496719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 5698126 - 5698234
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||| ||||  ||||||| ||     
T  5698126 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttgataaaaagcttttctcac 5698225  T
Q  262 tagcttata 270  Q
    |||||||||    
T  5698226 tagcttata 5698234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 248
Target Start/End: Original strand, 44502556 - 44502647
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||||||| | ||| ||||||| ||||||||||||  |||  ||||||||||||||||||||| ||  |||||||||||||||    
T  44502556 taggttgtgtttggtaacataaaaaagctagcttatagcttattggattgacttataagcttgttttgatagaataagatgtgtttggtaaa 44502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 3796063 - 3795977
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  3796063 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 3795977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 14390417 - 14390530
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  |||  ||||||||||||||  | ||||    
T  14390417 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgaaatgtgtttggtaaaaagttttt 14390516  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  14390517 ctcactagcttata 14390530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 4361157 - 4361051
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacatta 263  Q
    |||||||||| ||||| ||| ||| |||||| |||||  | ||||||||||||||||||| |||| ||| |||||||||||||||   ||||||  ||||    
T  4361157 tgtttggtaacacaaaaaagttagcttatagtttattggactagcttataagcttgttttaatagaatgagatgtgtttggtaaaaaacttttcttatta 4361058  T
Q  264 gcttata 270  Q
    |||||||    
T  4361057 gcttata 4361051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 27667675 - 27667761
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| |||||  || ||||||||||||||||  | ||||||||||| |||||||||||  ||| |||||||||||||||    
T  27667675 tgtgtttggtaacacaaaatagttagtttatagcttattgaactagcttataagtttgttttgataaaatgagatgtgtttggtaaa 27667761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 156 - 270
Target Start/End: Original strand, 35179814 - 35179928
Alignment:
Q  156 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttt 255  Q
    ||||| |||||||||||| | ||| ||||||| ||||||||| ||  | ||||||||||| |||||||||||  ||| |||||||||| ||||  |||||    
T  35179814 ataggctgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagtttgttttgataaaatgagatgtgtttgataaaaagcttt 35179913  T
Q  256 tcacattagcttata 270  Q
    || || |||||||||    
T  35179914 tctcaatagcttata 35179928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 9223835 - 9223948
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||  ||||||||| ||  | || ||||||||||||||||||||  ||  |||||||||||||||  ||||||    
T  9223835 taggctgtgtttggtaacacaaaaaagctaacttatagcttgttggactaacttataagcttgttttgataaaataagatgtgtttggtaaaaagctttt 9223934  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  9223935 ctcactagcttata 9223948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 4640195 - 4640127
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||    
T  4640195 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgata 4640127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 11823580 - 11823639
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||  |||||||||||||||    
T  11823580 aggttgtgtttggtaacacaaaaaagctagtttatagcttgttggattagcttataagct 11823639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 38667187 - 38667299
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagct----tattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    |||||||||||| ||||| ||| ||||||||||||    | ||  | |||||||||||||||||||||||  ||| |||||||||||||||  |||||||    
T  38667187 tgtgtttggtaacacaaaaaagttagtttatagctagtttgttgaactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttc 38667286  T
Q  258 acattagcttata 270  Q
     || |||||||||    
T  38667287 tcactagcttata 38667299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 175 - 270
Target Start/End: Complemental strand, 39325603 - 39325508
Alignment:
Q  175 acaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagcttata 270  Q
    ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||  ||||||| || |||||||||    
T  39325603 acaaaaaagctagcttatagcttgttgaactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcactagcttata 39325508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 44110031 - 44109945
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||| | ||| ||||||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  44110031 tgtgttagataacacaaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 44109945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 44300039 - 44299957
Alignment:
Q  166 tttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||| || |||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  44300039 tttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 44299957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 18545653 - 18545588
Alignment:
Q  205 tagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagcttata 270  Q
    |||||||||||||||||||||||  ||| |||||||||||||||  ||||||| || |||||||||    
T  18545653 tagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcactagcttata 18545588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 41865287 - 41865395
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgat-aggatgtgatgtgtttggtaaagcgcttttcaca 260  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  ||||||||||||||||| || ||| |  | |||||||||||||||| | ||||||| ||    
T  41865287 tgtgtttggtaacacaaaaaagctagcttatagcttcttggattagcttataagcttg-ttggatgaaaacgtgatgtgtttggtaacgagcttttctca 41865385  T
Q  261 ttagcttata 270  Q
    | ||||||||    
T  41865386 tgagcttata 41865395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 5698508 - 5698615
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | || |||||||||||| |||||||  ||| |||||||||| ||||  ||||||| ||     
T  5698508 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttg-tttgataaaatgagatgtgtttgataaaaagcttttctcac 5698606  T
