View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1787_low_18 (Length: 426)

Name: NF1787_low_18
Description: NF1787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1787_low_18
NF1787_low_18
[»] chr4 (51 HSPs)
chr4 (74-403)||(4937750-4938074)
chr4 (195-340)||(9048644-9048789)
chr4 (1-86)||(4916342-4916427)
chr4 (195-298)||(52944333-52944436)
chr4 (198-275)||(52060910-52060987)
chr4 (195-298)||(9713934-9714037)
chr4 (195-288)||(10496367-10496460)
chr4 (204-297)||(51888204-51888297)
chr4 (132-247)||(4142672-4142788)
chr4 (238-298)||(18138908-18138968)
chr4 (238-298)||(49126121-49126181)
chr4 (132-275)||(54021905-54022049)
chr4 (1-76)||(4902565-4902639)
chr4 (195-274)||(8670531-8670610)
chr4 (205-342)||(17949318-17949453)
chr4 (205-342)||(17953170-17953305)
chr4 (133-288)||(21662469-21662625)
chr4 (133-288)||(21671233-21671389)
chr4 (194-250)||(53444188-53444244)
chr4 (237-288)||(7393303-7393354)
chr4 (140-250)||(32766584-32766695)
chr4 (367-414)||(52944219-52944266)
chr4 (212-294)||(18048909-18048991)
chr4 (204-298)||(28857424-28857518)
chr4 (195-298)||(33332553-33332658)
chr4 (204-298)||(36161733-36161827)
chr4 (204-269)||(27651995-27652060)
chr4 (204-269)||(36194760-36194825)
chr4 (1-76)||(4908411-4908490)
chr4 (204-288)||(9643420-9643504)
chr4 (204-288)||(38166223-38166306)
chr4 (204-288)||(48351179-48351263)
chr4 (3-38)||(4896584-4896619)
chr4 (204-287)||(12199686-12199769)
chr4 (370-404)||(2520695-2520729)
chr4 (370-404)||(24099227-24099261)
chr4 (366-396)||(37188708-37188738)
chr4 (366-396)||(43444336-43444366)
chr4 (366-396)||(52978750-52978780)
chr4 (198-263)||(1621491-1621556)
chr4 (239-288)||(3336152-3336201)
chr4 (202-263)||(6155217-6155278)
chr4 (366-403)||(43095549-43095586)
chr4 (366-403)||(54021780-54021817)
chr4 (195-288)||(56156626-56156719)
chr4 (369-401)||(1621654-1621686)
chr4 (195-253)||(11299978-11300033)
chr4 (143-250)||(26633602-26633710)
chr4 (369-401)||(27651868-27651900)
chr4 (195-294)||(36204363-36204467)
chr4 (204-288)||(37030293-37030377)
[»] chr1 (46 HSPs)
chr1 (194-297)||(1602096-1602198)
chr1 (195-298)||(49626919-49627021)
chr1 (195-298)||(24582956-24583058)
chr1 (195-298)||(47132908-47133011)
chr1 (195-341)||(16161795-16161946)
chr1 (195-269)||(48750219-48750293)
chr1 (194-287)||(44915655-44915748)
chr1 (140-287)||(3228285-3228433)
chr1 (195-287)||(27580112-27580204)
chr1 (204-298)||(6217820-6217914)
chr1 (204-298)||(12635175-12635269)
chr1 (204-298)||(16262866-16262960)
chr1 (202-288)||(34528745-34528831)
chr1 (195-297)||(44543279-44543380)
chr1 (195-288)||(23291626-23291719)
chr1 (362-415)||(26535284-26535337)
chr1 (209-269)||(34413088-34413148)
chr1 (204-287)||(18939336-18939418)
chr1 (197-288)||(27456555-27456646)
chr1 (195-250)||(34878262-34878317)
chr1 (195-262)||(36775694-36775761)
chr1 (140-249)||(21947546-21947656)
chr1 (204-298)||(31692460-31692553)
chr1 (195-288)||(1742296-1742389)
chr1 (195-288)||(7836780-7836873)
chr1 (140-288)||(10776389-10776538)
chr1 (195-252)||(14872690-14872747)
chr1 (197-286)||(45789558-45789647)
chr1 (195-275)||(5983864-5983944)
chr1 (132-235)||(32873784-32873888)
chr1 (197-249)||(39888236-39888288)
