View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF17872_low_1 (Length: 757)
Name: NF17872_low_1
Description: NF17872
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17872_low_1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 660; Significance: 0; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 660; E-Value: 0
Query Start/End: Original strand, 19 - 750
Target Start/End: Complemental strand, 3401115 - 3400397
Alignment:
| Q |
19 |
gcagccatacttatgggcaggtggttatgcccgtattttaccatgttgacccatcgcatgtccgtaaactggaaggtaattttggaacaatttttgaact |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
3401115 |
gcagccatacttatgggcaggtggttatgcccgtattttaccatgttgacccatcgcatgtccgtaagctggaaggtaattttggaacaatttttgaact |
3401016 |
T |
|
| Q |
119 |
ccatgcaattcatagagagcatgaactgttgtccaagtggaagaccgtactcaatgaagtttcaaatctgtctggctgggatctcaacaatatcaggtaa |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3401015 |
ccatgcaattcatagagagcatgaactgttgtccaagtggaagaccgtactcactgaagtttcaaatctgtctggctgggatctcaacaatatcaggtaa |
3400916 |
T |
|
| Q |
219 |
ggtaatcaatacttatatttgatagtaaagcgtactttcttttgagattatttcatgattgattaatgctcattctttgtctttgtaactgttattatta |
318 |
Q |
| |
|
||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3400915 |
ggtaatcaatact-------------aaagcgtaatttcttttgagattatgtcatgattgattaatgctcattctttgtctttgtaactgttattatta |
3400829 |
T |
|
| Q |
319 |
cccaagtaatgaaggtgaactagtgaagcaaattgtcgaggacactttggcaaaactagatatctcattgttgtctattaccgaatatccggttggattg |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
3400828 |
cccaagtaatgaaggtgaactagtgaagcaaattgttgaggacactttggcaaaactagatatctcattgttgtctattactgaatatccggttggattg |
3400729 |
T |
|
| Q |
419 |
gattcccgtgtgcaacaaattaccaagtttattgatcatcaatcaacagaagtctgtatgatagggatatggggaatgggtggatccgggaaaacaacca |
518 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3400728 |
gattcccgtgtgcaacaaattaccaagtttattgatcatcaatcaacagaagtctgtatgatagggatatggggaatgggtggatccgggaaaacaacca |
3400629 |
T |
|
| Q |
519 |
cggccaaagctatctacaaccaaatccgttctagatttaagggtagagcaagtttcatcgaaagtattcgagaagtttgtgataataataatagaggggt |
618 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3400628 |
cggccaaagctatctacaatcaaatccgttctagatttaagggtagagcaagtttcatcgaaagtattcgagaagtttgtgataataataatagaggggt |
3400529 |
T |
|
| Q |
619 |
tattcctttacaacaacaacttcttttagatctcttgaaaataaaacaagagattcatagcattgcctcagggataactaagattgagaaaagacttcga |
718 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3400528 |
tattcctttacaacaacaacttcttttagatctcttgaaaataaaacaagagattcatagcattgcctcagggataactaagattgagaaaagacttcga |
3400429 |
T |
|
| Q |
719 |
ggacaaacagtttttgtcatacttgatgatgt |
750 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
3400428 |
ggacaaacagtttttgtcatacttgatgatgt |
3400397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 260; E-Value: 1e-144
Query Start/End: Original strand, 284 - 725
Target Start/End: Original strand, 31173688 - 31174126
Alignment:
| Q |
284 |