Q  262 tagcttata 270  Q
    |||||||||    
T  5698607 tagcttata 5698615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 268
Target Start/End: Complemental strand, 30899521 - 30899415
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||| |  ||||||||||  |||  ||||||||||||||  ||||||| ||     
T  30899521 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttatatgtctgttttgataaaatgaaatgtgtttggtaaaaagcttttctcac 30899422  T
Q  262 tagctta 268  Q
    |||||||    
T  30899421 tagctta 30899415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 2459745 - 2459689
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagctt 218  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  ||||||||||||||||    
T  2459745 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagctt 2459689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 246
Target Start/End: Original strand, 23259085 - 23259169
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggta 246  Q
    |||||||||||| || |||||| ||| ||||||||| ||  | ||||||||||| |||||||||||  ||  |||||||||||||    
T  23259085 tgtgtttggtaacacgaataagttagcttatagcttgttggactagcttataagtttgttttgatataataagatgtgtttggta 23259169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 27747602 - 27747662
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  27747602 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 27747662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 1190242 - 1190187
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||||||||| ||| ||  |||||||||||||||    
T  1190242 tgtgtttggtaacacaaaaaagctagtttataacttgttggattagcttataagct 1190187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 30358074 - 30358129
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  30358074 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 30358129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 39325611 - 39325666
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  39325611 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 39325666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 270
Target Start/End: Original strand, 42159609 - 42159720
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttca 258  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | ||||||| | | |||||||||||  ||  |||||||||| ||||  ||||||      
T  42159609 ggttgtgtttggtaacacgaataagctagcttatagcttgttggaatagcttaaatgtttgttttgatataataagatgtgtttgctaaaaagctttttt 42159708  T
Q  259 cattagcttata 270  Q
    || |||||||||    
T  42159709 cactagcttata 42159720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 45900169 - 45900224
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||| | ||||||||||||||||| ||  |||||||||||||||    
T  45900169 tgtgtttggtaacacagaaaagctagtttatagcttgttggattagcttataagct 45900224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 50586278 - 50586223
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  50586278 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 50586223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 11756971 - 11756885
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || |||||||||| ||||  ||| ||  | ||||||||||||| |||||||||  ||  |||||||||||||||    
T  11756971 tgtgtttggtaacacgaataagctagcttatgacttgttggactagcttataagctcgttttgatataataagatgtgtttggtaaa 11756885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 221
Target Start/End: Original strand, 38058746 - 38058808
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    ||||||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||| ||||||    
T  38058746 ggttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataaccttgtt 38058808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 40640679 - 40640741
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttg 224  Q
    |||||||||||| | ||||||| ||| |||||||||||   | ||||||||||||||||||||    
T  40640679 tgtgtttggtaacagaaataagatagcttatagcttatcaaactagcttataagcttgttttg 40640741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 43847528 - 43847442
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || |||||||||| |||||| || |   | ||||||||||||| |||||||||  ||  |||||||||||||||    
T  43847528 tgtgtttggtaacacgaataagctagcttatagtttgtcggactagcttataagctagttttgatataataagatgtgtttggtaaa 43847442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 257
Target Start/End: Original strand, 34086201 - 34086294
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    |||||||||| ||||| || |||| |||||| || |   ||||||||||||| |||||||||||| |||  || |||||||||||  |||||||    
T  34086201 tgtttggtaacacaaaaaacctagcttatagtttgtcggattagcttataagtttgttttgatagaatgaaatatgtttggtaaaaagcttttc 34086294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 11332837 - 11332897
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| |||||||||||||| || ||  | |||||||||||||    
T  11332837 taggctgtgtttggtaacacaaaaaagctagtttatagtttgttggactagcttataagct 11332897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 11490858 - 11490918
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| |||||||||||||| || ||  | |||||||||||||    
T  11490858 taggctgtgtttggtaacacaaaaaagctagtttatagtttgttggactagcttataagct 11490918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 38815653 - 38815593
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| ||| |||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  38815653 taggctgtatttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 38815593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 18368838 - 18368725
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  ||||||    
T  18368838 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagctttt 18368739  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  18368738 ctcactagcttata 18368725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 1789787 - 1789895
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| || ||||||||||||  ||||||| ||     
T  1789787 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcac 1789886  T
Q  262 tagcttata 270  Q
    |||||||||    
