View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17861_low_8 (Length: 521)

Name: NF17861_low_8
Description: NF17861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17861_low_8
NF17861_low_8
[»] chr8 (36 HSPs)
chr8 (289-508)||(34789742-34789961)
chr8 (16-153)||(34789470-34789607)
chr8 (340-506)||(7944453-7944619)
chr8 (339-502)||(5973037-5973200)
chr8 (408-506)||(11290190-11290288)
chr8 (340-491)||(30674334-30674485)
chr8 (340-506)||(15078764-15078930)
chr8 (340-506)||(15167344-15167512)
chr8 (331-506)||(34048630-34048804)
chr8 (336-508)||(8646210-8646381)
chr8 (408-506)||(2952220-2952318)
chr8 (408-506)||(30883335-30883433)
chr8 (408-506)||(45475823-45475921)
chr8 (409-506)||(39332405-39332502)
chr8 (357-506)||(8102918-8103069)
chr8 (340-506)||(41677103-41677271)
chr8 (408-508)||(41879185-41879285)
chr8 (409-508)||(5860744-5860843)
chr8 (415-506)||(42600788-42600879)
chr8 (408-506)||(13534686-13534783)
chr8 (408-506)||(13624226-13624323)
chr8 (408-506)||(23606628-23606726)
chr8 (409-506)||(23798261-23798358)
chr8 (408-506)||(10917397-10917495)
chr8 (433-506)||(5942702-5942775)
chr8 (409-506)||(14509983-14510079)
chr8 (331-399)||(5942780-5942848)
chr8 (410-506)||(25561496-25561590)
chr8 (409-451)||(9108554-9108596)
chr8 (408-506)||(37430157-37430255)
chr8 (341-451)||(34868108-34868219)
chr8 (408-502)||(3048516-3048610)
chr8 (413-491)||(23941095-23941173)
chr8 (353-399)||(34812701-34812747)
chr8 (343-448)||(38009085-38009191)
chr8 (340-387)||(38843426-38843473)
[»] chr2 (36 HSPs)
chr2 (331-506)||(16097013-16097188)
chr2 (340-506)||(21665632-21665797)
chr2 (329-506)||(24035465-24035642)
chr2 (331-506)||(38400803-38400978)
chr2 (354-494)||(13800489-13800630)
chr2 (362-506)||(28425660-28425807)
chr2 (408-506)||(6965012-6965110)
chr2 (408-506)||(12337447-12337545)
chr2 (408-506)||(29939861-29939959)
chr2 (409-506)||(10762565-10762662)
chr2 (413-506)||(24410442-24410535)
chr2 (416-508)||(8907086-8907178)
chr2 (408-506)||(9046034-9046133)
chr2 (408-506)||(3155222-3155320)
chr2 (408-506)||(4505899-4505997)
chr2 (343-490)||(42029166-42029317)
chr2 (329-449)||(22727377-22727497)
chr2 (408-503)||(12134039-12134134)
chr2 (336-493)||(10252431-10252591)
chr2 (409-503)||(16227368-16227462)
chr2 (353-438)||(44914848-44914932)
chr2 (329-503)||(11912676-11912851)
chr2 (408-506)||(26716133-26716232)
chr2 (415-506)||(27506746-27506837)
chr2 (408-495)||(34693991-34694078)
chr2 (408-495)||(34716403-34716490)
chr2 (340-465)||(11952520-11952643)
chr2 (408-485)||(40636164-40636241)
chr2 (336-396)||(12694794-12694854)
chr2 (343-506)||(3953011-3953173)
chr2 (408-506)||(7162789-7162887)
chr2 (442-506)||(37182675-37182739)
chr2 (408-506)||(7742132-7742231)
chr2 (437-505)||(22727530-22727598)
chr2 (343-395)||(37182760-37182812)
chr2 (362-398)||(37622308-37622344)
[»] chr4 (49 HSPs)
chr4 (340-506)||(52468297-52468462)
chr4 (340-506)||(36118389-36118554)
chr4 (340-502)||(39329322-39329484)
chr4 (353-506)||(47128998-47129151)
chr4 (408-506)||(54780788-54780886)
chr4 (408-508)||(32128593-32128693)
chr4 (328-490)||(39655171-39655334)
chr4 (408-506)||(2790739-2790837)
chr4 (408-506)||(10978911-10979009)
chr4 (411-505)||(36178684-36178778)
chr4 (408-506)||(43455529-43455627)
chr4 (344-506)||(27112041-27112202)
chr4 (409-506)||(38209590-38209687)
chr4 (408-506)||(16845032-16845131)
chr4 (415-506)||(34027590-34027681)
chr4 (420-506)||(5128852-5128938)
chr4 (353-506)||(24396945-24397099)
chr4 (416-506)||(37777229-37777319)
chr4 (409-506)||(35779325-35779421)
chr4 (408-508)||(48209249-48209349)
chr4 (360-502)||(10041949-10042092)
chr4 (408-503)||(36362869-36362964)
chr4 (336-451)||(24614019-24614135)
chr4 (408-506)||(32915396-32915494)
chr4 (408-506)||(34768572-34768670)
chr4 (353-506)||(54083185-54083338)
chr4 (417-505)||(37514671-37514759)
chr4 (348-399)||(5893130-5893181)
chr4 (417-506)||(1105543-1105632)
chr4 (413-506)||(2135324-2135417)
chr4 (433-506)||(4167914-4167987)
chr4 (418-503)||(13460221-13460306)
chr4 (408-502)||(51691913-51692009)
chr4 (408-488)||(16922327-16922407)
chr4 (411-506)||(15735106-15735196)
chr4 (408-450)||(30507120-30507162)
chr4 (408-506)||(35465118-35465215)
chr4 (417-506)||(37744916-37745006)
chr4 (433-506)||(40089527-40089600)
chr4 (415-486)||(10428202-10428273)
chr4 (408-506)||(19498515-19498611)
chr4 (408-485)||(17679432-17679509)
chr4 (422-506)||(40217243-40217327)
chr4 (413-505)||(45656187-45656279)
chr4 (408-451)||(9578662-9578705)
chr4 (340-399)||(11906832-11906891)
chr4 (408-499)||(16882393-16882484)
chr4 (472-506)||(24969448-24969482)
chr4 (415-463)||(23508515-23508564)
[»] scaffold0012 (1 HSPs)
scaffold0012 (356-506)||(206436-206586)
[»] chr1 (37 HSPs)
chr1 (340-506)||(45758511-45758679)
chr1 (408-508)||(38853537-38853637)
chr1 (362-506)||(43235720-43235866)
chr1 (340-506)||(5533329-5533495)
chr1 (340-506)||(38546966-38547132)
chr1 (415-506)||(27559654-27559745)
chr1 (408-506)||(5316697-5316795)
chr1 (408-506)||(23185444-23185542)
chr1 (408-506)||(44655758-44655856)
chr1 (353-506)||(17168973-17169126)
chr1 (349-506)||(41697076-41697233)
chr1 (340-506)||(39134650-39134819)
chr1 (413-506)||(9173026-9173119)
chr1 (413-506)||(9181008-9181101)
chr1 (408-508)||(33170774-33170874)
chr1 (408-506)||(5027566-5027664)
chr1 (408-506)||(14146317-14146415)
chr1 (408-506)||(50881447-50881545)
chr1 (409-506)||(4971617-4971714)
chr1 (417-502)||(6771812-6771897)
chr1 (417-506)||(16140072-16140161)
chr1 (409-508)||(26803963-26804059)
chr1 (416-505)||(40501796-40501885)
chr1 (410-502)||(1366878-1366970)
chr1 (408-506)||(10925951-10926050)
chr1 (408-506)||(3406435-3406533)
chr1 (408-506)||(3440287-3440385)
chr1 (340-506)||(6221695-6221859)
chr1 (408-488)||(6889646-6889726)
chr1 (408-488)||(6891492-6891572)
chr1 (415-506)||(19955734-19955825)
chr1 (408-502)||(21740935-21741029)
chr1 (408-506)||(50146313-50146411)
chr1 (416-506)||(51607445-51607536)
chr1 (408-498)||(35392295-35392384)
chr1 (408-451)||(17322621-17322664)
chr1 (408-451)||(22865459-22865502)
[»] scaffold1590 (1 HSPs)
scaffold1590 (353-505)||(202-354)
[»] chr3 (33 HSPs)
chr3 (345-502)||(25855435-25855591)
chr3 (340-508)||(49393097-49393263)
chr3 (360-493)||(32319108-32319239)
chr3 (353-506)||(8073282-8073435)
chr3 (408-500)||(8420341-8420433)
chr3 (408-506)||(21582780-21582878)
chr3 (408-506)||(37168376-37168474)
chr3 (408-506)||(54619202-54619300)
chr3 (409-506)||(789945-790042)
chr3 (415-508)||(27078575-27078668)
chr3 (415-508)||(27084372-27084465)
chr3 (358-506)||(3953845-3953993)
chr3 (408-508)||(53506883-53506983)
chr3 (362-494)||(26279563-26279694)
chr3 (408-506)||(34290635-34290733)
chr3 (408-503)||(54407157-54407252)
chr3 (408-506)||(38681092-38681190)
chr3 (416-506)||(44708486-44708576)
chr3 (408-506)||(54574826-54574924)
chr3 (417-506)||(47467693-47467782)
chr3 (343-506)||(43207172-43207334)
chr3 (415-506)||(50939239-50939330)
chr3 (408-506)||(36716024-36716122)
chr3 (408-506)||(42098810-42098908)
chr3 (408-506)||(18372488-18372590)
chr3 (355-508)||(28689307-28689460)
chr3 (355-506)||(36605974-36606125)
chr3 (408-503)||(9878686-9878781)
chr3 (340-466)||(23641248-23641375)
chr3 (408-466)||(42453453-42453511)
chr3 (344-505)||(52374666-52374828)
chr3 (408-506)||(53149313-53149411)
chr3 (408-466)||(50258622-50258680)
[»] chr5 (43 HSPs)
chr5 (340-506)||(2530826-2530991)
chr5 (408-506)||(36868872-36868970)
chr5 (329-506)||(10407467-10407644)
chr5 (343-506)||(26718880-26719043)
chr5 (343-506)||(26988624-26988787)
chr5 (340-506)||(34425909-34426075)
chr5 (353-506)||(33037786-33037941)
chr5 (353-508)||(38869304-38869459)
chr5 (357-506)||(2412094-2412239)
chr5 (409-506)||(14318382-14318479)
chr5 (340-508)||(40794254-40794423)
chr5 (329-506)||(11242236-11242412)
chr5 (408-506)||(2024638-2024736)
chr5 (329-500)||(22648655-22648824)
chr5 (408-508)||(22986554-22986654)
chr5 (360-506)||(1366474-1366620)
chr5 (408-506)||(34756362-34756460)
chr5 (408-505)||(28822338-28822435)
chr5 (415-506)||(9364297-9364388)
chr5 (415-506)||(16198797-16198888)
chr5 (408-506)||(27079017-27079115)
chr5 (408-508)||(36187875-36187975)
chr5 (408-502)||(2274900-2274994)
chr5 (408-506)||(16592070-16592168)
chr5 (408-506)||(23284058-23284156)
chr5 (408-506)||(30854335-30854433)
chr5 (408-506)||(31194608-31194705)
chr5 (417-506)||(15480094-15480183)
chr5 (340-448)||(35080700-35080806)
chr5 (355-503)||(10543682-10543829)
chr5 (418-506)||(19523205-19523293)
chr5 (415-499)||(40389539-40389623)
chr5 (409-488)||(7338023-7338102)
chr5 (416-506)||(16799331-16799421)
chr5 (416-506)||(24395745-24395835)
chr5 (408-451)||(606215-606258)
chr5 (409-506)||(41911614-41911711)
chr5 (415-506)||(7670930-7671022)
chr5 (422-506)||(27924088-27924172)
chr5 (408-451)||(27530544-27530587)
chr5 (408-506)||(31881430-31881527)
chr5 (413-453)||(22875001-22875041)
chr5 (340-398)||(27530608-27530666)
[»] scaffold1320 (1 HSPs)
scaffold1320 (340-506)||(1360-1526)
[»] chr7 (38 HSPs)
chr7 (329-506)||(2611180-2611358)
chr7 (340-506)||(23859079-23859245)
chr7 (343-506)||(27237357-27237519)
chr7 (340-498)||(38971267-38971424)
chr7 (409-506)||(9021799-9021896)
chr7 (340-500)||(23744808-23744968)
chr7 (410-506)||(36902924-36903020)
chr7 (409-500)||(6765680-6765771)
chr7 (340-506)||(23020415-23020579)
chr7 (353-506)||(29077226-29077379)
chr7 (408-506)||(7398457-7398555)
chr7 (408-506)||(48983842-48983940)
chr7 (343-451)||(12419428-12419536)
chr7 (408-508)||(18776764-18776864)
chr7 (408-506)||(8171537-8171635)
chr7 (408-506)||(20091279-20091377)
chr7 (344-495)||(21763523-21763672)
chr7 (416-506)||(20153207-20153297)
chr7 (408-506)||(36891584-36891682)
chr7 (408-506)||(38414874-38414972)
chr7 (415-508)||(10329415-10329508)
chr7 (417-506)||(12596294-12596383)
chr7 (413-506)||(24525688-24525781)
chr7 (353-506)||(9014712-9014858)
chr7 (408-506)||(10955490-10955588)
chr7 (340-506)||(12981332-12981496)
chr7 (433-506)||(23551094-23551167)
chr7 (329-394)||(26917650-26917715)
chr7 (408-488)||(26254017-26254097)
chr7 (343-506)||(8239693-8239856)
chr7 (455-506)||(17800266-17800317)
chr7 (408-506)||(19692100-19692198)
chr7 (409-465)||(9014177-9014233)
chr7 (341-506)||(18201143-18201306)
chr7 (415-506)||(47984974-47985066)
chr7 (409-488)||(33162338-33162417)
chr7 (408-506)||(28749716-28749813)
chr7 (472-506)||(25010439-25010473)
[»] scaffold0022 (2 HSPs)
scaffold0022 (343-506)||(40091-40257)
scaffold0022 (343-506)||(138151-138317)
[»] scaffold0039 (1 HSPs)
scaffold0039 (408-506)||(106544-106642)
[»] scaffold0007 (1 HSPs)
scaffold0007 (340-506)||(230792-230956)
[»] chr6 (23 HSPs)
chr6 (420-506)||(21183686-21183772)
chr6 (408-506)||(13727398-13727496)
chr6 (408-506)||(20711719-20711817)
chr6 (408-506)||(21479503-21479601)
chr6 (344-506)||(2477520-2477681)
chr6 (408-506)||(21280554-21280652)
chr6 (408-506)||(27788687-27788785)
chr6 (416-506)||(33774126-33774216)
chr6 (409-506)||(1155849-1155946)
chr6 (417-506)||(24711007-24711096)
chr6 (412-500)||(6159453-6159541)
chr6 (415-506)||(28075792-28075883)
chr6 (415-505)||(17353964-17354054)
chr6 (408-506)||(19737691-19737789)
chr6 (329-506)||(20611799-20611974)
chr6 (408-506)||(34397866-34397964)
chr6 (409-494)||(30121783-30121868)
chr6 (417-506)||(30832532-30832621)
chr6 (433-506)||(4036957-4037030)
chr6 (415-508)||(235230-235325)
chr6 (362-396)||(21183650-21183684)
chr6 (476-506)||(27994778-27994808)
chr6 (408-488)||(27314177-27314258)
[»] scaffold0182 (1 HSPs)
scaffold0182 (409-499)||(23993-24083)
[»] scaffold0097 (2 HSPs)
scaffold0097 (413-506)||(38931-39024)
scaffold0097 (340-395)||(39045-39100)
[»] scaffold0018 (1 HSPs)
scaffold0018 (414-506)||(173515-173607)
[»] scaffold0070 (1 HSPs)
scaffold0070 (353-506)||(1349-1502)
[»] scaffold0003 (1 HSPs)
scaffold0003 (435-494)||(351360-351419)
[»] scaffold0902 (1 HSPs)
scaffold0902 (353-436)||(4407-4490)
[»] scaffold0227 (2 HSPs)
scaffold0227 (353-451)||(16126-16224)
scaffold0227 (475-508)||(16031-16064)
[»] scaffold0001 (1 HSPs)
scaffold0001 (417-467)||(183105-183155)