chr1 (204-342)||(19060870-19061008)
chr1 (195-234)||(28053700-28053739)
chr1 (366-404)||(1742181-1742219)
chr1 (366-395)||(12635076-12635105)
chr1 (366-403)||(23291796-23291833)
chr1 (362-403)||(27456443-27456484)
chr1 (206-271)||(30506167-30506232)
chr1 (204-289)||(40163422-40163507)
chr1 (366-410)||(8212063-8212107)
chr1 (238-298)||(9687199-9687259)
chr1 (195-227)||(15431650-15431682)
chr1 (369-401)||(34413247-34413279)
chr1 (195-263)||(37720133-37720201)
chr1 (229-273)||(40163515-40163559)
chr1 (369-401)||(48750092-48750124)
[»] chr3 (46 HSPs)
chr3 (195-276)||(26716091-26716172)
chr3 (204-338)||(35175364-35175499)
chr3 (194-288)||(19339187-19339281)
chr3 (195-298)||(21289798-21289905)
chr3 (204-341)||(29239300-29239438)
chr3 (195-269)||(51303627-51303701)
chr3 (204-288)||(4821818-4821902)
chr3 (195-283)||(14859506-14859594)
chr3 (194-288)||(20464953-20465047)
chr3 (195-288)||(33579891-33579984)
chr3 (195-342)||(38545758-38545903)
chr3 (140-232)||(23799838-23799931)
chr3 (204-276)||(628916-628987)
chr3 (195-263)||(8914748-8914816)
chr3 (195-287)||(21313048-21313140)
chr3 (199-275)||(32246471-32246547)
chr3 (204-276)||(48199800-48199872)
chr3 (195-250)||(53099839-53099894)
chr3 (212-294)||(4396335-4396417)
chr3 (195-269)||(51923757-51923831)
chr3 (195-273)||(53508252-53508330)
chr3 (195-297)||(53807842-53807943)
chr3 (195-288)||(18011031-18011124)
chr3 (206-275)||(27856188-27856257)
chr3 (238-298)||(31794090-31794150)
chr3 (366-402)||(33579767-33579803)
chr3 (204-288)||(35864925-35865009)
chr3 (195-275)||(46304504-46304584)
chr3 (195-250)||(47042032-47042087)
chr3 (195-297)||(2208838-2208939)
chr3 (366-396)||(2342420-2342450)
chr3 (195-269)||(7546645-7546719)
chr3 (363-393)||(22290846-22290876)
chr3 (195-269)||(27706210-27706284)
chr3 (370-404)||(36461588-36461622)
chr3 (230-275)||(38142558-38142604)
chr3 (195-273)||(45424824-45424902)
chr3 (366-404)||(47042205-47042243)
chr3 (231-297)||(52496929-52496995)
chr3 (366-415)||(53808019-53808068)
chr3 (194-250)||(6954679-6954735)
chr3 (195-288)||(7887427-7887522)
chr3 (195-227)||(32701563-32701595)
chr3 (204-288)||(37040780-37040864)
chr3 (366-402)||(47896051-47896087)
chr3 (366-402)||(53508120-53508156)
[»] chr7 (39 HSPs)
chr7 (204-288)||(38880571-38880655)
chr7 (195-341)||(28476183-28476334)
chr7 (195-341)||(22742900-22743051)
chr7 (195-288)||(37837442-37837535)
chr7 (207-275)||(22087344-22087412)
chr7 (197-288)||(5348578-5348669)
chr7 (195-288)||(45349783-45349876)
chr7 (140-287)||(25287114-25287262)
chr7 (195-263)||(35132986-35133054)
chr7 (204-263)||(1749140-1749199)
chr7 (195-250)||(9977190-9977245)
chr7 (195-341)||(24350823-24350972)
chr7 (206-288)||(26623784-26623867)
chr7 (195-250)||(38798833-38798888)
chr7 (195-250)||(39328774-39328829)
chr7 (195-341)||(44311776-44311922)
chr7 (198-288)||(4530090-4530180)
chr7 (194-288)||(19404740-19404834)
chr7 (195-288)||(31482082-31482172)
chr7 (195-275)||(24770273-24770353)
chr7 (197-261)||(39229055-39229119)
chr7 (136-170)||(5792929-5792963)
chr7 (370-404)||(9450294-9450328)
chr7 (369-415)||(19404911-19404957)
chr7 (204-298)||(24069387-24069481)
chr7 (369-415)||(24351000-24351046)