T  1789887 tagcttata 1789895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 190919 - 191031
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    ||||||| |||| ||| ||||| ||| ||||||||||||| ||  | ||| |||||||||||||||||||  ||| |||||||||||||||  |||||||    
T  190919 aggttgtatttgataacacaaaaaagttagtttatagcttgttggactagtttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttc 191018  T
Q  258 acattagcttata 270  Q
     || |||||||||    
T  191019 tcactagcttata 191031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 4976524 - 4976632
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| || |||| ||||||| | ||  | |||||||||||||||||||||||  ||| || ||||||||||||  ||||||| ||     
T  4976524 tgtgtttggtaacacaaaaaaactagcttatagcctgttggactagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcac 4976623  T
Q  262 tagcttata 270  Q
    |||||||||    
T  4976624 tagcttata 4976632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 18801700 - 18801808
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | || ||||||||||||||||||||  ||| || ||||||||||||  ||||||| ||     
T  18801700 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactaacttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcac 18801799  T
Q  262 tagcttata 270  Q
    ||| |||||    
T  18801800 tagtttata 18801808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 15508349 - 15508435
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || |||||||||| ||||||||| ||  | |||||||||||||| ||||||||  ||  |||||||||||||||    
T  15508349 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttattttgatataataagatgtgtttggtaaa 15508435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 31604011 - 31603925
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||| ||| ||||||||||||| |||||| ||  |  | |||||||||||||||||||||||| ||  |||||||||||||||    
T  31604011 tgtgtttgataacacaaataagctagcttatagtttgctggactagcttataagcttgttttgatagaatacgatgtgtttggtaaa 31603925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 32562513 - 32562445
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    ||||||||||||||| || |||||||||| ||||||||| ||  | ||||||||||| |||||||||||    
T  32562513 ggttgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagtttgttttgata 32562445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 13866263 - 13866346
Alignment:
Q  161 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttgg 244  Q
    ||||||||||||| | ||| ||||||| ||||||||| ||  | |||||||||| || |||||||||| ||| |||||||||||    
T  13866263 ttgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataaactagttttgatagaatgagatgtgtttgg 13866346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 20992371 - 20992309
Alignment:
Q  155 cataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||| |||||||||| ||||| |||||||||||||| || ||  |||||||||||||||    
T  20992371 cataggttctgtttggtaacacaaaaaagctagtttatagtttgttggattagcttataagct 20992309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 24159238 - 24159324
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || |||||| ||| |||||| || ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  24159238 tgtgtttggtaacacgaataaggtagcttatagtttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 24159324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Complemental strand, 5090183 - 5090118
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    |||||||||||| || |||||||||| ||||||||| ||  | ||||||||||| |||||||||||    
T  5090183 tgtgtttggtaacacgaataagctagcttatagcttcttggactagcttataagtttgttttgata 5090118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 25023552 - 25023495
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  25023552 tgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgtt 25023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 24119343 - 24119283
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  24119343 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 24119283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 13756419 - 13756364
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| || || ||||||||||||||||| ||  |||||||||||||||    
T  13756419 tgtgtttggtaacacgaaaaagctagtttatagcttgttggattagcttataagct 13756364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 20645646 - 20645713
Alignment:
Q  150 ttacacataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||| ||||| |||||||||||| ||||| ||||||| |||||| || ||  |||||||||||||||    
T  20645646 ttacaaataggctgtgtttggtaacacaaaaaagctagcttatagtttgttggattagcttataagct 20645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 1290382 - 1290468
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| | ||||||| ||| ||||||||| ||  | |||||||||||||| || |||||| ||  | |||||||||||||    
T  1290382 tgtgtttggtaaaataaataagttagcttatagcttgttagaatagcttataagcttattatgatagaataagttgtgtttggtaaa 1290468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 21860231 - 21860289
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||| |||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  21860231 ggttgtgtttagtaacacaaaaaagctagcttatagcttgttggattagcttataagct 21860289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 270
Target Start/End: Complemental strand, 31259633 - 31259539
Alignment:
Q  176 caaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagcttata 270  Q
    |||| ||||||| ||||||||| ||    |||||||||||||||||||||||  ||| ||||||||| |||||  | ||||| || |||||||||    
T  31259633 caaaaaagctagattatagcttgttgggctagcttataagcttgttttgataaaatgagatgtgtttagtaaaaagtttttctcactagcttata 31259539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 5956417 - 5956530
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| | | ||||||||| ||||| ||| ||  | ||| |||||||||||||||||||| ||  || ||||||| ||||   |||||    
T  5956417 taggctgtgtttggtaacatagataagctagcttataacttcttggactagtttataagcttgttttgatagaataagacgtgtttgataaaaatctttt 5956516  T
Q  257 cacattagcttata 270  Q
    | |||||| |||||    
T  5956517 cccattaggttata 5956530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 159 - 248
Target Start/End: Complemental strand, 34574697 - 34574608