Alignment Details
Target: chr8 (Bit Score: 148; Significance: 7e-78; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 289 - 508
Target Start/End: Original strand, 34789742 - 34789961
Alignment:
Q  289 ctaagcttgcggaagagcaacccctataatatcaaccattagggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaa 388  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||| ||||| ||||||||    
T  34789742 ctaagcttgcggaagagcaacgcctataatatcaaccattagggtcatttttaagaatctggaagctcggctctataagtgaaaaaaggtccgtaataaa 34789841  T
Q  389 ataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 488  Q
    |||||||||||        |||||||| ||||||||||||||||| |||||||||||||||||   |||||||||||||||| |||||||||||||||||    
T  34789842 ataaaaatgtattttttttaaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaat 34789941  T
Q  489 cactaccgtatacatgagaa 508  Q
    ||||||||||||||||||||    
T  34789942 cactaccgtatacatgagaa 34789961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 16 - 153
Target Start/End: Original strand, 34789470 - 34789607
Alignment:
Q  16 agttggagctgtctgtctggggttgaattgaaaagttgaagagtaaggccaacgtgcttagtattaaacaaacaacaactccaccaggtaagaccaagac 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34789470 agttggagctgtctgtctggggttgaattgaaaagttgaagagtaaggccaacgtgcttagtattaaacaaacaacaactccaccaggtaagaccaagac 34789569  T
Q  116 agcaaaggtaataagatattttatttatgaatcatgtt 153  Q
    | ||||||||||||||||||||||||||||||||||||    
T  34789570 aacaaaggtaataagatattttatttatgaatcatgtt 34789607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 7944453 - 7944619
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||| |||||||||  ||||||| |||||||||||| |||||||||||||||||||        |||||||||||||| ||||||||| |||||||    
T  7944453 tacgaatcaggaagctcgattctgtaattgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaatgttttatttaaattttttaaa 7944552  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | |||||||||| | | |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7944553 aaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgag 7944619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 339 - 502
Target Start/End: Original strand, 5973037 - 5973200
Alignment:
Q  339 ttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaa 438  Q
    |||||| || ||| ||| |||||||||| ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||| ||||||    
T  5973037 ttacgattccggaggcttggctctgtaaatgaaaagaggtctgtaataaaataaaaatgtattcgttttaaaagaacaatgttctatttaaattttttaa 5973136  T
Q  439 aagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 502  Q
    ||||||||||||| | |||||||||||||||| |||||| || ||||||||| |||||||||||    
T  5973137 aagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtataca 5973200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 11290288 - 11290190
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||||||||||||    
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatgag 11290190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 340 - 491
Target Start/End: Original strand, 30674334 - 30674485
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||||||| |||||||||||||||||||||||||   ||||||||||||||| |||         ||||||||||||||||||||||| |||||||    
T  30674334 tacgaatctggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtatttttttttaaagaacaatgttctatttaaatgttttaaa 30674433  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcac 491  Q
    ||||||||| || | ||||||||||||   | ||| ||||||||||||||||    
T  30674434 agataaatataaggtgtcgtatatatgcgatacactcaaaggtgaaaatcac 30674485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 506
Target Start/End: Complemental strand, 15078930 - 15078764
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||||| | |||| |||||||||||||||||| ||| ||||||||||||||| |||        ||||||| |||||||||||||||  |||||||    
T  15078930 tacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaaatttttaaa 15078831  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||| || | |  ||||||||| | | |||||||| ||||||||||||| ||||||||||||    
T  15078830 agataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgag 15078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 15167344 - 15167512
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn--aaaagaacaatgttctatttaaatctttta 437  Q
    |||||||||| | |||| |||||||||||||||| | ||| ||||||||||||||| |||          |||||||||||||||||||||||| |||||    
T  15167344 tacgaatctgaaggctctgctctgtaagtgaaaaaaagtccgtaataaaataaaaacgtattttatttttaaaagaacaatgttctatttaaatttttta 15167443  T
Q  438 aaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||| |||| || |||||||||   | |||||||| ||||||||||||| ||||||||||||    
T  15167444 aaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgag 15167512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 331 - 506
Target Start/End: Original strand, 34048630 - 34048804
Alignment:
Q  331 ggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaa 430  Q
    |||| ||| ||||||| |||| ||||||||||||||||||||| ||  | ||||||||||||||||||          ||||||||||||||||||||||    
T  34048630 ggtcgttcctacgaatttggaggctcggctctgtaagtgaaaatagacccgtaataaaataaaaatgtttttttt---aaagaacaatgttctatttaaa 34048726  T
Q  431 tcttttaaaagataaatacaaagcgtcgtatatatgt-tg-tgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
      ||||||||||||||||||| | ||||||||||| | || | ||||||||| ||||||||||||| |||||||||||    
T  34048727 cattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatgag 34048804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 336 - 508
Target Start/End: Complemental strand, 8646381 - 8646210
Alignment:
Q  336 ttcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttt 435  Q
    |||||||||||||| ||| |||   |||||||| ||||||| ||  |||||||||||||| |||        |||||||||||||||||||||||| |||    
T  8646381 ttcttacgaatctgaaagttcgatcctgtaagtcaaaagagatccttaataaaataaaaacgtaatttttttaaaagaacaatgttctatttaaattttt 8646282  T
Q  436 taaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    |||||||||||||||| |  |||||||||||   | ||| |||| ||||||||||||||||||||||| ||||    
T  8646281 taaaagataaatacaaggtatcgtatatatg-catacacgcaaatgtgaaaatcactaccgtatacataagaa 8646210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 2952220 - 2952318
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||||| | ||||||||||  || |||||| || ||||||| |||||||||||||||||    
T  2952220 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 2952318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 30883433 - 30883335
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  30883433 aaaagagcaatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 30883335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 45475921 - 45475823
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  45475921 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgag 45475823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 39332405 - 39332502
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||||||| | ||| ||||||||||||||| | ||| |||||| |  || || ||||||||||||||||||||||||||||||||    
T  39332405 aaagaacaatgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgag 39332502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 357 - 506
Target Start/End: Complemental strand, 8103069 - 8102918
Alignment:
Q  357 ggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn--aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagc 454  Q
    |||||||||| |||||||||| || ||||||||||||||||||          |||| || |||||| ||||||||| ||||||||||||||||||| |     
T  8103069 ggctctgtaaatgaaaagaggcctataataaaataaaaatgtatttttttcttaaaataataatgttatatttaaattttttaaaagataaatacaaggt 8102970  T
Q  455 gtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |  |||||||||  || |||| |||||||||||||| |||||||||||||||    
T  8102969 gcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgag 8102918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 41677103 - 41677271
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttctatttaaatctttt-a 437  Q
    |||||||  ||| |||||||||||| |||||||||||  || |||||||||||||| |||         |||||||||||||||||||||||| |||| |    
T  41677103 tacgaattcggaggctcggctctgtgagtgaaaagagacctataataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaattttttta 41677202  T
Q  438 aaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||   ||||||||||||   | || | |||||||||||||||||| |||||||||||    
T  41677203 aaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 408 - 508
Target Start/End: Complemental strand, 41879285 - 41879185
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 507  Q
    ||||||||||||||||||||| || ||||||||||||||||||| |   ||||||||||  || || |||||||||||||| ||||||| ||||||||||    
T  41879285 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgaga 41879186  T
Q  508 a 508  Q
    |    
T  41879185 a 41879185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 409 - 508
Target Start/End: Original strand, 5860744 - 5860843
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||| ||||||||||||    
T  5860744 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaa 5860843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 42600879 - 42600788
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||| || |||||||||||||||| || | | ||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  42600879 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgag 42600788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 13534686 - 13534783
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||| ||| | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  13534686 aaaagagcaatgttctatttatattttttaaaagataaatac-aagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 13534783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 13624226 - 13624323
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||| ||| | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  13624226 aaaagagcaatgttctatttatattttttaaaagataaatac-aagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 13624323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 23606628 - 23606726
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||| ||||| |||||||||||||||||    
T  23606628 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgag 23606726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 23798261 - 23798358
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||||||| |||||||| |||||||||||||||||    
T  23798261 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgag 23798358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 10917495 - 10917397
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||| ||||||||||    
T  10917495 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccttatacatgag 10917397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 5942775 - 5942702
Alignment:
Q  433 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||||||   ||||||||| ||  || |||||||||||||||||||||||||||||||||||    
T  5942775 ttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgag 5942702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 14509983 - 14510079
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtg-aaaatcactaccgtatacatgag 506  Q
    |||||||||||||| |||||||| |||||||||| ||||| || | |||||||||| |  || |||||||| ||| |||||||||||||||||||||||    
T  14509983 aaagaacaatgttcaatttaaattttttaaaagacaaatataaggtgtcgtatatacg--gtacacccaaatgtgaaaaatcactaccgtatacatgag 14510079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 331 - 399
Target Start/End: Complemental strand, 5942848 - 5942780
Alignment:
Q  331 ggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgta 399  Q
    |||| ||| |||||||| |||||||||  |||||||||||||||||| | |||||||||||||||||||    
T  5942848 ggtcgttcctacgaatccggaagctcgattctgtaagtgaaaagaggaccgtaataaaataaaaatgta 5942780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 410 - 506
Target Start/End: Original strand, 25561496 - 25561590
Alignment:
Q  410 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| ||||||||||||||||||||| |||||||||||||| | | ||||||||||  |   ||||||| |||||||||||| |||||||||||||    
T  25561496 aagaataatgttctatttaaatctttt-aaagataaatacaaggtgccgtatatatg-cgataacccaaatgtgaaaatcactgccgtatacatgag 25561590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 409 - 451
Target Start/End: Complemental strand, 9108596 - 9108554
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaa 451  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  9108596 aaagaacaatgttctatttaaattttttaaaagataaatacaa 9108554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 37430157 - 37430255
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||   | |||| | |||| ||||| |||||||||||||||||    
T  37430157 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgag 37430255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 341 - 451
Target Start/End: Original strand, 34868108 - 34868219
Alignment:
Q  341 acgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnna-aaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||| || ||||||||| ||||||||||||||  |  |||||||||||||| |||          |||||| |||||||||||||||| |||||||    
T  34868108 acgaatctcgaggctcggctccgtaagtgaaaagagacccataataaaataaaaacgtattttttttttaaagaataatgttctatttaaattttttaaa 34868207  T
Q  440 agataaatacaa 451  Q
    ||||||||||||    
T  34868208 agataaatacaa 34868219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 502
Target Start/End: Original strand, 3048516 - 3048610
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 502  Q
    |||||| |||| | ||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | || ||||||| |||||||||||||    
T  3048516 aaaagagcaatatactatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtataca 3048610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 413 - 491
Target Start/End: Original strand, 23941095 - 23941173
Alignment:
Q  413 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcac 491  Q
    ||||||||| ||||||||| ||||||||||||||||||| | ||| |||||| |   | ||||||||| ||||||||||    
T  23941095 aacaatgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaatcac 23941173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 399
Target Start/End: Original strand, 34812701 - 34812747
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgta 399  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||||||    
T  34812701 gctcgactctgtaagtgaaaagaggtatgtcataaaataaaaatgta 34812747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 343 - 448
Target Start/End: Original strand, 38009085 - 38009191
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaa-tgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaag 441  Q
    ||||| ||| |||||| ||||||| |||||||| ||| ||||||||||||||| | |         |||||||||||||||||||||||  |||||||||    
T  38009085 gaatccggaggctcggttctgtaactgaaaagaagtccgtaataaaataaaaacttttttttttttaaaagaacaatgttctatttaaaatttttaaaag 38009184  T
Q  442 ataaata 448  Q
    |||||||    
T  38009185 ataaata 38009191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 387
Target Start/End: Original strand, 38843426 - 38843473
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataa 387  Q
    ||||||| |||| |||||||||| |||||||||||||||| |||||||    
T  38843426 tacgaatttggaggctcggctctctaagtgaaaagaggtccgtaataa 38843473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 4e-42; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 331 - 506
Target Start/End: Complemental strand, 16097188 - 16097013
Alignment:
Q  331 ggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaa 430  Q
    |||| ||| ||||||| |||| |||||||||||||||||||||| || | ||||||||||||| |||||        |||||||||||||||||||||||    
T  16097188 ggtcgttcctacgaatttggaggctcggctctgtaagtgaaaagtggcccgtaataaaataaatatgtattttgtttaaaagaacaatgttctatttaaa 16097089  T
Q  431 tcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | ||||||||||||||||||| | | |||||||||| ||| ||||||||||||||||| |||||| ||||||||||    
T  16097088 ttttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgag 16097013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 21665632 - 21665797
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||||||| | ||||||||||||||||||||||  | |||||||||||||||||||        |||||||||||||||||||||||| |||||||    
T  21665632 tacgaatctggagggtcggctctgtaagtgaaaagagacccgtaataaaataaaaatgtattttttt-aaaagaacaatgttctatttaaattttttaaa 21665730  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||  | |||||||||||||  | || | ||| ||||||||||||||||||||||||||    
T  21665731 agataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgag 21665797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 329 - 506
Target Start/End: Original strand, 24035465 - 24035642
Alignment:
Q  329 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctattta 428  Q
    |||||||||| |||||||| ||| |||||  | |||||||||||||| | | ||||||||||||||| |||        |||||||||||||||||||||    
T  24035465 agggtcattcctacgaatccggatgctcgattttgtaagtgaaaagatgcccgtaataaaataaaaacgtatttcttttaaaagaacaatgttctattta 24035564  T
Q  429 aatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||| ||||||||||||||||||| | | |||||| |||   | |||| |||||||||||||||||||| |||||||||    
T  24035565 aattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatgag 24035642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 331 - 506
Target Start/End: Complemental strand, 38400978 - 38400803
Alignment:
Q  331 ggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaa 430  Q
    |||| |||||||||||| | ||| ||||||||||||||||||||||  | | |||||||||||||  ||        | |||||||||||||||||||||    
T  38400978 ggtcgttcttacgaatccgaaagttcggctctgtaagtgaaaagagacccgcaataaaataaaaacatatattttttataagaacaatgttctatttaaa 38400879  T
Q  431 tcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | ||||||||||||||||||| | ||| ||||||||   | ||  |||||||||||||||||||||||||||||||    
T  38400878 ttttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgag 38400803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 354 - 494
Target Start/End: Original strand, 13800489 - 13800630
Alignment:
Q  354 ctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaag 453  Q
    |||| ||||||||||||||||||||  |||||||||||||||||||        |||||||||||||||||||||||| |||||||||||||||| || |    
T  13800489 ctcgactctgtaagtgaaaagaggttcgtaataaaataaaaatgtatttttttaaaaagaacaatgttctatttaaattttttaaaagataaatataagg 13800588  T
Q  454 cgtcgtatatatgttgtgcaccc-aaaggtgaaaatcactac 494  Q
     | ||||||||||   | ||||| ||||||||||||||||||    
T  13800589 tgccgtatatatgcgatacacccaaaaggtgaaaatcactac 13800630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 362 - 506
Target Start/End: Original strand, 28425660 - 28425807
Alignment:
Q  362 tgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn---aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcg 458  Q
    ||||| |||||||||||| |||||||||||||||||||           |||||||||||||||||||||||  ||||||||||||||||||| | ||||    
T  28425660 tgtaaatgaaaagaggtccgtaataaaataaaaatgtatttttttttttaaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcg 28425759  T
Q  459 tatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||  || |||||||| ||||||||||||||| |||| |||||    
T  28425760 tatatatgcagtacacccaaatgtgaaaatcactaccatatatatgag 28425807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 6965110 - 6965012
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||||| | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  6965110 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 6965012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 12337447 - 12337545
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||| ||||||||| || |||||| |||||||||| |||||||||||||||||    
T  12337447 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgag 12337545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 29939861 - 29939959
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||| ||||||||||||| | ||||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  29939861 aaaagagcaatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 29939959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 10762565 - 10762662
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||||||||| || |||||||||||||||| || | |  |||||||||| || ||||||||||||||||| |||||||||||||||||    
T  10762565 aaagagcaatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgag 10762662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 413 - 506
Target Start/End: Complemental strand, 24410535 - 24410442
Alignment:
Q  413 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  24410535 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 24410442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 416 - 508
Target Start/End: Original strand, 8907086 - 8907178
Alignment:
Q  416 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    ||||||||||||| || ||||||||||||||||||| ||| ||||||||||  || |||||| |||| ||||| |||||||||||||||||||    
T  8907086 aatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagaa 8907178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 9046133 - 9046034
Alignment:
Q  408 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||||||| || |||| |||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  9046133 aaaagaacaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 9046034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 3155320 - 3155222
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  3155320 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgag 3155222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 4505997 - 4505899
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||| ||||| |||||||||||||||||    
T  4505997 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 4505899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 343 - 490
Target Start/End: Complemental strand, 42029317 - 42029166
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnna----aaagaacaatgttctatttaaatcttttaa 438  Q
    ||||||||| |||||| | |||||||||||||||||  ||||||| |||||||||||             ||||||||||||||||||||||| ||||||    
T  42029317 gaatctggaggctcggttttgtaagtgaaaagaggttcgtaataatataaaaatgtatttttttttttttaaagaacaatgttctatttaaattttttaa 42029218  T
Q  439 aagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatca 490  Q
    |||||||||| || | ||| |||| ||||||| |||| ||||||||||||||    
T  42029217 aagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaatca 42029166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 329 - 449
Target Start/End: Original strand, 22727377 - 22727497
Alignment:
Q  329 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctattta 428  Q
    |||| ||||| |||||||  ||| ||||| | |||||||||||||||||   ||||||||||||||| |||        |||||||||||||||||||||    
T  22727377 agggccattcctacgaattcggaggctcgacgctgtaagtgaaaagaggcaagtaataaaataaaaacgtattttttttaaaagaacaatgttctattta 22727476  T
Q  429 aatcttttaaaagataaatac 449  Q
    ||| |||||||||||||||||    
T  22727477 aattttttaaaagataaatac 22727497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 408 - 503
Target Start/End: Original strand, 12134039 - 12134134
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 503  Q
    |||||||||||||||||||||||   |||||||||||||||||| |   ||||||||||   | |||||||| |||||||||||||||||||||||    
T  12134039 aaaagaacaatgttctatttaaaaaatttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaagtgaaaatcactaccgtatacat 12134134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 493
Target Start/End: Complemental strand, 10252591 - 10252431
Alignment:
Q  336 ttcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttt 435  Q
    |||||||||||| ||| ||||||| | |||||||||||||||  ||||||||||||||||  ||         |||||| ||||||| |||||||| |||    
T  10252591 ttcttacgaatcaggaggctcggcacggtaagtgaaaagaggcgtgtaataaaataaaaacatatttttttttaaagaaaaatgttcaatttaaattttt 10252492  T
Q  436 taaaagataaatacaaag---cgtcgtatatatgttgtgcacccaaaggtgaaaatcacta 493  Q
    |||||||||||||||| |   ||||||||||||  |   |||||||||||||||| |||||    
T  10252491 taaaagataaatacaaggtgtcgtcgtatatatactacacacccaaaggtgaaaaccacta 10252431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 409 - 503
Target Start/End: Original strand, 16227368 - 16227462
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 503  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | |||||||||||||  | |||| | || |||||||||||||  |||||||    
