View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17869_high_1 (Length: 561)

Name: NF17869_high_1
Description: NF17869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17869_high_1
NF17869_high_1
[»] chr8 (52 HSPs)
chr8 (418-561)||(2339290-2339433)
chr8 (423-561)||(22781887-22782025)
chr8 (418-561)||(29563658-29563801)
chr8 (418-561)||(34028383-34028526)
chr8 (418-561)||(41915594-41915737)
chr8 (423-561)||(2229075-2229213)
chr8 (423-561)||(25847972-25848110)
chr8 (418-558)||(32159042-32159182)
chr8 (418-557)||(37564640-37564779)
chr8 (423-561)||(30923926-30924064)
chr8 (418-560)||(33642458-33642600)
chr8 (423-558)||(11293195-11293330)
chr8 (418-560)||(43295069-43295210)
chr8 (432-561)||(40465243-40465372)
chr8 (440-561)||(43135066-43135187)
chr8 (425-561)||(42351203-42351339)
chr8 (426-561)||(27793205-27793340)
chr8 (433-560)||(42189818-42189945)
chr8 (418-561)||(45145869-45146008)
chr8 (432-561)||(41569101-41569230)
chr8 (432-558)||(7668205-7668331)
chr8 (432-561)||(34157674-34157804)
chr8 (423-552)||(12270070-12270199)
chr8 (423-555)||(40834140-40834273)
chr8 (426-561)||(3799721-3799857)
chr8 (435-556)||(8242240-8242361)
chr8 (418-561)||(33837580-33837724)
chr8 (432-561)||(25878177-25878305)
chr8 (432-552)||(29916541-29916661)
chr8 (466-561)||(16928846-16928941)
chr8 (423-561)||(29563663-29563801)
chr8 (418-561)||(41915599-41915742)
chr8 (423-561)||(25847972-25848110)
chr8 (418-561)||(2339295-2339438)
chr8 (418-553)||(40465238-40465373)
chr8 (423-561)||(30923926-30924064)
chr8 (449-533)||(6197855-6197939)
chr8 (418-561)||(2229070-2229213)
chr8 (426-561)||(32159042-32159177)
chr8 (503-561)||(12270141-12270199)
chr8 (503-561)||(33642463-33642521)
chr8 (423-481)||(43135129-43135187)
chr8 (418-560)||(44796348-44796489)
chr8 (418-480)||(45145951-45146013)
chr8 (418-481)||(42351198-42351261)
chr8 (505-561)||(45145874-45145930)
chr8 (503-561)||(22781887-22781945)
chr8 (499-560)||(24915250-24915311)
chr8 (503-560)||(37564716-37564773)
chr8 (426-481)||(11293195-11293250)
chr8 (513-561)||(24177977-24178025)
chr8 (418-481)||(34028468-34028531)
[»] chr2 (64 HSPs)
chr2 (418-561)||(13775711-13775854)
chr2 (418-555)||(40430677-40430814)
chr2 (418-561)||(29866082-29866225)
chr2 (423-561)||(16241272-16241410)
chr2 (423-555)||(2100022-2100154)
chr2 (418-561)||(41260025-41260168)
chr2 (418-561)||(42263475-42263618)
chr2 (423-561)||(6761470-6761608)
chr2 (423-561)||(25891949-25892087)
chr2 (418-555)||(1944545-1944682)
chr2 (418-557)||(20427001-20427140)
chr2 (418-561)||(32750347-32750490)
chr2 (427-561)||(7765799-7765933)
chr2 (432-561)||(43657930-43658059)
chr2 (432-561)||(11363003-11363132)
chr2 (422-561)||(38598460-38598599)
chr2 (423-561)||(32197381-32197519)
chr2 (418-558)||(11711332-11711472)
chr2 (432-556)||(45065590-45065714)
chr2 (423-561)||(44737288-44737425)
chr2 (432-553)||(32880921-32881042)
chr2 (423-558)||(18452574-18452708)
chr2 (418-561)||(30864673-30864823)
chr2 (440-560)||(42341640-42341760)
chr2 (418-560)||(4740710-4740852)
chr2 (432-560)||(3264936-3265060)
chr2 (418-560)||(39377836-39377973)
chr2 (427-558)||(41205498-41205629)
chr2 (489-561)||(20360515-20360587)
chr2 (455-561)||(33913188-33913294)
chr2 (424-561)||(39377841-39377973)
chr2 (418-561)||(6761470-6761613)
chr2 (453-536)||(22857834-22857917)
chr2 (418-561)||(44737283-44737425)
chr2 (418-561)||(9152379-9152522)
chr2 (418-561)||(16241267-16241410)
chr2 (503-561)||(40430751-40430809)
chr2 (493-555)||(42470922-42470984)
chr2 (418-561)||(9152384-9152527)
chr2 (418-561)||(45034403-45034545)
chr2 (432-490)||(27182089-27182147)
chr2 (432-490)||(27831631-27831689)
chr2 (503-561)||(29866087-29866145)
chr2 (503-561)||(41260030-41260088)
chr2 (418-557)||(7765794-7765933)
chr2 (418-486)||(12486072-12486140)
chr2 (418-481)||(13775796-13775859)
chr2 (418-486)||(27596729-27596797)
chr2 (418-481)||(32750342-32750405)
chr2 (423-486)||(38598536-38598599)
chr2 (503-561)||(11711409-11711467)
chr2 (497-551)||(13021716-13021770)
chr2 (503-561)||(13775716-13775774)
chr2 (503-561)||(20427006-20427064)
chr2 (463-561)||(20555263-20555361)
chr2 (503-561)||(25892029-25892087)
chr2 (451-553)||(28248946-28249048)
chr2 (511-553)||(28249026-28249068)
chr2 (436-481)||(22857822-22857867)
chr2 (503-556)||(43658010-43658063)
chr2 (434-531)||(44736814-44736911)
chr2 (426-486)||(3037805-3037865)
chr2 (501-561)||(36881538-36881598)
chr2 (418-481)||(43657925-43657988)
[»] scaffold0123 (2 HSPs)
scaffold0123 (418-561)||(29244-29387)
scaffold0123 (423-561)||(29249-29387)
[»] chr7 (42 HSPs)
chr7 (418-561)||(5347728-5347870)
chr7 (424-561)||(3411338-3411475)
chr7 (418-561)||(7107630-7107773)
chr7 (426-561)||(12763237-12763372)
chr7 (423-561)||(23248673-23248811)
chr7 (424-561)||(30866251-30866388)
chr7 (432-561)||(34281674-34281803)
chr7 (418-561)||(20397815-20397958)
chr7 (423-558)||(5909479-5909614)
chr7 (423-561)||(12426535-12426673)
chr7 (418-561)||(35427664-35427807)
chr7 (442-560)||(29770346-29770464)
chr7 (422-561)||(32050085-32050224)
chr7 (418-557)||(7463449-7463589)
chr7 (418-558)||(10599323-10599464)
chr7 (433-552)||(19979507-19979627)
chr7 (434-560)||(12085030-12085156)
chr7 (424-560)||(6173945-6174076)
chr7 (427-555)||(46680840-46680968)
chr7 (418-558)||(15074622-15074758)
chr7 (424-552)||(17351486-17351613)
chr7 (432-539)||(46449805-46449912)
chr7 (418-561)||(20397820-20397963)
chr7 (434-556)||(26563937-26564059)
chr7 (418-558)||(12763237-12763377)
chr7 (418-561)||(23248668-23248811)
chr7 (426-561)||(5909479-5909614)
chr7 (423-481)||(7107715-7107773)
chr7 (418-561)||(27231834-27231976)
chr7 (418-560)||(30866251-30866393)
chr7 (493-552)||(36655434-36655493)
chr7 (503-561)||(35427744-35427802)
chr7 (501-561)||(10007659-10007719)
chr7 (418-561)||(12426530-12426673)
chr7 (518-561)||(2523870-2523913)
chr7 (418-552)||(34281669-34281803)
chr7 (424-482)||(12085030-12085088)
chr7 (503-560)||(3411338-3411395)
chr7 (418-481)||(5347723-5347786)
chr7 (432-536)||(22055760-22055864)
chr7 (418-486)||(26564001-26564069)
chr7 (451-483)||(46449811-46449843)
[»] chr5 (58 HSPs)
chr5 (418-561)||(31802963-31803106)
chr5 (423-561)||(41989569-41989707)
chr5 (418-560)||(9601599-9601741)
chr5 (423-561)||(13144885-13145023)
chr5 (424-561)||(37699785-37699922)
chr5 (418-558)||(7749918-7750058)
chr5 (423-561)||(25027699-25027837)
chr5 (418-560)||(6338321-6338463)
chr5 (423-561)||(29374175-29374313)
chr5 (432-561)||(26898205-26898334)
chr5 (418-561)||(903971-904114)
chr5 (418-561)||(7053648-7053790)
chr5 (426-553)||(20578668-20578795)
chr5 (418-561)||(23411165-23411308)
chr5 (423-561)||(1643349-1643487)
chr5 (423-553)||(15569344-15569474)
chr5 (432-561)||(36418990-36419119)
chr5 (423-552)||(41046833-41046962)
chr5 (418-561)||(36417052-36417195)
chr5 (418-556)||(18353218-18353356)
chr5 (418-561)||(7945837-7945980)
chr5 (424-561)||(1108289-1108426)
chr5 (432-561)||(42311815-42311944)
chr5 (418-560)||(21610307-21610449)
chr5 (432-558)||(41815199-41815325)
chr5 (424-561)||(2959244-2959381)
chr5 (424-561)||(2967713-2967850)
chr5 (432-561)||(21090381-21090510)
chr5 (453-560)||(2825895-2826002)
chr5 (432-560)||(6910726-6910854)
chr5 (426-560)||(16089092-16089228)
chr5 (427-561)||(14338824-14338958)
chr5 (423-524)||(38393797-38393898)
chr5 (418-561)||(13144885-13145028)
chr5 (418-561)||(22731259-22731401)
chr5 (418-560)||(37699780-37699922)
chr5 (426-561)||(7749923-7750058)
chr5 (418-561)||(15968316-15968458)
chr5 (418-561)||(25027699-25027842)
chr5 (418-481)||(29374255-29374318)
chr5 (503-561)||(7053653-7053711)
chr5 (424-561)||(9601599-9601736)
chr5 (503-561)||(15569416-15569474)
chr5 (423-481)||(21090381-21090439)
chr5 (503-561)||(41989569-41989627)
chr5 (418-481)||(1643429-1643492)
chr5 (418-481)||(23411250-23411313)
chr5 (418-556)||(26898201-26898339)
chr5 (498-560)||(1108289-1108351)
chr5 (503-561)||(31803043-31803101)
chr5 (503-557)||(36417132-36417186)
chr5 (503-561)||(41046833-41046891)
chr5 (432-481)||(2825945-2825994)
chr5 (503-560)||(2959324-2959381)
chr5 (503-560)||(2967793-2967850)
chr5 (453-482)||(7272241-7272270)
chr5 (418-473)||(31802958-31803013)
chr5 (423-483)||(42311815-42311875)
[»] chr4 (77 HSPs)
chr4 (424-558)||(31227277-31227411)
chr4 (424-560)||(31854385-31854521)
chr4 (424-558)||(5970287-5970421)
chr4 (423-561)||(36099492-36099630)
chr4 (418-561)||(38687916-38688059)
chr4 (423-561)||(4758782-4758920)
chr4 (418-556)||(39877403-39877541)
chr4 (421-561)||(6246611-6246751)
chr4 (427-554)||(2279533-2279660)
chr4 (418-561)||(2385200-2385343)
chr4 (423-561)||(53621333-53621471)
chr4 (418-561)||(23125646-23125789)
chr4 (423-561)||(580416-580554)
chr4 (435-560)||(47948956-47949081)
chr4 (418-561)||(19485572-19485715)
chr4 (418-557)||(21221118-21221256)
chr4 (426-557)||(18430262-18430395)
chr4 (423-557)||(18135320-18135456)
chr4 (420-561)||(35328941-35329082)
chr4 (432-552)||(56216248-56216368)
chr4 (418-561)||(44199977-44200120)
chr4 (418-561)||(55292117-55292260)
chr4 (423-561)||(49122526-49122663)
chr4 (418-557)||(3085882-3086020)
chr4 (432-561)||(2411845-2411974)
chr4 (424-561)||(52535956-52536093)
chr4 (457-561)||(20688455-20688559)
chr4 (418-516)||(7350256-7350354)
chr4 (418-559)||(39834274-39834415)
chr4 (424-561)||(53303742-53303879)
chr4 (439-561)||(32517775-32517899)
chr4 (432-552)||(38046624-38046744)
chr4 (432-561)||(15170888-15171017)
chr4 (424-525)||(51833018-51833119)
chr4 (418-558)||(21229225-21229365)
chr4 (465-561)||(29833270-29833366)
chr4 (418-499)||(27006505-27006586)
chr4 (423-561)||(54611979-54612107)
chr4 (418-561)||(6246613-6246756)
chr4 (418-561)||(4758777-4758920)
chr4 (434-536)||(4698639-4698741)
chr4 (413-561)||(36099492-36099640)
chr4 (418-561)||(20459241-20459383)
chr4 (418-561)||(47866041-47866183)
chr4 (418-557)||(2385195-2385334)
chr4 (426-560)||(31227277-31227411)
chr4 (418-561)||(42804261-42804403)
chr4 (418-561)||(53621328-53621471)
chr4 (423-481)||(20688501-20688559)
chr4 (503-561)||(23125651-23125709)
chr4 (423-561)||(43020761-43020898)
chr4 (432-536)||(4698653-4698757)
chr4 (517-561)||(9894630-9894674)
chr4 (418-561)||(38687911-38688054)
chr4 (432-524)||(43413584-43413675)
chr4 (518-557)||(7350196-7350235)
chr4 (503-558)||(18430340-18430395)
chr4 (418-481)||(19485657-19485720)
chr4 (455-490)||(20114096-20114131)
chr4 (503-561)||(580496-580554)
chr4 (503-557)||(2279533-2279587)
chr4 (503-561)||(3085957-3086015)
chr4 (418-480)||(15170883-15170945)
chr4 (503-561)||(18135398-18135456)
chr4 (503-561)||(27006510-27006568)
chr4 (420-481)||(32517772-32517833)
chr4 (511-561)||(53225737-53225787)
chr4 (503-561)||(54611979-54612037)
chr4 (503-560)||(5970364-5970421)
chr4 (503-560)||(31854464-31854521)
chr4 (503-560)||(51833018-51833075)
chr4 (418-558)||(3043800-3043939)
chr4 (423-483)||(29833270-29833330)
chr4 (429-481)||(39732012-39732064)
chr4 (501-561)||(44111828-44111888)
chr4 (418-486)||(53225724-53225792)
chr4 (451-483)||(55466115-55466147)
[»] chr6 (37 HSPs)
chr6 (418-561)||(390810-390953)
chr6 (418-561)||(24949636-24949779)
chr6 (423-561)||(31971035-31971173)
chr6 (418-561)||(6047801-6047944)
chr6 (426-561)||(7405452-7405587)
chr6 (423-561)||(885607-885745)
chr6 (412-561)||(6045686-6045835)
chr6 (418-561)||(766432-766575)
chr6 (418-561)||(17225248-17225391)
chr6 (418-553)||(30686544-30686679)
chr6 (426-561)||(33859498-33859633)
chr6 (418-561)||(8558919-8559061)
chr6 (426-561)||(34639045-34639180)
chr6 (432-533)||(6801584-6801685)
chr6 (424-561)||(14931264-14931396)
chr6 (432-555)||(13144220-13144343)
chr6 (423-513)||(22898858-22898948)
chr6 (423-512)||(22880923-22881012)
chr6 (453-533)||(36349-36429)
chr6 (418-561)||(24949631-24949774)
chr6 (418-481)||(14931338-14931401)
chr6 (418-558)||(7405452-7405592)
chr6 (432-560)||(28630759-28630887)
chr6 (418-561)||(885602-885745)
chr6 (503-560)||(14931264-14931321)
chr6 (418-561)||(31971030-31971173)
chr6 (503-561)||(390890-390948)
chr6 (418-561)||(6045681-6045824)
chr6 (418-481)||(8558914-8558977)
chr6 (503-561)||(766512-766570)
chr6 (418-556)||(1158245-1158383)
chr6 (503-561)||(6047881-6047939)
chr6 (503-561)||(30686549-30686607)
chr6 (418-558)||(33859498-33859638)
chr6 (418-486)||(2943322-2943390)
chr6 (418-481)||(6047796-6047859)
chr6 (418-481)||(17225243-17225306)
[»] chr3 (75 HSPs)
chr3 (418-561)||(14768098-14768241)
chr3 (423-561)||(6086906-6087044)
chr3 (423-561)||(25113354-25113492)
chr3 (423-561)||(26999026-26999164)
chr3 (418-560)||(47449916-47450058)
chr3 (420-555)||(335386-335521)
chr3 (418-561)||(9465076-9465219)
chr3 (418-561)||(19202255-19202398)
chr3 (418-561)||(40214905-40215048)
chr3 (423-561)||(9440133-9440271)
chr3 (423-561)||(10049673-10049811)
chr3 (424-561)||(25846516-25846653)
chr3 (418-561)||(28945656-28945799)
chr3 (418-556)||(29019735-29019873)
chr3 (423-557)||(49122949-49123083)
chr3 (432-561)||(51698119-51698248)
chr3 (429-555)||(9190039-9190165)
chr3 (435-561)||(40464539-40464665)
chr3 (423-560)||(8243688-8243825)
chr3 (424-561)||(18765263-18765400)
chr3 (432-561)||(21653349-21653478)
chr3 (418-560)||(379070-379215)
chr3 (426-561)||(28564940-28565075)
chr3 (432-561)||(23825163-23825292)
chr3 (432-545)||(52114045-52114158)
chr3 (418-561)||(42605832-42605975)
chr3 (418-561)||(42225567-42225710)
chr3 (449-558)||(1122306-1122415)
chr3 (424-561)||(13826118-13826255)
chr3 (433-561)||(22003811-22003939)
chr3 (433-561)||(22011328-22011456)
chr3 (432-561)||(39341377-39341509)
chr3 (427-535)||(8825740-8825848)
chr3 (453-558)||(44593209-44593314)
chr3 (474-561)||(26123046-26123133)
chr3 (432-510)||(40141930-40142008)
chr3 (434-512)||(16660334-16660414)
chr3 (418-550)||(3484332-3484460)
chr3 (424-561)||(8243688-8243825)
chr3 (418-561)||(10049673-10049816)
chr3 (418-561)||(26999026-26999169)
chr3 (418-535)||(48593173-48593290)
chr3 (418-561)||(6086901-6087044)
chr3 (418-561)||(28406467-28406610)
chr3 (418-561)||(28945661-28945804)
chr3 (434-533)||(55139189-55139288)
chr3 (423-561)||(9440133-9440271)
chr3 (418-561)||(40214900-40215043)
chr3 (465-530)||(42841635-42841700)
chr3 (423-561)||(14768103-14768241)
chr3 (423-561)||(25113354-25113492)
chr3 (418-561)||(28406472-28406615)
chr3 (451-489)||(8987806-8987844)
chr3 (423-560)||(18765263-18765400)
chr3 (416-558)||(28564933-28565075)
chr3 (423-473)||(42841862-42841912)
chr3 (503-561)||(49122949-49123007)
chr3 (418-555)||(51698114-51698251)
chr3 (432-561)||(29019740-29019869)
chr3 (418-561)||(9465071-9465214)
chr3 (435-483)||(19880869-19880917)
chr3 (418-481)||(23825234-23825297)
chr3 (424-561)||(379075-379215)
chr3 (518-561)||(21662891-21662934)
chr3 (418-481)||(26123075-26123138)
chr3 (418-561)||(53441907-53442050)
chr3 (423-481)||(22003881-22003939)
chr3 (423-481)||(22011398-22011456)
chr3 (439-561)||(29457861-29457982)
chr3 (503-561)||(47449921-47449979)
chr3 (527-561)||(51516963-51516997)
chr3 (503-560)||(25846596-25846653)
chr3 (418-467)||(39341372-39341421)
chr3 (503-556)||(52114109-52114162)
chr3 (439-531)||(48593163-48593255)
[»] chr1 (62 HSPs)
chr1 (418-561)||(2961109-2961252)
chr1 (423-561)||(2352314-2352452)
chr1 (423-561)||(9301924-9302062)
chr1 (418-561)||(10380395-10380538)
chr1 (423-557)||(14281595-14281729)
chr1 (418-561)||(26550292-26550435)
chr1 (418-561)||(33325333-33325476)
chr1 (423-561)||(23398085-23398223)
chr1 (424-558)||(28359079-28359213)
chr1 (423-561)||(29312444-29312582)
chr1 (423-561)||(38830488-38830626)
chr1 (432-558)||(1673980-1674106)
chr1 (418-558)||(40161181-40161320)
chr1 (426-561)||(28989280-28989415)
chr1 (423-561)||(7796095-7796233)
chr1 (423-561)||(9548677-9548815)
chr1 (432-560)||(15289787-15289915)
chr1 (418-558)||(26733785-26733925)
chr1 (423-561)||(10065260-10065398)
chr1 (423-561)||(45536168-45536306)
chr1 (444-561)||(26545023-26545140)
chr1 (423-561)||(30264779-30264917)
chr1 (432-553)||(24594932-24595052)
chr1 (433-558)||(6784674-6784799)
chr1 (418-561)||(34718891-34719027)
chr1 (432-561)||(46320162-46320283)
chr1 (418-501)||(23537386-23537469)
chr1 (418-561)||(9301919-9302062)
chr1 (370-416)||(19487505-19487551)
chr1 (432-558)||(24463304-24463429)
chr1 (418-561)||(2352314-2352457)
chr1 (418-561)||(43929346-43929488)
chr1 (418-561)||(26733790-26733933)
chr1 (418-481)||(23398165-23398228)
chr1 (418-561)||(26070829-26070972)
chr1 (418-561)||(38830488-38830631)
chr1 (423-557)||(10380395-10380529)
chr1 (427-561)||(14281595-14281729)
chr1 (503-561)||(29312444-29312502)
chr1 (423-560)||(49944839-49944976)
chr1 (476-561)||(50155356-50155441)
chr1 (418-557)||(2961104-2961243)
chr1 (418-549)||(29892149-29892278)
chr1 (418-561)||(7796090-7796233)
chr1 (418-481)||(10065255-10065318)
chr1 (270-301)||(19487476-19487507)
chr1 (423-481)||(26545082-26545140)
chr1 (423-561)||(26550292-26550430)
chr1 (518-561)||(29256698-29256741)
chr1 (419-481)||(33325418-33325480)
chr1 (426-481)||(40161181-40161236)
chr1 (426-483)||(1673980-1674037)
chr1 (503-561)||(9548677-9548735)
chr1 (527-561)||(26924218-26924252)
chr1 (503-561)||(34718896-34718954)
chr1 (503-561)||(45536248-45536306)
chr1 (423-464)||(2512416-2512457)
chr1 (424-480)||(15289859-15289915)
chr1 (503-560)||(28359156-28359213)
chr1 (511-560)||(47946007-47946056)
chr1 (418-466)||(9548772-9548820)
chr1 (501-561)||(38040359-38040419)
[»] scaffold0002 (1 HSPs)
scaffold0002 (418-561)||(492310-492453)
[»] scaffold0221 (3 HSPs)
scaffold0221 (418-561)||(11030-11173)
scaffold0221 (418-481)||(11115-11178)
scaffold0221 (503-561)||(11035-11093)
[»] scaffold0144 (2 HSPs)
scaffold0144 (422-561)||(38829-38968)
scaffold0144 (418-561)||(38830-38973)
[»] scaffold2107 (2 HSPs)
scaffold2107 (432-561)||(457-586)
scaffold2107 (418-481)||(528-591)
[»] scaffold0024 (2 HSPs)
scaffold0024 (418-561)||(35954-36097)
scaffold0024 (418-561)||(35959-36102)
[»] scaffold0007 (2 HSPs)
scaffold0007 (418-561)||(77350-77492)
scaffold0007 (418-561)||(77345-77487)
[»] scaffold0592 (1 HSPs)
scaffold0592 (432-561)||(393-522)
[»] scaffold0009 (1 HSPs)
scaffold0009 (432-560)||(3637-3774)
[»] scaffold0246 (2 HSPs)
scaffold0246 (422-558)||(15159-15294)
scaffold0246 (418-482)||(15238-15302)
[»] scaffold0067 (1 HSPs)
scaffold0067 (432-558)||(5230-5356)
[»] scaffold0314 (1 HSPs)
scaffold0314 (418-462)||(17848-17892)


Alignment Details
Target: chr8 (Bit Score: 116; Significance: 9e-59; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 2339290 - 2339433
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  2339290 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattc 2339389  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  2339390 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 2339433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 22781887 - 22782025
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  22781887 ctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 22781986  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  22781987 atccaaaaaatcaactttctcttataaataggaccggag 22782025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 29563658 - 29563801
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||     
T  29563658 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattg 29563757  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  29563758 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 29563801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 34028383 - 34028526
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  34028383 actccctccggtcctatttacaagtaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattc 34028482  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||| |||||||||||||| |||||||||||||||    
T  34028483 aatgtatctaaaaggtcaactttctcttgtaaataggaccggag 34028526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 41915594 - 41915737
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||     
T  41915594 actccctccggtcctatttataagagacaatttaatttttagatacattaaataatttatgtatttggtttagattattgactagatacatacattattc 41915693  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||| |||||||| |||||||||||||||    
T  41915694 aatgtatctaaaaagtcaattttctcttgtaaataggaccggag 41915737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 2229213 - 2229075
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| | |||    
T  2229213 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcattgt 2229114  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  2229113 atctaaaaagtcaactgtctcttgtaaataggaccggag 2229075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 25847972 - 25848110
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||    
T  25847972 ctccgatcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgt 25848071  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  25848072 atctaaaaagtcaactgtctcttgtaaataggaccggag 25848110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 418 - 558
Target Start/End: Complemental strand, 32159182 - 32159042
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||    
T  32159182 actccctccgatcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttagattcttgattagatacatacattattt 32159083  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||||||| |||||||||| |||||||| ||||||||||||    
T  32159082 aatgtatctaaaaagtcaaatttctcttgtaaataggaccg 32159042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 557
Target Start/End: Complemental strand, 37564779 - 37564640
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    ||||| ||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||     
T  37564779 actctttccggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttaactagatgcatacattattc 37564680  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    |||||||  |||||||||||||||||||||||||||||||    
T  37564679 aatgtatttaaaaagtcaactttctcttataaataggacc 37564640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 30924064 - 30923926
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||    
T  30924064 ctccggtcctatttataaaagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattcaatgt 30923965  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  30923964 atctaaaaagtcaactgtctcttgtaaataggaccggag 30923926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 418 - 560
Target Start/End: Original strand, 33642458 - 33642600
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  33642458 actccctccggtcctatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattc 33642557  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||||||| ||||| ||||||||||||| |||||| |||||||    
T  33642558 aatgtatctaaaaaatcaactttctcttgtaaataagaccgga 33642600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 423 - 558
Target Start/End: Complemental strand, 11293330 - 11293195
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||| ||||||||||| |||||||||  ||||||||||| |||||||||||||||||||||| |||||    
T  11293330 ctccggtcctatttacaagagacaatttactttttaaatacattaaatcatttatgtaaatggtttaggttcttgactagatacatacattattcaatgt 11293231  T
Q  523 atccaaaaagtcaactttctcttataaataggaccg 558  Q
    ||| ||||||||||||||||||| ||||||||||||    
T  11293230 atctaaaaagtcaactttctcttgtaaataggaccg 11293195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 418 - 560
Target Start/End: Complemental strand, 43295210 - 43295069
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    ||||||||||||| ||||||||| | |||| | |||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  43295210 actctctccggtcctatttacaaaa-acaaataactttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattc 43295112  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||||||| ||||||| ||||||||||||||||||||| ||||    
T  43295111 aatgtatctaaaaagttaactttctcttataaataggatcgga 43295069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 40465372 - 40465243
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  40465372 tatttataagagaaaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaa 40465273  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    ||||| |||||||| ||||||||| |||||    
T  40465272 gtcaattttctcttgtaaataggatcggag 40465243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 440 - 561
Target Start/End: Original strand, 43135066 - 43135187
Alignment:
Q  440 agagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactt 539  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||     
T  43135066 agagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactg 43135165  T
Q  540 tctcttataaataggaccggag 561  Q
    |||||| |||||||||||||||    
T  43135166 tctcttgtaaataggaccggag 43135187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 425 - 561
Target Start/End: Complemental strand, 42351339 - 42351203
Alignment:
Q  425 ccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtat 524  Q
    |||||| |||||||||||||||| ||| ||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||| ||||||||||||||    
T  42351339 ccggtcctatttacaagagacaatttattttttagatacattaaataatttatatatttgatttaggttcttgactagatacatatattatttaatgtat 42351240  T
Q  525 ccaaaaagtcaactttctcttataaataggaccggag 561  Q
    | ||||||||||| ||||||| |||||| ||||||||    
T  42351239 ctaaaaagtcaacattctcttgtaaataagaccggag 42351203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 27793205 - 27793340
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| ||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| ||| ||||    
T  27793205 cggtcctatttacaagagataatttactttttagatgcattaaataatttatgtatttggtttaggttcttgaccagatatatacattattgaatatatc 27793304  T
Q  526 caaaaagtcaactttctcttataaataggaccggag 561  Q
     ||||||||||||||||||| |||||||||||||||    
T  27793305 taaaaagtcaactttctcttgtaaataggaccggag 27793340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 433 - 560
Target Start/End: Original strand, 42189818 - 42189945
Alignment:
Q  433 atttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaag 532  Q
    ||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| ||||||    
T  42189818 atttacaagagacaatttactttttaaatatattaaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgtatctaaaaag 42189917  T
Q  533 tcaactttctcttataaataggaccgga 560  Q
    |||||||| || ||||||||||||||||    
T  42189918 tcaactttatcatataaataggaccgga 42189945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 45145869 - 45146008
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||    |||||||||||||     
T  45145869 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtttttggtttaggttcttgac----tacatacattattc 45145964  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||| |||||||| |||||||||||||||    
T  45145965 aatgtatctaaaaagtcaattttctcttgtaaataggaccggag 45146008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 41569230 - 41569101
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||| |||| |||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||| |||| |||||    
T  41569230 tatttacaagaaacaatttactttttagatatattaaataatttatgtatttggttgaggttcttgactagatacatacattattcaatatatctaaaaa 41569131  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
     ||||||||||||| |||||||||||||||    
T  41569130 atcaactttctcttgtaaataggaccggag 41569101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 432 - 558
Target Start/End: Original strand, 7668205 - 7668331
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||  |||||    
T  7668205 tatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatttaaaaa 7668304  T
Q  532 gtcaactttctcttataaataggaccg 558  Q
    | ||| |||||||| ||||||||||||    
T  7668305 gacaattttctcttgtaaataggaccg 7668331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 432 - 561
Target Start/End: Original strand, 34157674 - 34157804
Alignment:
Q  432 tatttacaagagacaagttactttt-tagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaa 530  Q
    ||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||  ||||||||||||    
T  34157674 tatttacaagagataatttacttttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcgatgtatccaaaa 34157773  T
Q  531 agtcaactttctcttataaataggaccggag 561  Q
    | |||| |||||||| |||||||||||||||    
T  34157774 attcaaatttctcttgtaaataggaccggag 34157804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 423 - 552
Target Start/End: Complemental strand, 12270199 - 12270070
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||| ||| ||||||  ||||    
T  12270199 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactaaatatatatattattcgatgt 12270100  T
Q  523 atccaaaaagtcaactttctcttataaata 552  Q
    ||| ||||||||||||||||||| ||||||    
T  12270099 atctaaaaagtcaactttctcttgtaaata 12270070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 423 - 555
Target Start/End: Original strand, 40834140 - 40834273
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttt-tagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    |||||||| |||||||||||||||| | | |||| ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||    
T  40834140 ctccggtcctatttacaagagacaattaatttttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatg 40834239  T
Q  522 tatccaaaaagtcaactttctcttataaatagga 555  Q
    |||| |||||| ||| ||||||||||||||||||    
T  40834240 tatctaaaaagacaattttctcttataaatagga 40834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 426 - 561
Target Start/End: Complemental strand, 3799857 - 3799721
Alignment:
Q  426 cggtcatatttacaagagacaagttacttttt-agatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtat 524  Q
    ||||| ||||||||| |||||| ||||||||| | ||||||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||    
T  3799857 cggtcctatttacaatagacaatttacttttttaaatacattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtat 3799758  T
Q  525 ccaaaaagtcaactttctcttataaataggaccggag 561  Q
    | |||||| | |||||||||||||||| |||||||||    
T  3799757 ctaaaaagccgactttctcttataaatgggaccggag 3799721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 435 - 556
Target Start/End: Original strand, 8242240 - 8242361
Alignment:
Q  435 ttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtc 534  Q
    ||||||||||||| |||||||||| ||||||||||| ||||||||||||| |||||||| |||||||||||||||||||||| |||||||| ||||| ||    
T  8242240 ttacaagagacaatttactttttaaatacattaaatgatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatctaaaaaatc 8242339  T
Q  535 aactttctcttataaataggac 556  Q
    || ||||| |||||||||||||    
T  8242340 aaatttcttttataaataggac 8242361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 33837580 - 33837724
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||  |||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| || ||||||||||||||| ||||||     
T  33837580 actccctccggttctatttacaagagacaatttactttttagatacattaaataatttatgcatttagtttagattcttgactagatacataaattattc 33837679  T
Q  518 aatgta-tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||| |  ||||| ||||||||||||| |||||||||||||||    
T  33837680 aatgtatttaaaaaaatcaactttctcttgtaaataggaccggag 33837724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 25878305 - 25878177
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||| |||| |||||||| |||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| || |||||||  |||||    
T  25878305 tatttacaagaaacaatttactttt-agatacattatataatttatgtatttgatttaggttcttgactagatacatacattcttcaatgtatttaaaaa 25878207  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    ||||| ||||||||||||||||||| ||||    
T  25878206 gtcaattttctcttataaataggactggag 25878177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 432 - 552
Target Start/End: Original strand, 29916541 - 29916661
Alignment:
Q  432 tatttacaagagacaagttactttt-tagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaa 530  Q
    ||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| |||| |||| |||| |||||||  ||||    
T  29916541 tatttacaagaaacaatttacttttttagatacattaaataatttatgtatttggtttaagttcttgactaaatac-tacaatattcaatgtatataaaa 29916639  T
Q  531 agtcaactttctcttataaata 552  Q
    ||||||  ||||||||||||||    
T  29916640 agtcaatcttctcttataaata 29916661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 466 - 561
Target Start/End: Complemental strand, 16928941 - 16928846
Alignment:
Q  466 taaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||||||||||||||||||| || |||| |||||||||| |||||| ||| |||| |||| |||||| ||||||| |||||||||| ||||    
T  16928941 taaataatttatgtatttggtttagattcttgagtagatacataaattattcaatttatctaaaatgtcaacattctcttgtaaataggactggag 16928846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 29563801 - 29563663
Alignment:
Q  423 ctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||| ||    |  || | ||||||| |||||||||||    
T  29563801 ctccggtcctatttacaagaga-aagttgactttttagatacattcaataatgtatgtatctagttaagaacctaaaccaaatacataaattatttaatg 29563703  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||||||| || | |||||| |||||||||||||||    
T  29563702 tatctaaaaagtaaattgtctcttgtaaataggaccggag 29563663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 41915742 - 41915599
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || | |||||||||||||||| |||||| ||||||| | ||  |   | |  || | ||||||| |||||||    
T  41915742 actccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaataatctaaaccaaatacataaattattt 41915643  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| | || | ||||||||||||||||||||||    
T  41915642 aatgtatctaaaaattaaattgtctcttataaataggaccggag 41915599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 25848110 - 25847972
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||||| ||  ||    |  || | ||||||| ||||||||||||    
T  25848110 ctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgt 25848011  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||||| || | |||||| ||||||||| |||||    
T  25848010 atctaaaaagtaaattgtctcttgtaaataggatcggag 25847972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 2339438 - 2339295
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||||||    
T  2339438 actccctccggtcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 2339340  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| ||||||| || | |||||| |||||||||||||||    
T  2339339 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 2339295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 553
Target Start/End: Original strand, 40465238 - 40465373
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||| || ||||||||||||| || | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||    
T  40465238 actccctccgatcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 40465337  T
Q  518 aatgtatccaaaaagtcaactttctcttataaatag 553  Q
    |||||||| ||||||| || ||||||||||||||||    
T  40465338 aatgtatctaaaaagtaaattttctcttataaatag 40465373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 30923926 - 30924064
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| |  |  ||    |  || | ||||||| ||||||||||||    
T  30923926 ctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgt 30924025  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||||| || | ||| ||||||||||||||||||    
T  30924026 atctaaaaagtaaattgtcttttataaataggaccggag 30924064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 449 - 533
Target Start/End: Complemental strand, 6197939 - 6197855
Alignment:
Q  449 ttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagt 533  Q
    |||||||||||||||||||||||||| ||||||||  | || | ||  ||||||||||||  | ||||||||||||| |||||||    
T  6197939 ttactttttagatacattaaataattaatgtatttaatctatgataaagactagatacattaactatttaatgtatctaaaaagt 6197855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 2229070 - 2229213
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||| | |||||| ||||||| | ||  ||    |  || | ||||||| ||||||     
T  2229070 actccctccggtcctatttacaagagacagttgactttttagatacaatgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattc 2229169  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  2229170 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 2229213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 32159042 - 32159177
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| ||||||||||||| |  | ||||||||||||||||||||||| ||||||| |  |  ||  | |  || | ||||||| |||||||||||||||    
T  32159042 cggtcctatttacaagagaaatttgactttttagatacattaaataatgtatgtatctaatcaagaatctaaaccaaatacataaattatttaatgtatc 32159141  T
Q  526 caaaaagtcaactttctcttataaataggaccggag 561  Q
     ||||||| || | |||||| ||||||||| |||||    
T  32159142 taaaaagtaaattgtctcttgtaaataggatcggag 32159177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 12270141 - 12270199
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  12270141 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 12270199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 33642521 - 33642463
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  33642521 atacataaattatttaatgtatctaaaaagtaaattatctcttgtaaataggaccggag 33642463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 481
Target Start/End: Complemental strand, 43135187 - 43135129
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||||||| |||||||||||||||  | |||||||||||||||| |||||| |||||||    
T  43135187 ctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 43135129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 560
Target Start/End: Complemental strand, 44796489 - 44796348
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||| || |||| |||| ||||||||| ||| |||| |||| || ||||||||||| ||  || | | |||  |||||  ||||||     
T  44796489 actccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctatgtacatcaattattg 44796391  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||| ||| ||||||| |||||| |||||||||||||||||||    
T  44796390 aatgaatctaaaaagttaactttttcttataaataggaccgga 44796348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 480
Target Start/End: Complemental strand, 45146013 - 45145951
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgta 480  Q
    |||| |||||||| ||||||||||||| || | |||||||||||||||| |||||| ||||||    
T  45146013 actccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgta 45145951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 42351198 - 42351261
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||||||| | ||| ||||||||||||||||||||||| |||||||    
T  42351198 actccctccggtcttatttacaagaga-atgttgactttttagatacattaaataatatatgtat 42351261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 505 - 561
Target Start/End: Complemental strand, 45145930 - 45145874
Alignment:
Q  505 acatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  45145930 acataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 45145874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 22781945 - 22781887
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | | |||| |||||||||||||||    
T  22781945 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggag 22781887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 560
Target Start/End: Original strand, 24915250 - 24915311
Alignment:
Q  499 ctagatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||||||  ||||||||||| ||| ||||||| || ||| || ||||||||||||||||    
T  24915250 ctagatacatcaattatttaatgaatctaaaaagttaattttttcatataaataggaccgga 24915311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 37564716 - 37564773
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| ||||||||||||||  ||||||| || | |||||| ||||||||||||||    
T  37564716 atacataaattatttaatgtatttaaaaagtaaattgtctcttgtaaataggaccgga 37564773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 481
Target Start/End: Original strand, 11293195 - 11293250
Alignment:
Q  426 cggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    ||||| ||||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  11293195 cggtcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtat 11293250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 561
Target Start/End: Complemental strand, 24178025 - 24177977
Alignment:
Q  513 tatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| |||| ||| ||||||| |||||| ||||||||||||||||||||    
T  24178025 tattgaatgaatctaaaaagttaactttttcttataaataggaccggag 24177977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 34028531 - 34028468
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||||||| ||||| || ||||||||||||| |||||| |||||||    
T  34028531 actccctccggtcctatttacaagaga-aagttgaccttttagatacattgaataatgtatgtat 34028468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 116; Significance: 9e-59; HSPs: 64)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 13775711 - 13775854
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13775711 actccctccggtcctatttacaagagataatttactttttagatatattaaataatttatgtatttggtttaggtttttgactagatacatacattattt 13775810  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  13775811 aatgtatctaaaaagtcaactttctcttataaataggaccggag 13775854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 418 - 555
Target Start/End: Complemental strand, 40430814 - 40430677
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    ||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  40430814 actctctccggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattg 40430715  T
Q  518 aatgtatccaaaaagtcaactttctcttataaatagga 555  Q
    |||||||| |||||||||| ||||||||||||||||||    
T  40430714 aatgtatctaaaaagtcaattttctcttataaatagga 40430677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 29866082 - 29866225
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  29866082 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattc 29866181  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||| | |||||||||||||| |||| |||||||||||||||    
T  29866182 aatgtacctaaaaagtcaactttatcttgtaaataggaccggag 29866225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 16241410 - 16241272
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  16241410 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 16241311  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  16241310 atctaaaaagtcaactgtctcttgtaaataggaccggag 16241272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 423 - 555
Target Start/End: Original strand, 2100022 - 2100154
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  2100022 ctccggtcctatttacaagagacatgttattttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 2100121  T
Q  523 atccaaaaagtcaactttctcttataaatagga 555  Q
    ||| |||||||||||||||| ||||||||||||    
T  2100122 atctaaaaagtcaactttcttttataaatagga 2100154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 41260025 - 41260168
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  41260025 actccctccggtcctatttacaagagacaatttacttttttgatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattc 41260124  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||  |||||||| |||||||||| |||||||||||||||    
T  41260125 aatgtatttaaaaagtcgactttctcttgtaaataggaccggag 41260168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 42263618 - 42263475
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||     
T  42263618 actccctccagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattc 42263519  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| |||||||||||||||||||||||||||||    
T  42263518 aatgtatctaaaaaatcaactttctcttataaataggaccggag 42263475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 6761470 - 6761608
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  6761470 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgt 6761569  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  6761570 atctaaaaagtcaactgtctcttgtaaataggaccggag 6761608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 25892087 - 25891949
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||| |    
T  25892087 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaattt 25891988  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||||||||||||| |||||    
T  25891987 atctaaaaagtcaactgtctcttataaataggatcggag 25891949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 418 - 555
Target Start/End: Complemental strand, 1944682 - 1944545
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||||||||||||||||     
T  1944682 actccctccagtcatatttacaagagacaagttactttttagatacattaaataatatatgaatttggtttaggttcttgactagatacatacattattc 1944583  T
Q  518 aatgtatccaaaaagtcaactttctcttataaatagga 555  Q
    |||||||| |||||||||||||||| || |||||||||    
T  1944582 aatgtatctaaaaagtcaactttcttttgtaaatagga 1944545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 557
Target Start/End: Original strand, 20427001 - 20427140
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||     
T  20427001 actccctccggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttaggttcttgactagatacatacattattc 20427100  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    |||||||| |||||||||| ||||||||||||||| ||||    
T  20427101 aatgtatctaaaaagtcaattttctcttataaataagacc 20427140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 32750490 - 32750347
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||| || |||||||||||||| ||||||||||||||||||||| |||||||||||||||| ||||| || ||||||||||||||||||||||     
T  32750490 actccctccgatcctatttacaagagacgagttactttttagatacattacataatttatgtatttgatttagattcttgactagatacatacattattc 32750391  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  32750390 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 32750347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 427 - 561
Target Start/End: Complemental strand, 7765933 - 7765799
Alignment:
Q  427 ggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatcc 526  Q
    |||| |||||| ||||||||| |||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||| ||||||||     
T  7765933 ggtcctatttataagagacaatttactttttagatacattaaataaattatgtatttgatttaggttcttgactagatacatacattattcaatgtatct 7765834  T
Q  527 aaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||||||||||||| |||||||||||||||    
T  7765833 aaaaagtcaactttctcttgtaaataggaccggag 7765799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 43658059 - 43657930
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  43658059 tatttacaagagataatttactttttagatacattaaataatttatgtatttggtttaggtttttgactagatacatacattattcaatgtatctaaaaa 43657960  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    |||||||||||||| |||||| | ||||||    
T  43657959 gtcaactttctcttgtaaataagtccggag 43657930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 11363132 - 11363003
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||| ||| |||||    
T  11363132 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatagatacattattcaatgcatctaaaaa 11363033  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    |||||||||||||| |||||| || |||||    
T  11363032 gtcaactttctcttgtaaataagatcggag 11363003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 422 - 561
Target Start/End: Original strand, 38598460 - 38598599
Alignment:
Q  422 tctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    ||||||||| |||||||||||||||| |||||||||| ||| |||||||||||||||||||||||||||||| ||||| ||||||||| |||||| ||||    
T  38598460 tctccggtcttatttacaagagacaatttactttttatatatattaaataatttatgtatttggtttaggttcttgaccagatacatatattattcaatg 38598559  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||||||| |||||||| || |||||||||||||||    
T  38598560 tatctaaaaagtaaactttcttttgtaaataggaccggag 38598599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 32197381 - 32197519
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    ||||| || |||||||| || |||| ||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  32197381 ctccgatcctatttacatgaaacaatttattttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattcaatgt 32197480  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||| ||||||||||||| |||||||||||||||    
T  32197481 atctaaaaaatcaactttctcttgtaaataggaccggag 32197519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 418 - 558
Target Start/End: Complemental strand, 11711472 - 11711332
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||     
T  11711472 actccctccggtcctatttacaagagacaatttacttttaagatacattaaataatttatgtatttgacttaggttcttgactagatacatacattattc 11711373  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||||||| |||||||||| ||||| |  ||||||||||||    
T  11711372 aatgtatctaaaaagtcaattttctttcgtaaataggaccg 11711332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 432 - 556
Target Start/End: Complemental strand, 45065714 - 45065590
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||  ||||| || | |||||||||||||||||||| |||||||| |||||    
T  45065714 tatttacaagagacaatttactttttagatacattaaataatttatgtatttaatttagattctagactagatacatacattattcaatgtatctaaaaa 45065615  T
Q  532 gtcaactttctcttataaataggac 556  Q
    ||||||||||| |||||||||||||    
T  45065614 gtcaactttcttttataaataggac 45065590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 44737425 - 44737288
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||| |||| || || ||||||||||||||||||| |||||    
T  44737425 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttgg-ttagattcttaactagatacatacattattcaatgt 44737327  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||| |||||||| |||||| ||||||||    
T  44737326 atctaaaaagtcaattttctcttgtaaataagaccggag 44737288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 432 - 553
Target Start/End: Original strand, 32880921 - 32881042
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||| |||| |||||    
T  32880921 tatttacaagagacaatttactttttatatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattcaatatatctaaaaa 32881020  T
Q  532 gtcaactttctcttataaatag 553  Q
    ||||||||| |||| |||||||    
T  32881021 gtcaactttatcttgtaaatag 32881042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 423 - 558
Target Start/End: Original strand, 18452574 - 18452708
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||| ||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| ||| |    
T  18452574 ctccagtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacattattcaatat 18452673  T
Q  523 atccaaaaagtcaactttctcttataaataggaccg 558  Q
    ||  |||||||||||| |||||| ||||||||||||    
T  18452674 at-taaaaagtcaactgtctcttgtaaataggaccg 18452708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 30864823 - 30864673
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt- 516  Q
    |||| |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| ||||||     
T  30864823 actccctccagtcttatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattc 30864724  T
Q  517 ------taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
          |||| |||| |||||||||| |||||||| | |||||||||||||    
T  30864723 aatgtataatatatctaaaaagtcaattttctcttgtcaataggaccggag 30864673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 440 - 560
Target Start/End: Original strand, 42341640 - 42341760
Alignment:
Q  440 agagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactt 539  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||| || |||| ||||||||||||||||| |||||||  ||||| |||| ||    
T  42341640 agagacaatttactttttaaatacattaaataatttatgtatttggtttagattcttgattagatacatacattattcaatgtatttaaaaaatcaattt 42341739  T
Q  540 tctcttataaataggaccgga 560  Q
    |||||| ||||||||||||||    
T  42341740 tctcttgtaaataggaccgga 42341760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 418 - 560
Target Start/End: Original strand, 4740710 - 4740852
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| | |||||||| ||| |||||||||||||| |||||||| |||||| |||| |||||||||||||||||     
T  4740710 actccctccggtcctatttacaagaaacaattaactttttatatatattaaataatttatatatttggtataggttcttgattagatacatacattattc 4740809  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||||||  ||||||| ||||||||||| |||||| |||||||    
T  4740810 aatgtatttaaaaagttaactttctcttgtaaataagaccgga 4740852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 432 - 560
Target Start/End: Original strand, 3264936 - 3265060
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| |||||||||||||||||||||||||||||    |||||||| ||| ||||||| |||||||||||||| |||||||| |||||    
T  3264936 tatttacaagagacaatttactttttagatacattaaataatttat----ttggtttaagttcttgactaaatacatacattattcaatgtatctaaaaa 3265031  T
Q  532 gtcaactttctcttataaataggaccgga 560  Q
     ||||| || |||||||||||| ||||||    
T  3265032 atcaacattatcttataaatagaaccgga 3265060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 418 - 560
Target Start/End: Original strand, 39377836 - 39377973
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||     |||||||| | ||||||| |||||||    
T  39377836 actccctccggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt-----ttattgaccaaatacataaattattt 39377930  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
     ||||||| ||||||| || | |||||| ||||||||||||||    
T  39377931 gatgtatctaaaaagtaaattgtctcttgtaaataggaccgga 39377973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 427 - 558
Target Start/End: Complemental strand, 41205629 - 41205498
Alignment:
Q  427 ggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatcc 526  Q
    |||| |||||| |||||| || | | |||||||||| ||||||||||||||||||||||||||  || || |||||||||||| |||||| ||| ||||     
T  41205629 ggtcctatttataagagataattaattttttagatatattaaataatttatgtatttggtttatattttttactagatacataaattattcaatatatct 41205530  T
Q  527 aaaaagtcaactttctcttataaataggaccg 558  Q
    ||||| |||||||||||||||||||| |||||    
T  41205529 aaaaaatcaactttctcttataaataagaccg 41205498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 489 - 561
Target Start/End: Original strand, 20360515 - 20360587
Alignment:
Q  489 aggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| |||||||    
T  20360515 aggttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctcttataaatagaaccggag 20360587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 455 - 561
Target Start/End: Original strand, 33913188 - 33913294
Alignment:
Q  455 tttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaatagg 554  Q
    |||||||| ||||||||||||||||||||||||||| || | |||||||||||||| ||||||||| |||  ||||| |||||||| | || ||||||||    
T  33913188 tttagatatattaaataatttatgtatttggtttagattctcgactagatacatacgttatttaatatatttaaaaaatcaactttatattgtaaatagg 33913287  T
Q  555 accggag 561  Q
    | |||||    
T  33913288 atcggag 33913294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 424 - 561
Target Start/End: Complemental strand, 39377973 - 39377841
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||       ||  || | ||||||| ||||||| |||||    
T  39377973 tccggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt-----caataaaccaaatacataaattatttgatgta 39377879  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || ||||||| || | |||||| |||||||||||||||    
T  39377878 tctaaaaagtaaattgtctcttgtaaataggaccggag 39377841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 6761613 - 6761470
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||  ||   ||  || | ||||||| ||||||     
T  6761613 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattattc 6761514  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  6761513 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 6761470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 453 - 536
Target Start/End: Complemental strand, 22857917 - 22857834
Alignment:
Q  453 tttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaa 536  Q
    |||||||||||| | ||||||||||||||||||||||| || | ||  ||||||||| |||||| |||||||| ||||||||||    
T  22857917 tttttagatacaatgaataatttatgtatttggtttagattctagatcagatacataaattattcaatgtatctaaaaagtcaa 22857834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 44737283 - 44737425
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || | |||||||||||||||| |||||| ||||||| | ||| ||  |  | || | ||||||| ||||||     
