View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF17878_low_32 (Length: 246)

Name: NF17878_low_32
Description: NF17878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF17878_low_32
NF17878_low_32
[»] chr8 (36 HSPs)
chr8 (21-236)||(3465260-3465482)
chr8 (25-81)||(3467604-3467660)
chr8 (25-81)||(36121527-36121583)
chr8 (25-82)||(44926911-44926968)
chr8 (25-81)||(3097188-3097244)
chr8 (25-81)||(22936775-22936831)
chr8 (25-81)||(25697942-25697998)
chr8 (28-81)||(27649819-27649872)
chr8 (25-81)||(26243195-26243251)
chr8 (25-81)||(30759287-30759343)
chr8 (25-81)||(36114023-36114079)
chr8 (25-81)||(38114515-38114571)
chr8 (25-79)||(440173-440227)
chr8 (25-79)||(8125041-8125095)
chr8 (25-82)||(4941762-4941819)
chr8 (28-81)||(30085621-30085674)
chr8 (25-81)||(24897570-24897626)
chr8 (25-81)||(25497762-25497818)
chr8 (39-79)||(29023308-29023348)
chr8 (25-81)||(40742277-40742333)
chr8 (25-81)||(41289040-41289096)
chr8 (25-79)||(28425456-28425510)
chr8 (25-66)||(40742195-40742236)
chr8 (25-81)||(15206767-15206823)
chr8 (40-80)||(33627017-33627057)
chr8 (25-81)||(35615780-35615836)
chr8 (25-81)||(38152157-38152212)
chr8 (25-81)||(42143346-42143402)
chr8 (145-176)||(39118040-39118071)
chr8 (25-79)||(3619053-3619107)
chr8 (25-79)||(6399092-6399146)
chr8 (39-81)||(26125842-26125884)
chr8 (39-81)||(44926940-44926982)
chr8 (42-79)||(8130088-8130125)
chr8 (41-82)||(26575890-26575931)
chr8 (53-81)||(26125826-26125854)
[»] chr6 (16 HSPs)
chr6 (21-83)||(15151485-15151547)
chr6 (25-81)||(13739268-13739324)
chr6 (25-81)||(13744768-13744824)
chr6 (25-81)||(17829980-17830036)
chr6 (25-81)||(33898987-33899043)
chr6 (25-79)||(6208047-6208101)
chr6 (25-81)||(10826154-10826210)
chr6 (37-81)||(29399775-29399819)
chr6 (25-81)||(32599444-32599500)
chr6 (25-80)||(699620-699674)
chr6 (25-79)||(1312423-1312477)
chr6 (25-79)||(21254863-21254917)
chr6 (25-79)||(29409235-29409289)
chr6 (25-81)||(5584031-5584087)
chr6 (28-79)||(16121985-16122036)
chr6 (25-79)||(31132526-31132580)
[»] chr5 (35 HSPs)
chr5 (21-83)||(35847867-35847929)
chr5 (25-81)||(8049030-8049086)
chr5 (25-81)||(39987946-39988002)
chr5 (24-79)||(7715016-7715071)
chr5 (24-81)||(32030790-32030847)
chr5 (24-81)||(40791049-40791106)
chr5 (24-81)||(42146383-42146440)
chr5 (25-81)||(13253062-13253118)
chr5 (25-81)||(22482266-22482322)
chr5 (25-81)||(41834969-41835025)
chr5 (26-81)||(24045908-24045963)
chr5 (25-81)||(32454613-32454670)
chr5 (25-81)||(2430276-2430332)
chr5 (25-81)||(3060203-3060259)
chr5 (25-81)||(3667931-3667987)
chr5 (25-81)||(5710365-5710421)
chr5 (25-81)||(10058151-10058207)
chr5 (25-81)||(35760266-35760322)
chr5 (25-81)||(40495337-40495393)
chr5 (25-81)||(41740572-41740628)
chr5 (24-79)||(9275465-9275520)
chr5 (25-81)||(2694739-2694795)
chr5 (29-81)||(7385911-7385963)
chr5 (24-79)||(34106928-34106983)
chr5 (39-81)||(4292240-4292282)
chr5 (24-82)||(27021204-27021262)
chr5 (25-79)||(33953883-33953937)
chr5 (25-79)||(40885288-40885342)
chr5 (28-80)||(16843609-16843661)
chr5 (145-176)||(4852152-4852183)
chr5 (25-79)||(7178854-7178908)
chr5 (25-79)||(16158446-16158500)
chr5 (25-79)||(19784890-19784944)
chr5 (42-79)||(23914235-23914272)
chr5 (41-82)||(33082341-33082382)
[»] chr1 (33 HSPs)
chr1 (21-83)||(29441267-29441329)
chr1 (25-81)||(6166196-6166252)
chr1 (25-81)||(42850202-42850258)
chr1 (25-79)||(11023315-11023369)
chr1 (25-79)||(45710135-45710189)
chr1 (25-81)||(1199914-1199970)
chr1 (25-81)||(10470676-10470732)
chr1 (25-81)||(20800260-20800316)
chr1 (25-81)||(31223461-31223517)
chr1 (25-81)||(35569185-35569241)
chr1 (25-81)||(43728861-43728917)
chr1 (24-79)||(47123472-47123527)
chr1 (25-81)||(6464694-6464750)
chr1 (27-79)||(7826339-7826391)
chr1 (25-81)||(15884314-15884370)
chr1 (25-81)||(25230093-25230149)
chr1 (25-81)||(48510995-48511051)
chr1 (25-81)||(50977323-50977379)
chr1 (25-79)||(13056084-13056138)
chr1 (25-79)||(34718538-34718592)
chr1 (24-81)||(27801635-27801692)
chr1 (25-81)||(40352478-40352533)
chr1 (25-81)||(43134537-43134593)
chr1 (25-81)||(49242965-49243021)
chr1 (25-79)||(12247506-12247560)
chr1 (25-79)||(40229455-40229509)
chr1 (28-81)||(26058331-26058384)
chr1 (24-81)||(50406216-50406273)
chr1 (25-81)||(5410726-5410782)
chr1 (25-81)||(12468299-12468354)
chr1 (145-176)||(47142792-47142823)
chr1 (25-79)||(25061313-25061367)
chr1 (24-81)||(36205277-36205334)
[»] chr2 (37 HSPs)
chr2 (21-80)||(23267345-23267404)
chr2 (25-81)||(1945019-1945075)
chr2 (25-81)||(2213719-2213775)
chr2 (25-81)||(7472654-7472710)
chr2 (25-81)||(44619041-44619097)
chr2 (25-79)||(32502057-32502111)
chr2 (25-81)||(2215324-2215380)
chr2 (25-81)||(9988481-9988537)
chr2 (25-81)||(30007533-30007589)
chr2 (25-80)||(41580691-41580746)
chr2 (25-79)||(14821234-14821288)
chr2 (28-81)||(31562667-31562720)
chr2 (26-79)||(36548272-36548325)
chr2 (25-81)||(2213578-2213634)
chr2 (25-81)||(5916222-5916278)
chr2 (25-81)||(8170384-8170440)
chr2 (25-81)||(34433286-34433342)
chr2 (25-81)||(36312348-36312404)
chr2 (25-81)||(39141450-39141506)
chr2 (25-79)||(25747864-25747918)
chr2 (25-79)||(31224752-31224806)
chr2 (25-79)||(42515958-42516012)
chr2 (25-81)||(28127267-28127323)
chr2 (25-81)||(45714648-45714704)
chr2 (25-80)||(38600424-38600479)
chr2 (25-79)||(7295330-7295384)
chr2 (25-79)||(7296227-7296281)
chr2 (24-82)||(16467157-16467215)
chr2 (149-209)||(6742881-6742941)
chr2 (25-81)||(23358330-23358385)
chr2 (25-81)||(28261366-28261422)
chr2 (25-79)||(26207911-26207965)
chr2 (25-79)||(42089510-42089564)
chr2 (25-79)||(43858194-43858248)
chr2 (39-72)||(8041364-8041397)
chr2 (28-81)||(18511177-18511230)
chr2 (25-81)||(3853972-3854028)
[»] chr3 (34 HSPs)
chr3 (21-79)||(52813274-52813332)
chr3 (25-81)||(3348306-3348362)
chr3 (25-81)||(10853249-10853305)
chr3 (25-81)||(23496380-23496436)
chr3 (25-81)||(50664821-50664877)
chr3 (25-79)||(42318392-42318446)
chr3 (25-81)||(10334201-10334257)
chr3 (25-81)||(35425396-35425452)
chr3 (25-81)||(55154564-55154620)
chr3 (26-81)||(38172289-38172344)
chr3 (25-79)||(8424714-8424768)
chr3 (25-79)||(44939400-44939454)
chr3 (25-79)||(48189426-48189480)
chr3 (25-79)||(53074965-53075019)
chr3 (24-81)||(42475771-42475828)
chr3 (25-81)||(26519727-26519783)
chr3 (25-81)||(35930801-35930857)
chr3 (29-81)||(38125424-38125476)
chr3 (28-79)||(52966793-52966844)
chr3 (25-79)||(19877480-19877534)
chr3 (24-81)||(4984643-4984700)
chr3 (25-81)||(21225053-21225109)
chr3 (25-81)||(30811514-30811570)
chr3 (25-81)||(38340868-38340924)
chr3 (24-75)||(29716674-29716725)
chr3 (25-79)||(15511360-15511414)
chr3 (25-79)||(34561171-34561225)
chr3 (25-81)||(20813209-20813264)
chr3 (25-81)||(40415278-40415334)
chr3 (24-81)||(16246078-16246133)
chr3 (52-81)||(35930878-35930907)
chr3 (149-209)||(26716375-26716435)
chr3 (53-81)||(31618394-31618422)
chr3 (25-81)||(44224825-44224881)
[»] chr4 (50 HSPs)
chr4 (21-83)||(4649909-4649971)
chr4 (25-79)||(32238043-32238097)
chr4 (25-81)||(16566353-16566409)
chr4 (25-81)||(43781501-43781557)
chr4 (25-81)||(46830051-46830107)
chr4 (25-81)||(48407680-48407736)
chr4 (25-79)||(28987066-28987120)
chr4 (25-79)||(43772107-43772161)
chr4 (24-81)||(9889317-9889374)
chr4 (24-81)||(25312762-25312819)
chr4 (24-81)||(26426097-26426154)
chr4 (24-81)||(54150573-54150630)
chr4 (24-81)||(55638737-55638794)
chr4 (25-81)||(14072550-14072606)
chr4 (25-81)||(14564128-14564184)
chr4 (25-81)||(19592213-19592269)
chr4 (25-81)||(26651830-26651886)
chr4 (25-81)||(30842179-30842235)
chr4 (25-81)||(39636833-39636889)
chr4 (25-81)||(49519778-49519834)
chr4 (25-81)||(51922988-51923044)
chr4 (30-81)||(39187787-39187838)
chr4 (25-79)||(13167573-13167627)
chr4 (25-79)||(54153092-54153146)
chr4 (25-81)||(6138602-6138658)
chr4 (25-81)||(14076063-14076118)
chr4 (25-81)||(29149289-29149345)
chr4 (25-81)||(42944880-42944936)
chr4 (24-79)||(46926095-46926150)
chr4 (25-79)||(6505249-6505303)
chr4 (35-81)||(54735633-54735679)
chr4 (24-81)||(9893758-9893815)
chr4 (24-81)||(48550264-48550321)
chr4 (25-81)||(15603408-15603464)
chr4 (25-73)||(33574226-33574274)
chr4 (25-79)||(41866202-41866256)
chr4 (25-79)||(48908321-48908375)
chr4 (145-202)||(38836849-38836906)
chr4 (25-81)||(45779992-45780047)
chr4 (25-81)||(53532025-53532081)
chr4 (25-72)||(19599487-19599534)
chr4 (145-176)||(45421710-45421741)
chr4 (25-79)||(49136570-49136624)
chr4 (25-66)||(15619662-15619703)
chr4 (41-82)||(16202531-16202572)
chr4 (25-81)||(22694579-22694635)
chr4 (145-174)||(47739042-47739071)
chr4 (42-79)||(54683453-54683490)
chr4 (35-79)||(13183034-13183078)
chr4 (25-81)||(31520353-31520409)
[»] chr7 (37 HSPs)
chr7 (29-83)||(12212436-12212490)
chr7 (25-79)||(46541684-46541738)
chr7 (25-81)||(3622429-3622485)
chr7 (25-81)||(10371927-10371983)
chr7 (25-81)||(48459794-48459850)
chr7 (24-79)||(43631667-43631722)
chr7 (28-81)||(37639517-37639570)
chr7 (25-81)||(3375574-3375630)
chr7 (25-81)||(34010423-34010479)
chr7 (25-81)||(44967368-44967424)
chr7 (25-79)||(47022003-47022057)
chr7 (25-79)||(47217512-47217566)
chr7 (25-81)||(3342874-3342930)
chr7 (25-81)||(9456188-9456244)
chr7 (25-81)||(37562654-37562710)
chr7 (25-81)||(38230152-38230208)
chr7 (25-79)||(12964682-12964736)
chr7 (25-79)||(34010932-34010985)
chr7 (24-81)||(12632052-12632109)
chr7 (24-81)||(36920147-36920204)
chr7 (24-81)||(41715740-41715797)
chr7 (25-81)||(3750770-3750826)
chr7 (25-81)||(24770880-24770936)
chr7 (27-81)||(19097483-19097537)
chr7 (29-79)||(48134667-48134717)
chr7 (30-79)||(386452-386501)
chr7 (24-81)||(32187023-32187080)
chr7 (39-82)||(25472149-25472192)
chr7 (25-79)||(39391108-39391162)
chr7 (25-79)||(39977636-39977690)
chr7 (24-74)||(42904636-42904686)
chr7 (25-81)||(20088953-20089009)
chr7 (41-82)||(25472164-25472205)
chr7 (25-82)||(34365950-34366007)
chr7 (25-70)||(42740476-42740521)
chr7 (145-206)||(47300336-47300397)
chr7 (25-81)||(39634134-39634190)
[»] scaffold0381 (1 HSPs)
scaffold0381 (24-81)||(9172-9229)
[»] scaffold0394 (1 HSPs)
scaffold0394 (25-81)||(5812-5868)
[»] scaffold0005 (1 HSPs)
scaffold0005 (25-81)||(253191-253247)
[»] scaffold0369 (1 HSPs)
scaffold0369 (25-79)||(8512-8566)
[»] scaffold0007 (1 HSPs)
scaffold0007 (25-79)||(29107-29161)
[»] scaffold0217 (1 HSPs)
scaffold0217 (36-79)||(2011-2054)
[»] scaffold0983 (1 HSPs)
scaffold0983 (25-79)||(2252-2306)
[»] scaffold0014 (1 HSPs)
scaffold0014 (25-80)||(118393-118448)
[»] scaffold0068 (1 HSPs)
scaffold0068 (41-82)||(38372-38413)