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||| ||| || | |||| ||| ||||| ||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  34574697 ggttgtgtttgataacacgagtaagttagcttataacttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 34574608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 21778190 - 21778130
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||||||||||| | ||  |||| ||||||||||    
T  21778190 taggctgtgtttggtaacacaaaaaagctagtttatagcctgttggattaacttataagct 21778130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 22707286 - 22707346
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  ||||| |||||||||    
T  22707286 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagtttataagct 22707346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 30411351 - 30411243
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||     
T  30411351 tgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 30411252  T
Q  262 tagcttata 270  Q
    |||||||||    
T  30411251 tagcttata 30411243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 48369068 - 48368982
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||| |||||| |||||||||||||| |||||||| ||  | ||||||||||| |||||||||||| |||||||||||||||||||    
T  48369068 tgtgtctggtaacacaaataagctagtgtatagcttgttggactagcttataagattgttttgatagaatgtgatgtgtttggtaaa 48368982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 19912668 - 19912781
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  | ||||    
T  19912668 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagttttt 19912767  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  19912768 ctcactagcttata 19912781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 55610658 - 55610771
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| || |||| ||||||||| || || |||||||||||||||||||||||  ||| |||||||||||||||   |||||    
T  55610658 taggctgtgtttggtaacacaaaaaaactagcttatagcttgttgtactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaaactttt 55610757  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  55610758 ctcactagcttata 55610771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 161 - 248
Target Start/End: Original strand, 51924025 - 51924112
Alignment:
Q  161 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||| ||||| || |||||||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||    
T  51924025 ttgtgtttggtaacacaaaaaaactagtttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaa 51924112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 162 - 248
Target Start/End: Complemental strand, 50792515 - 50792429
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || |||||||||||||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  50792515 tgtgtttggtaacacgaataagctagtttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 50792429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 202290 - 202398
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  ||||||||||||||||| |||||||  ||  || ||||||||||||  ||||||| ||     
T  202290 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagcttgctttgataaaataagacgtgtttggtaaaaagcttttctcac 202389  T
Q  262 tagcttata 270  Q
    |||||||||    
T  202390 tagcttata 202398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 26923638 - 26923530
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| | ||| ||||||| ||||| ||| ||  | ||||||||||||| |||||||||| ||| |||||||||||||||  ||||||| ||     
T  26923638 tgtgtttggtaacataaaaaagctagcttataacttgttaaactagcttataagctagttttgatagaatgagatgtgtttggtaaaaagcttttctcac 26923539  T
Q  262 tagcttata 270  Q
    |||||||||    
T  26923538 tagcttata 26923530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 30653499 - 30653606
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||||| ||||||| ||  |||||||||||||||||||||||||  ||| || ||||||||||||  ||||||| ||     
T  30653499 tgtgtttggtaacacaaaaaagctagtt-atagcttgttggattagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcac 30653597  T
Q  262 tagcttata 270  Q
    || ||||||    
T  30653598 tatcttata 30653606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 45549653 - 45549761
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||||||| ||    |||||||||||||||||||||||  |||  ||||||||||||||  ||||||| ||     
T  45549653 tgtgtttggtaacacaaaaaagctagcttatagcttgttgggctagcttataagcttgttttgataaaatgaaatgtgtttggtaaaaagcttttctcac 45549752  T
Q  262 tagcttata 270  Q
    |||||||||    
T  45549753 tagcttata 45549761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 2390374 - 2390261
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | || |||||||| ||||||||| || ||| || ||||||||||||  | ||||    
T  2390374 taggctgtgtttggtaacacaaaaaagctagcttatagcttcttggactaacttataagtttgttttgaaagaatgagacgtgtttggtaaaaagttttt 2390275  T
Q  257 cacattagcttata 270  Q
    | ||||||||||||    
T  2390274 ctcattagcttata 2390261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 19869960 - 19870025
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    |||||||||||| || |||||||||| ||||||||||||  | |||||||||||||||||||||||    
T  19869960 tgtgtttggtaacacgaataagctagcttatagcttattgaactagcttataagcttgttttgata 19870025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 48953027 - 48953116
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    ||||||||||||||| ||  ||||||||| ||||||||| ||  | |||||||||||||||||||||||  ||  |||||||||||||||    
T  48953027 ggttgtgtttggtaacacggataagctagcttatagcttgttggactagcttataagcttgttttgatataataagatgtgtttggtaaa 48953116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 10658982 - 10658874
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| || ||| |||||| ||||||||||||  | |||||||||||||||||||||||  ||  |||| ||||||||||  ||||||  ||     
T  10658982 tgtgtttggtaacacgaattagctagcttatagcttattggactagcttataagcttgttttgatataataagatgcgtttggtaaaaagcttttttcac 10658883  T
Q  262 tagcttata 270  Q
    |||||||||    
T  10658882 tagcttata 10658874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 10873127 - 10873019
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| || ||| |||||| ||||||||||||  | |||||||||||||||||||||||  ||  |||| ||||||||||  ||||||  ||     