T  44737283 actccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaat-ctaaccaaatacataaattattc 44737381  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  44737382 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 44737425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 9152379 - 9152522
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||  | ||||||| ||  |||||||||||| ||||||||||| ||  || | ||||||||||||  |||| |     
T  9152379 actccctccggtcctatttacaagaaacatttgacttttttgagtcattaaataattgatgtatttggtctatattttagactagatacatcaattactc 9152478  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| |||||||||| | | |||| |||||| ||||||||    
T  9152479 aatgaatctaaaaagtcaattgtttcttgtaaataagaccggag 9152522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 16241267 - 16241410
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||||||     
T  16241267 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattc 16241366  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  16241367 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 16241410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 40430751 - 40430809
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | ||||||||||||||||||||||    
T  40430751 atacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccggag 40430809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 493 - 555
Target Start/End: Complemental strand, 42470984 - 42470922
Alignment:
Q  493 tattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaatagga 555  Q
    ||||||||||||| |||||||||| |||||||| | ||| |||||||||| ||||||||||||    
T  42470984 tattgactagatatatacattattcaatgtatctacaaaatcaactttcttttataaatagga 42470922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 9152527 - 9152384
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| | ||||||||||| |||| | ||||| |||||| | || ||   ||| ||| | ||||||  |||||||    
T  9152527 actccctccggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattattt 9152428  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||  || |||||||||| | | |||| |||||||||||||||    
T  9152427 aatgactcaaaaaagtcaaatgtttcttgtaaataggaccggag 9152384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 45034545 - 45034403
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||| || |||| |||| ||||||||| ||| |||| |||| || ||||||||||| ||  || | |  ||| |||||  ||||||     
T  45034545 actccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattg 45034447  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| ||||||| |||||| ||||||||||||||||||||    
T  45034446 aatgaatctaaaaagttaactttttcttataaataggaccggag 45034403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 490
Target Start/End: Original strand, 27182089 - 27182147
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttag 490  Q
    ||||||||||| |||| | | |||| ||||||||| |||||||||||||||||||||||    
T  27182089 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggtttag 27182147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 490
Target Start/End: Original strand, 27831631 - 27831689
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttag 490  Q
    ||||||||||| |||| | | |||| ||||||||| |||||||||||||||||||||||    
T  27831631 tatttacaagaaacaattgatttttcagatacattgaataatttatgtatttggtttag 27831689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 29866145 - 29866087
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  29866145 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 29866087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 41260088 - 41260030
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  41260088 atacataaattatttaatgtatcaaaaaagtaaattgtctcttgtaaataggaccggag 41260030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 557
Target Start/End: Original strand, 7765794 - 7765933
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||  ||    |  |  | |||||||  |||||    
T  7765794 actccctccggtcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataatttatt 7765892  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    ||||||||| ||||||| || | ||||||||||||||||||    
T  7765893 taatgtatctaaaaagtaaattgtctcttataaataggacc 7765933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 486
Target Start/End: Complemental strand, 12486140 - 12486072
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggt 486  Q
    |||| ||| |||| ||||||||||| |||| | ||||||||||| |||| ||||||| |||||||||||    
T  12486140 actccctctggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggt 12486072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 13775859 - 13775796
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| |||||| |||||| ||||| ||||||||||||||||||||||| |||||||    
T  13775859 actccctccggtcctatttataagaga-aagttgactttttagatacattaaataatgtatgtat 13775796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 486
Target Start/End: Complemental strand, 27596797 - 27596729
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggt 486  Q
    |||| |||||||| ||||||  | |||| | | |||||||||||||||| |||||||||||||||||||    
T  27596797 actccctccggtcctatttatgaaagacgattgactttttagatacattgaataatttatgtatttggt 27596729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 32750342 - 32750405
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  32750342 actccctccggtcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtat 32750405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 486
Target Start/End: Complemental strand, 38598599 - 38598536
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggt 486  Q
    |||||||| ||||||||| ||| |  |||||||||||||||||| |||||| ||||||| ||||    
T  38598599 ctccggtcctatttacaaaagaaagtttactttttagatacattgaataatatatgtatctggt 38598536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 11711409 - 11711467
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| |||||||||||||||  |||||| || | |||||| |||||||||||||||    
T  11711409 atacataaattatttaatgtatcttaaaagtaaattgtctcttgtaaataggaccggag 11711467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 497 - 551
Target Start/End: Complemental strand, 13021770 - 13021716
Alignment:
Q  497 gactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaat 551  Q
    |||||||||||||  ||||| |||| ||| ||||||| |||||||||||||||||    
T  13021770 gactagatacataatttattaaatgaatctaaaaagttaactttctcttataaat 13021716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 13775774 - 13775716
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| |||||||||| |||| ||||||| || | |||||| |||||||||||||||    
T  13775774 atacataaattatttaatatatctaaaaagtaaattatctcttgtaaataggaccggag 13775716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 20427064 - 20427006
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| |||||||||| |||| ||||||| || | |||||| |||||||||||||||    
T  20427064 atacataaattatttaatctatctaaaaagtaaattgtctcttgtaaataggaccggag 20427006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 463 - 561
Target Start/End: Complemental strand, 20555361 - 20555263
Alignment:
Q  463 cattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||| |||| | ||||||||||| ||  || | ||| ||||||||  |||||| |||||||| ||||| | || ||| ||||||||||||||||||||    
T  20555361 cattacataaataatgtatttggtctatattctagacaagatacatcaattattcaatgtatctaaaaaattaattttttcttataaataggaccggag 20555263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 25892029 - 25892087
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| |||||| |||||||| ||||||| || | |||||| |||||||||||||||    
T  25892029 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 25892087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 451 - 553
Target Start/End: Complemental strand, 28249048 - 28248946
Alignment:
Q  451 actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaa 550  Q
    ||||||||||| |||||||||||| ||||||||||| |||  ||| ||||| ||||||   ||||  |||  ||| |||||||||| | | |||||||||    
T  28249048 actttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaaagtcaaatatttcttataaa 28248949  T
Q  551 tag 553  Q
    |||    
T  28248948 tag 28248946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 553
Target Start/End: Original strand, 28249026 - 28249068
Alignment:
Q  511 attatttaatgtatccaaaaagtcaactttctcttataaatag 553  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||    
T  28249026 attatttaatgaatctaaaaagtcaactttttcttataaatag 28249068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 436 - 481
Target Start/End: Original strand, 22857822 - 22857867
Alignment:
Q  436 tacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    ||||||| |||| | |||||||||||||||| ||||||||||||||    
T  22857822 tacaagaaacaattgactttttagatacattgaataatttatgtat 22857867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 556
Target Start/End: Original strand, 43658010 - 43658063
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggac 556  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| ||||||||||    
T  43658010 atacataaattatttaatgtatctaaaaagtaaattatctcttgtaaataggac 43658063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 531
Target Start/End: Complemental strand, 44736911 - 44736814
Alignment:
Q  434 tttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||| |||| | ||||||||||||| ||| |||| |||||||||||| |||| || | | |||||| |||| |||| | ||| |||| |||||    
T  44736911 tttacaagaaacaattgactttttagatacgttagataaattatgtatttggcttagattctagtctagatgcataaattaatcaatatatctaaaaa 44736814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 426 - 486
Target Start/End: Complemental strand, 3037865 - 3037805
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggt 486  Q
    ||||| ||| ||||||| |||| | | ||||||||| |||| |||||||||||||||||||    
T  3037865 cggtcctatatacaagaaacaaatgattttttagattcattgaataatttatgtatttggt 3037805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 501 - 561
Target Start/End: Complemental strand, 36881598 - 36881538
Alignment:
Q  501 agatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||  |||| | |||||||| |||||||||| ||| |||||||||||| |||||||    
T  36881598 agatacattaattactcaatgtatctaaaaagtcaaatttttcttataaatagaaccggag 36881538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 43657925 - 43657988
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||| |||||| | ||||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  43657925 actccctccggacttatttacaagaga-aagttgactttttagatacattgaataatgtatgtat 43657988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 112; Significance: 2e-56; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 29244 - 29387
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  29244 actccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattc 29343  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  29344 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 29387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 29387 - 29249
Alignment:
Q  423 ctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||||||    
T  29387 ctccggtcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatg 29289  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||||||| || | | |||| |||||||||||||||    
T  29288 tatctaaaaagtaaattgtttcttgtaaataggaccggag 29249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 5347870 - 5347728
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  5347870 actccctccggtcctatttacaagagacaatttactttt-agatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattg 5347772  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  5347771 aatgtatctaaaaagtcaactttctcttataaataggaccggag 5347728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 424 - 561
Target Start/End: Original strand, 3411338 - 3411475
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||    
T  3411338 tccggtcttatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaggtacatacattattcaatgta 3411437  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || |||||||||| |||||||||||||||||| |||||    
T  3411438 tctaaaaagtcaaatttctcttataaataggatcggag 3411475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 7107630 - 7107773
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||     
T  7107630 actcactccggtcatatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagatttttgactagatacataaattattc 7107729  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  7107730 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 7107773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 12763237 - 12763372
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  12763237 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 12763336  T
Q  526 caaaaagtcaactttctcttataaataggaccggag 561  Q
     |||||||||| |||||||| |||||| ||||||||    
T  12763337 taaaaagtcaattttctcttgtaaataagaccggag 12763372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 23248811 - 23248673
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||    
T  23248811 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattattcaatgt 23248712  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||||| |||| |||||||||||||||    
T  23248711 atctaaaaagtcaactttatcttgtaaataggaccggag 23248673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 424 - 561
Target Start/End: Original strand, 30866251 - 30866388
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  30866251 tccggtcctatttaaaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattgaatgta 30866350  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || ||||| ||||||||||||| |||||| ||||||||    
T  30866351 tctaaaaaatcaactttctcttgtaaataagaccggag 30866388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 34281803 - 34281674
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||  |||||    
T  34281803 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatgtaaaaa 34281704  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    |||||||||||||| |||||||||||||||    
T  34281703 gtcaactttctcttgtaaataggaccggag 34281674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 20397815 - 20397958
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||     
T  20397815 actccctccggtcctatttataagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattc 20397914  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  20397915 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 20397958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 423 - 558
Target Start/End: Complemental strand, 5909614 - 5909479
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||    
T  5909614 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattattgaatgt 5909515  T
Q  523 atccaaaaagtcaactttctcttataaataggaccg 558  Q
    ||| |||| ||||| |||||||| ||||||||||||    
T  5909514 atctaaaaggtcaattttctcttgtaaataggaccg 5909479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 12426673 - 12426535
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| |||||    
T  12426673 ctccggtcttatttacaagagacagtttactttttagatacattaaataatttacgtatttggtttagattcttgactagatacatacattattcaatgt 12426574  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||| | |||||||||||||||||| ||||||||    
T  12426573 atctaaaaaattaactttctcttataaataagaccggag 12426535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 35427807 - 35427664
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||     
T  35427807 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgtttttgactatatacatacattattg 35427708  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||  ||||  |||| ||| ||||||||||||||||||||    
T  35427707 aatgtatttaaaagatcaattttatcttataaataggaccggag 35427664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 442 - 560
Target Start/End: Original strand, 29770346 - 29770464
Alignment:
Q  442 agacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttc 541  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| ||||||||||||||     
T  29770346 agacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatgcattattcaatgtatctaaaaagtcaacttta 29770445  T
Q  542 tcttataaataggaccgga 560  Q
     ||||||||||||||||||    
T  29770446 acttataaataggaccgga 29770464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 422 - 561
Target Start/End: Complemental strand, 32050224 - 32050085
Alignment:
Q  422 tctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    |||||| || |||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |||||| |||| ||||||||||||||||| |||     
T  32050224 tctccgatcttatttacaagagacaatttactttttagatatattaaataatttatgtatttggtgtaggttcttgagtagatacatacattattcaata 32050125  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||||| |||| |||||||||||||||| |||||||    
T  32050124 tatctaaaaaatcaattttctcttataaatagaaccggag 32050085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 418 - 557
Target Start/End: Original strand, 7463449 - 7463589
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| |||||||||| |||||||| |||||||||||||||||||||| || |||| |||||||||||||||||     
T  7463449 actccctccggtcctatttacaagaaacaatttactttttaaatacattacataatttatgtatttggtttagattcttgattagatacatacattattc 7463548  T
Q  518 aatgtatc-caaaaagtcaactttctcttataaataggacc 557  Q
    ||||||||  |||||||||| ||||||||||||||||||||    
T  7463549 aatgtatctaaaaaagtcaattttctcttataaataggacc 7463589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 418 - 558
Target Start/End: Complemental strand, 10599464 - 10599323
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||| || |||||||||||||||| ||| |||||||||||||  |||||||||||||||||||||||||  ||||||||||||||||||||||     
T  10599464 actccctccgatcctatttacaagagacaatttattttttagatacatacaataatttatgtatttggtttaggtgtttgactagatacatacattattc 10599365  T
Q  518 aatgtatc-caaaaagtcaactttctcttataaataggaccg 558  Q
    ||||||||  |||||||||||||| |||| ||||||||||||    
T  10599364 aatgtatctaaaaaagtcaactttatcttgtaaataggaccg 10599323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 433 - 552
Target Start/End: Complemental strand, 19979627 - 19979507
Alignment:
Q  433 atttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc-caaaaa 531  Q
    |||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||||  |||||    
T  19979627 atttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaa 19979528  T
Q  532 gtcaactttctcttataaata 552  Q
    || ||||||||||||||||||    
T  19979527 gttaactttctcttataaata 19979507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 434 - 560
Target Start/End: Complemental strand, 12085156 - 12085030
Alignment:
Q  434 tttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagt 533  Q
    |||||||||||||  ||| |||||||||||||||||||||||||||||||| |||||||| |||| |  |||||||||||||| |||||||| ||| |||    
T  12085156 tttacaagagacagtttattttttagatacattaaataatttatgtatttgatttaggttcttgatttaatacatacattattcaatgtatctaaacagt 12085057  T
Q  534 caactttctcttataaataggaccgga 560  Q
    ||| |||||||| ||||||||||||||    
T  12085056 caattttctcttgtaaataggaccgga 12085030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 424 - 560
Target Start/End: Original strand, 6173945 - 6174076
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    |||||||||||||||||||||||| |||  |||||||||||   ||  |||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  6173945 tccggtcatatttacaagagacaatttatattttagataca---aaggatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 6174041  T
Q  524 tccaaaaagtcaactttctcttataaataggaccgga 560  Q
    || |||||  |||  ||||||||||||||||||||||    
T  6174042 tctaaaaaaacaa--ttctcttataaataggaccgga 6174076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 427 - 555
Target Start/End: Complemental strand, 46680968 - 46680840
Alignment:
Q  427 ggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatcc 526  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||||| ||||||| || ||||| ||     
T  46680968 ggtcttatttacaagaaacaatttactttttagatacattaaataatttatatatttgatttaagttcttgactagatatatacattcttcaatgtgtct 46680869  T
Q  527 aaaaagtcaactttctcttataaatagga 555  Q
    |||||||||| ||| || | |||||||||    
T  46680868 aaaaagtcaattttatcatgtaaatagga 46680840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 418 - 558
Target Start/End: Original strand, 15074622 - 15074758
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| ||||||     |||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||     
T  15074622 actccctccggtcctatttacaagaaacaatttactt-----atacattaaataatttatgtatttggtttaagttcttgactagatacatacattattc 15074716  T
Q  518 aatgtatccaaaa-agtcaactttctcttataaataggaccg 558  Q
     ||||||| |||| | | | ||||||||| |||| |||||||    
T  15074717 gatgtatctaaaagaatgatctttctcttgtaaacaggaccg 15074758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 424 - 552
Target Start/End: Complemental strand, 17351613 - 17351486
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||| ||||||||| | | ||||||||||| |||||||||||||||||||  ||||| || |||| |||||||||| |||||| ||||||    
T  17351613 tccggtcctatttaaaagagacaattaattttttagatacgttaaataatttatgtattt-atttagattcttgagtagatacataaattattcaatgta 17351515  T
Q  524 tccaaaaagtcaactttctcttataaata 552  Q
    || || || ||||||||||| ||||||||    
T  17351514 tctaacaaatcaactttctcctataaata 17351486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 432 - 539
Target Start/End: Complemental strand, 46449912 - 46449805
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| | | |||||| |||||||||||||||||| |||||||||||| || || | || ||||||| |||||| |||||||| |||||    
T  46449912 tatttacaagagacaattaattttttaaatacattaaataatttatatatttggtttagatttttaattaaatacataaattattcaatgtatctaaaaa 46449813  T
Q  532 gtcaactt 539  Q
    ||||||||    
T  46449812 gtcaactt 46449805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 20397963 - 20397820
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||  ||  | |  || | ||||||| ||||||    
T  20397963 actccctccggtcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaacaaaatacataaattatt 20397865  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| ||||| | || | ||||||||||||||||||||||    
T  20397864 taatgtatctaaaaattaaattgtctcttataaataggaccggag 20397820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 434 - 556
Target Start/End: Original strand, 26563937 - 26564059
Alignment:
Q  434 tttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagt 533  Q
    |||||||||  ||| | |||||||||||| ||| ||||| ||||||||||||||||| || | ||| |||||| || |||||| ||||||||  ||||||    
T  26563937 tttacaagaagcaattaactttttagatatattgaataaattatgtatttggtttagattctagaccagatacgtaaattattcaatgtatctgaaaagt 26564036  T
Q  534 caactttctcttataaataggac 556  Q
    ||| | | |||| ||||||||||    
T  26564037 caattgtttcttgtaaataggac 26564059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 558
Target Start/End: Complemental strand, 12763377 - 12763237
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||    
T  12763377 actccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 12763278  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||||||| ||||||| || | |||||| ||||||||||||    
T  12763277 aatgtatctaaaaagtaaattgtctcttgtaaataggaccg 12763237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 23248668 - 23248811
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||| | ||||| |||||||||||||||| |||||| ||||||||| ||  ||    |  || | ||||||| ||||||    
T  23248668 actccctccggtcctatttacaagata-aagttgactttttagatacattgaataatatatgtatttagtcaagaacctaaaccaaatacataaattatt 23248766  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| ||||||| || | |||||| |||||||||||||||    
T  23248767 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 23248811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 5909479 - 5909614
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| ||||||||||||| || | || ||||||||||||| |||||| ||| ||||| ||  ||    |  || | ||||||| |||||||||||||||    
T  5909479 cggtcctatttacaagagaaaattgaccttttagatacattcaataatgtatatatttagtcaagaacctaaaccaaatacataaattatttaatgtatc 5909578  T
Q  526 caaaaagtcaactttctcttataaataggaccggag 561  Q
     ||||||| || | |||||| |||||||||||||||    
T  5909579 taaaaagtaaattgtctcttgtaaataggaccggag 5909614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 481
Target Start/End: Complemental strand, 7107773 - 7107715
Alignment:
Q  423 ctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||| ||||||||||||||    
T  7107773 ctccggtcctatttacaagaga-aagttgactttttagatacattgaataatttatgtat 7107715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 27231834 - 27231976
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||  | |||| |||| ||||||||| ||| |||| |||| || ||||||||||| ||  || | | |||| |||||  ||||||     
T  27231834 actccctccggtcctatacataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattg 27231932  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| ||||||| |||||| ||||||||||||||||||||    
T  27231933 aatgaatctaaaaagttaactttttcttataaataggaccggag 27231976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 560
Target Start/End: Complemental strand, 30866393 - 30866251
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| | |||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||||||    
T  30866393 actccctccggtcttatttacaagaga-aagttgattttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 30866295  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||||| ||||||| || | |||||| ||||||||||||||    
T  30866294 taatgtatctaaaaagtaaattgtctcttttaaataggaccgga 30866251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 552
Target Start/End: Original strand, 36655434 - 36655493
Alignment:
Q  493 tattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaata 552  Q
    ||||||||||||||||||||| || |||||||| ||||| |||| |||||||| ||||||    
T  36655434 tattgactagatacatacattgttcaatgtatctaaaaattcaattttctcttgtaaata 36655493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 35427744 - 35427802
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  35427744 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 35427802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 501 - 561
Target Start/End: Original strand, 10007659 - 10007719
Alignment:
Q  501 agatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||  |||||  |||| ||| |||||||||||||| ||||||||||||||||||||    
T  10007659 agatacattaattatacaatgaatctaaaaagtcaactttttcttataaataggaccggag 10007719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 12426530 - 12426673
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttacttttt-agatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| |||||| |||||| |||||| ||||| ||||||||| |||||| ||||||| | ||  ||  | |  || | |||| || ||||||    
T  12426530 actccctccggtcttatttataagaga-aagttaattttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacgtaaattatt 12426628  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| ||||||| |||| |||||| |||||| ||||||||    
T  12426629 taatgtatctaaaaagtaaactgtctcttgtaaataagaccggag 12426673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 561
Target Start/End: Original strand, 2523870 - 2523913
Alignment:
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||    
T  2523870 aatgaatctaaaaagtcaactttttcttataaataggaccggag 2523913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 552
Target Start/End: Original strand, 34281669 - 34281803
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||| ||||||| |||||| ||||||||| ||  ||    |  || | ||||||| ||||||    
T  34281669 actccctccggtcctatttacaagaga-aagttgactttttacatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatt 34281767  T
Q  517 taatgtatccaaaaagtcaactttctcttataaata 552  Q
    ||||||||| ||||||| || | |||||| ||||||    
T  34281768 taatgtatctaaaaagtaaattgtctcttgtaaata 34281803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 482
Target Start/End: Original strand, 12085030 - 12085088
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatt 482  Q
    ||||||| ||||||||||||| || | ||| |||||||||||| |||||| ||||||||    
T  12085030 tccggtcctatttacaagagaaaattgactgtttagatacattgaataatgtatgtatt 12085088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Complemental strand, 3411395 - 3411338