Alignment Details
Target: chr8 (Bit Score: 141; Significance: 5e-74; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 21 - 236
Target Start/End: Complemental strand, 3465482 - 3465260
Alignment:
Q  21 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctac---------aaccaaacacacaattagtattttacta 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||| ||||||||||||||    
T  3465482 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctactcaccgcagaaccaaacacacacttagtattttacta 3465383  T
Q  112 ctaatttcnnnnnnnngtcaaacatacaaaataataacatttcattaatcaaaatgtgttcaatataatatattatcttaatcaaaatctaaaaactaac 211  Q
    ||| |||         |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  3465382 ctagttt--tttttttgtcaaacatacaaaataataacatttcattaatcaaaacgtgttcaatataatatattatcttaatcaaaatctaaaaactaac 3465285  T
Q  212 taacagtgcgaccgcctttgctact 236  Q
    ||||| ||| |||||||||||||||    
T  3465284 taacactgccaccgcctttgctact 3465260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 3467604 - 3467660
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  3467604 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 3467660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 36121583 - 36121527
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  36121583 aactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattct 36121527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 25 - 82
Target Start/End: Original strand, 44926911 - 44926968
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||    
T  44926911 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaactcaattcta 44926968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 3097244 - 3097188
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  3097244 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaattaattct 3097188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 22936831 - 22936775
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  22936831 aactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattct 22936775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 25697998 - 25697942
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  25697998 aactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattct 25697942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 27649819 - 27649872
Alignment:
Q  28 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  27649819 tcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattct 27649872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 26243195 - 26243251
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| ||||||||||| || |||||||||||||||||||||||||||    
T  26243195 aactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaattct 26243251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 30759343 - 30759287
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||| ||||||||||||    
T  30759343 aactcacttttaaccaaaatcaattctctcaaactcaattatattaaaatcaattct 30759287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 36114079 - 36114023
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||| |||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  36114079 aacttacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 36114023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 38114515 - 38114571
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  38114515 aacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaataaattct 38114571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 440227 - 440173
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||| | |||||||||||||||| |||| |||||||||||||||||||||||    
T  440227 aactcacatttaaccaaaatcaattctctcagactcaattctatcaaaatcaatt 440173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 8125041 - 8125095
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||||||||||||||||||| ||||||||| |||| | |||||||||||    
T  8125041 aactcacttctaaccaaaatcaattctctcaaactcgattcaaccaaaatcaatt 8125095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 4941819 - 4941762
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||||| |||||||||||    
T  4941819 aactcacttttaatcaaaatcaattctctcaaactcaattatatcagaatcaattcta 4941762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 30085674 - 30085621
Alignment:
Q  28 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||| |||||||||||||||| || |||||||||| ||||||||||||||||    
T  30085674 tcacttttaaccaaaatcaattctcttaaactcaattatatcaaaatcaattct 30085621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 24897626 - 24897570
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |  |||||||||| ||||||||||||||||    
T  24897626 aactcacttttaaccaaaatcaattctcataaactcaattttatcaaaatcaattct 24897570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 25497762 - 25497818
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |  |||||||||| ||||||||||||||||    
T  25497762 aactcacttttaaccaaaatcaattctcctaaactcaattttatcaaaatcaattct 25497818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 29023308 - 29023348
Alignment:
Q  39 caaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  29023308 caaaatcaattctctcaaactcaattctatcaaaatcaatt 29023348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 40742333 - 40742277
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| |||||||||||  | |||||||||||||||||||||||||||    
T  40742333 aactcacttttaacgaaaatcaattcttttaaactcaattctatcaaaatcaattct 40742277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 41289096 - 41289040
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||  ||||||||||| ||||||||||||||| ||||||||||||||    
T  41289096 aactcacttttaattaaaatcaattctctcaaactcaattctgtcaaaatcaattct 41289040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 28425510 - 28425456
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||||||||||||||||   |||| |||||||||||||||||||||    
T  28425510 aactcacttttaaccaaaatcaattctaacaaaatcaattctatcaaaatcaatt 28425456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 40742195 - 40742236
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattct 66  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  40742195 aactcacttttaaccaaaatcaattctctcaaactcaattct 40742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 15206767 - 15206823
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| || ||||||||||||   |||||||||||||||||||||| ||||||    
T  15206767 aactcacttttacccaaaatcaattttgtcaaactcaattctatcaaaattaattct 15206823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 80
Target Start/End: Complemental strand, 33627057 - 33627017
Alignment:
Q  40 aaaatcaattcactcaaactcaattctatcaaaatcaattc 80  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  33627057 aaaatcaattctttcaaactcaattctatcaaaatcaattc 33627017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 35615780 - 35615836
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||||  |||||||||||    |||||||||||||||||||||||||||||    
T  35615780 aactcacttctttccaaaatcaatcttgtcaaactcaattctatcaaaatcaattct 35615836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 38152212 - 38152157
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| ||||||||||  |||||||| |||||||||||||||||||||    
T  38152212 aactcactt-taactaaaatcaattttctcaaacttaattctatcaaaatcaattct 38152157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 42143402 - 42143346
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| ||||||||||  ||||||||||||| ||||| ||||||||||    
T  42143402 aactcacttttaactaaaatcaattttctcaaactcaattatatcataatcaattct 42143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 39118040 - 39118071
Alignment:
Q  145 ataacatttcattaatcaaaatgtgttcaata 176  Q
    ||||||||||||||||||||||||||||||||    
T  39118040 ataacatttcattaatcaaaatgtgttcaata 39118071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 3619107 - 3619053
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| | | || |||||||||| ||||| |||||||||||||||||||||    
T  3619107 aactcacttttgatcagaatcaattcattcaaaatcaattctatcaaaatcaatt 3619053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 6399146 - 6399092
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||| |||||||||  ||||||||||||||| || ||||||||    
T  6399146 aactcacttttaaccataatcaattctatcaaactcaattctaccagaatcaatt 6399092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 26125842 - 26125884
Alignment:
Q  39 caaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||||| || |||||||||||||||||||| ||||||    
T  26125842 caaaatcaattctcttaaactcaattctatcaaaattaattct 26125884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 44926940 - 44926982
Alignment:
Q  39 caaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||| |||||||  |||||||||||||||||||||||||||||    
T  44926940 caaactcaattctatcaaactcaattctatcaaaatcaattct 44926982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 8130125 - 8130088
Alignment:
Q  42 aatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  8130125 aatcaattcattcaaaatcaattctatcaaaatcaatt 8130088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 26575890 - 26575931
Alignment:
Q  41 aaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    |||||||||| |||||| |||||||||||| |||||||||||    
T  26575890 aaatcaattctctcaaaatcaattctatcagaatcaattcta 26575931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 81
Target Start/End: Original strand, 26125826 - 26125854
Alignment:
Q  53 tcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||||||||||||||||||||||    
T  26125826 tcaaactcaattctatcaaaatcaattct 26125854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 15151547 - 15151485
Alignment:
Q  21 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctac 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15151547 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctac 15151485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 13739268 - 13739324
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  13739268 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 13739324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 13744768 - 13744824
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  13744768 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 13744824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 17830036 - 17829980
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  17830036 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 17829980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 33899043 - 33898987
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  33899043 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 33898987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 6208101 - 6208047
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||    
T  6208101 aactcacttttaatcaaaatcaattcactcaaaatcaattctatcaaaatcaatt 6208047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 10826154 - 10826210
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  10826154 aactcacttttaaccaaaatcaattctctcaaactcaattttatcaaaattaattct 10826210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 37 - 81
Target Start/End: Complemental strand, 29399819 - 29399775
Alignment:
Q  37 accaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||||||||  |||||||||||||||||||||||||||||    
T  29399819 accaaaatcaattctatcaaactcaattctatcaaaatcaattct 29399775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 32599500 - 32599444
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| || ||| |||||||||||||||||||||||    
T  32599500 aactcacttttaatcaaaatcaattctcttaaattcaattctatcaaaatcaattct 32599444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 699620 - 699674
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 80  Q
    ||||||||| |||| |||||||||||  ||||||||||||||||||||||||||||    
T  699620 aactcactt-taactaaaatcaattctttcaaactcaattctatcaaaatcaattc 699674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 1312477 - 1312423
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||   |||||||| ||||||||||||||||||    
T  1312477 aactcacttttaaccaaaatcaattttatcaaactcgattctatcaaaatcaatt 1312423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 21254917 - 21254863
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| |||| ||||||| ||||||||||||||||||||| ||||||    
T  21254917 aactcacttttaatcaaattcaattctctcaaactcaattctatcaaactcaatt 21254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 29409289 - 29409235
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| ||||||||||||  |||||||||||||||| ||||||||||    
T  29409289 aactcacttttaatcaaaatcaattctttcaaactcaattctattaaaatcaatt 29409235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 5584087 - 5584031
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||  ||||||||||||  ||||| |||||||||||||||||||||||    
T  5584087 aactcacttttagtcaaaatcaattctgtcaaaatcaattctatcaaaatcaattct 5584031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 16122036 - 16121985
Alignment:
Q  28 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||| ||||||||||||||||  ||||| |||||| ||||||||||||||    
T  16122036 tcacttttaaccaaaatcaattctatcaaaatcaattttatcaaaatcaatt 16121985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 31132526 - 31132580