atgctcattctttgtctttgtaactgttattattacccaagtaatgaaggtgaactagtgaagcaaattgtcgaggacactttggcaaaactagatatct |
383 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| ||| |||| ||||||| |||||||||||| |||| || |||| || ||||||||||| |
|
|
| T |
31173688 |
atgctcattctttgtctttgtaact---attattacccaaggaataaaggggaactagcgaagcaaattgttgaggccattttgaaaatactagatatct |
31173784 |
T |
|
| Q |
384 |
cattgttgtctattaccgaatatccggttggattggattcccgtgtgcaacaaattaccaagtttattgatcatcaatcaacagaagtctgtatgatagg |
483 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||||||||||||||| ||||||||| ||||||| |||||||| |
|
|
| T |
31173785 |
cattgttgtctattactaaatatccgattggattggaatcccgtgtgcaaaaaattaccaagtttattgataatcaatcaaacaaagtctgcatgatagg |
31173884 |
T |
|
| Q |
484 |
gatatggggaatgggtggatccgggaaaacaaccacggccaaagctatctacaaccaaatccgttctagatttaagggtagagcaagtttcatcgaaagt |
583 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||| ||| | |||||| |||||||| | |||||| |
|
|
| T |
31173885 |
gatatggggaatgggtggatccgggaaaacaaccacagccaaagctatctacaataaaatccatcgtaggtttgaaggtagaacaagtttctttgaaagt |
31173984 |
T |
|
| Q |
584 |
attcgagaagtttgtgataataataatagaggggttattcctttacaacaacaacttcttttagatctcttgaaaataaaacaagagattcatagcattg |
683 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
31173985 |
attcgagaagtttgtgataataattctagaggggttattcatttacaacaacaacttcttttagatctcctgcaaataaaacaagagattcatagcattg |
31174084 |
T |
|
| Q |
684 |
cctcagggataactaagattgagaaaagacttcgaggacaaa |
725 |
Q |
| |
|
| | ||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
31174085 |
cattggggatgactaagatagagaaaagacttcgaggacaaa |
31174126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 389 - 644
Target Start/End: Complemental strand, 3288590 - 3288338
Alignment:
| Q |
389 |
ttgtctattaccgaatatccggttggattggattcccgtgtgcaacaaattaccaagtttattgatcatcaatcaacagaagtctgtatgatagggatat |
488 |
Q |
| |
|
|||||||||||| ||| ||| ||||||||||| ||||| ||||||||| | | |||||||| | ||||||||| |||| ||| ||| |||||| | |
|
|
| T |
3288590 |
ttgtctattaccaaatttccagttggattggagtcccgggtgcaacaagtgattcagtttattcaaaatcaatcaagcaaagtttgtttgacagggatct |
3288491 |
T |
|
| Q |
489 |
ggggaatgggtggatccgggaaaacaaccacggccaaagctatctacaaccaaatccgttctagatttaagggtagagcaagtttcatcgaaagtattcg |
588 |
Q |
| |
|
||||||||||||| || ||||||||||| || ||||||||||||| ||| ||||| || | ||||| | | ||||||||||| |||| |||| | |
|
|
| T |
3288490 |
ggggaatgggtgggtcggggaaaacaacaacagccaaagctatcttcaatcaaattaatttgaaatttatgcat---gcaagtttcattgaaaatattag |
3288394 |
T |
|
| Q |
589 |
agaagtttgtgataataataatagaggggttattcctttacaacaacaacttcttt |
644 |
Q |
| |
|
|||||||||| || ||| |||||||| |||| | |||||||||||||||||||| |
|
|
| T |
3288393 |
agaagtttgtataaaaaatgatagagggattatacatttacaacaacaacttcttt |
3288338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 468 - 657
Target Start/End: Complemental strand, 3264585 - 3264399
Alignment:
| Q |
468 |
aagtctgtatgatagggatatggggaatgggtggatccgggaaaacaaccacggccaaagctatctacaaccaaatccgttctagatttaagggtagagc |
567 |
Q |
| |
|
|||| |||||||| || ||||||||||||||||| | || ||||||||||| |||||||| ||||||||||||||| | | |||| ||| || |