T  10873127 tgtgtttggtaacacgaattagctagcttatagcttattggactagcttataagcttgttttgatataataagatgcgtttggtaaaaagcttttttcac 10873028  T
Q  262 tagcttata 270  Q
    |||||||||    
T  10873027 tagcttata 10873019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Original strand, 28459608 - 28459720
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    ||||||||||||| || ||||| ||| |||||||||| || ||  | || ||||||||||||||||||||  ||| |||||||||||||||  |||||||    
T  28459608 aggttgtgtttggcaacacaaaaaagttagtttatagtttgttggactatcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttc 28459707  T
Q  258 acattagcttata 270  Q
      | |||||||||    
T  28459708 ttactagcttata 28459720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 1771937 - 1771831
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacatta 263  Q
    |||||| ||| ||||| ||| ||| ||||||||| ||  | ||||||||||||||| |||||||  ||| |||||||||||||||  ||||||| || ||    
T  1771937 tgtttgataacacaaaaaagatagcttatagcttgttggactagcttataagcttgctttgataaaatgagatgtgtttggtaaaaagcttttctcacta 1771838  T
Q  264 gcttata 270  Q
    |||||||    
T  1771837 gcttata 1771831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 43590534 - 43590620
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| || |||||||||| ||||||||| ||  | ||||||||||| |||||||||||  ||  |||||||||||||||    
T  43590534 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagtttgttttgatataataagatgtgtttggtaaa 43590620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 270
Target Start/End: Original strand, 50790826 - 50790932
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacatta 263  Q
    |||||||||| || |||||||||| ||||| ||| ||  | |||||||||||||||||||||||  ||  |||||||||||| ||  ||||||  |||||    
T  50790826 tgtttggtaacacgaataagctagcttataacttgttggactagcttataagcttgttttgatataataagatgtgtttggtgaaaagcttttttcatta 50790925  T
Q  264 gcttata 270  Q
    |||||||    
T  50790926 gcttata 50790932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 318748 - 318683
Alignment:
Q  205 tagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagcttata 270  Q
    |||||||||||||||||||||||  ||| || ||||||||||||  ||||||| ||||||||||||    
T  318748 tagcttataagcttgttttgataaaatgagacgtgtttggtaaaaagcttttctcattagcttata 318683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 162 - 278
Target Start/End: Complemental strand, 7113614 - 7113493
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttg----ttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    |||||||||||| | ||| ||||||| ||||||||| ||  | ||||||||||||| |    ||||||||| ||| |||||||||||||||  |||||||    
T  7113614 tgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagctagttttgatagaatgagatgtgtttggtaaaaagcttttc 7113515  T
Q  258 acattagcttata-tgtttttt 278  Q
     || ||||||||| ||||||||    
T  7113514 tcactagcttatagtgtttttt 7113493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 39840299 - 39840239
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  39840299 taggttgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 39840239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 249
Target Start/End: Complemental strand, 19871072 - 19870985
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaag 249  Q
    |||||||||||| || |||||||||| |||||||||  |  | |||||||||| ||||||||||||  ||  ||||||||||||||||    
T  19871072 tgtgtttggtaacacgaataagctagcttatagcttgctggactagcttataaccttgttttgatataataagatgtgtttggtaaag 19870985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 31997875 - 31997918
Alignment:
Q  205 tagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||||||||||||||| |||||||||||||| ||||    
T  31997875 tagcttataagcttgttttgatagaatgtgatgtgtttgataaa 31997918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 248
Target Start/End: Original strand, 27531830 - 27531916
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||| ||||||| ||||  ||||||||| ||  | ||| |||||||||||||||||||| ||  |||||| ||||||||    
T  27531830 tgtgtttggtaacacaaataggctaacttatagcttgttggactagtttataagcttgttttgatagaatacgatgtgattggtaaa 27531916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 19801968 - 19801907
Alignment:
Q  156 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  19801968 ataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 19801907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 247
Target Start/End: Original strand, 20986274 - 20986359
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaa 247  Q
    |||||||||||| | ||||||||||  ||||||||| ||  | || ||||||| ||||||||||||  ||| ||||||||||||||    
T  20986274 tgtgtttggtaacataaataagctaacttatagcttgttggactaacttataaacttgttttgataaaatgagatgtgtttggtaa 20986359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 25686981 - 25687094
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| |||||| ||||||| || ||  ||||||||||||||||||| |   |  | ||||||||||||||||   ||||||    
T  25686981 taggctgtgtttggtaacacaaaaaagctaatttatagttttttggattagcttataagcttgttgtatgaaaacgtgatgtgtttggtaacaagctttt 25687080  T
Q  257 cacattagcttata 270  Q
    | ||| ||||||||    
T  25687081 ctcatgagcttata 25687094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 24152671 - 24152711
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagctt 197  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  24152671 taggttgtgtttggtaacacaaataagctagcttatagctt 24152711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 30996746 - 30996710
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttata 193  Q
    ||||||||||||||||| |||||||||||||||||||    
T  30996746 taggttgtgtttggtaacacaaataagctagtttata 30996710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 6238188 - 6238243
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  6238188 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 6238243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 33984088 - 33984143
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  33984088 tgtgtttggtaacacaaaaaagctagcttatagcttgttgaattagcttataagct 33984143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 227