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||| |||||||    
T  3411395 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataagaccgga 3411338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 5347723 - 5347786
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| |||||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  5347723 actccctccggtcctatttataagaga-aagttgactttttagatacattcaataatgtatgtat 5347786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 432 - 536
Target Start/End: Complemental strand, 22055864 - 22055760
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||| | |||| | ||||||||  || ||| |||||||||| |||||||||||  || || |||  ||||||| |||||| ||| |||| |||||    
T  22055864 tatttacaaaaaacaattgactttttacgtatattgaataatttatttatttggtttaaattctttactgaatacataaattattcaatatatctaaaaa 22055765  T
Q  532 gtcaa 536  Q
    |||||    
T  22055764 gtcaa 22055760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 486
Target Start/End: Complemental strand, 26564069 - 26564001
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggt 486  Q
    ||||||| | ||| ||||||||||| |||| | |||||| ||||||||| ||||||||| |||| ||||    
T  26564069 actctctgctgtcctatttacaagaaacaattgacttttcagatacattgaataatttacgtatctggt 26564001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 483
Target Start/End: Original strand, 46449811 - 46449843
Alignment:
Q  451 actttttagatacattaaataatttatgtattt 483  Q
    |||||||||||||||| ||||||||||||||||    
T  46449811 actttttagatacattgaataatttatgtattt 46449843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 112; Significance: 2e-56; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 31803106 - 31802963
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  31803106 actccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatatatacattattc 31803007  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  31803006 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 31802963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 41989569 - 41989707
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  41989569 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 41989668  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||||||||||||||||| |||||||||| ||||    
T  41989669 atctaaaaagtcaactttctcttttaaataggactggag 41989707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 418 - 560
Target Start/End: Complemental strand, 9601741 - 9601599
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||     
T  9601741 actccctccggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggtttagatttttgactagatacatacattattc 9601642  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||||||| ||||||||||||||||||| ||||||||||||||    
T  9601641 aatgtatctaaaaagtcaactttctcttgtaaataggaccgga 9601599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 13144885 - 13145023
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  13144885 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 13144984  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||| |||||| |||||| |||||||||||||||    
T  13144985 atctaaaaaatcaactgtctcttgtaaataggaccggag 13145023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 106; E-Value: 9e-53
Query Start/End: Original strand, 424 - 561
Target Start/End: Complemental strand, 37699922 - 37699785
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  37699922 tccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 37699823  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || |||||||||||| |||||| |||||||||||||||    
T  37699822 tctaaaaagtcaactgtctcttgtaaataggaccggag 37699785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 418 - 558
Target Start/End: Original strand, 7749918 - 7750058
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||     
T  7749918 actccctccggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagattcttgactagatacatacattattc 7750017  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||||||| ||||||||||||||||||| ||||||||||||    
T  7750018 aatgtatctaaaaagtcaactttctcttgtaaataggaccg 7750058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 25027699 - 25027837
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| |||||    
T  25027699 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatatatacattattcaatgt 25027798  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  25027799 atctaaaaagtcaactgtctcttgtaaataggaccggag 25027837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 418 - 560
Target Start/End: Complemental strand, 6338463 - 6338321
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||| ||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||     
T  6338463 actccctccagtcctatttacaaaagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattc 6338364  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||    
T  6338363 aatgtatctaaaaagtcaacttcctcttataaataggatcgga 6338321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 29374175 - 29374313
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    ||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  29374175 ctccgatcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgacgagatacatacattattcaatgt 29374274  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  29374275 atctaaaaagtcaactgtctcttgtaaataggaccggag 29374313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 432 - 561
Target Start/End: Original strand, 26898205 - 26898334
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||| |||||    
T  26898205 tatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgcatctaaaaa 26898304  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    |||||||||||||| |||||||||||||||    
T  26898305 gtcaactttctcttgtaaataggaccggag 26898334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 904114 - 903971
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||  ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||     
T  904114 actccctccggttctatttacaataaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacacacattattc 904015  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||| ||||||||||||||||||| |||||||||||||||    
T  904014 aatatatctaaaaagtcaactttctcttgtaaataggaccggag 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 7053648 - 7053790
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||     
T  7053648 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggctcttgactagatacatacattattc 7053747  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||  ||||||||||| ||||||| |||||||||||||||    
T  7053748 aatgtatttaaaaagtcaac-ttctcttgtaaataggaccggag 7053790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 426 - 553
Target Start/End: Complemental strand, 20578795 - 20578668
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| ||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||    
T  20578795 cggtcctatttacaatagacaatttactttttatatacattaaataatttatgtatttggtttaggttattgactagatagatatattattcaatgtatc 20578696  T
Q  526 caaaaagtcaactttctcttataaatag 553  Q
     |||||||||||||||||||||||||||    
T  20578695 taaaaagtcaactttctcttataaatag 20578668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 23411165 - 23411308
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  23411165 actccctccggtcatatttataagatacaaattactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattc 23411264  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| |||| |||||||| |||||| ||||||||    
T  23411265 aatgtatctaaaaaatcaattttctcttgtaaataagaccggag 23411308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 1643349 - 1643487
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||||||||| |||||| |||||||||||||||||| || |||||||||||||| ||||| || |||||||||||||||||||||| |||||    
T  1643349 ctccggtcctatttacaatagacaatttactttttagatacattgaaaaatttatgtatttgatttagattcttgactagatacatacattattgaatgt 1643448  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| ||||||||||||||||||||||    
T  1643449 atctaaaaagtcaactgtctcttataaataggaccggag 1643487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 423 - 553
Target Start/End: Complemental strand, 15569474 - 15569344
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| |||||||||| |||||    
T  15569474 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgattagatatatacattattcaatgt 15569375  T
Q  523 atccaaaaagtcaactttctcttataaatag 553  Q
    ||| ||||||||||||||||||| |||||||    
T  15569374 atctaaaaagtcaactttctcttgtaaatag 15569344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 36419119 - 36418990
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||    
T  36419119 tatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgtatcaaaaaa 36419020  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
     |||||||| |||| |||||||||||||||    
T  36419019 atcaactttatcttgtaaataggaccggag 36418990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 423 - 552
Target Start/End: Original strand, 41046833 - 41046962
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||||    
T  41046833 ctccggtcctatttacaagagacaatctactttttagatacattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgt 41046932  T
Q  523 atccaaaaagtcaactttctcttataaata 552  Q
    ||| ||||| ||||||||||||||||||||    
T  41046933 atctaaaaaatcaactttctcttataaata 41046962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 36417195 - 36417052
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||| |||| |||||| |||| |||| ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||     
T  36417195 actccctctggtcctatttataagaaacaatttactttttagatacattaaataatttatgtatttggattaggttcttgactagatacatacattattc 36417096  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||  |||||||||| |||||||| |||||||||||||||    
T  36417095 aatgtatttaaaaagtcaaatttctcttgtaaataggaccggag 36417052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 418 - 556
Target Start/End: Complemental strand, 18353356 - 18353218
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||     
T  18353356 actccctccgatcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattc 18353257  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggac 556  Q
    |||||||  ||||| ||||||||||||| ||||||||||    
T  18353256 aatgtatgtaaaaaatcaactttctcttgtaaataggac 18353218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 7945837 - 7945980
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||||||||     
T  7945837 actccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatatatttggtttagattcttgactagatacatacattattc 7945936  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| | ||||||||| |||| |||| |||||    
T  7945937 aatgtatctaaaaagtgatctttctcttgtaaacaggatcggag 7945980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 424 - 561
Target Start/End: Original strand, 1108289 - 1108426
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||||||||||||| |||| |    
T  1108289 tccggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaggttcttgactagatacatacattattcaatgca 1108388  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || ||||  |||||||| |||  |||||||||||||||    
T  1108389 tctaaaagatcaactttatctcgtaaataggaccggag 1108426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 42311944 - 42311815
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||  |||||    
T  42311944 tatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaagtttttgactaaatacatacattattcaatgtatttaaaaa 42311845  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    ||||| ||| |||| |||||||||||||||    
T  42311844 gtcaattttttcttgtaaataggaccggag 42311815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 418 - 560
Target Start/End: Complemental strand, 21610449 - 21610307
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| | |||||||| |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||     
T  21610449 actccctccggtcctatttacaagaaacaattaactttttatatacattaaataatttatgtatttggtttaggttcttgactaaatatatacattattc 21610350  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||||||| ||||||| |||||| |||| ||||||||| ||||    
T  21610349 aatgtatctaaaaagttaactttatcttgtaaataggatcgga 21610307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 432 - 558
Target Start/End: Original strand, 41815199 - 41815325
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||| | |||| |||||||||| |||||||||||||||||||||||||||| ||||| ||||||| |||| ||||||||| |||||||| |||||    
T  41815199 tatttacaataaacaatttactttttaaatacattaaataatttatgtatttggttcaggttcttgactaaatacgtacattattcaatgtatctaaaaa 41815298  T
Q  532 gtcaactttctcttataaataggaccg 558  Q
    |||||||||||||| ||||||||||||    
T  41815299 gtcaactttctcttgtaaataggaccg 41815325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 424 - 561
Target Start/End: Complemental strand, 2959381 - 2959244
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||  || ||||||||||| ||||||| || ||||||    
T  2959381 tccggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattcttcaatgta 2959282  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || |||||||||| |||||||| |||||||||||||||    
T  2959281 tctaaaaagtcaattttctcttgtaaataggaccggag 2959244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 424 - 561
Target Start/End: Complemental strand, 2967850 - 2967713
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||||||| |||||||||| ||||  || ||||||||||| ||||||| || ||||||    
T  2967850 tccggtcctatttacaagaaacaatttactttttagatacattaaataatatatgtatttgatttaaattcttgactagatatatacattcttcaatgta 2967751  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || |||||||||| |||||||| |||||||||||||||    
T  2967750 tctaaaaagtcaattttctcttgtaaataggaccggag 2967713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 21090510 - 21090381
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||| || |||||| |||||||||| |||||||||||||| |||||||||||||||| || |||||||||||||||||||||| |||||||| |||||    
T  21090510 tatttaaaaaagacaatttactttttaaatacattaaataatgtatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaa 21090411  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    || || |||||||| |||||||||||||||    
T  21090410 gttaattttctcttgtaaataggaccggag 21090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 453 - 560
Target Start/End: Original strand, 2825895 - 2826002
Alignment:
Q  453 tttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaata 552  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||    
T  2825895 tttttagatacattaaataatttatgtatttggtttaggttcttaactagatacatacattattcaatgtatctaaaaagtcaattttctcttgtaaata 2825994  T
Q  553 ggaccgga 560  Q
    ||| ||||    
T  2825995 ggagcgga 2826002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 432 - 560
Target Start/End: Original strand, 6910726 - 6910854
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||||||||| ||||| || |||||||||| ||||||||||| ||| |||| |||||    
T  6910726 tatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttagattcttgactagatgcatacattattcaatatatctaaaaa 6910825  T
Q  532 gtcaactttctcttataaataggaccgga 560  Q
    ||||||||| | || |||| |||||||||    
T  6910826 gtcaactttgtattgtaaacaggaccgga 6910854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 426 - 560
Target Start/End: Complemental strand, 16089228 - 16089092
Alignment:
Q  426 cggtcatatttacaagagacaagttacttttt-agatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtat 524  Q
    ||||| |||||||||||||||| ||| ||||| ||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||     
T  16089228 cggtcctatttacaagagacaatttatttttttagatatattaaataatttatgtatttggtttaggttcatgactagatacatacattattcaatgtac 16089129  T
Q  525 c-caaaaagtcaactttctcttataaataggaccgga 560  Q
    |  ||||| |||||||| |||||||||||||| ||||    
T  16089128 ctaaaaaaatcaactttatcttataaataggatcgga 16089092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 427 - 561
Target Start/End: Original strand, 14338824 - 14338958
Alignment:
Q  427 ggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatcc 526  Q
    |||| |||||||||||||||| | | |||||||||| ||||||||||||||||||||||||||  || |||| |||||||||| |||||| ||||||||     
T  14338824 ggtcttatttacaagagacaattaattttttagataaattaaataatttatgtatttggtttaaattcttgaatagatacataaattattcaatgtatct 14338923  T
Q  527 aaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| || |||||||| |||| || |||||||    
T  14338924 aaaaagttaaatttctcttgtaaaaagaaccggag 14338958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 423 - 524
Target Start/End: Complemental strand, 38393898 - 38393797
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||  ||||||||||| |||| | |||||||| ||| ||| ||||||||||| ||||| ||||| || ||||||| ||||||| |||||| |||||    
T  38393898 ctccggttctatttacaagaaacaattgactttttaaatatattgaataatttatgaatttgatttagattcttgactatatacataaattattcaatgt 38393799  T
Q  523 at 524  Q
    ||    
T  38393798 at 38393797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 13145028 - 13144885
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | | |||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||    
T  13145028 actccctccggtcctatttacaagagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 13144929  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  13144928 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 13144885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 22731259 - 22731401
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||| || |||| |||| ||||||||| ||| |||| |||| || ||||||||||| ||  || | | |||| |||||  |||||||    
T  22731259 actccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacattaattattt 22731357  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| ||||| | |||||| ||||||||||||||||||||    
T  22731358 aatgaatctaaaaaattaactttttcttataaataggaccggag 22731401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 418 - 560
Target Start/End: Original strand, 37699780 - 37699922
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||||||     
T  37699780 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattc 37699879  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||||||| ||||||| || | |||||| ||||||||||||||    
T  37699880 aatgtatctaaaaagtaaattgtctcttgtaaataggaccgga 37699922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 561
Target Start/End: Complemental strand, 7750058 - 7749923
Alignment:
Q  426 cggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtat 524  Q
    ||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||  ||  | |  || | ||||||| ||||||||||||||    
T  7750058 cggtcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgtat 7749960  T
Q  525 ccaaaaagtcaactttctcttataaataggaccggag 561  Q
    | ||||| | || | |||||| |||||||||||||||    
T  7749959 ctaaaaattaaattgtctcttgtaaataggaccggag 7749923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 15968458 - 15968316
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||| |||| ||| || |||| |||| ||||||||| ||| |||| |||| || ||||||||||| ||  || | | ||||||||||  ||||||     
T  15968458 actccctcaggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctagatacattaattattg 15968360  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| ||||| | |||||| ||||||||||||||||||||    
T  15968359 aatgaatctaaaaaattaactttttcttataaataggaccggag 15968316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 25027842 - 25027699
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||| ||| | ||  ||    |  || | ||||||| ||||||     
T  25027842 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatacataaattattc 25027743  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  25027742 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 25027699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 29374318 - 29374255
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| |||||||    
T  29374318 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 29374255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 7053711 - 7053653
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  7053711 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 7053653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 424 - 561
Target Start/End: Original strand, 9601599 - 9601736
Alignment:
Q  424 tccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||  |   | |  || | ||||||| ||||||| ||||    
T  9601599 tccggtcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtatctagtcaaaaatctaaaccaaatacataaattatttgatgt 9601697  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||||| || | |||||| |||||||||||||||    
T  9601698 atctaaaaagtaaattgtctcttgtaaataggaccggag 9601736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 15569416 - 15569474
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  15569416 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 15569474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 481
Target Start/End: Original strand, 21090381 - 21090439
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||||||| ||||||||||||| || | |||||||||||||||| |||||| |||||||    
T  21090381 ctccggtcctatttacaagagaaaattaactttttagatacattgaataatgtatgtat 21090439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 41989627 - 41989569
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  41989627 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 41989569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 1643492 - 1643429
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| |||||| ||||||||  | |||||||||||||||| |||||| |||||||    
T  1643492 actccctccggtcctatttataagagacagttgactttttagatacattcaataatgtatgtat 1643429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 23411313 - 23411250
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||||||| || | | |||||||||||||| |||||| |||||||    
T  23411313 actccctccggtcttatttacaagagaaaattgattttttagatacattgaataatatatgtat 23411250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 556
Target Start/End: Complemental strand, 26898339 - 26898201
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| ||||||||||| |||| |||||| ||||||||| ||  ||    |  || | ||||||| ||||||    
T  26898339 actccctccggtcctatttacaagaga-aagttgactttttagatgcattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatt 26898241  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggac 556  Q
    ||||||||  ||||||| || | |||||| ||||||||||    
T  26898240 taatgtatttaaaaagtaaattgtctcttgtaaataggac 26898201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 498 - 560
Target Start/End: Complemental strand, 1108351 - 1108289
Alignment:
Q  498 actagatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||| ||||||| ||||||| ||||||| ||||||| || | |||||| ||||||||||||||    
T  1108351 actaaatacataaattattttatgtatctaaaaagtaaattgtctcttgtaaataggaccgga 1108289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 31803043 - 31803101
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | | |||| |||||||||||||||    
T  31803043 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggag 31803101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 557
Target Start/End: Original strand, 36417132 - 36417186
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    ||||||| ||||||||||||||| ||||||| || | | ||||||||||||||||    
T  36417132 atacataaattatttaatgtatctaaaaagtaaattgtttcttataaataggacc 36417186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 41046891 - 41046833
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| |||||||  | | |||||| |||||||||||||||    
T  41046891 atacataaattatttaatgtatctaaaaagtagattgtctcttgtaaataggaccggag 41046833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 481
Target Start/End: Complemental strand, 2825994 - 2825945
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    ||||||||||||| || | |||||||||||||||| |||||| |||||||    
T  2825994 tatttacaagagaaaattgactttttagatacattgaataatgtatgtat 2825945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 2959324 - 2959381
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| ||||||||||||||| ||||||| || | | |||| ||||||||||||||    
T  2959324 atacatatattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccgga 2959381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 2967793 - 2967850
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| ||||||||||||||| ||||||| || | | |||| ||||||||||||||    
T  2967793 atacatatattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccgga 2967850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 482
Target Start/End: Original strand, 7272241 - 7272270
Alignment:
Q  453 tttttagatacattaaataatttatgtatt 482  Q
    ||||||||||||||||||||||||||||||    
T  7272241 tttttagatacattaaataatttatgtatt 7272270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 473
Target Start/End: Original strand, 31802958 - 31803013
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataat 473  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| ||||||    
T  31802958 actccctccggtcctatttacaagaga-aagttgactttttagatacattgaataat 31803013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 42311815 - 42311875
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtattt 483  Q
    |||||||| ||||||||||| | || | |||||||| ||||||| |||||| |||||||||    
T  42311815 ctccggtcctatttacaagaaaaaattgactttttaaatacattgaataatgtatgtattt 42311875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 9e-56; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 424 - 558
Target Start/End: Original strand, 31227277 - 31227411
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  31227277 tccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgta 31227376  T
Q  524 tccaaaaagtcaactttctcttataaataggaccg 558  Q
    || ||||||||||||||||||| ||||||||||||    
T  31227377 tctaaaaagtcaactttctcttgtaaataggaccg 31227411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 424 - 560
Target Start/End: Complemental strand, 31854521 - 31854385
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  31854521 tccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattcaatgta 31854422  T
Q  524 tccaaaaagtcaactttctcttataaataggaccgga 560  Q
    || ||||||||||||||||||| ||| ||||||||||    
T  31854421 tctaaaaagtcaactttctcttgtaattaggaccgga 31854385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 424 - 558
Target Start/End: Complemental strand, 5970421 - 5970287
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  5970421 tccggtcctatttacaagagacaatttactttttagacacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 5970322  T
Q  524 tccaaaaagtcaactttctcttataaataggaccg 558  Q
    || |||||||||||||||| |||||||||||||||    
T  5970321 tctaaaaagtcaactttcttttataaataggaccg 5970287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 36099492 - 36099630
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  36099492 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 36099591  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||| |||||| |||||| |||||||||||||||    
T  36099592 atctaaaaaatcaactgtctcttgtaaataggaccggag 36099630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 38688059 - 38687916
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||     
T  38688059 actccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacgtacattattc 38687960  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||| ||||||||    
T  38687959 aatgtatctaaaaagtcaactttctcttgtaaataagaccggag 38687916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 4758920 - 4758782
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| |||||    
T  4758920 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttaactagatacatacattattcaatgt 4758821  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  4758820 atctaaaaagtcaactgtctcttgtaaataggaccggag 4758782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 418 - 556
Target Start/End: Original strand, 39877403 - 39877541