|
|
| T |
3264585 |
aagtttgtatgatgggaatatggggaatgggtgggttgggtaaaacaaccacagccaaagccgtctacaaccaaatccatcgcaaatttgaggata---a |
3264489 |
T |
|
| Q |
568 |
aagtttcatcgaaagtattcgagaagtttgtgataataataatagaggggttattcctttacaacaacaacttcttttagatctcttgaa |
657 |
Q |
| |
|
|||||||||||||| |||| ||||||||| ||| || ||| || ||| |||||| ||||||||| |||||||||| |||| ||||||| |
|
|
| T |
3264488 |
aagtttcatcgaaaatattagagaagtttatgaaaaatatagtactgggattattcatttacaacagcaacttctttcagatatcttgaa |
3264399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 328 - 543
Target Start/End: Complemental strand, 7166863 - 7166648
Alignment:
| Q |
328 |
tgaaggtgaactagtgaagcaaattgtcgaggacactttggcaaaactagatatctcattgttgtctattaccgaatatccggttggattggattcccgt |
427 |
Q |
| |
|
||||| |||||||||| |||||||||| ||||| ||||||||||||||| | | ||| |||||||||| ||||| ||| ||||||||||| || || |
|
|
| T |
7166863 |
tgaagctgaactagtgcagcaaattgttgaggatcttttggcaaaactagacaacgcatccttgtctattatcgaatttccagttggattggaatctcgc |
7166764 |
T |
|
| Q |
428 |
gtgcaacaaattaccaagtttattgatcatcaatcaacagaagtctgtatgatagggatatggggaatgggtggatccgggaaaacaaccacggccaaag |
527 |
Q |
| |
|
|||| || ||| | ||||||| ||| ||| |||| |||||||||||||||||||||||||| | || || ||||||||||| ||||||| |
|
|
| T |
7166763 |
atgcacaaagttattgaatttattgcaactcagccaagcaaagtttgtatgatagggatatggggaatgggcaggtcgggtaaaacaaccacagccaaag |
7166664 |
T |
|
| Q |
528 |
ctatctacaaccaaat |
543 |
Q |
| |
|
| ||||| || ||||| |
|
|
| T |
7166663 |
ccatctataatcaaat |
7166648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 390 - 644
Target Start/End: Complemental strand, 3269321 - 3269070
Alignment:
| Q |
390 |
tgtctattaccgaatatccggttggattggattcccgtgtgcaacaaattaccaagtttattgatcatcaatcaacagaagtctgtatgatagggatatg |
489 |
Q |
| |
|
|||||||||| |||| ||| ||||||||| | | |||||||||||| | | |||||||||| | ||||||| |||| || ||||||||||| || |
|
|
| T |
3269321 |
tgtctattactgaatttccagttggattgcacacacgtgtgcaacaagtgattcagtttattgaaaaacaatcaagcaaagtttgcatgatagggatctg |
3269222 |
T |
|
| Q |
490 |
gggaatgggtggatccgggaaaacaaccacggccaaagctatctacaaccaaatccgttctagatttaagggtagagca-agtttcatcgaaagtattcg |
588 |
Q |
| |
|
||| ||||||||||| || |||||||| || |||| || |||||||||| |||| | | | |||| ||||| || |||||||| |||| |||| | |
|
|
| T |
3269221 |
gggtatgggtggatcaggtaaaacaacaacagccagagatatctacaacaaaattcatcgcaaattt----gtagatcacagtttcattgaaaatattag |
3269126 |
T |
|
| Q |
589 |
agaagtttgtgataataataatagaggggttattcctttacaacaacaacttcttt |
644 |
Q |
| |
|
|||||||| ||| || | ||||||||| ||| || ||||||| |||||||||||| |
|
|
| T |
3269125 |
agaagtttatgaaaaggaaaatagagggattactcatttacaagaacaacttcttt |
3269070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 482 - 543
Target Start/End: Original strand, 13785673 - 13785734
Alignment:
| Q |
482 |
gggatatggggaatgggtggatccgggaaaacaaccacggccaaagctatctacaaccaaat |
543 |
Q |
| |
|
||||| ||||| ||||||||||| |||||||||||||| |||||||| |||||||| ||||| |
|
|
| T |
13785673 |
gggatctggggtatgggtggatcggggaaaacaaccacagccaaagccatctacaatcaaat |