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||| || || ||||||| ||||  ||||||||||||||||||||||||||||    
T  31132526 aactcatttttagccaaaataaattatctcaaactcaattctatcaaaatcaatt 31132580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 35847929 - 35847867
Alignment:
Q  21 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctac 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35847929 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctac 35847867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 8049086 - 8049030
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  8049086 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 8049030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 39988002 - 39987946
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  39988002 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 39987946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 7715016 - 7715071
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  7715016 taactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 7715071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 32030790 - 32030847
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  32030790 taacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 32030847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 40791106 - 40791049
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  40791106 taactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattct 40791049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 42146383 - 42146440
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  42146383 taactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattct 42146440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 13253118 - 13253062
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  13253118 aactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattct 13253062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 22482266 - 22482322
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  22482266 aactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattct 22482322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 41834969 - 41835025
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  41834969 aactcacttttaaccaaaatcaattctctcaaactgaattctatcaaaatcaattct 41835025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Original strand, 24045908 - 24045963
Alignment:
Q  26 actcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  24045908 actcacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattct 24045963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 32454613 - 32454670
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattct-atcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  32454613 aactcacttttaaccaaaatcaattctctcaaactcaattctaatcaaaatcaattct 32454670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 2430332 - 2430276
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||||||||||| |||||||| ||||||    
T  2430332 aactcacttttaaccaaaatcaattctctcaaactcaattccatcaaaatgaattct 2430276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 3060259 - 3060203
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| |||||||| |||||||||||||||||||||    
T  3060259 aactcacttttaatcaaaatcaattctctcaaacttaattctatcaaaatcaattct 3060203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 3667931 - 3667987
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| | | |||||||||||| ||||||||||||||||||||||||||||||    
T  3667931 aactcactttttaacaaaatcaattctctcaaactcaattctatcaaaatcaattct 3667987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 5710421 - 5710365
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||    
T  5710421 aactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattct 5710365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 10058151 - 10058207
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||| | ||||||||||||| ||||||||||||||||    
T  10058151 aactcacttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaattct 10058207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 35760266 - 35760322
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| | | |||||||||||| ||||||||||||||||||||||||||||||    
T  35760266 aactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattct 35760322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 40495393 - 40495337
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||   |||||||||||||||||||||||||||||    
T  40495393 aactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaattct 40495337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 41740628 - 41740572
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||| | ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  41740628 aactcacctataatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 41740572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 9275520 - 9275465
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||| |||||||||||||||| || |||||||||| ||||||||||||||    
T  9275520 taactcacttttaaccaaaatcaattctcttaaactcaattttatcaaaatcaatt 9275465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 2694795 - 2694739
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||||||    
T  2694795 aactcacttttaaccaaaatcaattcaatcaaaatcaattctgacaaaatcaattct 2694739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 7385963 - 7385911
Alignment:
Q  29 cacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||| |||||||||||||||| || ||||| |||||||||||||||||||||    
T  7385963 cacttttaaccaaaatcaattctctaaaacttaattctatcaaaatcaattct 7385911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 34106983 - 34106928
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||| ||||||||| ||||||  | |||||||||||||||||||||||||    
T  34106983 taactcacttttaaccaaaaacaattcttttaaactcaattctatcaaaatcaatt 34106928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 39 - 81
Target Start/End: Original strand, 4292240 - 4292282
Alignment:
Q  39 caaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||||| |||||||| |||||||||||||||||||||    
T  4292240 caaaatcaattctctcaaacttaattctatcaaaatcaattct 4292282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 27021204 - 27021262
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    ||||||| || |||||||||||||||  ||||||||||||| ||||||||||| |||||    
T  27021204 taactcatttttaaccaaaatcaattttctcaaactcaattatatcaaaatcagttcta 27021262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 33953937 - 33953883
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||  ||||||||||| |||||||||||||||| |||||||||||    
T  33953937 aactcacttttaaataaaatcaattctctcaaactcaattctaccaaaatcaatt 33953883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 40885288 - 40885342
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| |||||||||||| || ||||||||||||| |||||||||||    
T  40885288 aactcacttttaatcaaaatcaattctcttaaactcaattctaacaaaatcaatt 40885342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 80
Target Start/End: Original strand, 16843609 - 16843661
Alignment:
Q  28 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 80  Q
    |||||| ||||||||||| ||||  |||||||||||| |||||||||||||||    
T  16843609 tcacttttaaccaaaatctattcgttcaaactcaattatatcaaaatcaattc 16843661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 176
Target Start/End: Original strand, 4852152 - 4852183
Alignment:
Q  145 ataacatttcattaatcaaaatgtgttcaata 176  Q
    ||||||||||||||||||||||||||||||||    
T  4852152 ataacatttcattaatcaaaatgtgttcaata 4852183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 7178854 - 7178908
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||  |||||| ||||| ||||||||||||||||||||| ||||||    
T  7178854 aactcacttttagtcaaaattaattctctcaaactcaattctatcaaactcaatt 7178908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 16158500 - 16158446
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| ||||||||||||  |||||||||| ||||| ||||||||||    
T  16158500 aactcacttttaatcaaaatcaattctttcaaactcaaatctataaaaatcaatt 16158446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 19784890 - 19784944
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||||   ||| ||||||| |||||||||||||    
T  19784890 aactcacttttaaccaaaatcaattcaaataaaatcaattcaatcaaaatcaatt 19784944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 23914272 - 23914235
Alignment:
Q  42 aatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  23914272 aatcaattctctcaaaatcaattctatcaaaatcaatt 23914235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 33082382 - 33082341
Alignment:
Q  41 aaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    |||||||||| |||||| |||||||||||| |||||||||||    
T  33082382 aaatcaattctctcaaaatcaattctatcagaatcaattcta 33082341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 83
Target Start/End: Original strand, 29441267 - 29441329
Alignment:
Q  21 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctac 83  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29441267 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctac 29441329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 6166196 - 6166252
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  6166196 aactcacttctaaccaaaatcaattctctcaaattcaattctatcaaaatcaattct 6166252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 42850258 - 42850202
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  42850258 aactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattct 42850202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 11023369 - 11023315
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  11023369 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 11023315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 45710135 - 45710189
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  45710135 aactcacttttaatcaaaatcaattcactcaaactcaattctatcaaaatcaatt 45710189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 1199914 - 1199970
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  1199914 aactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 1199970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 10470676 - 10470732
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  10470676 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 10470732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 20800316 - 20800260
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  20800316 aactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattct 20800260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 31223461 - 31223517
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  31223461 aactcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattct 31223517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 35569241 - 35569185
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  35569241 aactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaattct 35569185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 43728917 - 43728861
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  43728917 aactcacttttaagcaaaatcaattctctcaaactcaattctatcaaaatcaattct 43728861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 47123472 - 47123527
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  47123472 taactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 47123527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 6464694 - 6464750
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||| || |||||||||||||||| ||||||||||||||||    
T  6464694 aactcacttttaaccaaaatgaactcactcaaactcaattatatcaaaatcaattct 6464750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 7826391 - 7826339
Alignment:
Q  27 ctcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  7826391 ctcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaatt 7826339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 15884314 - 15884370
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||  |||||||||| ||||||||||||||||||    
T  15884314 aactcacttttaaccaaaatcaattctgtcaaactcaactctatcaaaatcaattct 15884370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 25230093 - 25230149
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| ||||||||||| |||||||||| |||||||||||||||||||    
T  25230093 aactcacttttaactaaaatcaattctctcaaactcagttctatcaaaatcaattct 25230149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 48510995 - 48511051
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||  |||||||||||||| |||||||||||||||    
T  48510995 aactcacttttaaccaaaatcaattatctcaaactcaattcaatcaaaatcaattct 48511051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 50977379 - 50977323
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||||    
T  50977379 aactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaattct 50977323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 13056084 - 13056138
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||||||||||||||||  |||||||| ||||||||||||||||||    
