View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17861_low_59 (Length: 236)
Name: NF17861_low_59
Description: NF17861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17861_low_59 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 43117454 - 43117632
Alignment:
| Q |
1 |
caaatcagctaattttgcaactgaaacggacaaaatcaagattacaaaatgttaattagtgagcctaattcaaattgaaataaaattgagaacataatct |
100 |
Q |
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| T |
43117454 |
caaatcagctaattttgcaactgaaacggacaaaatcaagattacaaaatgttaattagtgagcctaattcaaattgaaataaaattgagaacagaatct |
43117553 |
T |
|
| Q |
101 |
atgaataccttgattgaggagccttgtgcaagtgggtaagactagcataaggtccaagtttctgatgttctattagcag |
179 |
Q |
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| T |
43117554 |
atgaataccttgattgaggagccttgtgcaagtgggtaagactagcataaggtccaagtttctgatgttctattagcag |
43117632 |
T |
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