View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17873_low_43 (Length: 206)
Name: NF17873_low_43
Description: NF17873
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17873_low_43 |
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Alignment Details
Target: chr5 (Bit Score: 168; Significance: 3e-90; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 15 - 190
Target Start/End: Original strand, 29768771 - 29768946
Alignment:
| Q |
15 |
ataggacaaagccatctcaattaattcccatgcacaacagagtcacccacacaaacttggaaaaacaagtgacagcttcttttcttttcccaaaaccata |
114 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29768771 |
ataggacaaagccatctcaattaattcccatgcacaacagagtcacccacacaaacttggaaaaacaagtgacagcttcttttcttttcccaaaaccata |
29768870 |
T |
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| Q |
115 |
accaacttcaccgagaaatacggagggcatttccgtcatctcacaccaccctccaccgttcattccatcagaagca |
190 |
Q |
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|||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
29768871 |
accaacttcaccgagaaacacggagggcatttccgtcatctcataccaccctccaccgttcattccatcagaagca |
29768946 |
T |
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