T  13056084 aactcacttttaaccaaaatcaattctttcaaactccattctatcaaaatcaatt 13056138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 34718538 - 34718592
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||| ||||  ||||||||||||||||||||||||||||    
T  34718538 aactcacttttaaccaaaattaattatctcaaactcaattctatcaaaatcaatt 34718592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 27801692 - 27801635
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| |||||||||||| || ||| |||||||||||||||||||||||    
T  27801692 taactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattct 27801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 40352478 - 40352533
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| | |||| |||||||||||||||||||||||    
T  40352478 aactcacttttaaccaaaatcaattc-cacaaaatcaattctatcaaaatcaattct 40352533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 43134537 - 43134593
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| || ||||||||||||||| |||| ||||||    
T  43134537 aactcacttttaaccaaaatcaattctcttaaactcaattctatccaaataaattct 43134593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 49243021 - 49242965
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||| || |||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  49243021 aactcatttttaaccaaaatcaattctctcaaactcaattatatcaaaattaattct 49242965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 12247506 - 12247560
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||| ||||||||| || |||||||||||||| ||||||||||    
T  12247506 aactcacttttaaccagaatcaattctcttaaactcaattctattaaaatcaatt 12247560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 40229509 - 40229455
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||||||||||||||||   |||| |||||||||||||||||||||    
T  40229509 aactcacttttaaccaaaatcaattccaacaaaatcaattctatcaaaatcaatt 40229455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 26058331 - 26058384
Alignment:
Q  28 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||| ||| |||||||||||| || ||| |||||||||||||||||||||||    
T  26058331 tcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattct 26058384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 50406216 - 50406273
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| ||||||||| ||  |||||||||||| ||||||||||||||||    
T  50406216 taactcacttttaatcaaaatcaaatctttcaaactcaattttatcaaaatcaattct 50406273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 5410726 - 5410782
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| ||||||||||||  ||||| |||||| ||||||||||||||||    
T  5410726 aactcacttttaatcaaaatcaattctttcaaattcaattatatcaaaatcaattct 5410782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 12468299 - 12468354
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||   ||||||||||||||||| |||||||||||    
T  12468299 aactcacttttaaccaaaatcaattatatcaaactcaattctatc-aaatcaattct 12468354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 47142823 - 47142792
Alignment:
Q  145 ataacatttcattaatcaaaatgtgttcaata 176  Q
    ||||||||||||||||||||||||||||||||    
T  47142823 ataacatttcattaatcaaaatgtgttcaata 47142792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 25061313 - 25061367
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||||  |||| |||||| || |||||||||||    
T  25061313 aactcacttttaaccaaaatcaattcaaccaaaatcaattttaacaaaatcaatt 25061367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 36205277 - 36205334
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||| ||||| ||| |||||||||||| ||||||||||||||  | ||||||||||||    
T  36205277 taacccacttttaatcaaaatcaattctctcaaactcaattccgttaaaatcaattct 36205334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 80
Target Start/End: Complemental strand, 23267404 - 23267345
Alignment:
Q  21 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 80  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23267404 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 23267345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 1945075 - 1945019
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  1945075 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 1945019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 2213719 - 2213775
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  2213719 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 2213775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 7472710 - 7472654
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  7472710 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 7472654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 44619097 - 44619041
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  44619097 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 44619041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 32502057 - 32502111
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  32502057 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 32502111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 2215324 - 2215380
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  2215324 aactcacttttaaccaaaatcaattctctcaagctcaattctatcaaaatcaattct 2215380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 9988537 - 9988481
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  9988537 aactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattct 9988481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 30007589 - 30007533
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  30007589 aactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 30007533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 41580746 - 41580691
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 80  Q
    ||||||||| |||||||||||||||| |||||||||||||| ||||||||||||||    
T  41580746 aactcacttttaaccaaaatcaattctctcaaactcaattcgatcaaaatcaattc 41580691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 14821234 - 14821288
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||| ||||    
T  14821234 aactcacttttaactaaaatcaattcactcaaactcaattctatcaaaattaatt 14821288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 81
Target Start/End: Complemental strand, 31562720 - 31562667
Alignment:
Q  28 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  31562720 tcacttttaaccaaaatcaattctctcaaactcaattttatcaaaatcaattct 31562667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 36548272 - 36548325
Alignment:
Q  26 actcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  36548272 actcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 36548325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 2213578 - 2213634
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| | | |||||||||||| ||||||||||||||||||||||||||||||    
T  2213578 aactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattct 2213634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 5916278 - 5916222
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||| | |||||||||||||||||||||    
T  5916278 aactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattct 5916222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 8170384 - 8170440
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||| ||||||    
T  8170384 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaattaattct 8170440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 34433342 - 34433286
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| ||||||||||||  |||||||||||||||||||||||||||||    
T  34433342 aactcacttttaatcaaaatcaattctgtcaaactcaattctatcaaaatcaattct 34433286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 36312348 - 36312404
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||| | |||||||||||||||||||||    
T  36312348 aactcacttttaaccaaaatcaattctctcaaaattaattctatcaaaatcaattct 36312404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 39141506 - 39141450
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||  |||||||||||| ||||||||||||||||    
T  39141506 aactcacttttaaccaaaatcaattctttcaaactcaattatatcaaaatcaattct 39141450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 25747918 - 25747864
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||| ||||||    
T  25747918 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaactcaatt 25747864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 31224752 - 31224806
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||||||||||||    
T  31224752 aactcacttttaactaaaatcaattctttcaaactcaattctatcaaaatcaatt 31224806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 42516012 - 42515958
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||    
T  42516012 aactcacttttaactaaaatcaattctctcaaactcaattatatcaaaatcaatt 42515958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 28127323 - 28127267
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| | | |||||||||||| |||||||| |||||||||||||||||||||    
T  28127323 aactcactttttagcaaaatcaattctctcaaactaaattctatcaaaatcaattct 28127267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 45714704 - 45714648
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||| || ||| |||||||||||| ||||||||||||| ||||||||||||||||    
T  45714704 aactcatttttaatcaaaatcaattctctcaaactcaattatatcaaaatcaattct 45714648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 38600479 - 38600424
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 80  Q
    ||||||||| |||||||||||||||| |||||||| ||||| |||||||| |||||    
T  38600479 aactcacttttaaccaaaatcaattctctcaaacttaattcgatcaaaattaattc 38600424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 7295384 - 7295330
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||| || |||||| ||||||||| ||||||||||||||||||||||| ||||    
T  7295384 aactcatttttaaccagaatcaattctctcaaactcaattctatcaaaattaatt 7295330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 7296227 - 7296281
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||| || |||||||||||||||| ||||||||||||| ||||||| ||||||    
T  7296227 aactcatttttaaccaaaatcaattctctcaaactcaattatatcaaagtcaatt 7296281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 82
Target Start/End: Original strand, 16467157 - 16467215
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    |||||||||| |||||||||||||||    |||| ||||||||||||||||||||||||    
T  16467157 taactcacttttaaccaaaatcaattatgccaaaatcaattctatcaaaatcaattcta 16467215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 6742881 - 6742941
Alignment:
Q  149 catttcattaatcaaaatgtgttcaatataatatattatcttaatcaaaatctaaaaacta 209  Q
    |||||||||||| || |||||||||||| ||| || ||| |||| ||||||||||||||||    
T  6742881 catttcattaattaagatgtgttcaatacaatttagtatattaaccaaaatctaaaaacta 6742941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 23358330 - 23358385
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| |||||||||||||||||  |||||||||||    
T  23358330 aactcacttttaatcaaaatcaattctctcaaactcaattctat-taaatcaattct 23358385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 28261366 - 28261422
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||| ||| ||||| ||||||    
T  28261366 aactcacttttaagcaaaatcaattctctcaaactcaattgtattaaaattaattct 28261422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 26207965 - 26207911
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||| |||| ||||||||| |||||| |||||| | |||||||||||||||||||    
T  26207965 aactgacttttaaccaaaaccaattctctcaaaattaattctatcaaaatcaatt 26207911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 42089564 - 42089510
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| |||||||||||| ||  |||| |||||||||||||||||||    
T  42089564 aactcacttttaatcaaaatcaattctcttgaacttaattctatcaaaatcaatt 42089510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 43858248 - 43858194
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |  |||||||||||||| | ||| |||||||||||||||||||||    
T  43858248 aactcacttttgcccaaaatcaattcaattaaaatcaattctatcaaaatcaatt 43858194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 72
Target Start/End: Original strand, 8041364 - 8041397
Alignment:
Q  39 caaaatcaattcactcaaactcaattctatcaaa 72  Q
    |||||||||||| |||||||||||||||||||||    
T  8041364 caaaatcaattctctcaaactcaattctatcaaa 8041397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 18511177 - 18511230
Alignment:
Q  28 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||| |||||||||||||||   ||||| |||||| ||||||||||||||||    
T  18511177 tcacttttaaccaaaatcaattatatcaaaatcaattttatcaaaatcaattct 18511230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 3853972 - 3854028
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| ||||||||||||  ||||| ||||||| |||||| ||||||||    
T  3853972 aactcacttttaatcaaaatcaattctatcaaaatcaattccatcaaactcaattct 3854028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 21 - 79
Target Start/End: Original strand, 52813274 - 52813332
Alignment:
Q  21 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52813274 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 52813332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 3348306 - 3348362
