View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17867_low_6 (Length: 386)
Name: NF17867_low_6
Description: NF17867
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17867_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 10 - 367
Target Start/End: Original strand, 36370136 - 36370490
Alignment:
| Q |
10 |
agtagcaaagggagaaagtgacttttcttcacatccattattattggtaatcattttcttatttatgcacaaaccaagcttccttgatttaagtgacttt |
109 |
Q |
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| T |
36370136 |
agtatcaaagggagaaagtgacttttcttcacatccattattattggtaatcattttcttatttatgcacaaaccaagcttccttgatttaagtgacttt |
36370235 |
T |
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| Q |
110 |
tcctcattcttatactgattgctgatataaaatattctatgaagcaatgcttttattataaatatgaaacaattaaataagtgtatgtgagagacaggag |
209 |
Q |
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| T |
36370236 |
tcctcattcttatgctgattgctgagataaaatattctatgaagcaatgcttttat---aaatatgaaacaattaattaagtgtatgtgagagacaggag |
36370332 |
T |
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| Q |
210 |
ggaaccttgtctgattgattatattatatatgaatctcatatggatccaaatacgtccccctatatattgatgagaggtttatttctaagttttcacctt |
309 |
Q |
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| T |
36370333 |
ggaaccttgtctgattgattatattatatatgaatctcatatggatccaaataagtccccctatatattgatgagaggtttatttctaagttttcacctt |
36370432 |
T |
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| Q |
310 |
atacactaaacagcttcgtttgaattctattttgtacctgcttccacaagtgttgttt |
367 |
Q |
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| T |
36370433 |
atacactaaacagcttcgtttgaatattattttgtacctgcttccacaagtgttgttt |
36370490 |
T |
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