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  39877403 actccctccggtcctatttacaagaaacgatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattc 39877502  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggac 556  Q
    |||||| | ||||||||||||||||||| ||||||||||    
T  39877503 aatgtacctaaaaagtcaactttctcttgtaaataggac 39877541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 421 - 561
Target Start/End: Original strand, 6246611 - 6246751
Alignment:
Q  421 ctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaat 520  Q
    |||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||| |||||| |||    
T  6246611 ctctccggttctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgaccaaatacatatattattgaat 6246710  T
Q  521 gtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  6246711 gtatctaaaaagtcaactttctcttgtaaataggaccggag 6246751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 427 - 554
Target Start/End: Original strand, 2279533 - 2279660
Alignment:
Q  427 ggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatcc 526  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||     
T  2279533 ggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattgaatgtatct 2279632  T
Q  527 aaaaagtcaactttctcttataaatagg 554  Q
    ||||||||||||||||||| ||||||||    
T  2279633 aaaaagtcaactttctcttgtaaatagg 2279660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 2385343 - 2385200
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||     
T  2385343 actccctctggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtattttgtttagattcttgactagatacatacattattc 2385244  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  2385243 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 2385200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 53621471 - 53621333
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||||||||||| |||||    
T  53621471 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttcattagatacatacattattcaatgt 53621372  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  53621371 atctaaaaagtcaactgtctcttgtaaataggaccggag 53621333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 23125646 - 23125789
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||     
T  23125646 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattc 23125745  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||  ||||||||||||| |||||| ||| ||||    
T  23125746 aatgtatctaaaatatcaactttctcttgtaaataagactggag 23125789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 580554 - 580416
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| || ||    
T  580554 ctccggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattcaacgt 580455  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||| |||||||| ||||||||| |||||    
T  580454 atctaaaaagtcaattttctcttgtaaataggatcggag 580416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 435 - 560
Target Start/End: Original strand, 47948956 - 47949081
Alignment:
Q  435 ttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtc 534  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||| ||||| ||    
T  47948956 ttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgtatctaaaaaatc 47949055  T
Q  535 aactttctcttataaataggaccgga 560  Q
    ||||||||||||||| ||||| ||||    
T  47949056 aactttctcttataattaggatcgga 47949081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 19485572 - 19485715
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||| ||| ||||||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||     
T  19485572 actccctcctgtcctatttacaagaaacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgattagatacatacattattc 19485671  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| |||| |||||||| |||||||||||||||    
T  19485672 aatgtatctaaaaaatcaattttctcttgtaaataggaccggag 19485715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 418 - 557
Target Start/End: Original strand, 21221118 - 21221256
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    ||||||||| ||| ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||     
T  21221118 actctctcctgtcctatttacaaaa-acaatttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatatattattc 21221216  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    |||||||| ||||||| | |||||||||||||| ||||||    
T  21221217 aatgtatctaaaaagtgatctttctcttataaacaggacc 21221256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 426 - 557
Target Start/End: Complemental strand, 18430395 - 18430262
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||     
T  18430395 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgtatt 18430296  T
Q  526 caaaa--agtcaactttctcttataaataggacc 557  Q
     ||||  ||||||||||||||| |||||||||||    
T  18430295 taaaaagagtcaactttctcttgtaaataggacc 18430262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 423 - 557
Target Start/End: Complemental strand, 18135456 - 18135320
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||    
T  18135456 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttgatttaggttcttgactagatacatacattattcaatgt 18135357  T
Q  523 atccaaaa--agtcaactttctcttataaataggacc 557  Q
    ||  ||||  ||||||||||||||| |||||||||||    
T  18135356 atttaaaaagagtcaactttctcttgtaaataggacc 18135320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 420 - 561
Target Start/End: Original strand, 35328941 - 35329082
Alignment:
Q  420 tctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaa 519  Q
    ||||||||||| ||||||||| | | || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  35328941 tctctccggtcctatttacaaaaaataatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 35329040  T
Q  520 tgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||  ||||||| | ||||||||| |||| ||||||||||    
T  35329041 tgtatttaaaaagtgacctttctcttgtaaacaggaccggag 35329082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 432 - 552
Target Start/End: Original strand, 56216248 - 56216368
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | || || |||| |||||||||||||| |||||||| |||||    
T  56216248 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttggattcttaactaaatacatacattattcaatgtatctaaaaa 56216347  T
Q  532 gtcaactttctcttataaata 552  Q
    |||||||||||||||||||||    
T  56216348 gtcaactttctcttataaata 56216368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 44200120 - 44199977
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||  |||||||||| ||||||||||     
T  44200120 actccctccggtcttatttacaagagacaatttactttttagatacactaaataatttatgtatttggtttagattcctgactagatatatacattattc 44200021  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||| ||||| ||||||||||||| ||||||| |||||||    
T  44200020 aatatatcaaaaaaatcaactttctcttgtaaatagaaccggag 44199977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 55292260 - 55292117
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||||||| | || ||||||||||| |||| ||| |||||||||||||||||||||||||||||||| |||||||| | ||||||||| ||||||||||     
T  55292260 actctctctgatcctatttacaagaaacaatttattttttagatacattaaataatttatgtatttgatttaggttctcgactagatatatacattattc 55292161  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||| |||||||| |||||||||||||||    
T  55292160 aatgtatctaaaaagtcaaatttctcttgtaaataggaccggag 55292117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 49122663 - 49122526
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| || ||||||||||||||||||| |||||    
T  49122663 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttaactagatacatacattattcaatgt 49122564  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
     || |||||||||||| |||||| ||||||| |||||||    
T  49122563 -tctaaaaagtcaactgtctcttgtaaatagaaccggag 49122526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 418 - 557
Target Start/End: Complemental strand, 3086020 - 3085882
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||     
T  3086020 actccctccggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttatgttattgactaaatacatacattattc 3085921  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    ||||| || ||||||| |  |||||||| |||||||||||    
T  3085920 aatgt-tctaaaaagttatttttctcttgtaaataggacc 3085882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 2411974 - 2411845
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||| |||||||  |||||    
T  2411974 tatttacaagaaacaatttactttttagatacattaaataatttatgtatttagtttagattcttgactagatacatacattattcaatgtatttaaaaa 2411875  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    || | |||||||||||||| || |||||||    
T  2411874 gtgatctttctcttataaacagaaccggag 2411845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 424 - 561
Target Start/End: Complemental strand, 52536093 - 52535956
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| ||||||||||| |||| | |||||||| ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||||    
T  52536093 tccggtcctatttacaagatacaattaactttttatatacattaaataatttatgtatttgatttaggtttttaactagatacatacattattcaatgta 52535994  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || ||||||| |||||| ||||||||||| || |||||    
T  52535993 tctaaaaagttaactttttcttataaataagatcggag 52535956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 457 - 561
Target Start/End: Original strand, 20688455 - 20688559
Alignment:
Q  457 tagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggac 556  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||| |||||| ||||||||||    
T  20688455 tagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaagtcaactgtctcttgtaaataggac 20688554  T
Q  557 cggag 561  Q
    |||||    
T  20688555 cggag 20688559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 418 - 516
Target Start/End: Complemental strand, 7350354 - 7350256
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7350354 actctttctggtcatatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattatt 7350256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 418 - 559
Target Start/End: Original strand, 39834274 - 39834415
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||||||| |||| |||||||||||||||||     
T  39834274 actccctccggtcttatttacaagagacaatttattttttagatacattaaataatttatatattttgtttaggttcttgattagatacatacattattc 39834373  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgg 559  Q
    |||||||  ||||| |||| ||  || | |||||||||||||    
T  39834374 aatgtatttaaaaaatcaatttgttcatgtaaataggaccgg 39834415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 424 - 561
Target Start/End: Original strand, 53303742 - 53303879
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||||||| ||||| ||| |||||||||||| ||||||||||||||||||||||||| || ||||||| |||||||||||||| ||||||    
T  53303742 tccggtcctatttacaagtgacaatttattttttagatacactaaataatttatgtatttggtttagattcttgactaaatacatacattattcaatgta 53303841  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || |||||  | | |||||||| ||||||| |||||||    
T  53303842 tctaaaaaaaccattttctcttgtaaatagcaccggag 53303879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 439 - 561
Target Start/End: Complemental strand, 32517899 - 32517775
Alignment:
Q  439 aagagacaagttactttttag-atacattaaataattt-atgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaa 536  Q
    ||||||||| ||| ||||||| ||| |||||||||||| ||||||||| ||||| || ||||||||||||||| |||||| |||||||| ||||||||||    
T  32517899 aagagacaatttattttttagtatatattaaataattttatgtatttgatttagattcttgactagatacatatattattcaatgtatctaaaaagtcaa 32517800  T
Q  537 ctttctcttataaataggaccggag 561  Q
    |||||||||||||||||||||||||    
T  32517799 ctttctcttataaataggaccggag 32517775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 432 - 552
Target Start/End: Original strand, 38046624 - 38046744
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||||| || ||| |||| ||||| || |||||||||||||||||||||||| || ||||||| |||||||||||||| |||||||| |||||    
T  38046624 tatttacaagagataatttatttttcagatatataaaataatttatgtatttggtttagatttttgactaaatacatacattattcaatgtatctaaaaa 38046723  T
Q  532 gtcaactttctcttataaata 552  Q
     |||||||| |||||||||||    
T  38046724 atcaactttatcttataaata 38046744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 15171017 - 15170888
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||| | |||| |||||||||||||||||| ||||||||||||||||| |||| ||| |||| ||| |||||| |||||| |||||||  |||||    
T  15171017 tatttacaaaaaacaatttactttttagatacattgaataatttatgtatttgatttatgttcttgattagttacatatattattcaatgtatttaaaaa 15170918  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    ||||| |||||||| |||||| ||||||||    
T  15170917 gtcaattttctcttgtaaataagaccggag 15170888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 424 - 525
Target Start/End: Original strand, 51833018 - 51833119
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||| || ||| |||||||||| | ||||    
T  51833018 tccggtcctatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgaataaatatatacattattcattgta 51833117  T
Q  524 tc 525  Q
    ||    
T  51833118 tc 51833119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 418 - 558
Target Start/End: Original strand, 21229225 - 21229365
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||| ||| ||||||||||| |||| |||   |||| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||     
T  21229225 actccctccagtcttatttacaagaaacaatttatcatttaaatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattc 21229324  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||||||| ||||| | | |||| ||||||| | |||||||    
T  21229325 aatgtatctaaaaaatgatctttatcttatagacaggaccg 21229365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 465 - 561
Target Start/End: Complemental strand, 29833366 - 29833270
Alignment:
Q  465 ttaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||||||||||||||| |||||||| ||||||| ||||||| ||| || |||||||| |||||||||| ||| |||| |||||||||||||||    
T  29833366 ttaaataatttatgtatttgatttaggttcttgactaaatacatatattcttcaatgtatctaaaaagtcaattttatcttgtaaataggaccggag 29833270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 418 - 499
Target Start/End: Original strand, 27006505 - 27006586
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgac 499  Q
    |||| |||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || |||||    
T  27006505 actccctccagtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttagattcttgac 27006586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 54611979 - 54612107
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||  |||||| |||| |||| |||||||||||||||||||||||||||||||||||||||           ||| |||||||||||||| |||||    
T  54611979 ctccggttctatttataagacacaatttactttttagatacattaaataatttatgtatttggtt----------gctaaatacatacattattcaatgt 54612068  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||  |||| ||||||||||||||||||||| || |||||    
T  54612069 atttaaaaggtcaactttctcttataaataagatcggag 54612107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 6246756 - 6246613
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||||||||  ||    |  || | ||||||| ||||||    
T  6246756 actccctccggtcctatttacaagaga-aagttgactttttagatacattcaataatatatgtatttggtcaagaacctaaaccaaatacataaattatt 6246658  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| ||||||| || | |||||| ||||||| |||||||    
T  6246657 taatgtatctaaaaagtaaattgtctcttgtaaatagaaccggag 6246613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 4758777 - 4758920
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||| ||    |  |  | ||||||| |||||||    
T  4758777 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagttaagaacctaaatcaaatacataaattattt 4758876  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  4758877 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 4758920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 434 - 536
Target Start/End: Original strand, 4698639 - 4698741
Alignment:
Q  434 tttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagt 533  Q
    ||||||||| |||| | | |||||||||||||| |||||||||||||| |||||||| || | ||| | ||||||| |||||| |||||||| ||||| |    
T  4698639 tttacaagaaacaattgaatttttagatacattgaataatttatgtatctggtttagattctagaccatatacataaattattcaatgtatctaaaaaat 4698738  T
Q  534 caa 536  Q
    |||    
T  4698739 caa 4698741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 561
Target Start/End: Complemental strand, 36099640 - 36099492
Alignment:
Q  413 agaaaactctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacat 512  Q
    |||| |||| |||||||| |||||||||||||||  | | |||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||    
T  36099640 agaatactccctccggtcctatttacaagagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaat 36099541  T
Q  513 tatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  36099540 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 36099492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 20459241 - 20459383
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    ||||| ||||||| ||| || |||| |||| ||||||||| ||| |||| |||| || ||||||||||| ||  || | | |||| |||||  ||||||     
T  20459241 actctatccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattg 20459339  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| ||||||| |||||| ||||||||||||||||||||    
T  20459340 aatgaatctaaaaagttaactttttcttataaataggaccggag 20459383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 47866183 - 47866041
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||| || |||| |||| ||||||||| ||| |||| |||| || ||||||||||| ||  || | | |||| |||||  ||||||     
T  47866183 actccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggctaggtacatcaattattg 47866085  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| ||||||| |||||| ||||||||||||||||||||    
T  47866084 aatgaatctaaaaagttaactttttcttataaataggaccggag 47866041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 557
Target Start/End: Original strand, 2385195 - 2385334
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||  ||  | |  || | ||||||| ||||||    
T  2385195 actccctccggtcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaacaaaatacataaattatt 2385293  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    ||||||||| ||||| | || | |||||| |||||||||||    
T  2385294 taatgtatctaaaaattaaattgtctcttgtaaataggacc 2385334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 426 - 560
Target Start/End: Complemental strand, 31227411 - 31227277
Alignment:
Q  426 cggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtat 524  Q
    ||||| ||||||||||||| ||||| ||||||||||||||||||||||| ||||||| | ||  ||    |  || | ||||||| ||||||||||||||    
T  31227411 cggtcctatttacaagaga-aagttgactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtat 31227313  T
Q  525 ccaaaaagtcaactttctcttataaataggaccgga 560  Q
    | ||||||| || | | |||| ||||||||||||||    
T  31227312 ctaaaaagtaaattgtttcttgtaaataggaccgga 31227277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 42804403 - 42804261
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||| || |||| |||| ||| ||||| ||| ||||||||| || ||||||||||| ||  || |  | ||| |||||  ||||||     
T  42804403 actccctccggtcctatatataagaaacaatttatttttttgattcattaaatagttgatgtatttggtctat-ttctaaattaggtacatcaattattg 42804305  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| ||||||| |||||| ||||||||||||||||||||    
T  42804304 aatgaatctaaaaagttaactttttcttataaataggaccggag 42804261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 53621328 - 53621471
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| |  |  ||    |  || | ||||||| ||||||     
T  53621328 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctaatgaagaacctaaaccaaatacataaattattc 53621427  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  53621428 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 53621471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 481
Target Start/End: Complemental strand, 20688559 - 20688501
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||||||| |||||||||||||||  | |||||||||||||||| |||||| |||||||    
T  20688559 ctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtat 20688501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 23125709 - 23125651
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  23125709 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 23125651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 43020898 - 43020761
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||| || |||| |||| ||||||||| ||| |||| |||| || ||||||||||| ||  || | |  ||| |||||  |||||| ||||     
T  43020898 ctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctaggttaggtacatcaattattgaatga 43020800  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||||| |||||| ||||||||||||||||||||    
T  43020799 atctaaaaagttaactttttcttataaataggaccggag 43020761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 536
Target Start/End: Complemental strand, 4698757 - 4698653
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||| | |||| | | |||||||||||||| |||||||||||||| |||| |||  | |  || ||||||||| |||||| |||||||| |||||    
T  4698757 tatttacaataaacaattgattttttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaatgtatctaaaaa 4698658  T
Q  532 gtcaa 536  Q
     ||||    
T  4698657 ttcaa 4698653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 517 - 561
Target Start/End: Complemental strand, 9894674 - 9894630
Alignment:
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||| ||| |||||||||||||| ||||||||||||||||||||    
T  9894674 taatgaatctaaaaagtcaactttttcttataaataggaccggag 9894630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 38687911 - 38688054
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| || |||| | ||  ||    |  || | ||||||| ||||||    
T  38687911 actccctccggtcttatttacaagaga-aagttgactttttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 38688009  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| ||||||| || | | |||| |||||||||||||||    
T  38688010 taatgtatctaaaaagtaaattgtttcttgtaaataggaccggag 38688054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 524
Target Start/End: Complemental strand, 43413675 - 43413584
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtat 524  Q
    ||||||||||| |||| | | |||||||||| |||  ||| ||||||||| |||||||| ||  |||||| |||||||||||||| |||||||    
T  43413675 tatttacaagaaacaattgattttttagatatattggata-tttatgtatctggtttagattcatgactacatacatacattattcaatgtat 43413584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 557
Target Start/End: Complemental strand, 7350235 - 7350196
Alignment:
Q  518 aatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  7350235 aatgtatctaaaatgtcaactttctcttataaataggacc 7350196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 503 - 558
Target Start/End: Original strand, 18430340 - 18430395
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| ||||||||||||    
T  18430340 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccg 18430395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 19485720 - 19485657
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||||||| || | | |||||||||||||| |||||| |||||||    
T  19485720 actccctccggtcctatttacaagagaaaattgattttttagatacattgaataatgtatgtat 19485657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 490
Target Start/End: Original strand, 20114096 - 20114131
Alignment:
Q  455 tttagatacattaaataatttatgtatttggtttag 490  Q
    |||||||||||| |||||||||||||||||||||||    
T  20114096 tttagatacattgaataatttatgtatttggtttag 20114131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 580496 - 580554
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||| | || | |||||| |||||||||||||||    
T  580496 atacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggag 580554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 557
Target Start/End: Complemental strand, 2279587 - 2279533
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||    
T  2279587 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggacc 2279533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 3085957 - 3086015
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||| | || | |||||| |||||||||||||||    
T  3085957 atacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccggag 3086015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 480
Target Start/End: Original strand, 15170883 - 15170945
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgta 480  Q
    |||| |||||||| ||||||||||||| || | |||||||| ||||||| |||||| ||||||    
T  15170883 actccctccggtcttatttacaagagaaaattgactttttaaatacattgaataatatatgta 15170945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 18135398 - 18135456
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| |||||| |||||||| ||||||| || | |||||| |||||||||||||||    
T  18135398 atacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 18135456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 27006568 - 27006510
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||| ||||    
T  27006568 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggactggag 27006510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 420 - 481
Target Start/End: Original strand, 32517772 - 32517833
Alignment:
Q  420 tctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    ||||||||||| |||||| |||||| ||||| |||||||||||||||| |||||| |||||||    
T  32517772 tctctccggtcctatttataagaga-aagttgactttttagatacattgaataatatatgtat 32517833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 561
Target Start/End: Original strand, 53225737 - 53225787
Alignment:
Q  511 attatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||| |||| ||| |||||||||| ||| ||||||||||||||||||||    
T  53225737 attattcaatgaatctaaaaagtcaattttttcttataaataggaccggag 53225787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 54612037 - 54611979
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | | |||||||||||| |||||||    
T  54612037 atacataaattatttaatgtatctaaaaagtaaattgtgtcttataaatagaaccggag 54611979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 5970364 - 5970421
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| |||||||||||| || ||||||| || | |||||| ||||||||||||||    
T  5970364 atacataaattatttaatgtgtctaaaaagtaaattgtctcttgtaaataggaccgga 5970421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 31854464 - 31854521
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| ||||||||||||||| ||||||| || | | |||| ||||||||||||||    
T  31854464 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccgga 31854521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Complemental strand, 51833075 - 51833018
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| ||||||||||||||| ||||| | || | |||||| ||||||||||||||    
T  51833075 atacataaattatttaatgtatctaaaaaataaattgtctcttgtaaataggaccgga 51833018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 558
Target Start/End: Complemental strand, 3043939 - 3043800
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||  ||| || |||| |||| ||| ||||| ||| |||| |||| || ||||||||||| ||  || | |||||| |||||  ||||||     
T  3043939 actccctccggttctatatataagaaacaatttatttttttgattcattgaatagttgatgtatttggtctatttt-tagactaggtacatcaattattg 3043841  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||| ||| ||||| | |||||| |||||||||||||||||    
T  3043840 aatgaatctaaaaaattaactttttcttataaataggaccg 3043800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 483
Target Start/End: Original strand, 29833270 - 29833330
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtattt 483  Q
    |||||||| ||||||||||| | || | |||||||||||||||| || ||| |||||||||    
T  29833270 ctccggtcctatttacaagataaaattgactttttagatacattgaagaatatatgtattt 29833330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 429 - 481
Target Start/End: Original strand, 39732012 - 39732064
Alignment:
Q  429 tcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| ||||||||| |||| | |||||||||| ||||| ||||||||||||||    