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3348306 aactcacttctaaccaaaatcaattcacttaaactcaattctatcaaaatcaattct 3348362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 10853305 - 10853249
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  10853305 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 10853249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 23496380 - 23496436
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  23496380 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 23496436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 50664821 - 50664877
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  50664821 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 50664877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 42318392 - 42318446
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  42318392 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 42318446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 10334201 - 10334257
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  10334201 aactgacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 10334257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 35425396 - 35425452
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  35425396 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 35425452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 55154564 - 55154620
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  55154564 aactcacttttaactaaaatcaattctctcaaactcaattctatcaaaatcaattct 55154620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 26 - 81
Target Start/End: Complemental strand, 38172344 - 38172289
Alignment:
Q  26 actcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||    
T  38172344 actcacttttaaccaaaatcaattctctcaaactcaattctattaaaatcaattct 38172289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 8424768 - 8424714
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||    
T  8424768 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaattcaatt 8424714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 44939454 - 44939400
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||    
T  44939454 aactcacttttaatcaaaatcaattcactcaaattcaattctatcaaaatcaatt 44939400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 48189480 - 48189426
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  48189480 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 48189426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 53074965 - 53075019
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  53074965 aactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaatt 53075019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 42475771 - 42475828
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||| ||||||||||||    
T  42475771 taactcacttttaatcaaaatcaattctctcaaactcaattctataaaaatcaattct 42475828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 26519727 - 26519783
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| | | |||||||||||| ||||||||||||||||||||||||||||||    
T  26519727 aactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattct 26519783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 35930801 - 35930857
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||  ||||||||||| ||||||||||||||||||||||||||||||    
T  35930801 aactcacttttaataaaaatcaattctctcaaactcaattctatcaaaatcaattct 35930857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 38125476 - 38125424
Alignment:
Q  29 cacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||| |||||||||||||||| |||||| |||||||||||||||||||||||    
T  38125476 cacttttaaccaaaatcaattctctcaaattcaattctatcaaaatcaattct 38125424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 52966844 - 52966793
Alignment:
Q  28 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||| |||||||||||||||| |||||| |||||||||||||||||||||    
T  52966844 tcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaatcaatt 52966793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 19877480 - 19877534
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||| ||||    
T  19877480 aactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaataaatt 19877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 4984643 - 4984700
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| |||||||||||||||  |||||| |||||| ||||||||||||||||    
T  4984643 taactcacttttaaccaaaatcaattttctcaaattcaattatatcaaaatcaattct 4984700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 21225053 - 21225109
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||||||||||||||  | |||||||||    
T  21225053 aactcacttttaaccaaaatcaattctctcaaactcaattctatagagatcaattct 21225109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 30811570 - 30811514
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| |||||| |||||| ||||||||||||||||    
T  30811570 aactcacttttaatcaaaatcaattctctcaaattcaattatatcaaaatcaattct 30811514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 38340868 - 38340924
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||  |||||||  ||||||||||||||||||||    
T  38340868 aactcacttttaaccaaaatcaattctttcaaacttcattctatcaaaatcaattct 38340924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 75
Target Start/End: Complemental strand, 29716725 - 29716674
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatc 75  Q
    |||||||||| |||||||||||||||| |||||| |||||| ||||||||||    
T  29716725 taactcacttttaaccaaaatcaattctctcaaattcaattttatcaaaatc 29716674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 15511414 - 15511360
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||||||||||||||||  ||||||||  |||||||||||||||||    
T  15511414 aactcacttttaaccaaaatcaattctttcaaactccgttctatcaaaatcaatt 15511360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 34561171 - 34561225
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||   ||||||| |||||||||||||||||||    
T  34561171 aactcacttttaaccaaaatcaattttatcaaacttaattctatcaaaatcaatt 34561225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 20813209 - 20813264
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||  |||||| |||||||||| |||||||||||||||||||    
T  20813209 aactcacttttaaccaaacacaattctctcaaactca-ttctatcaaaatcaattct 20813264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 40415334 - 40415278
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| |||||| ||||  | |||||||||||||||||||||||||||    
T  40415334 aactcacttttaactaaaatcgattcctttaaactcaattctatcaaaatcaattct 40415278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 16246133 - 16246078
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| |||| |||||||||||  |||||||||||||||| || |||||||||    
T  16246133 taactcacttttaactaaaatcaattc--tcaaactcaattctattaatatcaattct 16246078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 52 - 81
Target Start/End: Original strand, 35930878 - 35930907
Alignment:
Q  52 ctcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||||||||||||||||||||||||    
T  35930878 ctcaaactcaattctatcaaaatcaattct 35930907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 26716375 - 26716435
Alignment:
Q  149 catttcattaatcaaaatgtgttcaatataatatattatcttaatcaaaatctaaaaacta 209  Q
    ||||||||||||||||||||||| |||||||| |  ||| | || ||||||||| ||||||    
T  26716375 catttcattaatcaaaatgtgtttaatataatttggtatttcaaccaaaatctacaaacta 26716435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 81
Target Start/End: Complemental strand, 31618422 - 31618394
Alignment:
Q  53 tcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||||||||||||||||||||||    
T  31618422 tcaaactcaattctatcaaaatcaattct 31618394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 44224825 - 44224881
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||| ||||||||  |||||||||||||||| |  ||||||||||    
T  44224825 aactcacttttaaccataatcaattatctcaaactcaattctaccggaatcaattct 44224881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 21 - 83
Target Start/End: Complemental strand, 4649971 - 4649909
Alignment:
Q  21 tcataactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctac 83  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  4649971 tcataactcgcttctaaccaaaatcaattcactcaaactcaattttatcaaaatcaattctac 4649909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 32238097 - 32238043
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32238097 aactcacttttaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 32238043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 16566353 - 16566409
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  16566353 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 16566409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 43781557 - 43781501
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  43781557 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 43781501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 46830107 - 46830051
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  46830107 aactcacttttaaccaaaatcaattcacttaaactcaattctatcaaaatcaattct 46830051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 48407736 - 48407680
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  48407736 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 48407680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 28987066 - 28987120
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  28987066 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 28987120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 43772161 - 43772107
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  43772161 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 43772107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 9889374 - 9889317
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9889374 taactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 9889317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 25312762 - 25312819
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  25312762 taactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 25312819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 26426154 - 26426097
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  26426154 taactcacttttaaccaaaatcaattttctcaaactcaattctatcaaaatcaattct 26426097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 54150573 - 54150630
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  54150573 taactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 54150630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 55638794 - 55638737
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||    
T  55638794 taactcacttttaacaaaaatcaattctctcaaactcaattctatcaaaatcaattct 55638737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 14072550 - 14072606
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  14072550 aactcacttttaaacaaaatcaattctctcaaactcaattctatcaaaatcaattct 14072606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 14564184 - 14564128
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  14564184 aactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 14564128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 19592269 - 19592213
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||||||||||    
T  19592269 aactcacttttaaccaaaatcaattctctaaaactcaattctatcaaaatcaattct 19592213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 26651886 - 26651830
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||    
T  26651886 aactcacttttaaccaaaatcaattctctcaaacttaattctatcaaaatcaattct 26651830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 30842179 - 30842235
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  30842179 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 30842235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 39636833 - 39636889
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  39636833 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 39636889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 49519778 - 49519834
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||||| |||||||    
T  49519778 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaaccaattct 49519834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 51922988 - 51923044
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||    
T  51922988 aactcacttttaaccaaaatcaattctctcaaactcaattctaacaaaatcaattct 51923044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 30 - 81
Target Start/End: Original strand, 39187787 - 39187838
Alignment:
Q  30 acttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  39187787 acttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 39187838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 13167573 - 13167627
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||    
T  13167573 aactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaatt 13167627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 54153092 - 54153146
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||    
T  54153092 aactcacttttaaccaaaatcaattcactcaaactcaattatattaaaatcaatt 54153146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 6138658 - 6138602