T  16227368 aaagaacaattttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactactatatacat 16227462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 353 - 438
Target Start/End: Original strand, 44914848 - 44914932
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaa 438  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||        |||||||||||||||||||||||| ||||||    
T  44914848 gctcagctctgtaagtgaaaagaggtccgtaataaaataaaaatgta-cttttttaaaagaacaatgttctatttaaattttttaa 44914932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 329 - 503
Target Start/End: Original strand, 11912676 - 11912851
Alignment:
Q  329 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnna-aaagaacaatgttctattt 427  Q
    |||| ||||||||| |||  ||| |||||||||| ||||||||||||  || |||||||||||||||  ||          |||||||||||||||||||    
T  11912676 agggccattcttacaaattcggaggctcggctctataagtgaaaagatatccgtaataaaataaaaacatatattttttttaaagaacaatgttctattt 11912775  T
Q  428 aaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 503  Q
    |||| |   |||| |||||||||||| | ||||||||||   | || |||||| ||||||||||||||||||||||    
T  11912776 aaatttaaaaaaaaataaatacaaagtgccgtatatatgcaatacatccaaagatgaaaatcactaccgtatacat 11912851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 26716232 - 26716133
Alignment:
Q  408 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||| |||||||||||| || | | | ||||||||  || ||||||||||||||||| |||||||||||||||||    
T  26716232 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 26716133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 415 - 506
Target Start/End: Original strand, 27506746 - 27506837
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||| || |||||||||||||||| || | | ||||||||||| || ||||||||||| ||||| ||||| |||||||||||    
T  27506746 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtaaaaatgactactgtatacatgag 27506837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 495
Target Start/End: Complemental strand, 34694078 - 34693991
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactacc 495  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||||| |||| ||||| ||||||    
T  34694078 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 495
Target Start/End: Complemental strand, 34716490 - 34716403
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactacc 495  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||||| |||| ||||| ||||||    
T  34716490 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 465
Target Start/End: Original strand, 11952520 - 11952643
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||||| | |||||| |||||||||||||||||  | |||||||||||||||  |         ||| |||||||||||||||||||| |||||||    
T  11952520 tacgaatctgaaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacattttttttttaaa-gaacaatgttctatttaaattttttaaa 11952618  T
Q  440 agataaatacaaagcgtcgtatatat 465  Q
    |||| ||||||||| |||||||||||    
T  11952619 agat-aatacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 485
Target Start/End: Complemental strand, 40636241 - 40636164
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaa 485  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||||| |||||||    
T  40636241 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 336 - 396
Target Start/End: Complemental strand, 12694854 - 12694794
Alignment:
Q  336 ttcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaat 396  Q
    |||||||||||| ||| ||||||||||||||||||||||||  | ||||||||||||||||    
T  12694854 ttcttacgaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaat 12694794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 506
Target Start/End: Complemental strand, 3953173 - 3953011
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 442  Q
    |||| |||| |||||||| || || |||||||||||| || ||||||| ||||||||        ||| || | |||||||||||| || ||||||||||    
T  3953173 gaatttggaggctcggctttggaaatgaaaagaggtcagtgataaaatcaaaatgtattttttttaaa-gaccgatgttctatttatattttttaaaaga 3953075  T
Q  443 taaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||| | | |||||| |||  || |||||| |||||||||| | |||||||| ||||||    
T  3953074 taaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgag 3953011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 7162887 - 7162789
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  ||  || || |||||||||| ||||||||||| |||||    
T  7162887 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgag 7162789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 442 - 506
Target Start/End: Complemental strand, 37182739 - 37182675
Alignment:
Q  442 ataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||| | ||||||||||||   | |||||||| ||||||||||||||||||||||||||    
T  37182739 ataaatacaaggtgtcgtatatatgcaatacacccaaaagtgaaaatcactaccgtatacatgag 37182675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 7742132 - 7742231
Alignment:
Q  408 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||||||| || |||| ||||||||||||||| | ||| ||||||||   | || |||||||||||||  |||| ||||| ||||||    
T  7742132 aaaagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgag 7742231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 437 - 505
Target Start/End: Original strand, 22727530 - 22727598
Alignment:
Q  437 aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 505  Q
    ||||||||||||| | | | ||||||||||  || |||||||| ||||||||||||||| |||||||||    
T  22727530 aaaagataaatactatgtgacgtatatatgcggtacacccaaaagtgaaaatcactaccatatacatga 22727598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 343 - 395
Target Start/End: Complemental strand, 37182812 - 37182760
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaa 395  Q
    ||||| ||| ||||||||||||||||||||||||  | |||||||||||||||    
T  37182812 gaatccggaggctcggctctgtaagtgaaaagagacccgtaataaaataaaaa 37182760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 362 - 398
Target Start/End: Original strand, 37622308 - 37622344
Alignment:
Q  362 tgtaagtgaaaagaggtctgtaataaaataaaaatgt 398  Q
    |||||||||||| |||| |||||||||||||||||||    
T  37622308 tgtaagtgaaaaaaggtatgtaataaaataaaaatgt 37622344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 7e-41; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 340 - 506
Target Start/End: Complemental strand, 52468462 - 52468297
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||  ||| ||||||||||||| ||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||| |||||||    
T  52468462 tacgaattcggaggctcggctctgtaggtgaaaagaggtctgtaataaaataaaaacgtattttttt-aaaagaacaatgttctatttaaattttttaaa 52468364  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| | | |||||||||||| | || ||||||||||||||||||||||||| ||||||    
T  52468363 agataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgag 52468297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 36118389 - 36118554
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||  |||||||||||| ||||||||||||||||   ||||||||||||||| |||        ||| |||||||||||||||||||| |||||||    
T  36118389 tacgaattcggaagctcggctttgtaagtgaaaagaggctcgtaataaaataaaaacgtattttttt-aaatgaacaatgttctatttaaattttttaaa 36118487  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| | |||||||||||||  | ||||||||  |||||||||||||||||||||||||    
T  36118488 agataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatgag 36118554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 340 - 502
Target Start/End: Original strand, 39329322 - 39329484
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    ||||||| |||| |||||| |||||||||||||||||||| |||||||||||||||  ||        |||||||||||||||| ||||||| |||||||    
T  39329322 tacgaatttggaggctcggttctgtaagtgaaaagaggtccgtaataaaataaaaacatattttttttaaaagaacaatgttctctttaaattttttaaa 39329421  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 502  Q
    |||||||||||| | || ||||||||||  | ||||||||| ||||||||  |||||||||||    
T  39329422 agataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaatccataccgtataca 39329484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 353 - 506
Target Start/End: Complemental strand, 47129151 - 47128998
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 452  Q
    ||||||||||| || |||||||||| | || ||||||| ||||||||        ||||||||||||||||||||| || |||||||||||||||||||     
T  47129151 gctcggctctggaaatgaaaagaggccagtgataaaatcaaaatgtattttttttaaaagaacaatgttctatttatattttttaaaagataaatacaag 47129052  T
Q  453 gcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | | ||||||||||  || |||||| |||| ||||| |||||||||||||||||    
T  47129051 gtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 47128998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 54780886 - 54780788
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  54780886 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 54780788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 408 - 508
Target Start/End: Complemental strand, 32128693 - 32128593
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 507  Q
    |||||| |||||||||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| |||||||||||||| |||    
T  32128693 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataaga 32128594  T
Q  508 a 508  Q
    |    
T  32128593 a 32128593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 328 - 490
Target Start/End: Original strand, 39655171 - 39655334
Alignment:
Q  328 tagggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaa-gaacaatgttctatt 426  Q
    ||||||| ||| ||| |||||||| ||||| ||||||| |||||||||||   ||||||||||||||| ||         |||| |||||||||||||||    
T  39655171 tagggtcgttcctacaaatctggaggctcgactctgtaggtgaaaagaggctcgtaataaaataaaaacgttctatttttaaaaagaacaatgttctatt 39655270  T
Q  427 taaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatca 490  Q
    ||||| |||||||||||||||||||||   || |||||||  || |||||||||||||||||||    
T  39655271 taaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaatca 39655334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 2790739 - 2790837
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||||||| || |||||||||||||||| || |   ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  2790739 aaaagaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 2790837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 10979009 - 10978911
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||||| | |||||||| |||||||||||||||||    
T  10979009 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgag 10978911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 411 - 505
Target Start/End: Complemental strand, 36178778 - 36178684
Alignment:
Q  411 agaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 505  Q
    |||||||||||||||||||||  |||||||||||||||||| | ||||||||||||   | |||||||| ||||||||||||||| |||||||||    
T  36178778 agaacaatgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 43455529 - 43455627
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  43455529 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 43455627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 344 - 506
Target Start/End: Complemental strand, 27112202 - 27112041
Alignment:
Q  344 aatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagat 443  Q
    |||||||| |||||| |||||||||||||||||  | |||||||||||| | ||||        ||| ||||||||||| |||||||| |||||||||||    
T  27112202 aatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtattttttt-aaacgaacaatgttcaatttaaattttttaaaagat 27112104  T
Q  444 aaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||| | | | ||||||||   | |||| ||| ||||||||||||||||||||||||||    
T  27112103 aaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgag 27112041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 38209590 - 38209687
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  38209590 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 38209687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 16845131 - 16845032
Alignment:
Q  408 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||| |||||||||||| || | ||||||||||||| || ||||||| ||||||||| |||||||||||||||||    
T  16845131 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgag 16845032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 34027681 - 34027590
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| ||||| |||||||||||    
T  34027681 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactacggtatacatgag 34027590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 420 - 506
Target Start/End: Original strand, 5128852 - 5128938
Alignment:
Q  420 ttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||| || ||||||||||||||||||| | | ||||||||||  ||||||||| |||||||||| |||||||||||||||||    
T  5128852 ttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgag 5128938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 353 - 506
Target Start/End: Complemental strand, 24397099 - 24396945
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 451  Q
    |||| |||||||||||||||||||   |||||||||||||||| |||         ||||||||||| || ||||||||| |||||||||||||||| ||    
T  24397099 gctcagctctgtaagtgaaaagagacatgtaataaaataaaaacgtatttttttttaaaagaacaatattttatttaaattttttaaaagataaatataa 24397000  T
Q  452 agcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
     | |  ||||||||||  | ||| |||||||||||||||||| ||||||||||||    
T  24396999 ggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgag 24396945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 416 - 506
Target Start/End: Original strand, 37777229 - 37777319
Alignment:
Q  416 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  37777229 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 37777319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 35779325 - 35779421
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||||||| | || ||||||||||||||||||| | ||||||||||||  || ||||||||||||||||| | |||||||||||||||    
T  35779325 aaagagcaatgttctatt-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgag 35779421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 408 - 508
Target Start/End: Complemental strand, 48209349 - 48209249
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 507  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| | ||||| || ||||||||||||||||||    
T  48209349 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgaga 48209250  T
Q  508 a 508  Q
    |    
T  48209249 a 48209249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 360 - 502
Target Start/End: Original strand, 10041949 - 10042092
Alignment:
Q  360 tctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcg 458  Q
    |||||||||||||||||||| ||| ||||||||||  |||         |||||||||||||||||||||||| ||| |||| |||||||||| | | ||    
T  10041949 tctgtaagtgaaaagaggtccgtagtaaaataaaagcgtatttttttttaaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccg 10042048  T
Q  459 tatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 502  Q
    ||| |||||  | |||| ||| ||||||||||||||||||||||    
T  10042049 tatgtatgtgatacacctaaatgtgaaaatcactaccgtataca 10042092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 408 - 503
Target Start/End: Original strand, 36362869 - 36362964
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 503  Q
    |||||||||||| ||| ||||||| ||||||||||||||||||||| | ||||||||||   | |||||||| ||| ||||||||||| |||||||    
T  36362869 aaaagaacaatgctctgtttaaattttttaaaagataaatacaaagtgccgtatatatgcaatacacccaaatgtggaaatcactaccatatacat 36362964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 336 - 451
Target Start/End: Complemental strand, 24614135 - 24614019
Alignment:
Q  336 ttcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnna--aaagaacaatgttctatttaaatct 433  Q
    |||||||||||||||| | || |||||||||||||||||||| | |||||||||||||| ||||           ||||||||||||||||||||||| |    
T  24614135 ttcttacgaatctggaggttcagctctgtaagtgaaaagaggcccgtaataaaataaaa-tgtatttttttttttaaagaacaatgttctatttaaattt 24614037  T
Q  434 tttaaaagataaatacaa 451  Q
    ||||||||||||||||||    
T  24614036 tttaaaagataaatacaa 24614019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 32915494 - 32915396
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||| || |||||| |||| ||||| | |||||||||||||||    
T  32915494 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgag 32915396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 34768572 - 34768670
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || |||||| |||||||||| | |||||||||||||||    
T  34768572 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccagaggtgaaaatgattaccgtatacatgag 34768670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 506
Target Start/End: Original strand, 54083185 - 54083338
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 452  Q
    |||||||||||  | |||||||||||| || ||||||| |||| |||        |||| ||||||| |||||||| || |||||||||||||||| ||     
T  54083185 gctcggctctgagaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctatttatattttttaaaagataaatataag 54083284  T
Q  453 gcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | | ||||||||||  || ||||||||| | ||||| |||||||||||||||||    
T  54083285 gtgccgtatatatgcggtacacccaaagataaaaatgactaccgtatacatgag 54083338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 417 - 505
Target Start/End: Complemental strand, 37514759 - 37514671
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 505  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| || |||||||||| ||||||||||||||||    
T  37514759 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatga 37514671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 348 - 399
Target Start/End: Complemental strand, 5893181 - 5893130
Alignment:
Q  348 tggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgta 399  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  5893181 tggaggctcggctctgtaagtgaaaagaggtccgtaataaaataaaaatgta 5893130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 1105632 - 1105543
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| || ||||||||||||||||||| |  |||||||||||  || |||| | |||||||||| |||||| ||||||||||    
T  1105632 atgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcggtacacctagaggtgaaaatgactaccatatacatgag 1105543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 413 - 506
Target Start/End: Original strand, 2135324 - 2135417
Alignment:
Q  413 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||| ||||||||||||||||||| | ||||||||||||   | || |||||||| || ||||||| |||||| |||||    
T  2135324 aacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacatccaaaggtaaacatcactatcgtatatatgag 2135417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 4167914 - 4167987
Alignment:
Q  433 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||||| | | ||||||||||   | |||||||||||||||||||||||| ||||||||||    
T  4167914 ttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgag 4167987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 503
Target Start/End: Complemental strand, 13460306 - 13460221
Alignment:
Q  418 tgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 503  Q
    ||||||||||| || ||||||||||||||||||| | ||||||||||||  ||  ||||| | |||||||| ||||||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacat 13460221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 502
Target Start/End: Original strand, 51691913 - 51692009
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacc--caaaggtgaaaatcactaccgtataca 502  Q
    |||||| ||||||||||||||||| ||||||||||||||||||| | | ||||||||||  || ||||   ||| ||||||||||||||| ||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacaccaaaaaaagtgaaaatcactaccatataca 51692009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 488
Target Start/End: Original strand, 16922327 - 16922407
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 488  Q
    |||||| |||||||||||||| || |||||||||||||||| |||| ||||||||||||  ||   |||||||||||||||    
T  16922327 aaaagagcaatgttctatttatattttttaaaagataaatataaagtgtcgtatatatgcagtatccccaaaggtgaaaat 16922407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 411 - 506
Target Start/End: Complemental strand, 15735196 - 15735106
Alignment:
Q  411 agaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| |||||||||||||||||||  |||||||||||     | |||| |||  ||||||||| |||||||||||||||    
T  15735196 agaacagtgttctatttaaattttttaaaagataaatacaagacgtcgtatata-----tacaccaaaaaatgaaaatcattaccgtatacatgag 15735106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 450
Target Start/End: Original strand, 30507120 - 30507162
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaataca 450  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  30507120 aaaagaacaatgttctatttaaattttttaaaagataaataca 30507162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 35465215 - 35465118
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| |||||| || ||||| |||||||||| || | | ||||||||||  || |||| ||| |||||||| |||||||||||||||||    
T  35465215 aaaagaacaatgttatatttatattttttacaagataaataaaaggtg-cgtatatatgcggtacacctaaaagtgaaaataactaccgtatacatgag 35465118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 37744916 - 37745006
Alignment:
Q  417 atgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||| |||| |||||||||||| || | |||| |||||||   | || ||||||||||||||||||||||||||| ||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtatacttgag 37745006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 40089600 - 40089527
Alignment:
Q  433 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||| || | | ||||||||||  || || |||||||||||||| |||||||||||||||||    
T  40089600 ttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 40089527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 415 - 486
Target Start/End: Original strand, 10428202 - 10428273
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaa 486  Q
    |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| ||||||||    
T  10428202 caatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaa 10428273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 19498611 - 19498515
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||  ||||||  || || |||||||||||||| ||||| |||||||||||    
T  19498611 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccg--tatatgcggtacagccaaaggtgaaaatgactactgtatacatgag 19498515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 408 - 485
Target Start/End: Complemental strand, 17679509 - 17679432
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaa 485  Q
    |||||| |||| ||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||    
T  17679509 aaaagagcaatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 422 - 506
Target Start/End: Complemental strand, 40217327 - 40217243
Alignment:
Q  422 ctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||| |||||||||||||||| || | ||||||||||||   | || |||||| ||||||||| || | ||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaatcattagcatatacatgag 40217243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 505
Target Start/End: Complemental strand, 45656279 - 45656187
Alignment:
Q  413 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 505  Q
    ||||||||| ||||||||| ||||||||||||||| ||| | ||| ||||||||   |  | ||||| ||||||||||| | |||||||||||    
T  45656279 aacaatgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatgcgataaatccaaatgtgaaaatcacgaacgtatacatga 45656187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 451
Target Start/End: Original strand, 9578662 - 9578705
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 451  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  9578662 aaaagagcaatgttctatttatattttttaaaagataaatacaa 9578705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 399
Target Start/End: Original strand, 11906832 - 11906891
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgta 399  Q
    |||||||  ||| |||||||| | |||||||||||||| | |||||||||||||||||||    
T  11906832 tacgaattcggaggctcggctatataagtgaaaagaggcccgtaataaaataaaaatgta 11906891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 499
Target Start/End: Original strand, 16882393 - 16882484
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtat 499  Q
    |||| |||||||||||||||| |  |||||||||||||||| || | | ||| |||||   || |||| |||||||||||| ||||||||||    
T  16882393 aaaaaaacaatgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtat 16882484  T

