View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17865_high_10 (Length: 308)
Name: NF17865_high_10
Description: NF17865
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17865_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 16 - 300
Target Start/End: Complemental strand, 34899975 - 34899693
Alignment:
| Q |
16 |
atctcaacttgaaagttgaaactaccaaactttacctatatgcatataaacacatctctctttagttcttctctcgctatttgatgtcaacaaaagctaa |
115 |
Q |
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| T |
34899975 |
atctcaacttgaaagttgaaactaccaaactttacctatatgcatataaacacatctctctttagttcttctctcgctatttgatgtcaacaaaagctaa |
34899876 |
T |
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| Q |
116 |
attgtgtcttcccctgcgtgtatgcaaccttatagtctcaaaattttccttccattctcaccagacatgaaaggtatgtatcttccaactacaaaatttt |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
34899875 |
attgtgtcttcccctgcgtgtatgcaaccttatagtctcaaaattttccttccattctcaccaaacatgaaaggtatgtatcttccaactacaaaatttt |
34899776 |
T |
|
| Q |
216 |
atgtgaatttgtgcagatgatatcactgacaatatgataatttggtatctcttgcctatcccttattataacatttgcctatgct |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| |
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| T |
34899775 |
atgtgaatttgtgcagatgatatcactgacaatatgataatttggtatctcttgcctat--cttattataacatttgcatatgct |
34899693 |
T |
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