T  39732012 tcatgtttacaagaaacaattgactttttagacacattgaataatttatgtat 39732064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 501 - 561
Target Start/End: Original strand, 44111828 - 44111888
Alignment:
Q  501 agatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||  |||| | |||| ||| |||||||||||||| ||||||||||| ||||||||    
T  44111828 agatacatcaattactcaatgaatctaaaaagtcaactttttcttataaataagaccggag 44111888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 486
Target Start/End: Complemental strand, 53225792 - 53225724
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggt 486  Q
    |||| |||||||| |||||| |||| | || | ||||||||||| |||| ||||||| |||||||||||    
T  53225792 actccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggt 53225724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 451 - 483
Target Start/End: Complemental strand, 55466147 - 55466115
Alignment:
Q  451 actttttagatacattaaataatttatgtattt 483  Q
    |||||||||||| ||||||||||||||||||||    
T  55466147 actttttagatatattaaataatttatgtattt 55466115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 6e-54; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 390953 - 390810
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||     
T  390953 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattc 390854  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| |||||||| |||||||||| |||||||||    
T  390853 aatgtatctaaaaaatcaactttatcttataaattggaccggag 390810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 24949779 - 24949636
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||     
T  24949779 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcttgactagatacatacattattc 24949680  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||| |||||||| |||||||||||||||    
T  24949679 aatgtatctaaaaagtcaattttctcttgtaaataggaccggag 24949636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 31971173 - 31971035
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  31971173 ctccggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 31971074  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||||||||||||||||| |||||| ||||||||    
T  31971073 atctaaaaagtcaactttctcttgtaaataagaccggag 31971035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 6047944 - 6047801
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||     
T  6047944 actccctccggtcatatttacaagagataatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacatacattattc 6047845  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| |||||||| || |||||||||||||||    
T  6047844 aatgtatctaaaaagttaactttctgttgtaaataggaccggag 6047801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 7405452 - 7405587
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  7405452 cggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatc 7405551  T
Q  526 caaaaagtcaactttctcttataaataggaccggag 561  Q
     |||||||||| |||||||| |||||| ||||||||    
T  7405552 taaaaagtcaattttctcttgtaaataagaccggag 7405587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 885745 - 885607
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    ||||| || ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  885745 ctccgatcctatttacaagagagaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 885646  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  885645 atctaaaaagtcaactgtctcttgtaaataggaccggag 885607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 412 - 561
Target Start/End: Complemental strand, 6045835 - 6045686
Alignment:
Q  412 cagaaaactctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacataca 511  Q
    ||||| |||| |||||||| |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| || ||||||||||||||| |    
T  6045835 cagaatactccctccggtcctatttacaagagacaatttactttttagatagattaaataatttatgtatttgatttagattcttgactagatacataga 6045736  T
Q  512 ttatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||| |||||||| |||| ||||||||||||||||||||||||||||||    
T  6045735 ttattcaatgtatctaaaaggtcaactttctcttataaataggaccggag 6045686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 766575 - 766432
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  766575 actccctccggtcctatttacaagagataatttattttttagatacattaaataatttatgtatttggtttaggttattgactaaatacatacattattc 766476  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| || |||||||||||||||||||| |||||    
T  766475 aatgtatctaaaaaatcgactttctcttataaataggatcggag 766432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 17225391 - 17225248
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||| || |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||     
T  17225391 actccctccgatcctatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacattattc 17225292  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||| ||| |||||| ||||||||    
T  17225291 aatgtatctaaaaagtcaactttcacttgtaaataagaccggag 17225248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 418 - 553
Target Start/End: Original strand, 30686544 - 30686679
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    ||||||||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||     
T  30686544 actctctccagtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttcgtttaggtttttgactagatacatacattattc 30686643  T
Q  518 aatgtatccaaaaagtcaactttctcttataaatag 553  Q
    |||||||  |||||||||| |||||||| |||||||    
T  30686644 aatgtatttaaaaagtcaattttctcttgtaaatag 30686679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 33859498 - 33859633
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||  |||||||    
T  33859498 cggtcctatttacaatagacaatttactttttagatacattaaataatttatgtatttggtttagtttcttgactagatacatacattattcgatgtatc 33859597  T
Q  526 caaaaagtcaactttctcttataaataggaccggag 561  Q
     ||||||| ||||||||||| |||||||||||||||    
T  33859598 taaaaagttaactttctcttgtaaataggaccggag 33859633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 8559061 - 8558919
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||| || |||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||     
T  8559061 actccctccgatcttatttacaagagacaatttattttttagatacat-aaataatttatgtatttggtttaggttcttaactagatacatacattattc 8558963  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||| |||||||| |||||||||| ||||    
T  8558962 aatgtatctaaaaagtcaattttctcttgtaaataggactggag 8558919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 426 - 561
Target Start/End: Complemental strand, 34639180 - 34639045
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| |||||| ||||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||  |||||||    
T  34639180 cggtcctatttataagagacaatttactttttagatacattgaaaaatttatgtatttggtttaggttcttgactagatacatacattattgcatgtatc 34639081  T
Q  526 caaaaagtcaactttctcttataaataggaccggag 561  Q
     |||||||||||| |||||| |||||||||| ||||    
T  34639080 taaaaagtcaactgtctcttgtaaataggactggag 34639045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 432 - 533
Target Start/End: Complemental strand, 6801685 - 6801584
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  6801685 tatttacaagaaacaatttactttttagatacattaaataattcatgtatttggtttaggttcttgactagatacatacattattcaatgtatctaaaaa 6801586  T
Q  532 gt 533  Q
    ||    
T  6801585 gt 6801584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 424 - 561
Target Start/End: Original strand, 14931264 - 14931396
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||     ||||||||||||||| ||||||    
T  14931264 tccggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttttt-----gatacatacattattcaatgta 14931358  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || |||||||||| | |||||| |||||| ||||||||    
T  14931359 tctaaaaagtcaattgtctcttgtaaatatgaccggag 14931396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 432 - 555
Target Start/End: Complemental strand, 13144343 - 13144220
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||| |||||||| |||||    
T  13144343 tatttacaagagatagattactttttagatacattaaataatttatgtattttgtttaggttcttgacttgatacatacataattgaatgtatctaaaaa 13144244  T
Q  532 gtcaactttctcttataaatagga 555  Q
    ||||||||| | || |||||||||    
T  13144243 gtcaactttattttgtaaatagga 13144220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 22898858 - 22898948
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacatt 513  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||| ||||||| |||||||||||    
T  22898858 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttggtttaggttcttgactatatacatacatt 22898948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 423 - 512
Target Start/End: Original strand, 22880923 - 22881012
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacat 512  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||| ||||||| ||||||||||    
T  22880923 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatatatttagtttaggttcttgactatatacatacat 22881012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 453 - 533
Target Start/End: Complemental strand, 36429 - 36349
Alignment:
Q  453 tttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagt 533  Q
    |||||||||| ||||||||||||||||||||||||||| || ||||||||||| ||| |||||| ||| |||| |||||||    
T  36429 tttttagatatattaaataatttatgtatttggtttagatttttgactagatatataaattattcaatatatctaaaaagt 36349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 24949631 - 24949774
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || | |||||||||||||||| |||||| ||||||| | ||  ||   ||  || | ||||||| |||||||    
T  24949631 actccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattattt 24949730  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  24949731 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 24949774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 14931401 - 14931338
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| ||||||||||||||||||||||||| | |||||||||||||||| |||||| |||||||    
T  14931401 actccctccggtcatatttacaagagacaattgactttttagatacattgaataatgtatgtat 14931338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 418 - 558
Target Start/End: Complemental strand, 7405592 - 7405452
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||    
T  7405592 actccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 7405493  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||||||| ||||||| || | |||||| ||||||||||||    
T  7405492 aatgtatctaaaaagtaaattgtctcttgtaaataggaccg 7405452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 432 - 560
Target Start/End: Complemental strand, 28630887 - 28630759
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||| |||| |||| | ||||||||||| ||||  |||| ||||||||||||| ||  |||| ||| ||||||||  |||| | |||| ||  |||||    
T  28630887 tatttataagaaacaattgactttttagattcattgcataaattatgtatttggtctatattatagacaagatacatcaattactcaatgaataaaaaaa 28630788  T
Q  532 gtcaactttctcttataaataggaccgga 560  Q
    ||||| ||| |||||||||||||||||||    
T  28630787 gtcaaatttttcttataaataggaccgga 28630759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 885602 - 885745
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||    
T  885602 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 885701  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| ||||||||| |||||    
T  885702 aatgtatctaaaaagtaaattctctcttgtaaataggatcggag 885745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 503 - 560
Target Start/End: Complemental strand, 14931321 - 14931264
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| ||||||||||||||| ||||||| || | |||||||||||||||||||||    
T  14931321 atacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccgga 14931264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 31971030 - 31971173
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||||||    
T  31971030 actccctccggtcttatttacaagaga-aagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 31971128  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| |||| || || | |||||| |||||||||||||||    
T  31971129 taatgtatctaaaatgtaaattgtctcttgtaaataggaccggag 31971173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 390890 - 390948
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  390890 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 390948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 6045681 - 6045824
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    ||||||||||||| |||||| |||||| ||||| || ||||||||||||| |||||| ||||||| | ||  ||  | |  |  | ||||||| ||||||    
T  6045681 actctctccggtcctatttataagaga-aagttgaccttttagatacattgaataatctatgtatctagtcaagaatctaaatcaaatacataaattatt 6045779  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| |||| ||||||| || | |||||| |||||||||||||||    
T  6045780 taatctatctaaaaagtaaattgtctcttgtaaataggaccggag 6045824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 8558914 - 8558977
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| |||| ||| ||||||||||||| || | |||||||||||||||| |||||| |||||||    
T  8558914 actccctccagtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 8558977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 766512 - 766570
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||| | || | |||||| |||||||||||||||    
T  766512 atacataaattatttaatgtatctaaaaaataaattatctcttgtaaataggaccggag 766570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 556
Target Start/End: Original strand, 1158245 - 1158383
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||||||| |||  ||||||||| |||||  | ||||||||||| |||| ||||||| ||||||| ||| ||  || | ||| | ||||||  ||||||     
T  1158245 actctctctggttctatttacaaaagacatttaactttttagattcattgaataattaatgtattcggtctatattctagaccaaatacatcaattattc 1158344  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggac 556  Q
    |||||||  |||||||||| | | |||| ||||||||||    
T  1158345 aatgtatttaaaaagtcaattatttcttgtaaataggac 1158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 6047881 - 6047939
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||| ||||||||    
T  6047881 atacataaattatttaatgtatctaaaaagtaaattatctcttgtaaatatgaccggag 6047939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 30686607 - 30686549
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||| ||||    
T  30686607 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggactggag 30686549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 558
Target Start/End: Complemental strand, 33859638 - 33859498
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtta-ctttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| |||||| ||||||||||||||  |||||| ||||||| | ||  ||    |  || | ||||||| ||||||    
T  33859638 actccctccggtcctatttacaagaga-aagttaactttttagatacatcgaataatgtatgtatctagtcaagaaactaaaccaaatacataaattatt 33859540  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    ||||||||| ||||||| || | ||| || ||||||||||||    
T  33859539 taatgtatctaaaaagtaaattgtctattgtaaataggaccg 33859498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 486
Target Start/End: Complemental strand, 2943390 - 2943322
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggt 486  Q
    |||| |||||||| ||| || |||| |||| ||||||||| ||| ||||||||| || |||||||||||    
T  2943390 actccctccggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggt 2943322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 6047796 - 6047859
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtta-ctttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||| ||| |||||| ||||||||||||||| |||||| |||||||    
T  6047796 actccctccggtcctatttacaacaga-aagttaactttttagatacattgaataatgtatgtat 6047859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 17225243 - 17225306
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| |||||||||| || ||||| |||||||||||||||| |||||| |||||||    
T  17225243 actccctccggtcttatttacaagtga-aagttgactttttagatacattgaataatgtatgtat 17225306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 6e-54; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 14768098 - 14768241
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  14768098 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattc 14768197  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| ||||||||||||| |||||||||||||||    
T  14768198 aatgtatctaaaaaatcaactttctcttgtaaataggaccggag 14768241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 6087044 - 6086906
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  6087044 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 6086945  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  6086944 atctaaaaagtcaactgtctcttgtaaataggaccggag 6086906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 25113492 - 25113354
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||| |||||    
T  25113492 ctccggtcctatttacaagagacaatttactttttcgatacattaaataatttatgtatttggtttaggttcttgattaaatacatacattattcaatgt 25113393  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  25113392 atctaaaaagtcaactttctcttataaataggaccggag 25113354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 26999026 - 26999164
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  26999026 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 26999125  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||| | |||||| |||||||||||||||    
T  26999126 atctaaaaagtcaaatgtctcttgtaaataggaccggag 26999164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 418 - 560
Target Start/End: Original strand, 47449916 - 47450058
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  47449916 actccctccgatcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattt 47450015  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    |||||||| ||||| |||||||||| || ||||||||||||||    
T  47450016 aatgtatctaaaaactcaactttctattgtaaataggaccgga 47450058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 420 - 555
Target Start/End: Complemental strand, 335521 - 335386
Alignment:
Q  420 tctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaa 519  Q
    ||||||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  335521 tctctccggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaa 335422  T
Q  520 tgtatccaaaaagtcaactttctcttataaatagga 555  Q
    |||||| ||||||||||||||||||| |||||||||    
T  335421 tgtatctaaaaagtcaactttctcttgtaaatagga 335386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 9465219 - 9465076
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||     
T  9465219 actccctccggtcctatttacaagagacaatttactttttagatacataaaataatttatgtatttgatttaggttcttgactagatacatacattattc 9465120  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||||||| |||| |||||||||||||||    
T  9465119 aatgtatctaaaaagtcaactttatcttgtaaataggaccggag 9465076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 19202398 - 19202255
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||     
T  19202398 actccctccggtcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacataccttattc 19202299  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  19202298 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 19202255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 40215048 - 40214905
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||      
T  40215048 actccctccggtcctatttataagagacaagttactttttagatacattaaataatttatgtatttgatttagattcttgactagatacatacattatcc 40214949  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  40214948 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 40214905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 9440271 - 9440133
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||| |||||    
T  9440271 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgt 9440172  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  9440171 atctaaaaagtcaactgtctcttgtaaataggaccggag 9440133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 10049673 - 10049811
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  10049673 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 10049772  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||| | |||||| |||||||||||||||    
T  10049773 atctaaaaagtcaattgtctcttgtaaataggaccggag 10049811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 424 - 561
Target Start/End: Complemental strand, 25846653 - 25846516
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||    
T  25846653 tccggtcctatttacaagagacaatttactttttaaatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgta 25846554  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || ||||| |||||| ||| ||||||||||||||||||    
T  25846553 tctaaaaaatcaactgtcttttataaataggaccggag 25846516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 28945656 - 28945799
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||||||||||     
T  28945656 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttaactagaaacatacattattg 28945755  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||| |||||||||| |||||||| |||||||||||||||    
T  28945756 aatatatctaaaaagtcaattttctcttgtaaataggaccggag 28945799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 418 - 556
Target Start/End: Original strand, 29019735 - 29019873
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||     
T  29019735 actccctccggtcctatttacaagagacaatttacattttagatacattaaataatttatgtatttggtttaggttcttgactagatacatatattattc 29019834  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggac 556  Q
    |||||||| |||||||||| |||||||| ||||||||||    
T  29019835 aatgtatctaaaaagtcaattttctcttgtaaataggac 29019873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 423 - 557
Target Start/End: Original strand, 49122949 - 49123083
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||    
T  49122949 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggctcttgactagatacatacattattcaatgt 49123048  T
Q  523 atccaaaaagtcaactttctcttataaataggacc 557  Q
    ||| |||||||||| ||| || |||||||||||||    
T  49123049 atctaaaaagtcaaatttatcctataaataggacc 49123083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 51698248 - 51698119
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||  | ||||||||||||||||||| |||||||| |||||    
T  51698248 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttatgttcattactagatacatacattattgaatgtatctaaaaa 51698149  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    |||||||||||||| |||||||||||||||    
T  51698148 gtcaactttctcttgtaaataggaccggag 51698119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 429 - 555
Target Start/End: Original strand, 9190039 - 9190165
Alignment:
Q  429 tcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaa 528  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||||||||||| |||||||| ||    
T  9190039 tcatatttacaagagacgatttacttttaagatacattaaataatttatgtatttggtttaaattcttgactagatacatacattattcaatgtatctaa 9190138  T
Q  529 aaagtcaactttctcttataaatagga 555  Q
    |||||||||||||||||||||||||||    
T  9190139 aaagtcaactttctcttataaatagga 9190165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 435 - 561
Target Start/End: Original strand, 40464539 - 40464665
Alignment:
Q  435 ttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtc 534  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||  ||||| ||    
T  40464539 ttacaagagacaatttactttttagataaattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgtatttaaaaaatc 40464638  T
Q  535 aactttctcttataaataggaccggag 561  Q
    |||||| ||||||||||||||||||||    
T  40464639 aactttatcttataaataggaccggag 40464665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 423 - 560
Target Start/End: Complemental strand, 8243825 - 8243688
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||| |||||    
T  8243825 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttagattcttgactagatacatacattattcaatgt 8243726  T
Q  523 atccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||| |||||||||| | |||||| |||||| |||||||    
T  8243725 atctaaaaagtcaattgtctcttgtaaataagaccgga 8243688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 424 - 561
Target Start/End: Complemental strand, 18765400 - 18765263
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| ||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||||||    
T  18765400 tccggtcctatttacaagaaacaatttactttttagatgcattaaataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgta 18765301  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || ||||| ||||||||||||| |||||| ||||||||    
T  18765300 tctaaaaaatcaactttctcttgtaaatatgaccggag 18765263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 21653478 - 21653349
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||| |||||||| |||||    
T  21653478 tatttacaagagacaatttactttttagatacattaaataatttatgcatttggtttaggttcttgactagatatatacattattcaatgtatctaaaaa 21653379  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
     |||| |||||||| |||||||||||||||    
T  21653378 atcaaatttctcttgtaaataggaccggag 21653349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 418 - 560
Target Start/End: Original strand, 379070 - 379215
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggtta---ttgactagatacatacatta 514  Q
    |||| |||||||| |||||||||||||||| | | |||||||||||||||||||||||||||||||||||||| ||    ||||||||||||||| ||||    
T  379070 actccctccggtcctatttacaagagacaattaattttttagatacattaaataatttatgtatttggtttagattgatcttgactagatacataaatta 379169  T
Q  515 tttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    || |||||||| ||||||||||||||||||||||||||||||||||    
T  379170 ttcaatgtatctaaaaagtcaactttctcttataaataggaccgga 379215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 426 - 561
Target Start/End: Complemental strand, 28565075 - 28564940
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| |||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||||     
T  28565075 cggtcctatttacaagagacaatttattttttagatgcattaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtata 28564976  T
Q  526 caaaaagtcaactttctcttataaataggaccggag 561  Q
     |||||||||| |||||||| |||||||||||||||    
T  28564975 taaaaagtcaattttctcttgtaaataggaccggag 28564940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 432 - 561
Target Start/End: Original strand, 23825163 - 23825292
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||| |||||||| |||||    
T  23825163 tatttacaagaaacaatttactttttagatacatcaaataatttatgtatttggtttagattcttgactagatacatacattattcaatgtatctaaaaa 23825262  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    |||||||||||||| |||||| || |||||    
T  23825263 gtcaactttctcttgtaaatatgatcggag 23825292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 432 - 545
Target Start/End: Complemental strand, 52114158 - 52114045
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||| |||||    
T  52114158 tatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttctttactagatacatacattattcaatgtatctaaaaa 52114059  T
Q  532 gtcaactttctctt 545  Q
     |||||||||||||    
T  52114058 atcaactttctctt 52114045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 42605975 - 42605832
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| || ||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||||||||||     
T  42605975 actccctccggtcctacttacaagagacaatttactttttagatacataaaataatttatgtatttagtttaagttcttgactagatacatacattattc 42605876  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| |||||||| |||| |||||||||| ||||    
T  42605875 aatgtatctaaaaaatcaactttatcttgtaaataggactggag 42605832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 42225710 - 42225567
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||| | |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  42225710 actccctccggtcttatttacaaaaaacaatttacttttttgatacattaaataatttatgtatttagtttaggttattgactagatacatacattattc 42225611  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| | || ||| |||| ||||| |||||||||    
T  42225610 aatgtatctaaaaaattaattttttcttgtaaatgggaccggag 42225567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 449 - 558
