View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17863_low_20 (Length: 224)
Name: NF17863_low_20
Description: NF17863
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17863_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 212
Target Start/End: Original strand, 47994191 - 47994386
Alignment:
| Q |
17 |
aggtcttaaccttattttattgagaggattaacatgctttaaaactttgggtcaattgatgaaatccaactttgataaaagagtaatttgaatatacaca |
116 |
Q |
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| T |
47994191 |
aggtcttaaccttattttattgagaggattaacatgctttaaaactttgggtcaattgatgaaatccaactttgataaaagagtaatttgaatatacacg |
47994290 |
T |
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| Q |
117 |
gagttagaagtataacttgttatgatattttttcttcttccgagtttcatgcaagtcgtaccatgtatatgacttgacatgttttttcagaattat |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
47994291 |
gagttagaagtataacttgttatgatattttttcttcttccgagtttcatgcaagtcgtaccatgtatatgacttgacatgttttttcagagttat |
47994386 |
T |
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