View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF17878_low_37 (Length: 220)
Name: NF17878_low_37
Description: NF17878
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF17878_low_37 |
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Alignment Details
Target: chr1 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 8901586 - 8901744
Alignment:
| Q |
29 |
gacaaagcacttggtaatggttgttaaattacattttcgcgtactcaattagccgcgtatgattaactaatatattcatctatagtcaaaaac---taat |
125 |
Q |
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| T |
8901586 |
gacaaagcacttggtaatggttgtcaaattacattttcgcgtactcaattagccgcatatgattaactaatatattcatctatagtcaaaaactagtaat |
8901685 |
T |
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| Q |
126 |
attttatataattataatttcctttttatgatattatcttttcgtcactcataacgtca |
184 |
Q |
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| T |
8901686 |
attttatataattataatttcctttttatgatattatcttttcgtcactcataacgtca |
8901744 |
T |
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