Target Start/End: Original strand, 1122306 - 1122415
Alignment:
Q  449 ttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttata 548  Q
    |||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||| || |||||||| |||||||||| |||||||| ||    
T  1122306 ttactttttagatacattaaataatttatgtatttattttaggttcttgactagatacatacattcttcaatgtatctaaaaagtcaattttctcttgta 1122405  T
Q  549 aataggaccg 558  Q
    ||||||||||    
T  1122406 aataggaccg 1122415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 424 - 561
Target Start/End: Original strand, 13826118 - 13826255
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| ||||||||||| || | ||||||||||  |||||||||||||||||| ||||| |||||||| ||||||| ||||||||||| || ||||||    
T  13826118 tccggtcctatttacaagaaacgatttactttttatttacattaaataatttatgaatttgatttaggttcttgactaaatacatacattcttcaatgta 13826217  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || ||||||||||||||||||| ||||||| |||||||    
T  13826218 tctaaaaagtcaactttctcttgtaaatagaaccggag 13826255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 22003811 - 22003939
Alignment:
Q  433 atttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaag 532  Q
    ||||||||||||||| | | |||||||||||||| |||||||||| ||||| |||||| || || |||||||||||| |||||| |||||||| ||||||    
T  22003811 atttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaatgtatctaaaaag 22003910  T
Q  533 tcaactttctcttataaataggaccggag 561  Q
    |||| ||||| ||||||||||||||||||    
T  22003911 tcaattttctgttataaataggaccggag 22003939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 433 - 561
Target Start/End: Original strand, 22011328 - 22011456
Alignment:
Q  433 atttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaag 532  Q
    ||||||||||||||| | | |||||||||||||| |||||||||| ||||| |||||| || || |||||||||||| |||||| |||||||| ||||||    
T  22011328 atttacaagagacaattaattttttagatacattgaataatttatatatttagtttagattctttactagatacataaattattcaatgtatctaaaaag 22011427  T
Q  533 tcaactttctcttataaataggaccggag 561  Q
    |||| ||||| ||||||||||||||||||    
T  22011428 tcaattttctgttataaataggaccggag 22011456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 39341509 - 39341377
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt---taatgtatccaa 528  Q
    ||||||||||| | | ||||| ||||||||| |||||||||||||| |||||| ||||| || ||||||||||||||||||||||   ||||||||| ||    
T  39341509 tatttacaagaaatacgttacattttagatatattaaataatttatatatttgatttagattcttgactagatacatacattatttaataatgtatctaa 39341410  T
Q  529 aaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||| |||||||||||||||    
T  39341409 aaagtcaattttctcttgtaaataggaccggag 39341377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 427 - 535
Target Start/End: Original strand, 8825740 - 8825848
Alignment:
Q  427 ggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatcc 526  Q
    |||| |||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||| |||||| |||| |||     
T  8825740 ggtcttatttacaagagacgaattactttttagatatattaaataatttatgtatttggtttaagttcttgactagatacatatattattcaatgcatct 8825839  T
Q  527 aaaaagtca 535  Q
    |||||||||    
T  8825840 aaaaagtca 8825848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 453 - 558
Target Start/End: Complemental strand, 44593314 - 44593209
Alignment:
Q  453 tttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaata 552  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| |||||| |||||||  |||||||||||||| |||| ||||||    
T  44593314 tttttagatacattaaataatttatgtatttggtttaagtttttgattagatacatatattattcaatgtatttaaaaagtcaactttttcttgtaaata 44593215  T
Q  553 ggaccg 558  Q
     |||||    
T  44593214 agaccg 44593209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 474 - 561
Target Start/End: Original strand, 26123046 - 26123133
Alignment:
Q  474 ttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||| |||||||||||||| |||||||||||||||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||    
T  26123046 ttatgcatttggtttaggtttttgactagatacatacattattcaatgtatctaaaaagtcatctttctcttgtaaataggaccggag 26123133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 432 - 510
Target Start/End: Complemental strand, 40142008 - 40141930
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatac 510  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||||    
T  40142008 tatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaaattcttgactaaatacatac 40141930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 434 - 512
Target Start/End: Complemental strand, 16660414 - 16660334
Alignment:
Q  434 tttacaagagacaagttactttttagatacattaaataa--tttatgtatttggtttaggttattgactagatacatacat 512  Q
    |||| ||||||| | ||||||||||||||||||||||||  ||||||||||||||||||||| ||||||| ||||||||||    
T  16660414 tttagaagagacgatttactttttagatacattaaataaaatttatgtatttggtttaggttgttgactaaatacatacat 16660334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 550
Target Start/End: Original strand, 3484332 - 3484460
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||| ||| |||||||||||||||| | | ||||||||||||||||||| |||||||||||||||||| || ||||     ||| || ||||||     
T  3484332 actccctccagtcctatttacaagagacaattaattttttagatacattaaatagtttatgtatttggtttagattcttga----gtacgtaaattattc 3484427  T
Q  518 aatgtatccaaaaagtcaactttctcttataaa 550  Q
    ||| |||| ||||| |||||||||| |||||||    
T  3484428 aatatatctaaaaaatcaactttcttttataaa 3484460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 424 - 561
Target Start/End: Original strand, 8243688 - 8243825
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| |||||||||||||||| | |||||||||||||||| |||||| ||||||| | ||  ||  | |  || | ||||||| |||||| ||||||    
T  8243688 tccggtcttatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattattcaatgta 8243787  T
Q  524 tccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || ||||||| || | |||||| |||||||||||||||    
T  8243788 tctaaaaagtaaattgtctcttgtaaataggaccggag 8243825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 10049816 - 10049673
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||||||     
T  10049816 actccctccggtcctatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattc 10049717  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  10049716 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 10049673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 26999169 - 26999026
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||    
T  26999169 actccctccggtcctatttacaagagacatttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 26999070  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  26999069 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 26999026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 418 - 535
Target Start/End: Complemental strand, 48593290 - 48593173
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||| ||||||| |||||| | ||||||||| |||| ||||||||||||||||||| ||  || | |||  |||||||  ||||||     
T  48593290 actccctccggtcctatatacaagaaacaagtaattttttagattcattgaataatttatgtatttggtctatattctagacccgatacatcaattattc 48593191  T
Q  518 aatgtatccaaaaagtca 535  Q
    |||||||| |||||||||    
T  48593190 aatgtatctaaaaagtca 48593173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 6086901 - 6087044
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||||||     
T  6086901 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattc 6087000  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  6087001 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 6087044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 28406467 - 28406610
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| | ||||||||||| | || ||||||| ||||||||||| ||  || | |||  | |||||| ||||||     
T  28406467 actccctccggtcctatttacaagaaacaattgactttttagattcgttgaataattaatgtatttggtctatattctagaccgggtacataaattattc 28406566  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| | | |||||||||| | | |||| |||||||||||||||    
T  28406567 aatgaacctaaaaagtcaattgtttcttgtaaataggaccggag 28406610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 28945804 - 28945661
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || | |||||||||||| ||| |||||| ||||| | | ||| ||    |  || | ||||||| |||||||    
T  28945804 actccctccggtcctatttacaagagaaaattgactttttagatatattcaataatgtatgtttctagttaagaacctaaaccaaatacataaattattt 28945705  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  28945704 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 28945661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 434 - 533
Target Start/End: Original strand, 55139189 - 55139288
Alignment:
Q  434 tttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagt 533  Q
    ||||| ||| |||| | |||||||||||||||| ||||||||||||||||| ||||  || ||||| | ||||||| |||||| ||| |||| |||||||    
T  55139189 tttaccagaaacaattgactttttagatacattgaataatttatgtatttgttttaaattcttgaccaaatacataaattattcaatatatctaaaaagt 55139288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 9440133 - 9440271
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||| |||||    
T  9440133 ctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaatgt 9440232  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||||| || | |||||| |||||||||||||||    
T  9440233 atctaaaaagtaaattgtctcttgtaaataggaccggag 9440271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 40214900 - 40215043
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| ||||||||||||||||  ||||| ||||||| | ||  ||  | |  |  | ||||||| ||||||    
T  40214900 actccctccggtcctatttacaagaga-aagttgactttttagatacattggataatgtatgtatctagtcaagaatctaaatcaaatacataaattatt 40214998  T
Q  517 taatgtatccaaaaagtcaactt-tctcttataaataggaccggag 561  Q
    ||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  40214999 taatgtatctaaaaagt-aacttgtctcttataaataggaccggag 40215043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 465 - 530
Target Start/End: Complemental strand, 42841700 - 42841635
Alignment:
Q  465 ttaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaa 530  Q
    ||||||||||||||||||| |||||| || || |||||||| |||||||||| |||||||| ||||    
T  42841700 ttaaataatttatgtatttagtttagattcttaactagatatatacattattcaatgtatctaaaa 42841635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 14768241 - 14768103
Alignment:
Q  423 ctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    |||||||| ||||||||||||| ||||| | |||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||||||    
T  14768241 ctccggtcctatttacaagaga-aagttgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatg 14768143  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||||||| || | |||||| |||||||||||||||    
T  14768142 tatctaaaaagtaaattgtctcttgtaaataggaccggag 14768103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 25113354 - 25113492
Alignment:
Q  423 ctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    |||||||| |||||| |||||| ||||| |||||||||||||||| |||||| |||||||||  |  ||    |  || | ||||||| |||||||||||    
T  25113354 ctccggtcctatttataagaga-aagttgactttttagatacattgaataatgtatgtatttaatcaagaacctaaaccaaatacataaattatttaatg 25113452  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||||||| || | |||||| |||||||||||||||    
T  25113453 tatcgaaaaagtaaattgtctcttgtaaataggaccggag 25113492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 28406615 - 28406472
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||| |||| | ||||||||| | |||| |||||||||||||   ||| |||  ||| ||| | ||||||  ||||||     
T  28406615 actccctccggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgtacccggtctagaatatagaccaaatacattaattattc 28406516  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    || | ||| |||||||||| | | |||| |||||||||||||||    
T  28406515 aacgaatctaaaaagtcaattgtttcttgtaaataggaccggag 28406472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 451 - 489
Target Start/End: Complemental strand, 8987844 - 8987806
Alignment:
Q  451 actttttagatacattaaataatttatgtatttggttta 489  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  8987844 actttttagatacattcaataatttatgtatttggttta 8987806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 560
Target Start/End: Original strand, 18765263 - 18765400
Alignment:
Q  423 ctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    |||||||||||||||||||||| ||||| | |||||||||||||| |||||| ||||||||| ||  ||    |  || | ||||||| |||||||||||    
T  18765263 ctccggtcatatttacaagaga-aagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatg 18765361  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccgga 560  Q
     ||| ||||||| || | | |||| ||||||||||||||    
T  18765362 catctaaaaagtaaattgtttcttgtaaataggaccgga 18765400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 558
Target Start/End: Original strand, 28564933 - 28565075
Alignment:
Q  416 aaactctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattat 515  Q
    |||||| |||||||| ||||||||||||| || | |||||||| ||||||| |||||| ||||||| | ||  ||  | |  || | ||||||| |||||    
T  28564933 aaactccctccggtcctatttacaagagaaaattgactttttatatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattat 28565032  T
Q  516 ttaatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||||| ||| ||||| | || | |||||| ||||||||||||    
T  28565033 ttaatgcatctaaaaaataaattgtctcttgtaaataggaccg 28565075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 473
Target Start/End: Complemental strand, 42841912 - 42841862
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataat 473  Q
    |||||| | |||||||||||||||| |||||||||| ||||||||||||||    
T  42841912 ctccggccctatttacaagagacaatttactttttaaatacattaaataat 42841862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 49123007 - 49122949
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  49123007 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 49122949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 555
Target Start/End: Original strand, 51698114 - 51698251
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||   |   ||  || | ||||||| ||||||    
T  51698114 actccctccggtcctatttacaagaga-aagttgactttttagatacattcaataatgtatgtatctagtaatgaacataaaccaaatacataaattatt 51698212  T
Q  517 taatgtatccaaaaagtcaactttctcttataaatagga 555  Q
    ||||||||| ||||||| || | |||||| |||||||||    
T  51698213 taatgtatctaaaaagtaaattgtctcttgtaaatagga 51698251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 29019869 - 29019740
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||||| || | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||||||||||||||| ||||     
T  29019869 tatttacaagagaaaattgactttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaat 29019770  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    || || | |||||| |||||||||||||||    
T  29019769 gtaaattgtctcttgtaaataggaccggag 29019740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 9465071 - 9465214
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    ||||||||||||| ||||||||||| | ||||| |||||||||||||||| |||||| ||||||| | ||  ||    |  |  | ||||||| ||||||    
T  9465071 actctctccggtcctatttacaagata-aagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatt 9465169  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    | ||||||| ||||||| || | |||||| |||||||||||||||    
T  9465170 ttatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 9465214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 435 - 483
Target Start/End: Original strand, 19880869 - 19880917
Alignment:
Q  435 ttacaagagacaagttactttttagatacattaaataatttatgtattt 483  Q
    |||||||| |||| | || ||||||||||||||||||||||||||||||    
T  19880869 ttacaagaaacaattgacgttttagatacattaaataatttatgtattt 19880917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 23825297 - 23825234
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||| ||||| |||||||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  23825297 actccctccgatcatatttacaagaga-aagttgactttttagatacattgaataatgtatgtat 23825234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 561
Target Start/End: Complemental strand, 379215 - 379075
Alignment:
Q  424 tccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattg---actagatacatacattatttaa 519  Q
    ||||||| |||||| |||||| ||||| |||||||||||||||| |||||||||||||| | ||  || | | |    || | ||||||| |||||||||    
T  379215 tccggtcctatttataagaga-aagttgactttttagatacattgaataatttatgtatctagtcaagatcaatctaaaccaaatacataaattatttaa 379117  T
Q  520 tgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||| ||||| | || | |||||| |||||||||||||||    
T  379116 tgtatctaaaaaattaattgtctcttgtaaataggaccggag 379075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 561
Target Start/End: Complemental strand, 21662934 - 21662891
Alignment:
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||    
T  21662934 aatgaatctaaaaagtcaactttttcttataaataggaccggag 21662891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 26123138 - 26123075
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||||||| |  | |||||||||||||||| |||||| |||||||    
T  26123138 actccctccggtcctatttacaagagaaagatgactttttagatacattgaataatgtatgtat 26123075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 53441907 - 53442050
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||| |||| |||  ||||||||| ||| ||||  |||| | ||||||||||| ||  || |  || |  |||||  ||||||     
T  53441907 actccctccggtcctatttataagaaacattttacttttttgattcattgcataaatgatgtatttggtatacattctataccaagtacattaattattc 53442006  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||  |||||||||||||| ||||||||||||||||||||    
T  53442007 aatgaatttaaaaagtcaactttttcttataaataggaccggag 53442050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 481
Target Start/End: Complemental strand, 22003939 - 22003881
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||||||| |||||| || ||| || | |||||||||||||||| ||||||||||||||    
T  22003939 ctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtat 22003881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 423 - 481
Target Start/End: Complemental strand, 22011456 - 22011398
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||||||| |||||| || ||| || | |||||||||||||||| ||||||||||||||    
T  22011456 ctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtat 22011398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 439 - 561
Target Start/End: Original strand, 29457861 - 29457982
Alignment:
Q  439 aagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaact 538  Q
    |||| |||| ||||||||| ||| |||| |||| || ||||||||||| ||  || | |||||| |||||  || ||| |||| ||| ||||||| ||||    
T  29457861 aagaaacaatttacttttttgattcattgaatagttgatgtatttggtctat-ttctagactaggtacatcaatcattgaatgaatctaaaaagttaact 29457959  T
Q  539 ttctcttataaataggaccggag 561  Q
    || |||||||||||| |||||||    
T  29457960 ttttcttataaatagaaccggag 29457982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 47449979 - 47449921
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| ||||||||| |||||    
T  47449979 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggatcggag 47449921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 527 - 561
Target Start/End: Complemental strand, 51516997 - 51516963
Alignment:
Q  527 aaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||||||||| ||||||||||||||||||||    
T  51516997 aaaaagtcaactttttcttataaataggaccggag 51516963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 25846596 - 25846653
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| ||||||||||||||  ||||||| || | |||||| ||||||||||||||    
T  25846596 atacataaattatttaatgtatttaaaaagtaaattgtctcttgtaaataggaccgga 25846653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 467
Target Start/End: Original strand, 39341372 - 39341421
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacatta 467  Q
    |||| |||||||| ||||||||||||| || | |||||||||||||||||    
T  39341372 actccctccggtcctatttacaagagaaaattgactttttagatacatta 39341421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 556
Target Start/End: Original strand, 52114109 - 52114162
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggac 556  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| ||||||||||    
T  52114109 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggac 52114162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 439 - 531
Target Start/End: Original strand, 48593163 - 48593255
Alignment:
Q  439 aagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||| |||||| |||||||||||||||| ||||||| ||||||  ||| |||  ||| ||| | ||||||| |||||| |||| ||| |||||    
T  48593163 aagaaacaagtgactttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatctaaaaa 48593255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 6e-54; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 2961252 - 2961109
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||     
T  2961252 actccctctggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattg 2961153  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  2961152 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 2961109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 2352314 - 2352452
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  2352314 ctccggtcctatttacaagagacaatttactttttagatatattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 2352413  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||||| |||||| |||||||||||||||    
T  2352414 atctaaaaagtcaactgtctcttgtaaataggaccggag 2352452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 9302062 - 9301924
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9302062 ctccggtcctatttataagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattatttaatgt 9301963  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||||| |||| |||||| |||||||||||||||    
T  9301962 atctaaaaagttaactgtctcttgtaaataggaccggag 9301924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 10380538 - 10380395
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||     
T  10380538 actccctctggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcatgactagatacatacattattg 10380439  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||| |||||||| |||||||||||||||    
T  10380438 aatgtatctaaaaagtcaattttctcttgtaaataggaccggag 10380395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 423 - 557
Target Start/End: Original strand, 14281595 - 14281729
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  14281595 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 14281694  T
Q  523 atccaaaaagtcaactttctcttataaataggacc 557  Q
    ||| |||||||||||| |||||| |||||||||||    
T  14281695 atctaaaaagtcaactgtctcttgtaaataggacc 14281729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 26550435 - 26550292
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| |||||||| || |||||||||||||||||||     
T  26550435 actccctccggtcatatttataagagacaatttactttttagaaacattaaataatttatgtatttgctttaggttcttaactagatacatacattattc 26550336  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| ||||||||| |||||    
T  26550335 aatgtatctaaaaagtcaactttctcttgtaaataggatcggag 26550292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 33325333 - 33325476
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||     
T  33325333 actccctccgatcatatttacaagagacaatttattttttagatacattaaataatttatgtatctggtttagatttttgactagatacatacattattc 33325432  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| |||||||||||||| |||| |||||||||||||||    
T  33325433 aatgtatctaaaaagtcaactttttcttgtaaataggaccggag 33325476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 23398085 - 23398223
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  23398085 ctccggtcctatttacaagagacaacttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatacattattcaatgt 23398184  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||| | ||| || |||||||||||||||    
T  23398185 atctaaaaagtcaattgtctattgtaaataggaccggag 23398223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 424 - 558
Target Start/End: Complemental strand, 28359213 - 28359079
Alignment:
Q  424 tccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgta 523  Q
    ||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||| ||||||    
T  28359213 tccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggttttggttcttgactagatacatatattattcaatgta 28359114  T
Q  524 tccaaaaagtcaactttctcttataaataggaccg 558  Q
    || ||||| ||||||||||||||||||||||||||    
T  28359113 tctaaaaaatcaactttctcttataaataggaccg 28359079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 29312444 - 29312582
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| |||||    
T  29312444 ctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgactagatacgtacattattcaatgt 29312543  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||  |||||||||||||||| || |||||||||||||||    
T  29312544 atttaaaaagtcaactttctgttgtaaataggaccggag 29312582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 38830488 - 38830626
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||| |||||    
T  38830488 ctccggtcctatttacaagagacaatttactttttagatacattgaataatttatgtatttggtttaggttcttgactagatacatatattattcaatgt 38830587  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||  |||||||||||| |||||| |||||||||||||||    
T  38830588 atttaaaaagtcaactgtctcttgtaaataggaccggag 38830626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 432 - 558
Target Start/End: Complemental strand, 1674106 - 1673980
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||| | |||    
T  1674106 tatttacaagagacaatttattttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatatattatttaatgtatctagaaa 1674007  T
Q  532 gtcaactttctcttataaataggaccg 558  Q
    |||||||||||||| ||||||||||||    
T  1674006 gtcaactttctcttgtaaataggaccg 1673980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 418 - 558
Target Start/End: Complemental strand, 40161320 - 40161181
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||     
T  40161320 actccctccggt-atatttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggtttttgactggatacatacattattc 40161222  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||||||  |||||||||| |||||||| |||||| |||||    
T  40161221 aatgtatttaaaaagtcaattttctcttgtaaatatgaccg 40161181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 426 - 561
Target Start/End: Original strand, 28989280 - 28989415
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatc 525  Q
    ||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||| ||||||||    
T  28989280 cggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttagattcttgactagatacgtacattattcaatgtatc 28989379  T
Q  526 caaaaagtcaactttctcttataaataggaccggag 561  Q
     || |||||||||||||||| |||||| ||||||||    
T  28989380 taataagtcaactttctcttgtaaataagaccggag 28989415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 7796233 - 7796095
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    ||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||| |||||    
T  7796233 ctccggtcatatttacaagtgacaatttattttttagatacattaaataatttatgtatttggtttagattcttgactaaatacatacattattcaatgt 7796134  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||| | | |||||||| |||||||||||||||    
T  7796133 atctaaaaagactattttctcttgtaaataggaccggag 7796095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 9548677 - 9548815
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||| |||| |||||||| ||||| || |||||    
T  9548677 ctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgattagatacacacattcttcaatgt 9548776  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||| |||||||| |||||||||||||||    
T  9548777 atctaaaaagtcaattttctcttgtaaataggaccggag 9548815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 432 - 560
Target Start/End: Original strand, 15289787 - 15289915
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||| ||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  15289787 tatttaaaagagacaatttcttttttagatacattaaataatttatatatttggtttaggttattgactaggtacatacattattcaatgtatctaaaaa 15289886  T