Target Start/End: Original strand, 49646027 - 49646090
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    |||||||||| || |||||| ||| ||||||| | ||  |||||||||||||||||||||||||    
T  49646027 tgtttggtaacacgaataagttagcttatagcctgttggattagcttataagcttgttttgata 49646090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 53284007 - 53284062
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  53284007 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 53284062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 14269922 - 14269864
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgt 220  Q
    |||||||||||| || |||||||||| ||||||||| ||  | ||||||||||||||||    
T  14269922 tgtgtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgt 14269864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Complemental strand, 37114532 - 37114478
Alignment:
Q  163 gtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  37114532 gtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 37114478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 45618060 - 45618142
Alignment:
Q  161 ttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttg 243  Q
    ||||||||||||| | ||||||||||| |||| | || ||  | ||||||||||| ||||||| |||| ||| ||||||||||    
T  45618060 ttgtgtttggtaacataaataagctagcttatggtttgttagactagcttataagtttgttttaatagaatgcgatgtgtttg 45618142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 226
Target Start/End: Original strand, 55660548 - 55660610
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgat 226  Q
    |||||||||| | ||||||||||| ||||||||| ||  | |||||||||| |||||||||||    
T  55660548 tgtttggtaacataaataagctagcttatagcttgttggactagcttataaacttgttttgat 55660610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 28778556 - 28778609
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 215  Q
    |||||||||||| | ||||||||||||||||||||| ||  |||| ||||||||    
T  28778556 tgtgtttggtaacataaataagctagtttatagcttgttagattaacttataag 28778609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Complemental strand, 49335290 - 49335237
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 215  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||    
T  49335290 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataag 49335237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 222
Target Start/End: Complemental strand, 49648916 - 49648859
Alignment:
Q  165 gtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttt 222  Q
    ||||||||| || |||||||||| ||||||||| ||  | ||||||||||||||||||    
T  49648916 gtttggtaacacgaataagctagcttatagcttgttggactagcttataagcttgttt 49648859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 193
Target Start/End: Complemental strand, 318776 - 318740
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttata 193  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  318776 taggttgtgtttggtaacacaaataagctagcttata 318740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 30653395 - 30653331
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    ||||||||||||||||| ||||| ||| ||| |||| |||| ||  | |||||||||||||||||    
T  30653395 taggttgtgtttggtaacacaaaaaagttagcttatggcttgttggactagcttataagcttgtt 30653331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 38005551 - 38005631
Alignment:
Q  168 tggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||| | ||| ||| ||| ||||||||| ||  | ||| ||||||| |||||||||||| ||| |||||||||||||||    
T  38005551 tggtaacataaaaaagttagcttatagcttgttggactagtttataagtttgttttgatagaatgagatgtgtttggtaaa 38005631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 45561419 - 45561360
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  45561419 taggctgtgtttggtaacacaaa-aagctagcttatagcttgttggattagcttataagct 45561360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 3e-20; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 158 - 248
Target Start/End: Original strand, 11575618 - 11575708
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||| |||||||||||| ||| |||||||||||||||    
T  11575618 aggttgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagtttgttttgatagaatgagatgtgtttggtaaa 11575708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 13018994 - 13019102
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||||||| ||||| ||| ||  | ||||||||||| |||||||||||  ||| |||||||||||||||  ||||||| ||     
T  13018994 tgtgtttggtaacacaaaaaagctagcttataacttgttggactagcttataagtttgttttgataaaatgagatgtgtttggtaaaaagcttttctcac 13019093  T
Q  262 tagcttata 270  Q
    |||||||||    
T  13019094 tagcttata 13019102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 267
Target Start/End: Original strand, 1923942 - 1924052
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||||||| |||||||  ||| || ||||||||||||  ||||||    
T  1923942 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgctttgataaaatgagacgtgtttggtaaaaagctttt 1924041  T
Q  257 cacattagctt 267  Q
    | || ||||||    
T  1924042 ctcactagctt 1924052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 270
Target Start/End: Complemental strand, 4559584 - 4559471
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| | ||| ||||||| ||||||||| ||  |  ||||||||||||||| ||||||| ||| |||||||||||||||   |||||    
T  4559584 taggctgtgtttggtaacataaaaaagctagcttatagcttgttggacaagcttataagcttgtcttgatagaatgagatgtgtttggtaaaaaactttt 4559485  T
Q  257 cacattagcttata 270  Q
      ||||||||||||    
T  4559484 ttcattagcttata 4559471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 205 - 270
Target Start/End: Complemental strand, 7948494 - 7948429
Alignment:
Q  205 tagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacattagcttata 270  Q
    |||||||||||||||||||||||  ||| |||||||||||||||  ||||||| ||||||||||||    
T  7948494 tagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttctcattagcttata 7948429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 156 - 221
Target Start/End: Original strand, 35766553 - 35766618
Alignment:
Q  156 ataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    |||||||||||||| ||||||||| ||||||| ||||||||| ||  |||||||||||||||||||    
T  35766553 ataggttgtgtttgataatacaaaaaagctagcttatagcttcttggattagcttataagcttgtt 35766618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 8520567 - 8520675
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| | ||| |||||||  |||||||| ||  | ||||||||||||| |||||||||| ||| |||||||||||||||   |||||| ||     
T  8520567 tgtgtttggtaacataaaaaagctagcatatagcttgttagactagcttataagctagttttgatagaatgagatgtgtttggtaaaaatcttttctcac 8520666  T
Q  262 tagcttata 270  Q
    |||||||||    
T  8520667 tagcttata 8520675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 158 - 270
Target Start/End: Complemental strand, 20768971 - 20768859
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttc 257  Q
    ||||||||||||| || ||||| ||| |||||||||| || ||  | || ||||||||||||||||||||  ||| |||||||||||||||  |||||||    
T  20768971 aggttgtgtttggcaacacaaaaaagttagtttatagtttgttggactatcttataagcttgttttgataaaatgagatgtgtttggtaaaaagcttttc 20768872  T
Q  258 acattagcttata 270  Q
      | |||||||||    
T  20768871 ttactagcttata 20768859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 159 - 270
Target Start/End: Complemental strand, 20017408 - 20017297
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttca 258  Q
    ||||| ||||| ||| ||||| || |||| ||||||||| ||  | |||||||||||||||||||||||  ||| |||||||||||||||  | |||||     
T  20017408 ggttgcgtttgataacacaaaaaaactagcttatagcttgttggactagcttataagcttgttttgataaaatgagatgtgtttggtaaaaagtttttct 20017309  T
Q  259 cattagcttata 270  Q
    || |||||||||    
T  20017308 cactagcttata 20017297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 3703454 - 3703508
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagctt 218  Q
    |||||||||| | ||||||||||||||||||||| || |||||||||||||||||    
T  3703454 tgtttggtaacataaataagctagtttatagcttgttatattagcttataagctt 3703508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 248
Target Start/End: Original strand, 15524359 - 15524448
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||||||||| |||| || |||||||||| ||||||||| ||  | |||||||||| ||||||||||||  ||  |||||||||||||||    
T  15524359 ggttgtgtttcgtaacacgaataagctagcttatagcttgttagactagcttataaccttgttttgatataataagatgtgtttggtaaa 15524448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 34590032 - 34589970
Alignment:
Q  155 cataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  34590032 cataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 34589970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 37530851 - 37530789
Alignment:
Q  155 cataggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||| |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  37530851 cataggctgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 37530789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 3033390 - 3033459
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgatag 228  Q
    ||||||||||||||| | ||| ||||||| ||||||||| ||  | ||||||||||||| ||||||||||    
T  3033390 ggttgtgtttggtaacataaaaaagctagcttatagcttgttggactagcttataagctagttttgatag 3033459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 227
Target Start/End: Original strand, 8520497 - 8520562
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    |||||||||||| || |||||||||  ||||||||| ||  | |||||||||||||||||||||||    
T  8520497 tgtgtttggtaacacgaataagctaacttatagcttgttggactagcttataagcttgttttgata 8520562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 270
Target Start/End: Complemental strand, 3078640 - 3078532
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| ||||| ||| ||| ||||| ||| ||  | |||||||||| ||||||||||||  ||| || ||||||||||||  | ||||| ||     
T  3078640 tgtgtttggtaacacaaaaaagttagcttataacttgttggactagcttataaacttgttttgataaaatgagacgtgtttggtaaaaagtttttctcac 3078541  T
Q  262 tagcttata 270  Q
    |||||||||    
T  3078540 tagcttata 3078532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 5050201 - 5050146
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| | ||||||||||| ||||||||| ||  |||||||||||||||    
T  5050201 tgtgtttggtaacataaataagctagcttatagcttgttggattagcttataagct 5050146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 6789713 - 6789658
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  6789713 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 6789658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 7615101 - 7615046
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||||||||| ||||||  ||||||||| ||  |||||||||||||||    
T  7615101 tgtgtttggtaatacaaaaaagctaccttatagcttgttggattagcttataagct 7615046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 15498645 - 15498700
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  15498645 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 15498700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 24171365 - 24171420
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  24171365 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 24171420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 26286240 - 26286177
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    ||||||||||||||||| | |||||||||  ||||||||||||  ||||  |||||||||||||    
T  26286240 aggttgtgtttggtaatgccaataagctaccttatagcttattggattaagttataagcttgtt 26286177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 29525420 - 29525365
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  29525420 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 29525365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 41734368 - 41734313
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  41734368 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 41734313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 42422807 - 42422862
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||||||||||||| ||  |||| ||||||||||    
T  42422807 tgtgtttggtaacacaaaaaagctagtttatagcttgttgaattaacttataagct 42422862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 42709311 - 42709366