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Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 24969482 - 24969448
Alignment:
Q  472 cacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||| |||||||||||||||||    
T  24969482 cacccaaaggtgaaaatgactaccgtatacatgag 24969448  T

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Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 463
Target Start/End: Original strand, 23508515 - 23508564
Alignment:
Q  415 caatgttctattta-aatcttttaaaagataaatacaaagcgtcgtatat 463  Q
    |||||||||||||| ||| ||||||||||||||||||| | |||||||||    
T  23508515 caatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

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Target: scaffold0012 (Bit Score: 83; Significance: 4e-39; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 356 - 506
Target Start/End: Original strand, 206436 - 206586
Alignment:
Q  356 cggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcg 455  Q
    ||||||||||||||||||||||| ||||||||||||||||||||         |||||| |||||||||||||||| || |||||||||||||||| | |    
T  206436 cggctctgtaagtgaaaagaggtttgtaataaaataaaaatgtatttttttttaaagaagaatgttctatttaaattttgtaaaagataaatacaaggtg 206535  T
Q  456 tcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||  || ||||||| |||||||||||||||||||||||||||    
T  206536 tcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgag 206586  T

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Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 340 - 506
Target Start/End: Complemental strand, 45758679 - 45758511
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn--aaaagaacaatgttctatttaaatctttta 437  Q
    ||||||||  || ||||||||||||||||||||||||||| | |||||||||||||||||          |||||||||||||||||||||||| |||||    
T  45758679 tacgaatccagaggctcggctctgtaagtgaaaagaggtccgaaataaaataaaaatgtatattttttttaaaagaacaatgttctatttaaatttttta 45758580  T
Q  438 aaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||| ||| | || ||||||||||| | || ||||||||||||||||||||||||||||||||    
T  45758579 aaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgag 45758511  T

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Target: chr1; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 408 - 508
Target Start/End: Complemental strand, 38853637 - 38853537
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 507  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||| | ||||||||||||||||  | |||||||||||||||||||||||||||||||||    
T  38853637 aaaagaacagtgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatgaga 38853538  T
Q  508 a 508  Q
    |    
T  38853537 a 38853537  T

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Target: chr1; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 362 - 506
Target Start/End: Original strand, 43235720 - 43235866
Alignment:
Q  362 tgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatctttta--aaagataaatacaaagcgtcgt 459  Q
    |||||||||||||||| |||||||||||||||||||||         |||||| |||||||||||||||| ||||   ||||||||||||||   |||||    
T  43235720 tgtaagtgaaaagaggcctgtaataaaataaaaatgtatttttttctaaagaaaaatgttctatttaaatttttttttaaagataaatacaagatgtcgt 43235819  T
Q  460 atatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||||||    
T  43235820 atatatgatgtacacccaaaggtgaaaatcactatcgtatacatgag 43235866  T

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Target: chr1; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 340 - 506
Target Start/End: Complemental strand, 5533495 - 5533329
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatctttt-aa 438  Q
    |||||||| ||| ||| | ||||||||||||||||||  | |||||||||||||||||||        ||||||||||| |||||||||||| |||| ||    
T  5533495 tacgaatccggaggcttgactctgtaagtgaaaagagacccgtaataaaataaaaatgtattttttt-aaaagaacaatattctatttaaatttttttaa 5533397  T
Q  439 aagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||| |||| | | |||||||||| ||| ||  |||||||||||||||||||||||||||||||    
T  5533396 aagataaacacaaggtgccgtatatatgatgtacaatcaaaggtgaaaatcactaccgtatacatgag 5533329  T

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Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 38546966 - 38547132
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    ||||||| |||| | ||||||||| |||||||||| || | ||||||||||||||| | |         ||||| ||||||||||||||||| |||||||    
T  38546966 tacgaatttggaggatcggctctgcaagtgaaaaggggcccgtaataaaataaaaaggaatttttttttaaagatcaatgttctatttaaattttttaaa 38547065  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| | | ||||||||||| || |||||||| ||||||||||||| | ||||||||||    
T  38547066 agataaatacaaggtgccgtatatatgtggtacacccaaatgtgaaaatcactatcatatacatgag 38547132  T

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Target: chr1; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 27559745 - 27559654
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  27559745 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 27559654  T

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Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 5316795 - 5316697
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  5316795 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 5316697  T

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Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 23185542 - 23185444
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  23185542 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgag 23185444  T

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Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 44655856 - 44655758
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||||| |||| ||||| |||||||||||||||||    
T  44655856 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 44655758  T

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Target: chr1; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 353 - 506
Target Start/End: Complemental strand, 17169126 - 17168973
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 452  Q
    ||||||||||| || |||||||||||| || ||||||| |||| |||        |||| | |||||||||||||| || |||||||||||||||| ||     
T  17169126 gctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctatttatattttttaaaagataaatataag 17169027  T
Q  453 gcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | || |||||||||  || ||||||||||||||||| |||||| ||||||||||    
T  17169026 gtgttgtatatatgcggtacacccaaaggtgaaaatgactaccatatacatgag 17168973  T