Q  532 gtcaactttctcttataaataggaccgga 560  Q
    |||||||||||||| |||||| |||||||    
T  15289887 gtcaactttctcttgtaaataagaccgga 15289915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 418 - 558
Target Start/End: Original strand, 26733785 - 26733925
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    ||||||||||||| ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||  || ||||||||||||||| |||||||    
T  26733785 actctctccggtcctatttacaagaaacaattaactttttagatacattaaataatctatgtatttggtttatattcttgactagatacataaattattt 26733884  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccg 558  Q
    | | |||| | ||||||||||||||||||||||||||||||    
T  26733885 attttatctataaagtcaactttctcttataaataggaccg 26733925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 10065398 - 10065260
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    ||||| || ||||||||| | |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||||    
T  10065398 ctccgatcctatttacaaaaaacaatttactttttagatacattaaataatttatgtatttgatttaggttcttgacgagatacatacattattcaatgt 10065299  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| ||||| |||| |||||||| |||||||||||||||    
T  10065298 atctaaaaaatcaattttctcttgtaaataggaccggag 10065260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 45536306 - 45536168
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||| |||||||||| |||||    
T  45536306 ctccggtcctatttacaagagataatttactttttagatacatcaaataatttatgtatttggtttaggttcttgacttgataaatacattattgaatgt 45536207  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||||||||| |||||||| ||||||  |||||||    
T  45536206 atctaaaaagtcaattttctcttgtaaataaaaccggag 45536168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 444 - 561
Target Start/End: Original strand, 26545023 - 26545140
Alignment:
Q  444 acaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctc 543  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||||    
T  26545023 acaatttactttttagattcattaaataatttatgtatttggtttaagttcttgactagatacatacattattcaatgtatctaaaaagtcaactttctc 26545122  T
Q  544 ttataaataggaccggag 561  Q
    || |||||| ||||||||    
T  26545123 ttgtaaataagaccggag 26545140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 423 - 561
Target Start/End: Complemental strand, 30264917 - 30264779
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||||||||| | ||| ||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| |||||| |||||    
T  30264917 ctccggtcctatttacaataaacatgttactttttagatatattaaataatttatatatttggtttaggttcttgactagatacatatattattcaatgt 30264818  T
Q  523 atccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||| || ||||||||||||  ||||||||| |||||    
T  30264817 atccaacaaatcaactttctctcgtaaataggatcggag 30264779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 432 - 553
Target Start/End: Complemental strand, 24595052 - 24594932
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||| |||| ||| |||||    
T  24595052 tatttacaagagacaatttactttttagatacattaaataatttatatatttggtttaggttcttgactagatacatacataattcaatg-atctaaaaa 24594954  T
Q  532 gtcaactttctcttataaatag 553  Q
    ||||||||| | ||||||||||    
T  24594953 gtcaactttattttataaatag 24594932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 433 - 558
Target Start/End: Original strand, 6784674 - 6784799
Alignment:
Q  433 atttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaag 532  Q
    ||||||| || |||| ||||||||||||||||||||||||||||| |||||| || ||||| |||| ||||||||||||||||| |||||||| |||||     
T  6784674 atttacaggaaacaatttactttttagatacattaaataatttatatatttgattcaggttcttgattagatacatacattattcaatgtatctaaaaaa 6784773  T
Q  533 tcaactttctcttataaataggaccg 558  Q
    |||||||||| |||||||||||||||    
T  6784774 tcaactttctattataaataggaccg 6784799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 34718891 - 34719027
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||| || |||||||||||| |||||||       
T  34718891 actccctccggtcctatttacaagagacaatttaatttttagatacattaaataatttatgtatttggtttagatttttgactagatacgtacatta--- 34718987  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
        |||| ||||||| |||||||| || |||||||||||||||    
T  34718988 ----tatctaaaaagttaactttcttttgtaaataggaccggag 34719027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 432 - 561
Target Start/End: Complemental strand, 46320283 - 46320162
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||     |||||||||||||||||| |||||| ||   ||| |||||    
T  46320283 tatttacaagagacaatttactttttagatacatcaaataatttatgtatttggt-----ttattgactagatacatatattattcaa---atctaaaaa 46320192  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    |||||| |||||||||||||| || |||||    
T  46320191 gtcaaccttctcttataaataagatcggag 46320162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 418 - 501
Target Start/End: Complemental strand, 23537469 - 23537386
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgacta 501  Q
    |||||||||| || |||||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  23537469 actctctccgatcctatttacaagagacaatttattttttagataaattaaataatttatgtatttggtttaggttcttgacta 23537386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 9301919 - 9302062
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | ||||||||||||||||||||||| ||||||| | ||  ||    |  || | ||||||| |||||||    
T  9301919 actccctccggtcctatttacaagagacagttaactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 9302018  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | ||||||||||||||||||||||    
T  9302019 aatgtatctaaaaagtaaattgtctcttataaataggaccggag 9302062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 370 - 416
Target Start/End: Original strand, 19487505 - 19487551
Alignment:
Q  370 caagcatgattgatcacaataaataatgacaaacattagcagcagaa 416  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  19487505 caagcatgattgatcacaataaataatgacaaacattagcagcagaa 19487551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 432 - 558
Target Start/End: Original strand, 24463304 - 24463429
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||| |||||| ||| |||||||||| |||||||||||||| ||||||||||| ||| ||||  | |||||||||||||| |||| ||  |||||    
T  24463304 tatttacaaaagacaattta-tttttagatatattaaataatttatatatttggtttatgttcttgatcaaatacatacattattgaatgaatttaaaaa 24463402  T
Q  532 gtcaactttctcttataaataggaccg 558  Q
     |||||||| | || |||||| |||||    
T  24463403 atcaactttttattgtaaatatgaccg 24463429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 2352457 - 2352314
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||    
T  2352457 actccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 2352358  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||| |||| ||||||| || | |||||| |||||||||||||||    
T  2352357 aatatatctaaaaagtaaattgtctcttgtaaataggaccggag 2352314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 43929346 - 43929488
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||| || |||| |||| ||||||||| ||| ||||||||| || ||||||||||| ||  || |   |||| |||||  ||||||     
T  43929346 actccctccggtcctatatataagaaacaatttacttttttgattcattaaatagttgatgtatttggtctat-ttctaagctaggtacatcaattattg 43929444  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| ||||||| |||||| ||||||||||||||||||||    
T  43929445 aatgaatctaaaaagttaactttttcttataaataggaccggag 43929488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 26733933 - 26733790
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    ||||||| ||||| |||||| |||||| ||||| ||||| |||||| | |||||||||||||||| | ||  ||  |||  || | ||||||| ||||||    
T  26733933 actctcttcggtcctatttataagaga-aagttgactttatagataaaataaataatttatgtatctagtcaagaatataaaccaaatacatagattatt 26733835  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| ||||||| || | | |||| |||||||||||||||    
T  26733834 taatgtatctaaaaagttaattgtttcttgtaaataggaccggag 26733790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 23398228 - 23398165
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||| |||||| | |||||||||||||||| |||||| |||||||    
T  23398228 actccctccggtcctatttacaatagacaattgactttttagatacattgaataatgtatgtat 23398165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 26070972 - 26070829
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    ||||||||||||| |||||| |||| |||  ||||||||| ||| ||||  |||| | ||||||||||| ||  || | ||  ||||||||  |||| |     
T  26070972 actctctccggtcttatttataagaaacattttacttttttgattcattgcataaataatgtatttggtctatattctagataagatacatcaattactc 26070873  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| |||||||||| |||| |||||||||| ||||||||    
T  26070872 aatgaatctaaaaagtcaaatttcacttataaataagaccggag 26070829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 38830631 - 38830488
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | |||||||| ||||||| |||||| ||||||| | ||  ||    |  || | ||||||| ||||||     
T  38830631 actccctccggtcctatttacaagagacagttgactttttaaatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattattc 38830532  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  38830531 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 38830488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 423 - 557
Target Start/End: Original strand, 10380395 - 10380529
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||||||||||||| || | |||||||||||||||| |||||| ||||||| | ||   |    |  || | ||||||| ||||||||||||    
T  10380395 ctccggtcctatttacaagagaaaattgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatgt 10380494  T
Q  523 atccaaaaagtcaactttctcttataaataggacc 557  Q
    ||| ||||||| || | |||||| |||||||||||    
T  10380495 atctaaaaagtaaattgtctcttgtaaataggacc 10380529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 561
Target Start/End: Complemental strand, 14281729 - 14281595
Alignment:
Q  427 ggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatcc 526  Q
    |||| |||||||||||||||  | |||||||||||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||| ||||||||     
T  14281729 ggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatct 14281630  T
Q  527 aaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| || | |||||| |||||||||||||||    
T  14281629 aaaaagtaaattgtctcttgtaaataggaccggag 14281595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 29312502 - 29312444
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||||||||||||||    
T  29312502 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 29312444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 423 - 560
Target Start/End: Complemental strand, 49944976 - 49944839
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||| ||||||||||| |||  | | ||||| ||| ||||  |||| | ||||||||||| ||  || | ||| ||||||||  |||||| ||||     
T  49944976 ctccggtcctatttacaagaaacatttgatttttttgattcattgtataaatgatgtatttggtctatattctagacaagatacatcaattattcaatga 49944877  T
Q  523 atccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||| ||||||| || ||| |||||||||||||||||||    
T  49944876 atctaaaaagttaaatttttcttataaataggaccgga 49944839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 561
Target Start/End: Original strand, 50155356 - 50155441
Alignment:
Q  476 atgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||||| ||  |||| ||| | ||||||  |||| | |||| ||| |||||||||||||| ||||||||||||||||||||    
T  50155356 atgtatttggtctatattatagaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggag 50155441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 557
Target Start/End: Original strand, 2961104 - 2961243
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||   |    |  || | ||||||| ||||||    
T  2961104 actccctccggtcctatttacaagaga-aagttgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatt 2961202  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggacc 557  Q
    ||||||||| ||||||| || | |||||| |||||||||||    
T  2961203 taatgtatctaaaaagtaaattgtctcttgtaaataggacc 2961243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 549
Target Start/End: Complemental strand, 29892278 - 29892149
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||| | || |||| | ||||||||||| |||| ||||||| || ||| |||||||| || | |||  |||||||| ||||||     
T  29892278 actccctccggtcctatttataggaaacaattgactttttagattcattcaataattgatatatctggtttagattttagaccggatacataaattattc 29892179  T
Q  518 aatgtatccaaaaagtcaactttctcttataa 549  Q
    ||  |||| |||||||||||| | ||||||||    
T  29892178 aa--tatctaaaaagtcaactgtttcttataa 29892149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 7796090 - 7796233
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| ||    ||||||||||||||| |||||| ||||||||| ||  ||  | |  || | ||||||| |||||||    
T  7796090 actccctccggtcctatttacaagagaaaatagtctttttagatacattgaataatgtatgtatttagtcaagaatctaaaccaaatacataaattattt 7796189  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| | || | || ||| |||||| ||||||||    
T  7796190 aatgtatctaaaaaataaattgtcacttgtaaatatgaccggag 7796233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 481
Target Start/End: Original strand, 10065255 - 10065318
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||||||| || | | |||||||||||||| |||||| |||||||    
T  10065255 actccctccggtcctatttacaagagaaaattgattttttagatacattgaataatgtatgtat 10065318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Original strand, 19487476 - 19487507
Alignment:
Q  270 caaaagagagttgattgaatatctttgatcaa 301  Q
    ||||||||||||||||||||||||||||||||    
T  19487476 caaaagagagttgattgaatatctttgatcaa 19487507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 481
Target Start/End: Complemental strand, 26545140 - 26545082
Alignment:
Q  423 ctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  26545140 ctccggtcttatttacaagaga-aagttgactttttagatacattgaataatgtatgtat 26545082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 423 - 561
Target Start/End: Original strand, 26550292 - 26550430
Alignment:
Q  423 ctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    ||||| || ||||||||||||| ||||| |||||||||||||||| |||||| ||||||| | ||| ||    |  |  | ||||||| |||||||||||    
T  26550292 ctccgatcctatttacaagaga-aagttgactttttagatacattgaataatgtatgtatctagttaagaacctaaagcaaatacataaattatttaatg 26550390  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    | || ||||||| || | ||||||||||||| ||||||||    
T  26550391 tttctaaaaagtaaattgtctcttataaatatgaccggag 26550430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 518 - 561
Target Start/End: Original strand, 29256698 - 29256741
Alignment:
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| |||||||||||||| ||||||||||||||||||||    
T  29256698 aatgaatctaaaaagtcaactttttcttataaataggaccggag 29256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 481
Target Start/End: Complemental strand, 33325480 - 33325418
Alignment:
Q  419 ctctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||||||||||| ||||||||||| | ||||| |||||||||||||||| |||||| |||||||    
T  33325480 ctctctccggtcctatttacaagaaa-aagttgactttttagatacattgaataatgtatgtat 33325418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 481
Target Start/End: Original strand, 40161181 - 40161236
Alignment:
Q  426 cggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    ||||||||||||||||||| || | |||||||| ||||||| |||||| |||||||    
T  40161181 cggtcatatttacaagagaaaattgactttttaaatacattgaataatgtatgtat 40161236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 483
Target Start/End: Original strand, 1673980 - 1674037
Alignment:
Q  426 cggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtattt 483  Q
    ||||| ||||||||||||| ||||| ||||| ||||||||||||||||| |||||||||    
T  1673980 cggtcctatttacaagaga-aagttgactttctagatacattaaataatatatgtattt 1674037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 9548735 - 9548677
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | | |||| |||||||||||||||    
T  9548735 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggag 9548677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 527 - 561
Target Start/End: Complemental strand, 26924252 - 26924218
Alignment:
Q  527 aaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||||||||| ||||||||||||||||||||    
T  26924252 aaaaagtcaactttttcttataaataggaccggag 26924218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 34718954 - 34718896
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||| | || | |||||| |||||||||||||||    
T  34718954 atacataaattatttaatgtatctaaaaattaaattgtctcttgtaaataggaccggag 34718896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Original strand, 45536248 - 45536306
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||| ||||||| ||||||| || | |||||| |||||||||||||||    
T  45536248 atacataaattatttgatgtatctaaaaagtaaattatctcttgtaaataggaccggag 45536306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 423 - 464
Target Start/End: Original strand, 2512416 - 2512457
Alignment:
Q  423 ctccggtcatatttacaagagacaagttactttttagataca 464  Q
    ||||| || |||||||||||||||| ||||||||||||||||    
T  2512416 ctccgatcctatttacaagagacaatttactttttagataca 2512457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 424 - 480
Target Start/End: Complemental strand, 15289915 - 15289859
Alignment:
Q  424 tccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgta 480  Q
    ||||||| ||||||||||||| ||||| |||||||||||||||| |||||| ||||||    
T  15289915 tccggtcttatttacaagaga-aagttgactttttagatacattgaataatgtatgta 15289859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 560
Target Start/End: Original strand, 28359156 - 28359213
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||| ||||||||||||||| ||||||| || | | |||| ||||||||||||||    
T  28359156 atacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccgga 28359213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 560
Target Start/End: Complemental strand, 47946056 - 47946007
Alignment:
Q  511 attatttaatgtatccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||||||||||| ||| ||||||||||  || |||||||||||||||||||    
T  47946056 attatttaatgaatctaaaaagtcaagcttttcttataaataggaccgga 47946007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 466
Target Start/End: Complemental strand, 9548820 - 9548772
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacatt 466  Q
    |||| |||||||| ||||||||||||| || | ||||||||||||||||    
T  9548820 actccctccggtcctatttacaagagaaaattgactttttagatacatt 9548772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 501 - 561
Target Start/End: Original strand, 38040359 - 38040419
Alignment:
Q  501 agatacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||  |||| | |||| ||| |||||||||| ||| ||||||||||||||||||||    
T  38040359 agatacatcaattaatcaatgaatctaaaaagtcaaatttttcttataaataggaccggag 38040419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 104; Significance: 1e-51; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 492453 - 492310
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||| ||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||     
T  492453 actccctccagtcctatttacaagaaacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactaaatacatacattattc 492354  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||| |||||||||||||||||||||||||||||    
T  492353 aatgtatctaaaaaatcaactttctcttataaataggaccggag 492310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 100; Significance: 3e-49; HSPs: 3)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 11030 - 11173
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||| ||||||     
T  11030 actccctccggtcctttttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaagttcttgattagatacatatattattc 11129  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||||||||||||||| |||||||||||||||    
T  11130 aatgtatctaaaaagtcaactttctcttgtaaataggaccggag 11173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 11178 - 11115
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||||||| ||||| |||||||||||||||| |||||| |||||||    
T  11178 actccctccggtcctatttacaagaga-aagttgactttttagatacattgaataatatatgtat 11115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 561
Target Start/End: Complemental strand, 11093 - 11035
Alignment:
Q  503 atacatacattatttaatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||| ||||||||||||||| ||||||| || | |||||| |||| ||||||||||    
T  11093 atacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaaaaggaccggag 11035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 100; Significance: 3e-49; HSPs: 2)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 422 - 561
Target Start/End: Original strand, 38829 - 38968
Alignment:
Q  422 tctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    ||||||||| || ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  38829 tctccggtcctagttacaagagacaatttactttttagatacattaaataatttatgtatttggtttaggttcttgactagatacatacattattcaatg 38928  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||  |||| ||||||| |||||| |||||||||||||||    
T  38929 tatttaaaatgtcaactgtctcttgtaaataggaccggag 38968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 38973 - 38830
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||  | || ||||| ||||||| |||||| ||||||| | ||  ||    |  || | ||||||| |||||||    
T  38973 actccctccggtcctatttacaagagacagttgacattttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 38874  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| ||| |||||||||||    
T  38873 aatgtatctaaaaagtaaattgtctcttgtaactaggaccggag 38830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 98; Significance: 5e-48; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 432 - 561
Target Start/End: Original strand, 457 - 586
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||| |||||    
T  457 tatttacaagaaacaatttactttttagatacattaaataatttatgtatttcgtttaggttcttgactagatacatacattattcaatgtatctaaaaa 556  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    ||||| |||||||| |||||||||||||||    
T  557 gtcaattttctcttgtaaataggaccggag 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 481
Target Start/End: Complemental strand, 591 - 528
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtat 481  Q
    |||| |||||||| ||||||||||||| || | |||||||||||||||| |||||| |||||||    
T  591 actccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtat 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 96; Significance: 8e-47; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 35954 - 36097
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||| |||||||     
T  35954 actccctccggtcctatttacaagagacaatttactttttagatacattaaataatttatgtattttgtttaggttcttaactagatacatgcattattg 36053  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||| ||| |||||||||| |||||||| |||||||||||||||    
T  36054 aatgcatctaaaaagtcaattttctcttgtaaataggaccggag 36097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 36102 - 35959
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| ||||||||||||| || | ||||||||||| |||| ||||||  |||||| | ||| ||    |  || | ||||||| |||||||    
T  36102 actccctccggtcctatttacaagagaaaattgactttttagatgcattcaataatgcatgtatctagttaagaacctaaacaaaatacataaattattt 36003  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    |||||||| ||||||| || | |||||| |||||||||||||||    
T  36002 aatgtatctaaaaagtaaattgtctcttgtaaataggaccggag 35959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 92; Significance: 2e-44; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 418 - 561
Target Start/End: Complemental strand, 77492 - 77350
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattattt 517  Q
    |||| |||||||| |||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||| || ||||||| ||||||| ||||||     
T  77492 actccctccggtcctatttataagagacaa-ttaatttttagatacattaaataatttatgtatttggtttagattcttgactacatacataaattattc 77394  T
Q  518 aatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||  ||||||||||||||||||||||||||||||||||    
T  77393 aatgtatctgaaaagtcaactttctcttataaataggaccggag 77350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 418 - 561
Target Start/End: Original strand, 77345 - 77487
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtt-actttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatt 516  Q
    |||| |||||||| |||||| |||||| ||||| |||||| ||||||||| |||||||||||||| | ||  ||  | |  || | ||||||| ||||||    
T  77345 actccctccggtcctatttataagaga-aagttgacttttcagatacattgaataatttatgtatgtagtcaagaatctaaaccaaatacataaattatt 77443  T
Q  517 taatgtatccaaaaagtcaactttctcttataaataggaccggag 561  Q
    ||||||||| ||||| | || | ||||||||||||||||||||||    
T  77444 taatgtatctaaaaatt-aattgtctcttataaataggaccggag 77487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0592 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 432 - 561
Target Start/End: Original strand, 393 - 522
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    |||||| |||||| || |||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||||||| |||||    
T  393 tatttataagagaaaatttactttttagatatattaaataatttatatatatggtttaggttcttgactagatacatacattattcaatgtatctaaaaa 492  T
Q  532 gtcaactttctcttataaataggaccggag 561  Q
    |||||| ||||||| ||||||||| |||||    
T  493 gtcaaccttctcttgtaaataggatcggag 522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 82; Significance: 2e-38; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 432 - 560
Target Start/End: Complemental strand, 3774 - 3637
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttat---------gtatttggtttaggttattgactagatacatacattatttaatgt 522  Q
    |||||||||||||||| |||||||||||||||||||||||||||||         |||||||||||||||| ||||||| |||||||||||||| |||||    
T  3774 tatttacaagagacaatttactttttagatacattaaataatttatataatttatgtatttggtttaggttcttgactaaatacatacattattcaatgt 3675  T
Q  523 atccaaaaagtcaactttctcttataaataggaccgga 560  Q
    ||| |||||||||||||||| |||||||||||||||||    
T  3674 atctaaaaagtcaactttcttttataaataggaccgga 3637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 422 - 558
Target Start/End: Original strand, 15159 - 15294
Alignment:
Q  422 tctccggtcatatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatg 521  Q
    ||||| ||| ||||||||| | |||| || |||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||||||| ||||    
T  15159 tctcctgtcctatttacaataaacaatttgctttttagatacattaaataatttatgtatttggtttaggttcttgacta-atacgtacattattcaatg 15257  T
Q  522 tatccaaaaagtcaactttctcttataaataggaccg 558  Q
    |||| ||||||| ||||||||||| ||||||||||||    
T  15258 tatctaaaaagttaactttctcttgtaaataggaccg 15294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 482
Target Start/End: Complemental strand, 15302 - 15238
Alignment:
Q  418 actctctccggtcatatttacaagagacaagtta-ctttttagatacattaaataatttatgtatt 482  Q
    ||||||| ||||| ||||||||||||| |||||| ||||||||||||||| |||||| || |||||    
T  15302 actctcttcggtcctatttacaagaga-aagttaactttttagatacattgaataatgtacgtatt 15238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 432 - 558
Target Start/End: Original strand, 5230 - 5356
Alignment:
Q  432 tatttacaagagacaagttactttttagatacattaaataatttatgtatttggtttaggttattgactagatacatacattatttaatgtatccaaaaa 531  Q
    ||||||||||| |||| |||||||||  ||| |||||||||||||| ||||||||||||||| ||||||| ||||||| |||||| ||| |||| |||||    
T  5230 tatttacaagaaacaatttacttttttaatatattaaataatttatatatttggtttaggttcttgactaaatacatatattattcaatttatctaaaaa 5329  T
Q  532 gtcaactttctcttataaataggaccg 558  Q
    || || |||||||| ||||||| ||||    
T  5330 gttaattttctcttgtaaatagaaccg 5356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0314 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Original strand, 17848 - 17892
Alignment:
Q  418 actctctccggtcatatttacaagagacaagttactttttagata 462  Q
    ||||||||||||| |||||||||  ||||| ||||||||||||||    
T  17848 actctctccggtcttatttacaatggacaatttactttttagata 17892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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