chr7 (370-404)||(30756976-30757010)
chr7 (362-404)||(37837608-37837650)
chr7 (366-404)||(42978509-42978547)
chr7 (369-410)||(1749300-1749341)
chr7 (366-403)||(24770155-24770192)
chr7 (136-288)||(46700049-46700202)
chr7 (195-288)||(47590325-47590418)
chr7 (195-275)||(11343837-11343917)
chr7 (369-401)||(22742840-22742872)
chr7 (362-402)||(25287335-25287375)
chr7 (198-288)||(27997105-27997192)
chr7 (369-401)||(28476123-28476155)
chr7 (369-401)||(48930682-48930714)
[»] chr2 (50 HSPs)
chr2 (195-287)||(30400020-30400112)
chr2 (197-288)||(17151445-17151536)
chr2 (197-288)||(28871775-28871866)
chr2 (195-288)||(41327525-41327618)
chr2 (195-342)||(32448604-32448751)
chr2 (195-298)||(28533939-28534042)
chr2 (204-298)||(29574622-29574716)
chr2 (195-275)||(36175481-36175561)
chr2 (204-271)||(12554175-12554242)
chr2 (195-298)||(17249132-17249234)
chr2 (195-298)||(23933604-23933707)
chr2 (198-341)||(3308909-3309057)
chr2 (194-288)||(4264494-4264588)
chr2 (194-288)||(6436629-6436723)
chr2 (209-299)||(11812694-11812784)
chr2 (132-288)||(4904066-4904223)
chr2 (195-288)||(25509053-25509146)
chr2 (195-263)||(10237201-10237269)
chr2 (140-247)||(29279499-29279607)
chr2 (195-275)||(31128765-31128845)
chr2 (195-250)||(1415617-1415672)
chr2 (204-275)||(10929700-10929771)
chr2 (204-275)||(33760187-33760258)
chr2 (195-253)||(12677435-12677493)
chr2 (139-247)||(19062280-19062389)
chr2 (207-259)||(10792862-10792914)
chr2 (195-247)||(41694684-41694736)
chr2 (365-396)||(4192774-4192805)
chr2 (195-250)||(19028899-19028954)
chr2 (209-288)||(19597901-19597980)
chr2 (195-250)||(33923765-33923820)
chr2 (195-250)||(35220385-35220440)
chr2 (229-288)||(37994301-37994360)
chr2 (195-269)||(14955570-14955644)
chr2 (204-274)||(24461479-24461549)
chr2 (366-404)||(43397274-43397312)
chr2 (366-403)||(12648078-12648115)
chr2 (195-288)||(14423347-14423440)
chr2 (366-403)||(28227839-28227876)
chr2 (366-403)||(29279724-29279761)
chr2 (366-403)||(31128933-31128970)
chr2 (195-288)||(36691896-36691989)
chr2 (204-253)||(42698695-42698744)
chr2 (203-247)||(7646536-7646580)
chr2 (369-401)||(10237370-10237402)
chr2 (195-263)||(18763515-18763583)
chr2 (366-402)||(29574787-29574823)
chr2 (370-402)||(31788366-31788398)
chr2 (194-298)||(34128668-34128772)
chr2 (238-298)||(34599013-34599073)
[»] chr8 (43 HSPs)
chr8 (195-298)||(5333433-5333536)
chr8 (195-298)||(15344313-15344415)
chr8 (195-298)||(15433378-15433480)
chr8 (195-298)||(15524682-15524784)
chr8 (195-341)||(41896473-41896624)
chr8 (197-288)||(33347505-33347595)
chr8 (140-288)||(17693540-17693689)
chr8 (206-298)||(1236690-1236781)
chr8 (206-298)||(1239390-1239481)
chr8 (195-263)||(18890681-18890749)
chr8 (216-288)||(41060252-41060324)
chr8 (195-340)||(45445793-45445936)
chr8 (195-298)||(29617256-29617359)
chr8 (132-250)||(33214589-33214708)
chr8 (194-249)||(42046274-42046329)
chr8 (194-288)||(16247204-16247298)
chr8 (194-263)||(18847120-18847189)
chr8 (195-299)||(8981166-8981270)
chr8 (195-341)||(20227263-20227409)
chr8 (204-247)||(28086804-28086847)
chr8 (195-341)||(39657410-39657561)
chr8 (140-275)||(7677209-7677345)
chr8 (195-263)||(27498347-27498414)
chr8 (198-275)||(34609860-34609940)