13785734 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 310 - 380
Target Start/End: Complemental strand, 3264785 - 3264715
Alignment:
| Q |
310 |
ttattattacccaagtaatgaaggtgaactagtgaagcaaattgtcgaggacactttggcaaaactagata |
380 |
Q |
| |
|
||||||| ||||||| ||||||||||||||| || |||||||||| | |||| ||||| ||||||||||| |
|
|
| T |
3264785 |
ttattatcacccaaggaatgaaggtgaactaatgcagcaaattgtggcggacgttttggaaaaactagata |
3264715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 3270042 - 3269997
Alignment:
| Q |
29 |
ttatgggcaggtggttatgcccgtattttaccatgttgacccatcg |
74 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
3270042 |
ttatggacaggtggttatgcccatattttaccacgttgacccatcg |
3269997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 31173442 - 31173488
Alignment:
| Q |
27 |
acttatgggcaggtggttatgcccgtattttaccatgttgacccatc |
73 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||| |||||||||||||| |
|
|
| T |
31173442 |
acttatggccaggtggtcatgccagtattttatcatgttgacccatc |
31173488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 224; Significance: 1e-123; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 258 - 684
Target Start/End: Original strand, 20836263 - 20836696
Alignment:
| Q |
258 |
ttttgagattatttcatgattgattaatgctcattctttgtctttgtaactgtt-------attattacccaagtaatgaaggtgaactagtgaagcaaa |
350 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||||||| ||| || |
|
|
| T |
20836263 |
ttttgagattatgtcatgattgattaatgctcattctttgtctttgtaactgtttattattattattaccctaggaatgaaggtgaactagtggagctaa |
20836362 |
T |
|
| Q |
351 |
ttgtcgaggacactttggcaaaactagatatctcattgttgtctattaccgaatatccggttggattggattcccgtgtgcaacaaattaccaagtttat |
450 |
Q |
| |
|
|||| ||||||| |||| |||||||||||||||||||||||||||||| |||| |||| |||||||||| |||| ||||||||||||||||||| |||| |
|
|
| T |
20836363 |
ttgttgaggacattttgagaaaactagatatctcattgttgtctattactgaatttccgattggattggaatcccatgtgcaacaaattaccaagattat |
20836462 |
T |
|
| Q |
451 |
tgatcatcaatcaacagaagtctgtatgatagggatatggggaatgggtggatccgggaaaacaaccacggccaaagctatctacaaccaaatccgttct |
550 |
Q |
| |
|
|||| |||||||| |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||| | | |
|
|
| T |
20836463 |
tgatgatcaatcatgcaaagtctgtatcatagggatatggggaatgggtggattaggcaaaacaaccacggccaaagctctctacaatcaaatccatcgt |
20836562 |
T |
|
| Q |
551 |
agatttaagggtagagcaagtttcatcgaaagtattcgagaagtttgtgataataataatagaggggttattcctttacaacaacaacttcttttagatc |
650 |
Q |
| |
|
||||| |||||||| |||||||| | ||||||||| ||||||||||||||||||||| | ||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
20836563 |
agattccagggtagaacaagtttccttgaaagtattagagaagtttgtgataataatagtggaggggttattactttacaagaacaacttcttttagatc |
20836662 |
T |
|
| Q |
651 |
tcttgaaaataaaacaagagattcatagcattgc |
684 |
Q |
| |
|
|| | |||||||||| ||||||| || ||||| |
|
|
| T |
20836663 |
tccttgaaataaaacagaagattcacagtattgc |
20836696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 266 - 676
Target Start/End: Original strand, 20809916 - 20810333
Alignment:
| Q |
266 |
ttatttcatgattgattaatgctcattctttgtctttgtaactgtt-------attattacccaagtaatgaaggtgaactagtgaagcaaattgtcgag |
358 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||||| ||||||||| || ||||||||||||||||||||| ||||| ||| |
|
|
| T |
20809916 |
ttatgtcatgattgattaatgctcattttttgtctttgtaactgtttattattattattaccgtaggaatgaaggtgaactagtgaagggtattgttgag |
20810015 |
T |
|
| Q |
359 |
gacactttggcaaaactagatatctcattgttgtctattaccgaatatccggttggattggattcccgtgtgcaacaaattaccaagtttattgatcatc |
458 |
Q |
| |
|
||| |||| |||||||| |||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
20810016 |
tacattttgacaaaactaaatatctcattgttgtctattactgaatatccaattggattggaatcccgtgtgcaacaaattaccaagattattgatgatc |
20810115 |
T |
|
| Q |
459 |
aatcaacagaagtctgtatgatagggatatggggaatgggtggatccgggaaaacaaccacggccaaagctatctacaaccaaatccgttctagatttaa |
558 |
Q |
| |
|
||||| |||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||| ||||||| | |||||| | |
|
|
| T |
20810116 |
aatcatggaaagtctgtatcatagggatatggggaatgggtggatcaggcaaaacaaccacggccaaagctctctacaatcaaatccatcgtagattcca |
20810215 |
T |
|
| Q |
559 |
gggtagagcaagtttcatcgaaagtattcgagaagtttgtgataataataatagaggggttattcctttacaacaacaacttcttttagatctcttgaaa |
658 |
Q |
| |
|
||||||| |||||||| | ||||||||| ||||||||||||||||||||| |||||||| |||| |||||||| |||||||||||||||||||||| || |
|
|
| T |
20810216 |
gggtagaacaagtttcgttgaaagtattagagaagtttgtgataataatagtagaggggctattactttacaaaaacaacttcttttagatctctttgaa |
20810315 |
T |
|
| Q |
659 |
ataaaacaagagattcat |
676 |
Q |
| |
|
||||| || |||||||| |
|
|
| T |
20810316 |
ataaagcagaagattcat |
20810333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 125; Significance: 6e-64; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 125; E-Value: 6e-64
Query Start/End: Original strand, 286 - 750
Target Start/End: Complemental strand, 8373968 - 8373504
Alignment:
| Q |
286 |
gctcattctttgtctttgtaactgttattattacccaagtaatgaaggtgaactagtgaagcaaattgtcgaggacactttggcaaaactagatatctca |
385 |
Q |
| |
|
||||||| ||| ||||| ||||| || ||||||||||| ||||||||||| | || || || |||| ||||||| |||| ||||||||||||| ||| |
|
|
| T |
8373968 |
gctcattttttttctttataactattcctattacccaaggaatgaaggtgatttggtacagaaacttgttgaggacattttgacaaaactagatatgtca |
8373869 |
T |
|
| Q |
386 |
ttgttgtctattaccgaatatccggttggattggattcccgtgtgcaacaaattaccaagtttattgatcatcaatcaacagaagtctgtatgataggga |
485 |
Q |
| |
|
||||||||||||| |||| ||| ||||||||||| | || || ||| ||||||||| || || || || |||||| ||| |||||||||||| |
|
|
| T |
8373868 |
gtgttgtctattactgaatttccagttggattggaacctcgcgtacaaagcattaccaagattctttatgatgaatcaaggaaagcctgtatgataggat |
8373769 |
T |
|
| Q |
486 |
tatggggaatgggtggatccgggaaaacaaccacggccaaagctatctacaaccaaatccgttctagatttaagggtagagcaagtttcatcgaaagtat |
585 |
Q |
| |
|
|||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||||| | | ||| |||||| | |||||||||| |||||||| |
|
|
| T |
8373768 |
tatggggaatgggtggatccgggaaaactaccttggccaaagctatctacaatcgaatccatcgtgaattccagggtaaaacaagtttcattgaaagtat |
8373669 |
T |
|
| Q |
586 |
