View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17862_high_16 (Length: 254)
Name: NF17862_high_16
Description: NF17862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17862_high_16 |
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Alignment Details
Target: chr3 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 24 - 245
Target Start/End: Original strand, 7645783 - 7646004
Alignment:
| Q |
24 |
gtcatgagctaacaaatgcaacttaatttgaatttccgtcaaaggatatgaaaattaaagaaaggataattattcttctatatgacatttctgcccaaac |
123 |
Q |
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| T |
7645783 |
gtcatgagctaacaaatgcaacttaatttgaatttccgtcaaaggatatgaaaattaaagaaaggataattattcttctatatgacatttctacccaaac |
7645882 |
T |
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| Q |
124 |
aaaatcttctatgtgacataaacgtaaaggaattgtttcatttaaaaccaaagtaccagtcaaaaaataatgtaaaccaaagaaaagtaatggttagcca |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7645883 |
aaaatcttctatgtgacataaacgtaaaggaattgtttcatttaaaaccaaagtaccagtcaaaaaataatgtaaaccaaagaaaagtaatggttagcca |
7645982 |
T |
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| Q |
224 |
atatttatttttatcttcatct |
245 |
Q |
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| |||||||||||||||||||| |
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| T |
7645983 |
acatttatttttatcttcatct |
7646004 |
T |
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