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Target: chr1; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 349 - 506
Target Start/End: Original strand, 41697076 - 41697233
Alignment:
Q  349 ggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaata 448  Q
    |||||||||||||||  | |||||||||||| || ||||||| |||| |||        |||||| | |||||||||||| || ||||||||||||||||    
T  41697076 ggaagctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcgatgttctatttatattttttaaaagataaata 41697175  T
Q  449 caaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||  |||||||||||  || || ||| | |||||||| |||||||||||||||||    
T  41697176 caaagtatcgtatatatgcagtacatccagaagtgaaaatgactaccgtatacatgag 41697233  T

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Target: chr1; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 39134650 - 39134819
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn--aaaagaacaatgttctatttaaatctttt- 436  Q
    |||||||| ||| ||||||||| ||||||||||||||    ||||||||||||||| |||          |||||||||||||||||||||||| ||||     
T  39134650 tacgaatccggaggctcggctccgtaagtgaaaagagactcgtaataaaataaaaacgtattttttttttaaaagaacaatgttctatttaaatttttta 39134749  T
Q  437 aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||| | |  |||||||||   | ||||||||||||| ||||||||| |||||||||||    
T  39134750 aaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T

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Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 413 - 506
Target Start/End: Original strand, 9173026 - 9173119
Alignment:
Q  413 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || || |||||||||||||| |||||||||||||||||    
T  9173026 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 9173119  T

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Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 413 - 506
Target Start/End: Original strand, 9181008 - 9181101
Alignment:
Q  413 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || || |||||||||||||| |||||||||||||||||    
T  9181008 aacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 9181101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 408 - 508
Target Start/End: Complemental strand, 33170874 - 33170774
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 507  Q
    |||| ||||||||| ||||||||| ||||||||  ||||||||| | || |||||||||  || |||| || ||||||||||||||||||||||||||||    
T  33170874 aaaaaaacaatgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatgaga 33170775  T
Q  508 a 508  Q
    |    
T  33170774 a 33170774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 5027664 - 5027566
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||| |||| |||||    
T  5027664 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgag 5027566  T

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Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 14146415 - 14146317
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| || ||||||| |||||||||||||||||    
T  14146415 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 14146317  T