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||   |||||||||||||||||||||||||||||    
T  6138658 aactcacttttaaccaaaatcaattatttcaaactcaattctatcaaaatcaattct 6138602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 14076063 - 14076118
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||    
T  14076063 aactcactt-taaccaaaatcaattttctcaaactcaattctatcaaaatcaattct 14076118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 29149345 - 29149289
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| | | |||||||||||| ||||||||||||||||||||||||||||||    
T  29149345 aactcactttttagcaaaatcaattctctcaaactcaattctatcaaaatcaattct 29149289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 42944936 - 42944880
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| |||||| |||||||||||||||| ||||||    
T  42944936 aactcacttttaaccaaaatcaattctctcaaaatcaattctatcaaaataaattct 42944880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 46926095 - 46926150
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||    
T  46926095 taactcacttttaaccaaaaacaattttctcaaactcaattctatcaaaatcaatt 46926150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 6505249 - 6505303
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||| || |||||||||||||||| ||||||||||||||||||||| ||||||    
T  6505249 aactcatttttaaccaaaatcaattctctcaaactcaattctatcaaagtcaatt 6505303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 81
Target Start/End: Complemental strand, 54735679 - 54735633
Alignment:
Q  35 taaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||    
T  54735679 taaccaaaatcaattttctcaaactcaattctatcaaaatcaattct 54735633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 9893758 - 9893815
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| | || ||||||||||| |||||| |||||||||||||||||||||||    
T  9893758 taactcacttttgacaaaaatcaattctctcaaattcaattctatcaaaatcaattct 9893815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 48550264 - 48550321
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| |||||||||||| || ||| |||||||||||||||||||||||    
T  48550264 taactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattct 48550321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 15603408 - 15603464
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| | |||| ||||||||  ||||||||||||||||||||||||||||||    
T  15603408 aactcactttttaccataatcaattatctcaaactcaattctatcaaaatcaattct 15603464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 33574226 - 33574274
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaa 73  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||||||    
T  33574226 aactcacttttaaccaaaattaattctctcaaactcaattctatcaaaa 33574274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 41866202 - 41866256
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||| ||| ||||||| ||||||||||||| ||||||||||||||    
T  41866202 aactcacttttaactaaactcaattccctcaaactcaattttatcaaaatcaatt 41866256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 48908321 - 48908375
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||| ||||||||||||  ||| ||||||||||    
T  48908321 aactcacttttaaccaaaatcaattctctcaaactcaataatattaaaatcaatt 48908375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Complemental strand, 38836906 - 38836849
Alignment:
Q  145 ataacatttcattaatcaaaatgtgttcaatataatatattatcttaatcaaaatcta 202  Q
    |||||||||||||||||||||||||||||||| | | || ||| |||| |||||||||    
T  38836906 ataacatttcattaatcaaaatgtgttcaatacattctagtatattaaccaaaatcta 38836849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 45780047 - 45779992
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| | |||||||||||||  |||||||||||||||||| |||||||||||    
T  45780047 aactcactttttaccaaaatcaattt-ctcaaactcaattctatcgaaatcaattct 45779992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 53532025 - 53532081
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| ||||||||||   |||||||||||| ||||||||||||||||    
T  53532025 aactcacttttaactaaaatcaattatgtcaaactcaattttatcaaaatcaattct 53532081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 72
Target Start/End: Complemental strand, 19599534 - 19599487
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaa 72  Q
    ||||||||| ||  |||||||||||| |||||||||||||||||||||    
T  19599534 aactcacttttattcaaaatcaattctctcaaactcaattctatcaaa 19599487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 176
Target Start/End: Complemental strand, 45421741 - 45421710
Alignment:
Q  145 ataacatttcattaatcaaaatgtgttcaata 176  Q
    ||||||||||||||||||||||||||||||||    
T  45421741 ataacatttcattaatcaaaatgtgttcaata 45421710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 49136570 - 49136624
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||| ||||||||| ||||||||||||| || || ||||||||    
T  49136570 aactcacttttaaccataatcaattctctcaaactcaattataccagaatcaatt 49136624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 15619662 - 15619703
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattct 66  Q
    ||||||||| | |||||||||||||| |||||||||||||||    
T  15619662 aactcactttttaccaaaatcaattctctcaaactcaattct 15619703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 16202572 - 16202531
Alignment:
Q  41 aaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    |||||||||| |||||| |||||| |||||||||||||||||    
T  16202572 aaatcaattctctcaaaatcaattttatcaaaatcaattcta 16202531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 22694635 - 22694579
Alignment:
Q  25 aactcacttctaaccaaaatcaattc-actcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||| ||| ||||||||| |||||||||||||    
T  22694635 aactcacttttaaccaaaatcaattctacttaaa-tcaattctaccaaaatcaattct 22694579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 47739042 - 47739071
Alignment:
Q  145 ataacatttcattaatcaaaatgtgttcaa 174  Q
    ||||||||||||||||||||||||||||||    
T  47739042 ataacatttcattaatcaaaatgtgttcaa 47739071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 79
Target Start/End: Original strand, 54683453 - 54683490
Alignment:
Q  42 aatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  54683453 aatcaattcattcaaaatcaattctatcaaaatcaatt 54683490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 13183078 - 13183034
Alignment:
Q  35 taaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||||||||  |||| |||||||| ||||||||||||||    
T  13183078 taaccaaaatcaattatctcagactcaattttatcaaaatcaatt 13183034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 31520409 - 31520353
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||| |||||  |||||||  |||||| |||||||||||||    
T  31520409 aactcacttttaaccaaaattaattctttcaaacttcattctaccaaaatcaattct 31520353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 2e-20; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 83
Target Start/End: Complemental strand, 12212490 - 12212436
Alignment:
Q  29 cacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattctac 83  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12212490 cacttctaaccaaaatcaattcactcaagctcaattctatcaaaatcaattctac 12212436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 46541684 - 46541738
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46541684 aactcacttctaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 46541738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 3622485 - 3622429
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  3622485 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 3622429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 10371983 - 10371927
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  10371983 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 10371927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 48459794 - 48459850
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  48459794 aactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 48459850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 79
Target Start/End: Complemental strand, 43631722 - 43631667
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  43631722 taactcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 43631667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 28 - 81
Target Start/End: Original strand, 37639517 - 37639570
Alignment:
Q  28 tcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||||    
T  37639517 tcacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 37639570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 3375574 - 3375630
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||    
T  3375574 aactcacttttaaccaaaattaattctctcaaactcaattctatcaaaatcaattct 3375630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 34010423 - 34010479
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||    
T  34010423 aactcacttttaaccaaaatcaattctttcaaactcaattctatcaaaatcaattct 34010479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 44967424 - 44967368
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  44967424 aactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattct 44967368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 47022003 - 47022057
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||| |||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  47022003 aacttacttttaaccaaaatcaattctctcaaactcaattctatcaaaatcaatt 47022057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 47217566 - 47217512
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||    
T  47217566 aactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaatt 47217512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 3342874 - 3342930
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||| ||||||    
T  3342874 aactcacttttaactaaaatcaattctctcaaactcaattctatcaaaattaattct 3342930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 9456188 - 9456244
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||    
T  9456188 aactcacttttaaccaaaatcaattctctcgaacttaattctatcaaaatcaattct 9456244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 37562654 - 37562710
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||| ||||||||||| || |||||||||||||||||||||||||||    
T  37562654 aactcacttttaacaaaaatcaattctcttaaactcaattctatcaaaatcaattct 37562710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 38230152 - 38230208
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| || ||| |||||||||||||||||||||||    
T  38230152 aactcacttttaaccaaaatcaattctcttaaattcaattctatcaaaatcaattct 38230208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 12964682 - 12964736
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||| ||||||||||  ||||||||||||||||||||||||||||    
T  12964682 aactcacttataacgaaaatcaattatctcaaactcaattctatcaaaatcaatt 12964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 34010985 - 34010932
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  34010985 aactcactt-taaccaaaatcaattttctcaaactcaattctatcaaaatcaatt 34010932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 12632109 - 12632052
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||||||||||| |||| |||||||  |||||||||||||||||||||    
T  12632109 taactcacttttaaccaaaatctattctctcaaacaaaattctatcaaaatcaattct 12632052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 36920204 - 36920147
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||||||||||||||||  |||||||||||| ||||||||| ||||||    
T  36920204 taactcacttttaaccaaaatcaattctttcaaactcaattttatcaaaattaattct 36920147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 41715740 - 41715797
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| |||||||||||| || ||| |||||||||||||||||||||||    
T  41715740 taactcacttttaatcaaaatcaattctcttaaaatcaattctatcaaaatcaattct 41715797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 3750770 - 3750826
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||| |||||| |||||    
T  3750770 aactcacttttaaccaaaatcaattctctcaaactcaattttattaaaatctattct 3750826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 24770936 - 24770880
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||  |||||||| |||||||||||||| ||||||    
T  24770936 aactcacttttaaccaaaatcaattatctcaaacttaattctatcaaaattaattct 24770880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 81
Target Start/End: Original strand, 19097483 - 19097537
Alignment:
Q  27 ctcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||| ||| ||||||||||||  |||||||||||||||||||||| ||||||    
T  19097483 ctcacttttaatcaaaatcaattctttcaaactcaattctatcaaaattaattct 19097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 79
Target Start/End: Original strand, 48134667 - 48134717
Alignment:
Q  29 cacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||| |||| ||||||||||| ||||||||||||||||||||||| ||||    
T  48134667 cacttttaacaaaaatcaattctctcaaactcaattctatcaaaattaatt 48134717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 386501 - 386452
Alignment:
Q  30 acttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||| |||||||||||||| | ||||||||||||| ||||||||||||||    
T  386501 acttttaaccaaaatcaatactctcaaactcaattatatcaaaatcaatt 386452  T