chr8 (201-288)||(36948425-36948512)
chr8 (204-298)||(8443502-8443596)
chr8 (369-403)||(14585600-14585634)
chr8 (370-404)||(20553401-20553435)
chr8 (370-404)||(20559901-20559935)
chr8 (370-404)||(20571463-20571497)
chr8 (366-396)||(26469348-26469378)
chr8 (362-404)||(33214779-33214821)
chr8 (370-404)||(37971192-37971226)
chr8 (370-412)||(41896402-41896444)
chr8 (195-288)||(471148-471241)
chr8 (366-403)||(14545053-14545090)
chr8 (229-341)||(24099271-24099384)
chr8 (366-395)||(40619224-40619253)
chr8 (195-275)||(3673468-3673548)
chr8 (204-288)||(5046767-5046851)
chr8 (195-263)||(14585716-14585784)
chr8 (204-288)||(14916178-14916262)
chr8 (195-263)||(26469128-26469196)
[»] chr5 (33 HSPs)
chr5 (134-288)||(19120924-19121078)
chr5 (194-341)||(19103450-19103602)
chr5 (195-298)||(8088196-8088298)
chr5 (197-288)||(41749337-41749428)
chr5 (204-288)||(37986106-37986190)
chr5 (195-281)||(6216916-6217002)
chr5 (142-287)||(31391683-31391829)
chr5 (195-341)||(28540890-28541041)
chr5 (194-250)||(13421982-13422038)
chr5 (195-275)||(26878092-26878172)
chr5 (195-263)||(41630538-41630606)
chr5 (195-269)||(2979290-2979364)
chr5 (195-269)||(14211257-14211331)
chr5 (195-248)||(39567321-39567374)
chr5 (140-227)||(1409570-1409658)
chr5 (195-263)||(10722797-10722865)
chr5 (204-288)||(11976928-11977012)
chr5 (195-275)||(25980182-25980262)
chr5 (203-275)||(31315932-31316004)
chr5 (195-250)||(35850848-35850903)
chr5 (366-404)||(8096651-8096689)
chr5 (202-327)||(10332539-10332665)
chr5 (366-404)||(11977090-11977128)
chr5 (366-403)||(7036126-7036163)
chr5 (237-298)||(28235609-28235670)
chr5 (369-401)||(2979469-2979501)
chr5 (366-402)||(4771039-4771075)
chr5 (369-401)||(14211130-14211162)
chr5 (195-263)||(15571522-15571590)
chr5 (370-402)||(24229942-24229974)
chr5 (369-401)||(28541069-28541101)
chr5 (204-288)||(35920989-35921073)
chr5 (369-401)||(39567195-39567227)
[»] chr6 (29 HSPs)
chr6 (204-298)||(26588465-26588559)
chr6 (140-268)||(29255374-29255503)
chr6 (140-249)||(8102778-8102888)
chr6 (204-297)||(679113-679206)
chr6 (195-288)||(6957163-6957256)
chr6 (140-288)||(34018573-34018722)
chr6 (204-288)||(11321462-11321546)
chr6 (195-263)||(14801865-14801933)
chr6 (195-298)||(528334-528437)
chr6 (195-269)||(546062-546137)
chr6 (195-298)||(31296823-31296926)
chr6 (140-249)||(30894652-30894761)
chr6 (204-249)||(23128670-23128715)
chr6 (362-402)||(11321618-11321658)
chr6 (195-250)||(127720-127775)
chr6 (204-298)||(22571477-22571572)
chr6 (195-298)||(30493535-30493638)
chr6 (198-249)||(30776715-30776766)
chr6 (366-396)||(4984694-4984724)
chr6 (366-396)||(9508832-9508862)
chr6 (199-253)||(20225899-20225953)
chr6 (199-253)||(22119883-22119937)
chr6 (206-342)||(28981135-28981272)
chr6 (195-288)||(34185677-34185770)
chr6 (195-227)||(7515186-7515218)
chr6 (238-298)||(12652966-12653026)
chr6 (238-298)||(23947313-23947373)
chr6 (366-410)||(28981069-28981113)
chr6 (366-410)||(30608667-30608711)
[»] scaffold0445 (1 HSPs)
scaffold0445 (195-288)||(1356-1449)
[»] scaffold0262 (1 HSPs)
scaffold0262 (140-275)||(1747-1883)
[»] scaffold0009 (2 HSPs)
scaffold0009 (195-287)||(58072-58164)
scaffold0009 (366-415)||(58233-58282)