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Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 50881545 - 50881447
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || || | | |||||||||| ||||| |||||||||||    
T  50881545 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgag 50881447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 4971617 - 4971714
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||||||||| || ||||||||||||||||||| |   ||||||||||  || |||||| | |||||||| |||||||||||||||||    
T  4971617 aaagagcaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgag 4971714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 502
Target Start/End: Complemental strand, 6771897 - 6771812
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 502  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||    
T  6771897 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtataca 6771812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 16140161 - 16140072
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| || ||||||||||||||||||| | || |||||||||  || |||| | |||||||||| |||||||||||||||||    
T  16140161 atgttctatttatattttttaaaagataaatacaaggtgttgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgag 16140072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 409 - 508
Target Start/End: Complemental strand, 26804059 - 26803963
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    ||||||||||| | ||||||||| |||||||||||||||||||   ||||||||||||   | |||   |||||||||||||||||||||||||||||||    
T  26804059 aaagaacaatgctatatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatgagaa 26803963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 416 - 505
Target Start/End: Original strand, 40501796 - 40501885
Alignment:
Q  416 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 505  Q
    |||| |||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||| ||||| ||||||||||||||||    
T  40501796 aatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatga 40501885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 410 - 502
Target Start/End: Original strand, 1366878 - 1366970
Alignment:
Q  410 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 502  Q
    |||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||| ||||||| |||||||||||||    
T  1366878 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtataca 1366970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 10925951 - 10926050
Alignment:
Q  408 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||| |||||||||| | |||| |||| |||||||||| | | ||||||||||   |||| |||||| |||||||||||||||||||||||||    
T  10925951 aaaagaacaatattctatttaagtatttttaaaaaataaatacaatgtgccgtatatatgagatgcatccaaagatgaaaatcactaccgtatacatgag 10926050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 3406533 - 3406435
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| |  |||||||||| |||||||||||||||||    
T  3406533 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgag 3406435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 3440287 - 3440385
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| |  |||||||||| |||||||||||||||||    
T  3440287 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgag 3440385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 506
Target Start/End: Complemental strand, 6221859 - 6221695
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    ||||||||||||  ||||| ||||||| |||||||||  | |||||||||||||||| ||        ||| |||||||||||||||||||| |||||||    
T  6221859 tacgaatctggagactcggttctgtaaatgaaaagagacccgtaataaaataaaaatttattttttttaaa-gaacaatgttctatttaaat-ttttaaa 6221762  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| | | |||||||| |  || || | ||| |||||||||| || |||||| |||||    
T  6221761 agataaatacaatgtgccgtatataagcggtacatcaaaatgtgaaaatcattatcgtatatatgag 6221695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 488
Target Start/End: Complemental strand, 6889726 - 6889646
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 488  Q
    |||||| |||||||||||||| || |||||||||||||||||||||  |||||||||||  || || ||| ||||||||||    
T  6889726 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6889646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 488
Target Start/End: Complemental strand, 6891572 - 6891492
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 488  Q
    |||||| |||||||||||||| || |||||||||||||||||||||  |||||||||||  || || ||| ||||||||||    
T  6891572 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaat 6891492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 19955825 - 19955734
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||| || |||||||||||||||| || |   ||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  19955825 caatgatctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgag 19955734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 502
Target Start/End: Original strand, 21740935 - 21741029
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 502  Q
    |||||| |||||||||||||  || ||||||||||||||||||| | | ||||||||||   | |||||| |||||||||| |||||| ||||||    
T  21740935 aaaagagcaatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccatataca 21741029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 50146411 - 50146313
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||||||||||  |||| |||||||||| ||| | | ||| |||||||  |  |||||||||| ||||||| |||| ||||||||||    
T  50146411 aaaagaacaatgttctatttaaactttttgaaagataaatgcaaggtgccgtgtatatgtgatagacccaaaggtaaaaatcattaccctatacatgag 50146313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 506
Target Start/End: Original strand, 51607445 - 51607536
Alignment:
Q  416 aatgttctatttaaatcttttaaaagataaatacaaagcgtc-gtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||| || |||||||||||||||| || | | | |||||||||  || |||||||| |||||||| |||||||||||||||||    
T  51607445 aatgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgag 51607536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 498
Target Start/End: Complemental strand, 35392384 - 35392295
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgta 498  Q
    ||||||| |||||| ||||||||| ||||||  ||||||||||| | | ||||||||||  ||  | ||||||||||||||||||||||||    
T  35392384 aaaagaataatgttttatttaaattttttaag-gataaatacaaggtgccgtatatatgcggtatatccaaaggtgaaaatcactaccgta 35392295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 451
Target Start/End: Original strand, 17322621 - 17322664
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 451  Q
    ||||||||||||||||||||| || |||| ||||||||||||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaa 17322664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 451
Target Start/End: Original strand, 22865459 - 22865502
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 451  Q
    |||||| |||||||||||||| || |||||||||||||||||||    
T  22865459 aaaagagcaatgttctatttatattttttaaaagataaatacaa 22865502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1590 (Bit Score: 81; Significance: 7e-38; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 353 - 505
Target Start/End: Original strand, 202 - 354
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 452  Q
    ||||||||||| ||||||| ||||| |  ||||||||||||||||||        |||||||||||||||||||||||| |||||||||||||||||||     
T  202 gctcggctctgcaagtgaatagaggcccataataaaataaaaatgtatttttattaaaagaacaatgttctatttaaattttttaaaagataaatacaag 301  T
Q  453 gcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 505  Q
    | ||||||||||||  || |||||||| |||||||||||||||||||||||||    
T  302 gtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatga 354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 1e-33; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 345 - 502
Target Start/End: Complemental strand, 25855591 - 25855435
Alignment:
Q  345 atctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagata 444  Q
    ||||||| |||||| | ||||| |||||| ||| | |||||||||||||||||||         ||||||||||||||||||||||| ||||||||||||    
T  25855591 atctggaggctcggttatgtaaatgaaaaaaggcccgtaataaaataaaaatgtatgtttttttaaagaacaatgttctatttaaattttttaaaagata 25855492  T
Q  445 aatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 502  Q
    | ||||| | ||||||||||||| |||||||||||| |||||||||||||||||||||    
T  25855491 a-tacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtataca 25855435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 340 - 508
Target Start/End: Complemental strand, 49393263 - 49393097
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||| ||| |||||||| |||||||||||| ||    |||||||||||||||||||         ||||||||||||||| ||||||| |||||||    
T  49393263 tacgaatccggaggctcggct-tgtaagtgaaaaaagactcgtaataaaataaaaatgtatttttttttaaagaacaatgttctctttaaattttttaaa 49393165  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    |||||||||||| |||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||||    
T  49393164 agataaatacaaggcgtcgtatatatg-tgtacacccaaaggtaaaaattactaccgtatacatgagaa 49393097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 360 - 493
Target Start/End: Original strand, 32319108 - 32319239
Alignment:
Q  360 tctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgt 459  Q
    |||||||||||||| |||||||||||||||||||||||||         |||||| |||||||||||||||| ||||||||||||||||||||| || ||    
T  32319108 tctgtaagtgaaaataggtctgtaataaaataaaaatgtaagttttt--aaagaataatgttctatttaaattttttaaaagataaatacaaagtgttgt 32319205  T
Q  460 atatatgttgtgcacccaaaggtgaaaatcacta 493  Q
    |||||||  || ||||||||||||||||| ||||    
T  32319206 atatatgcggtacacccaaaggtgaaaattacta 32319239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 353 - 506
Target Start/End: Original strand, 8073282 - 8073435
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 452  Q
    ||||||||||| || |||||||||||| || ||||||| |||| |||        ||||||  ||||||||||||| || |||||||||||||||||||     
T  8073282 gctcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtaatgttctatttatattttttaaaagataaatacaag 8073381  T
Q  453 gcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | ||||||||||||  || |||||||| |||||||| |||||||||||||||||    
T  8073382 gtgtcgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgag 8073435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 408 - 500
Target Start/End: Complemental strand, 8420433 - 8420341
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtata 500  Q
    ||||||| |||||||||||||||| ||||||||||||||||||| | | |||||||||||||| |||||||| |||||||||||| |||||||    
T  8420433 aaaagaataatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacccaaatgtgaaaatcactgccgtata 8420341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 21582878 - 21582780
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| |||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  21582878 aaaagaacaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 21582780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 37168474 - 37168376
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||| |||||||||||||||| || |||||||||||||||| || | | ||||||||||| ||  |||||||||||||||| |||||||||||||||||    
T  37168474 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgag 37168376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 54619202 - 54619300
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  54619202 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 54619300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 409 - 506
Target Start/End: Complemental strand, 790042 - 789945
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||| |||||||||||| |||||||  |||||||||| | ||| |||||||||||| ||||||||||| |||||||| ||| ||||||||||    
T  790042 aaagaacaatcttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacccaaaggtaaaaatcaccaccatatacatgag 789945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 415 - 508
Target Start/End: Original strand, 27078575 - 27078668
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    |||||||||||||| || ||||||||||||||||||||| | ||||||||||  ||  ||||| |||||||||| |||||||||||||||||||    
T  27078575 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaa 27078668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 415 - 508
Target Start/End: Original strand, 27084372 - 27084465
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    |||||||||||||| || ||||||||||||||||||||| | ||||||||||  ||  ||||| |||||||||| |||||||||||||||||||    
T  27084372 caatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgagaa 27084465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 358 - 506
Target Start/End: Original strand, 3953845 - 3953993
Alignment:
Q  358 gctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtc 457  Q
    |||||| || |||||||||| | || ||||||| ||||||||        ||||||||||||||||||||| || ||||||||||||||||||| | | |    
T  3953845 gctctggaaatgaaaagaggccagtgataaaattaaaatgtattttttttaaaagaacaatgttctatttatattttttaaaagataaatacaaggtgcc 3953944  T
Q  458 gtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||  || |||||| |||||||||| |  ||||||||||||||    
T  3953945 gtatatatgcggtacacccagaggtgaaaatgaaaaccgtatacatgag 3953993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 408 - 508
Target Start/End: Original strand, 53506883 - 53506983
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 507  Q
    |||| |||||||||||||||| || |||||||||||||||| || |   ||||||||||  || ||||||||||||||||| ||||||||||||||||||    
T  53506883 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaga 53506982  T
Q  508 a 508  Q
    |    
T  53506983 a 53506983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 362 - 494
Target Start/End: Complemental strand, 26279694 - 26279563
Alignment:
Q  362 tgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtat 461  Q
    ||||||||||||||||||  || ||||||||||| |||        |||||||||||||||||||||||| |||||||||||||||| || | |||||||    
T  26279694 tgtaagtgaaaagaggtccatagtaaaataaaaacgtattttttt-aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtat 26279596  T
Q  462 atatgttgtgcacccaaaggtgaaaatcactac 494  Q
    |||||   | ||||||||| |||||||||||||    
T  26279595 atatgcaatacacccaaagatgaaaatcactac 26279563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 34290635 - 34290733
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||| |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| ||||||||||| |||||    
T  34290635 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgag 34290733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 408 - 503
Target Start/End: Original strand, 54407157 - 54407252
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 503  Q
    |||| |||||||||||||||| || |||||||||||||||| || | | ||||||||||  || || |||||||||||||| ||||||||||||||    
T  54407157 aaaaaaacaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat 54407252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 38681092 - 38681190
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||| ||||  || || ||| |||||||||| |||||||||||||||||    
T  38681092 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgag 38681190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 506
Target Start/End: Complemental strand, 44708576 - 44708486
Alignment:
Q  416 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||| || |||||||||||||||| || | | |||||||||   || ||||||||||||||||| |||||||||||||||||    
T  44708576 aatgttctatttatattttttaaaagataaatataaggtgccgtatatatccggtacacccaaaggtgaaaatgactaccgtatacatgag 44708486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 54574826 - 54574924
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||||||||||| ||| |||| |||||||||| |   ||||||||||  || |||||||| || |||||||||||| ||||||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacccaaaagtaaaaatcactaccatatacatgag 54574924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 506
Target Start/End: Complemental strand, 47467782 - 47467693
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||   | |||||| |||||||||| |||||||||||||||||    
T  47467782 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgag 47467693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 343 - 506
Target Start/End: Original strand, 43207172 - 43207334
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 442  Q
    |||| |||| |||||||||||  | |||||||||| | || ||||| |||||| |||        |||||| |||||||||||||| || ||||||||||    
T  43207172 gaatttggaggctcggctctgggaatgaaaagaggccagtgataaattaaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaaga 43207271  T
Q  443 taaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| || | | ||||||||||  || ||  ||||||||||||| |||||||||||||||||    
T  43207272 taaatataaggtgccgtatatatgcggtaca-tcaaaggtgaaaatgactaccgtatacatgag 43207334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 415 - 506
Target Start/End: Original strand, 50939239 - 50939330
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||| || |||||||||||||||| || | | ||||||||| | || ||||||||||| ||||| |||||||||||||||||    
T  50939239 caatgatctatttatattttttaaaagataaatataaggtgccgtatatatatggtacacccaaaggtaaaaatgactaccgtatacatgag 50939330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 36716024 - 36716122
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||  || ||||||||| ||||    
T  36716024 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgag 36716122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 42098908 - 42098810
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  ||  || || |||||||||| |||||||||||||||||    
T  42098908 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgag 42098810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 18372590 - 18372488
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatat----gttgtgcacccaaaggtgaaaatcactaccgtatacat 503  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | |||||||||||    |  || ||| || |||||||||| ||||||||||||||    
T  18372590 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcgcgcggtacacacagaggtgaaaatgactaccgtatacat 18372491  T
Q  504 gag 506  Q
    |||    
T  18372490 gag 18372488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 508
Target Start/End: Original strand, 28689307 - 28689460
Alignment:
Q  355 tcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagc 454  Q
    ||||||||  |||||||||||||   |||||||||||||||  ||        |||| || |||||||||||||||| ||  ||||||||||||||| |     
T  28689307 tcggctctccaagtgaaaagaggctcgtaataaaataaaaagatattttttttaaaaaaagaatgttctatttaaattttcaaaaagataaatacaaggt 28689406  T
Q  455 gtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    | ||||||||||   |  | |||||||||||||||||| |||||||||||||||    
T  28689407 gccgtatatatgcgatatatccaaaggtgaaaatcactgccgtatacatgagaa 28689460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 355 - 506
Target Start/End: Complemental strand, 36606125 - 36605974
Alignment:
Q  355 tcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaa-gataaatacaaag 453  Q
    ||||||||| || |||||||||||| || ||||||| |||| |||        || ||| |||||||||||||| || |||||||| ||||||||||| |    
T  36606125 tcggctctggaaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaatagagcaatgttctatttatattttttaaaaagataaatacaagg 36606026  T
Q  454 cgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
     | ||||||||||  || |||||| || ||||||| |||||||||||||||||    
T  36606025 tgccgtatatatgcggtacacccagagatgaaaat-actaccgtatacatgag 36605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 503
Target Start/End: Original strand, 9878686 - 9878781
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 503  Q
    |||||| |||| ||||||||| || |||||||||||||||| || | |  |||||||||  || ||||||||||||||||| |||| |||||||||    
T  9878686 aaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatgcggtacacccaaaggtgaaaatgactatcgtatacat 9878781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 340 - 466
Target Start/End: Original strand, 23641248 - 23641375
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttctatttaaatcttttaa 438  Q
    |||||||||||| |||||| |||||| ||||||||||  | || |||||||||||| |||         ||||||||||  ||||||||| || ||||||    
T  23641248 tacgaatctggaggctcggttctgtaggtgaaaagagacccgtgataaaataaaaacgtatttttttttaaaagaacaacattctatttatattttttaa 23641347  T
Q  439 aagataaatacaaagcgtcgtatatatg 466  Q
    ||||||||||||| | ||||||||||||    
T  23641348 aagataaatacaatgtgtcgtatatatg 23641375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 466
Target Start/End: Complemental strand, 42453511 - 42453453
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 466  Q
    ||||||||||||||| |||||||| ||||||||||||||||||| | ||| ||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatg 42453453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 344 - 505
Target Start/End: Complemental strand, 52374828 - 52374666
Alignment:
Q  344 aatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttctatttaaatcttttaaaaga 442  Q
    |||||||| ||||  || ||||||||||||||  || ||||||||||||||| |||         |||||||||||||||||||||||| ||||   | |    
T  52374828 aatctggatgctcaactttgtaagtgaaaagaaatccgtaataaaataaaaacgtatttttttttaaaagaacaatgttctatttaaatttttttttaaa 52374729  T
Q  443 taaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 505  Q
    ||||||||| | |||||||| |||   | || | ||||| |||||||||||||||||||||||    
T  52374728 taaatacaatgtgtcgtatagatgcgatacatctaaaggagaaaatcactaccgtatacatga 52374666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 53149313 - 53149411
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| | |||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| || || | ||||| |||||||||||||||||    
T  53149313 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgag 53149411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 50258622 - 50258680
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatg 466  Q
    |||||| | |||||||||||| || |||||||| |||||||||| | ||||||||||||    
T  50258622 aaaagagcgatgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatg 50258680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 6e-32; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 2530826 - 2530991
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||||| | | | ||||||||||||||||||||| | |||||||||||||||||||        ||||||| |||||||||||||| | |||||||    
T  2530826 tacgaatctgaaggtttggctctgtaagtgaaaagaggcccgtaataaaataaaaatgtatttttcttaaaagaa-aatgttctatttaagttttttaaa 2530924  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| | |||||||||||   || || |||||||||||||||||||| |||||||||||    
T  2530925 agataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgag 2530991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 36868872 - 36868970
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||||||||| | ||||||||||||||||||| | ||||||||||||| || |||||||| ||||||||||||||||||||||||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatgag 36868970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 329 - 506
Target Start/End: Complemental strand, 10407644 - 10407467
Alignment:
Q  329 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctattta 428  Q
    |||||| ||| ||||||||| || | |||| ||| ||||||||||||||||  |||||||||||||| |||        |||||||||||||||||||||    
T  10407644 agggtcgttcctacgaatctagaggttcggttctataagtgaaaagaggtccataataaaataaaaaagtattttttttaaaagaacaatgttctattta 10407545  T
Q  429 aatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||| |||||||||||||| |||| | |||||| ||||||||| || | ||| |||||||| |||||||||| ||||||    
T  10407544 aattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatgag 10407467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 343 - 506
Target Start/End: Original strand, 26718880 - 26719043
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 442  Q
    ||||| ||| |||||| |||||||||||||||||  | ||||||||||||||| |||         |||||| |||||||||||||||  ||||||||||    
T  26718880 gaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatttaaaatttttaaaaga 26718979  T
Q  443 taaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||| ||||||||||||   | ||| ||||||||||||||||||||| |||||||||    
T  26718980 taaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26719043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 343 - 506
Target Start/End: Original strand, 26988624 - 26988787
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 442  Q
    ||||| ||| |||||| |||||||||||||||||  | ||||||||||||||| |||         |||||| |||||||||||||||  ||||||||||    
T  26988624 gaatccggaggctcggttctgtaagtgaaaagagacccgtaataaaataaaaacgtatttttttttaaagaataatgttctatttaaaatttttaaaaga 26988723  T
Q  443 taaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||| ||||||||||||   | ||| ||||||||||||||||||||| |||||||||    
T  26988724 taaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatgag 26988787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 506
Target Start/End: Complemental strand, 34426075 - 34425909
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||||| | |||||| |||||||||||||| ||   ||||||||||||||||||||        |||||||||||||||||||| ||| |||||||    
T  34426075 tacgaatctgaaggctcggttctgtaagtgaaaaaagacatgtaataaaataaaaatgtatcttttttaaaagaacaatgttctatttcaattttttaaa 34425976  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| | | |||||||||||  | |||| |||| | ||||||| |||||||||||||||    
T  34425975 agataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgag 34425909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 353 - 506
Target Start/End: Complemental strand, 33037941 - 33037786
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn--aaaagaacaatgttctatttaaatcttttaaaagataaataca 450  Q
    ||||||||||||||  |||||||||   |||||||||||||||||||          |||||||||||||| ||||||||| ||||||||||||||||||    
T  33037941 gctcggctctgtaaccgaaaagaggctcgtaataaaataaaaatgtatatattttttaaaagaacaatgttttatttaaattttttaaaagataaataca 33037842  T
Q  451 aagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |    ||||||||||||||| |||||||||||||||| || |||||||||||||||    
T  33037841 agatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgag 33037786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 353 - 508
Target Start/End: Original strand, 38869304 - 38869459
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 452  Q
    |||||||||||  | |||||||||||| || ||||||| |||| |||        |||||| |||||||||||||| || |||||||||||||||| ||     
T  38869304 gctcggctctgggaatgaaaagaggtcagttataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatataag 38869403  T
Q  453 gcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    | ||||||||||||  || ||||||||||||||||| |||||||||||||||||||    
T  38869404 gtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaa 38869459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 357 - 506
Target Start/End: Complemental strand, 2412239 - 2412094
Alignment:
Q  357 ggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgt 456  Q
    ||||||||||||||||||||||| |||||||||||| | | |          ||||||||||||||||||||||| |||||||| |||||||||||| ||    
T  2412239 ggctctgtaagtgaaaagaggtccgtaataaaataatatttt----ttttttaaagaacaatgttctatttaaattttttaaaaaataaatacaaagtgt 2412144  T
Q  457 cgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||   |||| ||||| |||||||||||||| |||||||||||    
T  2412143 cgtatatatgcgatgcatccaaatgtgaaaatcactactgtatacatgag 2412094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 14318382 - 14318479
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||  | || |||||  |||||||||||||||||||||||||    
T  14318382 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgag 14318479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 340 - 508
Target Start/End: Original strand, 40794254 - 40794423
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttctatttaaatcttttaa 438  Q
    |||||||  ||| |||||||||||||||||||||||||   ||||||||||||||| ||          |||||||||||||| ||||||||| ||||||    
T  40794254 tacgaattcggaggctcggctctgtaagtgaaaagaggctcgtaataaaataaaaacgtttttttttttaaaagaacaatgttttatttaaattttttaa 40794353  T
Q  439 aagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    |||| |||||||||| | |||| |||| |  | |||| ||||||||||||||||||||||||||||||||    
T  40794354 aagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatgagaa 40794423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 329 - 506
Target Start/End: Original strand, 11242236 - 11242412
Alignment:
Q  329 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctattta 428  Q
    |||||| ||| || ||||| ||| ||||||||||||||||||||||||    ||||||||||||||| |||        |||||||||||||||||||||    
T  11242236 agggtcgttcctatgaatccggaggctcggctctgtaagtgaaaagagactcgtaataaaataaaaacgtattctttt-aaaagaacaatgttctattta 11242334  T
Q  429 aatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | | ||||||||||||||||||||  |  ||||||||||  | || |||||| || ||||||||||||||||||||||    
T  11242335 atttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgag 11242412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 2024638 - 2024736
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||||||||||| |||| |||||||||||||| | | |||||||||||  | ||||||||| |||||||||||||| ||||||||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatgag 2024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 329 - 500
Target Start/End: Original strand, 22648655 - 22648824
Alignment:
Q  329 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaa-taaaaatgtannnnnnnnaaaagaacaatgttctattt 427  Q
    |||||| ||| |||||||| |||  |||| ||||||||||||||||| | ||||||||||| ||||||||||        ||  ||||||||||||||||    
T  22648655 agggtcgttcctacgaatccggagactcg-ctctgtaagtgaaaagaagcctgtaataaaaataaaaatgtatattttttaa--gaacaatgttctattt 22648751  T
Q  428 aaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtata 500  Q
    |||| ||||||||||||||||||| | ||||||||||||| |  || |||||||||| ||||||||| |||||    
T  22648752 aaattttttaaaagataaatacaatgtgtcgtatatatgtggcacatccaaaggtgacaatcactactgtata 22648824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 408 - 508
Target Start/End: Original strand, 22986554 - 22986654
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 507  Q
    |||||| |||||||||||| | || |||||||||| |||||||||| ||||||||||||  || |||||| |||||||||| ||||||||||||||||||    
T  22986554 aaaagagcaatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatatgcggtacacccataggtgaaaatgactaccgtatacatgaga 22986653  T
Q  508 a 508  Q
    |    
T  22986654 a 22986654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 360 - 506
Target Start/End: Original strand, 1366474 - 1366620
Alignment:
Q  360 tctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgt 459  Q
    ||||||||| |||||||||| |||| |||||||||| |||        |||||||||||||||||||||||| ||||| |||||||||||||   || ||    
T  1366474 tctgtaagtaaaaagaggtccgtaaaaaaataaaaacgtattttttttaaaagaacaatgttctatttaaattttttataagataaatacaagatgtggt 1366573  T
Q  460 atatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||   | |||| ||| |||||||||||||||||||| |||||    
T  1366574 atatatgcgatacacctaaatgtgaaaatcactaccgtatatatgag 1366620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 34756362 - 34756460
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  34756362 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 34756460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 408 - 505
Target Start/End: Original strand, 28822338 - 28822435
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 505  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| ||||||||||||||||    
T  28822338 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatga 28822435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 9364388 - 9364297
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  9364388 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 9364297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 415 - 506
Target Start/End: Original strand, 16198797 - 16198888
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||   | ||||||||||||||||| |||||||||||||||||    
T  16198797 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 16198888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 27079115 - 27079017
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| |||||||||||| ||||| |||||||||||    
T  27079115 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgag 27079017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 408 - 508
Target Start/End: Original strand, 36187875 - 36187975
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 507  Q
    |||||| | |||||||||||| || |||||||| |||||||||| | | ||||||||||  || |||||| |||||||||| ||||||||||||||||||    
T  36187875 aaaagagcgatgttctatttatattttttaaaatataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgaga 36187974  T
Q  508 a 508  Q
    |    
T  36187975 a 36187975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 502
Target Start/End: Complemental strand, 2274994 - 2274900
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtataca 502  Q
    |||||| | |||||||||||| || ||||||||||||||||||| |  |||||||||||  || |||||| |||||||||| |||||||||||||    
T  2274994 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtatcgtatatatgcagtacacccagaggtgaaaatgactaccgtataca 2274900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 16592070 - 16592168
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || || |||||||||||||||  | ||||||||||||  || |||||| |||||||||| ||||||||||| |||||    
T  16592070 aaaagagcaatgttctatttatattttctaaaagataaatacagggtgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatatatgag 16592168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 23284058 - 23284156
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||||||   ||||||||| | ||||||||||||  || ||||||||| ||||||| |||||||||||||||||    
T  23284058 aaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggtacacccaaagatgaaaatgactaccgtatacatgag 23284156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 30854433 - 30854335
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||| || |||||||||| |||| ||||||||||||    
T  30854433 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgag 30854335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 31194608 - 31194705
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  ||  ||||| |||||||||| |||||||||||||||||    
T  31194608 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtaaacccagaggtgaaaat-actaccgtatacatgag 31194705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 15480094 - 15480183
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| || |||||||||||||||||||   ||||||||||||  || |||||| |||||||||| |||||||||| ||||||    
T  15480094 atgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgag 15480183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 448
Target Start/End: Original strand, 35080700 - 35080806
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    ||||||||| || ||||| ||||||||||||||||||| | |||||||||||||||  ||        |||||||||||||| ||||||||| |||||||    
T  35080700 tacgaatctagaggctcgactctgtaagtgaaaagagggccgtaataaaataaaaa--tattttttttaaaagaacaatgttttatttaaattttttaaa 35080797  T
Q  440 agataaata 448  Q
    |||||||||    
T  35080798 agataaata 35080806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 355 - 503
Target Start/End: Complemental strand, 10543829 - 10543682
Alignment:
Q  355 tcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaagc 454  Q
    |||| ||| ||||||||||||| || |||||||||||||||||||        ||| ||| ||||||| | |||||| |||||||||||||||| || |     
T  10543829 tcggttctataagtgaaaagagatccgtaataaaataaaaatgtattttttttaaa-gaataatgttccacttaaattttttaaaagataaatataaggt 10543731  T
Q  455 gtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacat 503  Q
    |  |||||||||   | || |||||||||||||||||||||||||||||    
T  10543730 gatgtatatatgcgatacatccaaaggtgaaaatcactaccgtatacat 10543682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 506
Target Start/End: Complemental strand, 19523293 - 19523205
Alignment:
Q  418 tgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||| ||||||||||    
T  19523293 tgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgag 19523205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 499
Target Start/End: Original strand, 40389539 - 40389623
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtat 499  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || || |||||||||||||| ||||||||||    
T  40389539 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtat 40389623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 409 - 488
Target Start/End: Complemental strand, 7338102 - 7338023
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 488  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | ||||||||||||  || |||| ||||||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaat 7338023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 506
Target Start/End: Original strand, 16799331 - 16799421
Alignment:
Q  416 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||| || |||||||| ||||||| || | | ||||||||||  || ||||||||||||||||| | |||||||||||||||    
T  16799331 aatgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgag 16799421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 416 - 506
Target Start/End: Complemental strand, 24395835 - 24395745
Alignment:
Q  416 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||| ||||||||||||||||||| | || ||||||||    | || ||||||||||||||||| |||||||| |||||    
T  24395835 aatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatacaatacatccaaaggtgaaaatcaccaccgtatagatgag 24395745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 451
Target Start/End: Complemental strand, 606258 - 606215
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 451  Q
    |||||||||||||||||||||||| |||||||||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaa 606215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 41911614 - 41911711
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| | |||| | |||||||||| |||||||| | |||||||||| |  || |||||||| || |||||||||| |||||| |||||    
T  41911614 aaagaacaatgttcaacttaatttttttaaaagagaaatacaaggtgtcgtatataagcggtacacccaaaagtaaaaatcactatcgtatatatgag 41911711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 7671022 - 7670930
Alignment:
Q  415 caatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| || |||| |||||||||||| || | | ||||||| |   || ||||||||||||||||| |||||||||||||||||    
T  7671022 caatgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgag 7670930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 422 - 506
Target Start/End: Complemental strand, 27924172 - 27924088
Alignment:
Q  422 ctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||| || |||||||||||||||| || | | ||||||||||  || || |||||||| ||||| |||||||||||||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgag 27924088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 451
Target Start/End: Complemental strand, 27530587 - 27530544
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaa 451  Q
    |||||||||||||||||||||||| ||||||||||| |||||||    
T  27530587 aaaagaacaatgttctatttaaattttttaaaagattaatacaa 27530544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 31881430 - 31881527
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||  | | ||||||||||  |  || ||| || ||||||| |||||||||||||||||    
T  31881430 aaaagagcaatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatgag 31881527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 453
Target Start/End: Complemental strand, 22875041 - 22875001
Alignment:
Q  413 aacaatgttctatttaaatcttttaaaagataaatacaaag 453  Q
    |||||| |||||||||||| |||||||||||||||||||||    
T  22875041 aacaatattctatttaaattttttaaaagataaatacaaag 22875001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 340 - 398
Target Start/End: Complemental strand, 27530666 - 27530608
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgt 398  Q
    ||||||| | || |||||| ||| |||||||||||||| | ||||||||||||||||||    
T  27530666 tacgaatttagaggctcggttctataagtgaaaagaggcccgtaataaaataaaaatgt 27530608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1320 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold1320
Description:

Target: scaffold1320; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 506
Target Start/End: Complemental strand, 1526 - 1360
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||||| | |||| |||||||||||||||||| ||| ||||||||||||||| |||        ||||||| |||||||||||||||  |||||||    
T  1526 tacgaatctgaaggctctgctctgtaagtgaaaagaagtccgtaataaaataaaaacgtattttttttaaaagaataatgttctatttaaaatttttaaa 1427  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||| || | |  ||||||||| | | |||||||| ||||||||||||| ||||||||||||    
T  1426 agataaatataaggtgctgtatatatgctatacacccaaatgtgaaaatcactatcgtatacatgag 1360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 2e-29; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 329 - 506
Target Start/End: Original strand, 2611180 - 2611358
Alignment:
Q  329 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnn-aaaagaacaatgttctattt 427  Q
    |||||| ||| || ||||| ||| |||||| |||| |||||||||||||  |||||||||||||||| |||         ||||||||||||||||||||    
T  2611180 agggtcgttcctatgaatccggaggctcggttctgcaagtgaaaagaggcttgtaataaaataaaaaagtatttttttttaaaagaacaatgttctattt 2611279  T
Q  428 aaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||| ||||||||||||||||||| | ||||||||||||  || ||| ||| |||||||||||| || |||||||||||    
T  2611280 aaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacacaatggtgaaaatcacaactgtatacatgag 2611358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 340 - 506
Target Start/End: Complemental strand, 23859245 - 23859079
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    ||||||| |||| ||||| ||||||||||||||||||  ||||||||||||||||| |||        || |||| |||||||||||||||| |||||||    
T  23859245 tacgaatttggaggctcgactctgtaagtgaaaagagacctgtaataaaataaaaacgtattttgtttaagagaataatgttctatttaaattttttaaa 23859146  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| |   ||||||||||   | ||||||||| ||||||| |||||||||||||||||    
T  23859145 agataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatgag 23859079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 343 - 506
Target Start/End: Original strand, 27237357 - 27237519
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 442  Q
    |||| |||| ||||| |||| ||||||||||||| || |||||||||||| || |||        |||||||||||||||||||||||| ||||||||||    
T  27237357 gaatttggaggctcgtctctataagtgaaaagagatccgtaataaaataacaa-gtattttttttaaaagaacaatgttctatttaaattttttaaaaga 27237455  T
Q  443 taaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||| | || ||||||||||  || | | ||||||||||||||||| ||||||||||||    
T  27237456 taaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgag 27237519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 340 - 498
Target Start/End: Complemental strand, 38971424 - 38971267
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    ||||||||| ||  ||||||| |||||||||||||||  | |||||||||||||||||||        |||||| |||| || ||||||||| |||||||    
T  38971424 tacgaatctagagactcggctttgtaagtgaaaagagacccgtaataaaataaaaatgtattttttttaaaagatcaatattttatttaaat-ttttaaa 38971326  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgta 498  Q
    |||||||||||| | |||||||||||||| | |||| ||| ||||||||||||||||||    
T  38971325 agataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgta 38971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 9021799 - 9021896
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||| | |||||||||| ||||||||||||||||||| | | ||||||||||  || |||||||||||||||||||||||||||||||||||    
T  9021799 aaagaacaatttgctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatgag 9021896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 340 - 500
Target Start/End: Complemental strand, 23744968 - 23744808
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    ||||||| |||| |||| ||||| |||||||||||||| | |||| ||||||||||||||        ||||||||||||||||| |||||| |||||||    
T  23744968 tacgaatttggaggctcagctctataagtgaaaagaggcccgtaaaaaaataaaaatgtatttttttaaaaagaacaatgttctaattaaattttttaaa 23744869  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtata 500  Q
    |||||||||||| | | || |||||||  || |||| |||| | |||||||||||||||||    
T  23744868 agataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtata 23744808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 410 - 506
Target Start/End: Original strand, 36902924 - 36903020
Alignment:
Q  410 aagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||||||||| |||||| ||||||||||||   |||||||||||||||| |||| |||||||||||||| ||| |||||||||||    
T  36902924 aagaacaatgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatgag 36903020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 409 - 500
Target Start/End: Original strand, 6765680 - 6765771
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtata 500  Q
    ||||||||||||||||||||||| ||||||||||||||||||| | |||||||||| |  || || ||||||||||||||||||||||||||    
T  6765680 aaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtata 6765771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 23020415 - 23020579
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||||||| || ||| |||||||||||||||||||| |||||||||||||||||||        |||||||||| |||  ||||| || |||||||    
T  23020415 tacgaatctggaggc-cggttctgtaagtgaaaagaggtccgtaataaaataaaaatgtattttttttaaaagaacaacgtttcatttagattttttaaa 23020513  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||| || | || |||||||||     ||| |||||||||||||||||||||||||||||||    
T  23020514 agataaatataaggtgttgtatatatg-cacacactcaaaggtgaaaatcactaccgtatacatgag 23020579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 353 - 506
Target Start/End: Complemental strand, 29077379 - 29077226
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 452  Q
    |||||||||||  | |||||||||||| || ||||||| |||| |||        |||||| |||||||||||||| || |||||||||||||||||||     
T  29077379 gctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaag 29077280  T
Q  453 gcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | ||||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  29077279 gtgtcgtatatatgcggtacaccaagaggtgaaaatgactaccgtatacatgag 29077226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 7398555 - 7398457
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||||||||||| |||| |||||||||||||| | | | |||||||||  | |||| ||||||||||||||||||| ||||||||||    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgag 7398457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 48983842 - 48983940
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  48983842 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgag 48983940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 343 - 451
Target Start/End: Original strand, 12419428 - 12419536
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 442  Q
    ||||| ||| |||||||| |||||||||||||||| | |||||||||||| || |||        |||||||||||||||||||||||| ||||||||||    
T  12419428 gaatccggaggctcggctttgtaagtgaaaagaggcccgtaataaaataacaacgtattttttttaaaagaacaatgttctatttaaattttttaaaaga 12419527  T
Q  443 taaatacaa 451  Q
    |||||||||    
T  12419528 taaatacaa 12419536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 408 - 508
Target Start/End: Original strand, 18776764 - 18776864
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgaga 507  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| | |||||||| ||||||||||||||||||    
T  18776764 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgaga 18776863  T
Q  508 a 508  Q
    |    
T  18776864 a 18776864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 8171537 - 8171635
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| || ||||||| |||||||||||||||||    
T  8171537 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 8171635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 20091279 - 20091377
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||| ||||||| |||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  20091279 aaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 20091377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 344 - 495
Target Start/End: Original strand, 21763523 - 21763672
Alignment:
Q  344 aatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagat 443  Q
    |||||||| |||| | ||| ||||| ||||||| || ||||||||||||||| |||         |||||||| |||||||||||||| |||||||||||    
T  21763523 aatctggaggctctgttctataagtaaaaagagatccgtaataaaataaaaacgtattttttt--aaagaacattgttctatttaaattttttaaaagat 21763620  T
Q  444 aaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactacc 495  Q
    ||||||||||  |||||||||||   | |||| ||| |||||||||||||||    
T  21763621 aaatacaaagtatcgtatatatgcgatacaccaaaaagtgaaaatcactacc 21763672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 416 - 506
Target Start/End: Complemental strand, 20153297 - 20153207
Alignment:
Q  416 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| ||||||||| ||||||||||||||||||||| || |||||||||   |  |||||||| ||||||||||| |||||||||||||    
T  20153297 aatgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatgag 20153207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 36891682 - 36891584
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||| ||||||||||||| || ||||||| ||| ||||||| | || ||||||||   || || ||||||||||||||||||||||||||||||||    
T  36891682 aaaagaataatgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgag 36891584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 38414874 - 38414972
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| ||| |||||||||  || |||||||||||||||| || | | ||||||||||| || ||||||||||||||||| ||||| |||||||||||    
T  38414874 aaaagagcaacgttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgag 38414972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 415 - 508
Target Start/End: Original strand, 10329415 - 10329508
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    |||||||||||||| || |||||||||||||||| || | | ||||||||||  |   |||||||||||||||| |||||||||||||||||||    
T  10329415 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgaggaaaacccaaaggtgaaaatgactaccgtatacatgagaa 10329508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 12596294 - 12596383
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| || |||| |||||||||||||| | | ||||||||||| || |||||| |||||||||| |||||||||| ||||||    
T  12596294 atgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgag 12596383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 413 - 506
Target Start/End: Original strand, 24525688 - 24525781
Alignment:
Q  413 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||| || |||||||||||||||| || | | ||| ||||||  || |||||||| |||||||| |||||||||||||||||    
T  24525688 aacaatgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgag 24525781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 353 - 506
Target Start/End: Original strand, 9014712 - 9014858
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 452  Q
    |||||||||| |||| ||||||| | | |||||||||||||| ||||         || || |||| || ||||||||| || ||||||||||||||||     
T  9014712 gctcggctctataagggaaaagaagcccgtaataaaataaaactgtatttttttttaatgatcaatcttttatttaaattttgtaaaagataaatacaat 9014811  T
Q  453 gcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    | |||||||||||       ||||||||||||||||||||||||||||||||||    
T  9014812 gtgtcgtatatat-------acccaaaggtgaaaatcactaccgtatacatgag 9014858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 10955588 - 10955490
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| | |||||||||||| || |||||||||||||||| || | | ||||||||||  || ||| || |||||||||| |||||||||||||||||    
T  10955588 aaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgag 10955490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 340 - 506
Target Start/End: Complemental strand, 12981496 - 12981332
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||| ||| | |||| |||||| |||||||||||   ||||||||||||||||||         ||||||| |||||||||||||| | |||||||    
T  12981496 tacgaatccggaggttcggttctgtaggtgaaaagaggctcgtaataaaataaaaatgt--tttttataaaagaagaatgttctatttaatttttttaaa 12981399  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| |   | |||||| |  || ||| ||||||||||||||||||| ||||| |||||    
T  12981398 agataaatacaaggttccatatatacgcggtacacacaaaggtgaaaatcactactgtatatatgag 12981332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 433 - 506
Target Start/End: Original strand, 23551094 - 23551167
Alignment:
Q  433 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||| || | ||||||||||||  || || |||||||||||||| |||||||||||||||||    
T  23551094 ttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgag 23551167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 329 - 394
Target Start/End: Original strand, 26917650 - 26917715
Alignment:
Q  329 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaa 394  Q
    |||||| ||||||||||||| || ||| | ||||||||||||||||||||| ||||||||||||||    
T  26917650 agggtcgttcttacgaatctagaggcttgactctgtaagtgaaaagaggtccgtaataaaataaaa 26917715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 408 - 488
Target Start/End: Complemental strand, 26254097 - 26254017
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 488  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || ||||||||| |||||||    
T  26254097 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaat 26254017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 343 - 506
Target Start/End: Complemental strand, 8239856 - 8239693
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaaga 442  Q
    |||| |||| ||||||||||| || |||||||||| |  | ||||||| |||| |||        ||||||  ||||||||||||| || |||||||| |    
T  8239856 gaatttggaggctcggctctggaaatgaaaagaggccaatgataaaatgaaaacgtattttttttaaaagagtaatgttctatttatattttttaaaaaa 8239757  T
Q  443 taaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| || | | ||||||||||| || |||||||| |||||||| | ||||||||| |||||    
T  8239756 taaatataatgtgccgtatatatgtggtacacccaaatgtgaaaatgattaccgtatatatgag 8239693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 455 - 506
Target Start/End: Original strand, 17800266 - 17800317
Alignment:
Q  455 gtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||| |||||||| ||||||||||||||||||| ||||||    
T  17800266 gtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatgag 17800317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 19692198 - 19692100
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | | ||||||||  || |||| |||||||||||| |||  ||||||||||||    
T  19692198 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgag 19692100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 465
Target Start/End: Original strand, 9014177 - 9014233
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatat 465  Q
    ||||||||||||| ||||||||| ||||||||||||||||||| | || ||||||||    
T  9014177 aaagaacaatgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 506
Target Start/End: Complemental strand, 18201306 - 18201143
Alignment:
Q  341 acgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaa 440  Q
    ||||||| ||| ||||||||||| |||||||| || ||| |||||||||||||||| ||        ||| |||||||| ||||||||||| ||||||||    
T  18201306 acgaatccggaggctcggctctgcaagtgaaa-gatgtccgtaataaaataaaaatatattttttt-aaacgaacaatgatctatttaaattttttaaaa 18201209  T
Q  441 gataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
     ||||||||||   | | ||||||||| || |||| || ||||||||||  |||| || |||||||    
T  18201208 tataaatacaagatgccatatatatgtggtacacctaagggtgaaaatcgttaccttacacatgag 18201143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 506
Target Start/End: Original strand, 47984974 - 47985066
Alignment:
Q  415 caatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| || |||| |||||| ||||| || | | ||||||||||  || ||||||||||||||||| || ||||||||||||||    
T  47984974 caatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgag 47985066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 409 - 488
Target Start/End: Original strand, 33162338 - 33162417
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 488  Q
    ||||| ||||| |||||||| || ||||||||||||||||||| | | ||||||||||  || |||| ||||||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaat 33162417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 28749813 - 28749716
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||| ||||||||| || ||| ||||||||||||||| | | ||||||||||  || ||| || | |||||||| |||||||||||||||||    
T  28749813 aaaagagcaatattctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatgag 28749716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 472 - 506
Target Start/End: Complemental strand, 25010473 - 25010439
Alignment:
Q  472 cacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||| |||||||||||||||||    
T  25010473 cacccaaaggtgaaaatgactaccgtatacatgag 25010439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 64; Significance: 9e-28; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 343 - 506
Target Start/End: Complemental strand, 40257 - 40091
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaa-gaacaatgttctatttaaatctttt--aaa 439  Q
    ||||||||| | || |||||||||||||||||||||  |||||||||||||||||||        |||| |||||||||||||||||| | ||||  |||    
T  40257 gaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctatttaatttttttttaaa 40158  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| | | ||||| |||||||| ||||| |||||||||||||| | ||||||||||||    
T  40157 agataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgag 40091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 343 - 506
Target Start/End: Complemental strand, 138317 - 138151
Alignment:
Q  343 gaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaa-gaacaatgttctatttaaatctttt--aaa 439  Q
    ||||||||| | || |||||||||||||||||||||  |||||||||||||||||||        |||| |||||||||||||||||| | ||||  |||    
T  138317 gaatctggaggttctgctctgtaagtgaaaagaggttcgtaataaaataaaaatgtattttttttaaaaagaacaatgttctatttaatttttttttaaa 138218  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| | | ||||| |||||||| ||||| |||||||||||||| | ||||||||||||    
T  138217 agataaatacaaggtgccgtatttatgttgtacaccctaaggtgaaaatcacaatcgtatacatgag 138151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 106642 - 106544
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||||||| || |||||||||||||||| || | ||||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  106642 aaaagaacaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 106544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 340 - 506
Target Start/End: Original strand, 230792 - 230956
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaa 439  Q
    |||||||| |||||||||| |||||||| ||||||||| | |||||||||  ||||||||        |||||||||||||||||||||||| | |||||    
T  230792 tacgaatccggaagctcggatctgtaagggaaaagaggcccgtaataaaa--aaaatgtatattttttaaaagaacaatgttctatttaaatttgttaaa 230889  T
Q  440 agataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||  || | || |||||||||   |  ||||||||||||||||||||||| ||||||||||    
T  230890 agataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgag 230956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 9e-25; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 420 - 506
Target Start/End: Original strand, 21183686 - 21183772
Alignment:
Q  420 ttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| |||||||||||||||||||||   ||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgag 21183772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 13727398 - 13727496
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  13727398 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 13727496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 20711719 - 20711817
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  20711719 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 20711817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 21479601 - 21479503
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||||||||| |||||||||||||||||    
T  21479601 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgag 21479503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 344 - 506
Target Start/End: Original strand, 2477520 - 2477681
Alignment:
Q  344 aatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagat 443  Q
    |||||||| |||||| |||||||||||||||||  | |||||||||||| | ||||        ||| ||||||||||| |||||||| |||||||||||    
T  2477520 aatctggaggctcggttctgtaagtgaaaagagacccgtaataaaataagattgtattttttt-aaacgaacaatgttcaatttaaattttttaaaagat 2477618  T
Q  444 aaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||| | | | ||||||||   | |||| ||| ||||||||||||||||||||||||||    
T  2477619 aaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgag 2477681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 21280652 - 21280554
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||| |||| ||||| |||||||||||||||||    
T  21280652 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgag 21280554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 27788687 - 27788785
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||| ||||||||| || |||||||||||||||| || | | ||||||||||  || ||||||||||||||||| |||||||||||||||||    
T  27788687 aaaagagcaattttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 27788785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 416 - 506
Target Start/End: Complemental strand, 33774216 - 33774126
Alignment:
Q  416 aatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||||||| |||||||| |||||||||||||||||    
T  33774216 aatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgag 33774126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 409 - 506
Target Start/End: Original strand, 1155849 - 1155946
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||| |||||||||||||| || ||||||||||||||||||| | ||| ||||||||  || || ||| |||||||||| |||||||||||||||||    
T  1155849 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatgag 1155946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 24711007 - 24711096
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| || ||||||||||||||||||| | | ||||||||||| || ||| || |||||||||| |||||||||||||||||    
T  24711007 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgag 24711096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 412 - 500
Target Start/End: Complemental strand, 6159541 - 6159453
Alignment:
Q  412 gaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtata 500  Q
    ||||||||||||||||| || ||||||||||||||||||| | ||||||||||||  || ||  |||||||| ||||||||||||||||    
T  6159541 gaacaatgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtacattcaaaggtggaaatcactaccgtata 6159453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 415 - 506
Target Start/End: Complemental strand, 28075883 - 28075792
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||| || |||||||||||||||| || | | ||||||||||   | ||||||||||||||||| |||||||||||||||||    
T  28075883 caatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgag 28075792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 415 - 505
Target Start/End: Complemental strand, 17354054 - 17353964
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatga 505  Q
    |||||||||||||| || |||||||||||||||| || | ||||||||||||  || |||||||| |||||||| |||| |||||||||||    
T  17354054 caatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatga 17353964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 408 - 506
Target Start/End: Original strand, 19737691 - 19737789
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || |||| |||||||||||||| | | ||||||||||  || |||| | |||||||||| |||||||||||||||||    
T  19737691 aaaagagcaatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgag 19737789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 329 - 506
Target Start/End: Complemental strand, 20611974 - 20611799
Alignment:
Q  329 agggtcattcttacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctattta 428  Q
    |||||| ||| |||||||  ||| ||||||||||||||||||||||||| |  ||| |||||||||| ||           ||||  ||||||||| |||    
T  20611974 agggtcgttcctacgaattcggaggctcggctctgtaagtgaaaagaggcccataaaaaaataaaaacgtttttttttc--aagataaatgttctactta 20611877  T
Q  429 aatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||| ||||||| ||||||||||| | |||||||||||      || ||||||||||||||||||||||||||||||||    
T  20611876 aattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgag 20611799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 408 - 506
Target Start/End: Complemental strand, 34397964 - 34397866
Alignment:
Q  408 aaaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||||| || ||||||||||||||||||| | | ||||||||||  || |||| |||||| ||||| |||| |||| |||||||    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgag 34397866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 409 - 494
Target Start/End: Complemental strand, 30121868 - 30121783
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactac 494  Q
    ||||||||||||| ||||||||| |||||||| |||||||||| | ||| ||||||||   | || ||||||||||||||||||||    
T  30121868 aaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatgcgatacatccaaaggtgaaaatcactac 30121783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 417 - 506
Target Start/End: Original strand, 30832532 - 30832621
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||| || |||||||| ||||||||||   | ||||||||||| || |||||| || ||||||| |||||||||| ||||||    
T  30832532 atgttctatttacattttttaaaaaataaatacaagatgccgtatatatgtggtacacccagagatgaaaatgactaccgtatgcatgag 30832621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 506
Target Start/End: Complemental strand, 4037030 - 4036957
Alignment:
Q  433 ttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||| |||||||||||| | | ||||||||| | || ||||||||||| || |||||||||||||| |||||    
T  4037030 ttttaagagataaatacaaggtgccgtatatatatggtacacccaaaggtaaagatcactaccgtatatatgag 4036957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 508
Target Start/End: Original strand, 235230 - 235325
Alignment:
Q  415 caatgttctatttaaatcttttaaaagataaatacaaagcgtcg--tatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    ||||| |||||||| || |||||||||||||||| || | | ||  |||||||   || ||||||||| ||||||| |||||||||||||||||||    
T  235230 caatgatctatttatattttttaaaagataaatataaggtgccgggtatatataccgtacacccaaagatgaaaatgactaccgtatacatgagaa 235325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 362 - 396
Target Start/End: Original strand, 21183650 - 21183684
Alignment:
Q  362 tgtaagtgaaaagaggtctgtaataaaataaaaat 396  Q
    |||||||||||||||||| ||||||||||||||||    
T  21183650 tgtaagtgaaaagaggtcagtaataaaataaaaat 21183684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 506
Target Start/End: Complemental strand, 27994808 - 27994778
Alignment:
Q  476 caaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||||||||||||||||||    
T  27994808 caaaggtgaaaatcactaccgtatacatgag 27994778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 488
Target Start/End: Original strand, 27314177 - 27314258
Alignment:
Q  408 aaaagaacaatgttctatttaaatctttt-aaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaat 488  Q
    |||||| |||||||||||||| || |||| ||||||||||||||| | | ||||||||||  || ||| || ||||||||||    
T  27314177 aaaagagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaat 27314258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 409 - 499
Target Start/End: Original strand, 23993 - 24083
Alignment:
Q  409 aaagaacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtat 499  Q
    |||||||||| |||||||||||| ||||||||||||||||||| | ||||||||||||  || |||||||| |||||||||| ||||||||    
T  23993 aaagaacaatattctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtat 24083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 54; Significance: 9e-22; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 413 - 506
Target Start/End: Complemental strand, 39024 - 38931
Alignment:
Q  413 aacaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    ||||||||||||||||||| ||||||||||||||||||| | ||||||||||||   | ||| |||| |||||||||||||||||||| |||||    
T  39024 aacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtatatatgag 38931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 340 - 395
Target Start/End: Complemental strand, 39100 - 39045
Alignment:
Q  340 tacgaatctggaagctcggctctgtaagtgaaaagaggtctgtaataaaataaaaa 395  Q
    |||||||||||| |||||  ||||||||| |||||||||| |||||||||||||||    
T  39100 tacgaatctggaggctcgattctgtaagtaaaaagaggtccgtaataaaataaaaa 39045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 414 - 506
Target Start/End: Original strand, 173515 - 173607
Alignment:
Q  414 acaatgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
    |||||||||||||||||| ||||||||||||||||||| |   ||||||||||   | ||||||||||| |||||||||||||||||| ||||    
T  173515 acaatgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtatacgtgag 173607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 353 - 506
Target Start/End: Complemental strand, 1502 - 1349
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaaa 452  Q
    |||||||||||  | |||||||||||| || ||||||| |||| |||        |||||| || ||||||||||| || |||||||||||||||||||     
T  1502 gctcggctctgggaatgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcactgttctatttatattttttaaaagataaatacaag 1403  T
Q  453 gcgtcgtatatatgttgtgcacccaaaggtgaaaatcactaccgtatacatgag 506  Q
      | ||||||||||  || |||||| || ||||||| |||||||||||||||||    
T  1402 ctgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgag 1349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 435 - 494
Target Start/End: Original strand, 351360 - 351419
Alignment:
Q  435 ttaaaagataaatacaaagcgtcgtatatatgttgtgcacccaaaggtgaaaatcactac 494  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||||||||| ||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaatcgctac 351419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0902 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0902
Description:

Target: scaffold0902; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 4407 - 4490
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatctttt 436  Q
    ||||||||||| ||||||| ||||| | |||||||||||||||||||        |||||||||||||||||||||||| ||||    
T  4407 gctcggctctgcaagtgaatagaggcccgtaataaaataaaaatgtatttttattaaaagaacaatgttctatttaaatttttt 4490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 353 - 451
Target Start/End: Complemental strand, 16224 - 16126
Alignment:
Q  353 gctcggctctgtaagtgaaaagaggtctgtaataaaataaaaatgtannnnnnnnaaaagaacaatgttctatttaaatcttttaaaagataaatacaa 451  Q
    ||||| ||||||||||||||| |  |||||||||||||||||| |||         |||||  |||||||||||||||| |||||||||||||||||||    
T  16224 gctcgactctgtaagtgaaaaaaattctgtaataaaataaaaacgtatttctttttaaagagaaatgttctatttaaattttttaaaagataaatacaa 16126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 508
Target Start/End: Complemental strand, 16064 - 16031
Alignment:
Q  475 ccaaaggtgaaaatcactaccgtatacatgagaa 508  Q
    |||||| |||||||||||||||||||||||||||    
T  16064 ccaaagatgaaaatcactaccgtatacatgagaa 16031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 467
Target Start/End: Complemental strand, 183155 - 183105
Alignment:
Q  417 atgttctatttaaatcttttaaaagataaatacaaagcgtcgtatatatgt 467  Q
    |||||||||||| || |||||||||||||||||||||  ||||||||||||    
T  183155 atgttctatttatattttttaaaagataaatacaaagtatcgtatatatgt 183105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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