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Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 32187023 - 32187080
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| |||||||||||| || ||| | |||||||||||||||||||||    
T  32187023 taactcacttttaatcaaaatcaattctcttaaaattaattctatcaaaatcaattct 32187080  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 82
Target Start/End: Complemental strand, 25472192 - 25472149
Alignment:
Q  39 caaaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||    
T  25472192 caaaatcaattctgtcaaaatcaattctatcaaaatcaattcta 25472149  T

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Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 39391162 - 39391108
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||||||||||||||||    ||| |||||||||||||||||||||    
T  39391162 aactcacttttaaccaaaatcaattctaaaaaaatcaattctatcaaaatcaatt 39391108  T

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Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 39977636 - 39977690
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| | || |||||||||||  ||||||| |||||||||||||||||||    
T  39977636 aactcacttttgactaaaatcaattctttcaaactaaattctatcaaaatcaatt 39977690  T

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Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 42904636 - 42904686
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaat 74  Q
    ||||||| || || |||||| |||||| |||||||||||||||||||||||    
T  42904636 taactcatttttatccaaaaacaattctctcaaactcaattctatcaaaat 42904686  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 20088953 - 20089009
Alignment:
Q  25 aactcacttctaaccaaaatcaattc-actcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||  ||| ||| |||||||||||||||||||||||    
T  20088953 aactcacttttaaccaaaatcaattatacttaaa-tcaattctatcaaaatcaattct 20089009  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Complemental strand, 25472205 - 25472164
Alignment:
Q  41 aaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    |||||||||| |||||| |||||||| |||||||||||||||    
T  25472205 aaatcaattctctcaaaatcaattctgtcaaaatcaattcta 25472164  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 34366007 - 34365950
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    |||| |||| |||| |||||||||||  |||||||| ||| |||||||||||||||||    
T  34366007 aactaacttttaactaaaatcaattctttcaaactccattatatcaaaatcaattcta 34365950  T