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  42709311 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 42709366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 76411 - 76469
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||||| ||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  76411 ggttgtgtttgataacacaaaaaagctagcttatagctttttggattagcttataagct 76469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 217
Target Start/End: Original strand, 25881504 - 25881562
Alignment:
Q  159 ggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||||||||| | ||||| ||||| ||||||||| ||  |||||||||||||||    
T  25881504 ggttgtgtttggtaacataaataggctagcttatagcttgttagattagcttataagct 25881562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 227
Target Start/End: Original strand, 3033335 - 3033384
Alignment:
Q  178 aataagctagtttatagcttattctattagcttataagcttgttttgata 227  Q
    |||||||||| ||||||||| ||  | |||||||||||||||||||||||    
T  3033335 aataagctagcttatagcttgttagactagcttataagcttgttttgata 3033384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 16218405 - 16218352
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  16218405 tgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 16218352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 162 - 215
Target Start/End: Original strand, 17645306 - 17645359
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataag 215  Q
    |||||||||||| | ||||||||||| ||||||||| ||  |||||||||||||    
T  17645306 tgtgtttggtaacataaataagctagcttatagcttgttagattagcttataag 17645359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 214
Target Start/End: Original strand, 23590634 - 23590691
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataa 214  Q
    ||||||||||||||||| ||||| ||| ||||||||| ||| ||  ||||||||||||    
T  23590634 taggttgtgtttggtaacacaaaaaagatagtttataacttgttggattagcttataa 23590691  T

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Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 36944344 - 36944280
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgtt 221  Q
    ||||||||||||||||| | ||| ||||||| ||||||||| ||  | || ||||||||||||||    
T  36944344 taggttgtgtttggtaacataaaaaagctagcttatagcttgttagactaacttataagcttgtt 36944280  T

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Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 157 - 197
Target Start/End: Original strand, 36959461 - 36959501
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagctt 197  Q
    ||||||||||||||||| ||||| ||||||| |||||||||    
T  36959461 taggttgtgtttggtaacacaaaaaagctagcttatagctt 36959501  T

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Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 41356263 - 41356307
Alignment:
Q  204 ttagcttataagcttgttttgataggatgtgatgtgtttggtaaa 248  Q
    |||| |||||||||||||||||||| ||| |||||||||| ||||    
T  41356263 ttagtttataagcttgttttgatagaatgggatgtgtttgataaa 41356307  T

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Target: scaffold0115 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 4144 - 4257
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||||||||||| |||  ||| |||||||||||||||  ||||||    
T  4144 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaaaagctttt 4243  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  4244 ctcactagcttata 4257  T

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Target: scaffold0115; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 11884 - 11997
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgctttt 256  Q
    |||| |||||||||||| ||||| ||||||| ||||||||| ||  | ||||||||||||||||||| |||  ||| |||||||||||||||  ||||||    
T  11884 taggctgtgtttggtaacacaaaaaagctagcttatagcttgttggactagcttataagcttgttttaataaaatgagatgtgtttggtaaaaagctttt 11983  T
Q  257 cacattagcttata 270  Q
    | || |||||||||    
T  11984 ctcactagcttata 11997  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 270
Target Start/End: Complemental strand, 94501 - 94395
Alignment:
Q  164 tgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacatta 263  Q
    |||||||||| || |||||||||| ||||||||| ||  | |||||||||| ||||||||||||  ||  |||||||||||||||  ||||||  || ||    
T  94501 tgtttggtaacacgaataagctagcttatagcttgttgaactagcttataaacttgttttgatataataagatgtgtttggtaaaaagcttttttcacta 94402  T
Q  264 gcttata 270  Q
    |||||||    
T  94401 gcttata 94395  T

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Target: scaffold0076 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Complemental strand, 14295 - 14235
Alignment:
Q  157 taggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    ||||||||||||||||| ||||| ||||||| |||||| |||||  ||||| |||||||||    
T  14295 taggttgtgtttggtaacacaaaaaagctagcttatagtttattggattagattataagct 14235  T

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Target: scaffold0060 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 162 - 217
Target Start/End: Complemental strand, 57948 - 57893
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||| ||||| ||||||| ||||||||| ||  |||||||||||||||    
T  57948 tgtgtttggtaacacaaaaaagctagcttatagcttgttggattagcttataagct 57893  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 157718 - 157659
Alignment:
Q  158 aggttgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagct 217  Q
    |||||||||||||||| | ||||||||||| |||||| || ||  |||||||||||||||    
T  157718 aggttgtgtttggtaacataaataagctagcttatagtttgttagattagcttataagct 157659  T

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Target: scaffold0039 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 162 - 270
Target Start/End: Original strand, 76244 - 76352
Alignment:
Q  162 tgtgtttggtaatacaaataagctagtttatagcttattctattagcttataagcttgttttgataggatgtgatgtgtttggtaaagcgcttttcacat 261  Q
    |||||||||||| | ||| ||| ||| |||||| || ||  | ||||||||||  |||||||||||| ||| |||||||||||| ||   |||||| ||     
T  76244 tgtgtttggtaacataaaaaaggtagcttatagtttgttggactagcttataaatttgttttgatagaatgagatgtgtttggtgaaaaacttttctcac 76343  T
Q  262 tagcttata 270  Q
    |||||||||    
T  76344 tagcttata 76352  T

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