tcgagaagtttgtgataataataatagaggggttattcctttacaacaacaacttcttttagatctcttgaaaataaaacaagagattcatagcattgcc |
685 |
Q |
| |
|
|||||||||||||||| |||||| | |||| |||||| |||||| |||||||||||| ||||||| | |||| |||| | |||| ||||||||||| |
|
|
| T |
8373668 |
tcgagaagtttgtgattataatagaaaagggattattcatttacaggaacaacttctttcagatctcctaaaaacaaaagataagatacatagcattgca |
8373569 |
T |
|
| Q |
686 |
tcagggataactaagattgagaaaagacttcgaggacaaacagtttttgtcatacttgatgatgt |
750 |
Q |
| |
|
||||||| |||||| ||||||||||||| ||||||| ||||| || ||||||||||||| |
|
|
| T |
8373568 |
gtggggataaataagatcgagaaaagacttcagggacaaaaggttttaatcgtacttgatgatgt |
8373504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 326 - 537
Target Start/End: Complemental strand, 14769119 - 14768908
Alignment:
| Q |
326 |
aatgaaggtgaactagtgaagcaaattgtcgaggacactttggcaaaactagatatctcattgttgtctattaccgaatatccggttggattggattccc |
425 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||| ||| |||||||||| | ||||| |||||||| |||| | || ||||| ||||| | | |
|
|
| T |
14769119 |
aatgaaggtgaactagtaaagcaaattgtcggtgacgttttcacaaaactagacagttcatttctgtctatttccgagttcccagttgggttggaacctc |
14769020 |
T |
|
| Q |
426 |
gtgtgcaacaaattaccaagtttattgatcatcaatcaacagaagtctgtatgatagggatatggggaatgggtggatccgggaaaacaaccacggccaa |
525 |
Q |
| |
|
|||||||| || | || |||||||||| | || |||| | || |||||||||||||| | ||||||||||||||| || ||||||||||| ||||| |
|
|
| T |
14769019 |
gtgtgcaaaaagtggccgagtttattgaaaaacattcaagcaatgtttgtatgatagggatctagggaatgggtggatctggtaaaacaaccacagccaa |
14768920 |
T |
|
| Q |
526 |
agctatctacaa |
537 |
Q |
| |
|
| | |||||||| |
|
|
| T |
14768919 |
atccatctacaa |
14768908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 444 - 544
Target Start/End: Complemental strand, 32413046 - 32412946
Alignment:
| Q |
444 |
agtttattgatcatcaatcaacagaagtctgtatgatagggatatggggaatgggtggatccgggaaaacaaccacggccaaagctatctacaaccaaat |
543 |
Q |
| |
|
||||||||||| ||||||||| |||| || ||||||||||| ||||||||||| ||||| || ||||||||||| || ||||| ||||| || ||||| |
|
|
| T |
32413046 |
agtttattgatgatcaatcaaataaagtttgcatgatagggatttggggaatggggggatcaggtaaaacaaccacagcaaaagccatctataatcaaat |
32412947 |
T |
|
| Q |
544 |
c |
544 |
Q |
| |
|
| |
|
|
| T |
32412946 |
c |
32412946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 714
Target Start/End: Complemental strand, 31060789 - 31060637
Alignment:
| Q |
562 |
tagagcaagtttcatcgaaagtattcgagaagtttgtgataataataatagaggggttattcctttacaacaacaacttcttttagatctcttgaaaata |
661 |
Q |
| |
|
|||| |||||||||| |||||||||||| |||||| ||||||||| || |||| |||||| ||||||| |||| |||||| ||||| | |||||| |
|
|
| T |
31060789 |
tagaacaagtttcattgaaagtattcgataagtttttgataataactgtaaagggattattcaattacaactacaaattctttcagatccactaaaaata |
31060690 |
T |
|
| Q |
662 |
aaacaagagattcatagcattgcctcagggataactaagattgagaaaagact |
714 |
Q |
| |
|
|| | |||| |||||||||| | || ||||||||||| ||||||||||| |
|
|
| T |
31060689 |
aaggacaagatacatagcattggatggggtataactaagatcgagaaaagact |
31060637 |
T |
|
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