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Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 42740476 - 42740521
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatca 70  Q
    |||| |||| |||||||||||||||| ||||||||||||| |||||    
T  42740476 aacttacttttaaccaaaatcaattctctcaaactcaattatatca 42740521  T

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Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 206
Target Start/End: Complemental strand, 47300397 - 47300336
Alignment:
Q  145 ataacatttcattaatcaaaatgtgttcaatataatatattatcttaatcaaaatctaaaaa 206  Q
    |||| |||||||||||||||| |||||||||| ||| || ||| | || |||||||||||||    
T  47300397 ataatatttcattaatcaaaacgtgttcaatacaatttagtatttcaaccaaaatctaaaaa 47300336  T

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Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 39634190 - 39634134
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| ||||||||||||||||   |||| |||||||| || |||||||||||    
T  39634190 aactcacttttaaccaaaatcaattctaacaaaatcaattctgtccaaatcaattct 39634134  T

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Target: scaffold0381 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 9172 - 9229
Alignment:
Q  24 taactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9172 taactcacttttaatcaaaatcaattctctcaaactcaattctatcaaaatcaattct 9229  T

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Target: scaffold0394 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Complemental strand, 5868 - 5812
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||||| |||||||||||||||| ||||||||||||| ||||||||||||||||    
T  5868 aactcacttttaaccaaaatcaattctctcaaactcaattatatcaaaatcaattct 5812  T

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Target: scaffold0005 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 253191 - 253247
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattct 81  Q
    ||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  253191 aactcacatttaaccaaaatcaattctctcaaactcaattctatcaaaatcaattct 253247  T

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Target: scaffold0369 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Original strand, 8512 - 8566
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||   |||||||||||||||||||||||||||    
T  8512 aactcacttttaaccaaaatcaattatatcaaactcaattctatcaaaatcaatt 8566  T

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Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 29161 - 29107
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| ||||||||||||||||  ||||||| |||||||||||||||||||    
T  29161 aactcacttttaaccaaaatcaattctttcaaacttaattctatcaaaatcaatt 29107  T

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Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 2054 - 2011
Alignment:
Q  36 aaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    |||||||||||||||  |||||||||||||||||||||||||||    
T  2054 aaccaaaatcaattctttcaaactcaattctatcaaaatcaatt 2011  T

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Target: scaffold0983 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 2306 - 2252
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaatt 79  Q
    ||||||||| |||||||||||||||   |||||||||||||| ||||||||||||    
T  2306 aactcacttttaaccaaaatcaattatgtcaaactcaattctgtcaaaatcaatt 2252  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Complemental strand, 118448 - 118393
Alignment:
Q  25 aactcacttctaaccaaaatcaattcactcaaactcaattctatcaaaatcaattc 80  Q
    ||||||||| |||| |||||| ||||  ||||||||||||| ||||||||||||||    
T  118448 aactcacttttaacaaaaatctattctatcaaactcaattcgatcaaaatcaattc 118393  T

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Target: scaffold0068 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 38372 - 38413
Alignment:
Q  41 aaatcaattcactcaaactcaattctatcaaaatcaattcta 82  Q
    |||||||||| |||||| |||||||| |||||||||||||||    
T  38372 aaatcaattctctcaaaatcaattctgtcaaaatcaattcta 38413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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