[»] scaffold0884 (1 HSPs)
scaffold0884 (140-288)||(1901-2050)
[»] scaffold0128 (1 HSPs)
scaffold0128 (194-231)||(36894-36931)
[»] scaffold0042 (1 HSPs)
scaffold0042 (195-288)||(92480-92573)
[»] scaffold0888 (2 HSPs)
scaffold0888 (204-263)||(1671-1730)
scaffold0888 (369-401)||(1831-1863)
[»] scaffold0347 (1 HSPs)
scaffold0347 (204-343)||(5986-6126)


Alignment Details
Target: chr4 (Bit Score: 200; Significance: 1e-109; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 74 - 403
Target Start/End: Complemental strand, 4938074 - 4937750
Alignment:
Q  74 taggtgttggtacgtacttggtggatagatgaatttaattctaaaccgaacctcattcatgtctataaataatatgataaaacataagtcatcgaaaaat 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |     ||||| ||||||||||||||||| ||||||||||||| ||    
T  4938074 taggtgttggtacgtacttggtggatagatgaatttaattctaaaccgaacctaa-----gtctacaaataatatgataaaacgtaagtcatcgaaatat 4937980  T
Q  174 taatgtttttggatccgtaaattgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaa 273  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||| ||||  ||||||| ||||||||||||| |||||||||||||||||||||||    
T  4937979 taatgtttctggatccgtatattgacgcctaaatcattgattgaatttataatcgactgaagttgatctttcaataaaaatcaaacgaactccgcaacaa 4937880  T
Q  274 gatgtaaaatcaaactacgccgcactaacgacatacaagacaacgtggtactcagacgaagaaatcacacnnnnnnnnnnnnnnnnnncttaatatatgt 373  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||                  |||||||||| |    
T  4937879 gatgtaaaatcaaacaacgccgcactaacgacatacaagacaacgtcgtactcagacgaagaaatcacacaaaacaaaaaagaaaaaacttaatatatat 4937780  T
Q  374 gaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||||||||||||||||||||||    
T  4937779 gaaaatcacttatttagattgaacgaaaag 4937750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 195 - 340
Target Start/End: Complemental strand, 9048789 - 9048644
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||||  |||||||||||||||||||| ||||||||||||| ||||||||| ||||| ||||||||| |||||||||||    |||||| || |||||    
T  9048789 ttgacgctcaaatcattgattgaatttgtgattaactgaagcttatctttcaaaagaaaccaaacgaacaccgcaacaagacccgaaatcagacaacgcc 9048690  T
Q  295 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatca 340  Q
    |||| | |||||| |||||| ||||  | ||||||||||| ||||||    
T  9048689 gcacaagacgacaaacaaga-aacgccgcactcagacgaaaaaatca 9048644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4916427 - 4916342
Alignment:
Q  1 tgaggttcaaagtgagtacaagagtagtggtcagtttcggccattgtataaagcaaacattattgagaacaaataggtgttggtac 86  Q
    ||||||||||||||||| ||||||||||| | |||||| |||||| |||||||||| ||||||||||||||||||| | |||||||    
T  4916427 tgaggttcaaagtgagtgcaagagtagtgataagtttcagccattatataaagcaatcattattgagaacaaatagtttttggtac 4916342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 52944436 - 52944333
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | ||||||| |||||||| ||| ||| |||||||||||||||||||||  || ||||||||| ||||||||||| | ||||| |||| |||||    
T  52944436 ttgacgtccaaatcatcgattgaatctgtgattgactgaagctgatctttcaatatgaaacaaacgaacaccgcaacaagacgcaaaattaaacaacgcc 52944337  T
Q  295 gcac 298  Q
    ||||    
T  52944336 gcac 52944333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 198 - 275
Target Start/End: Original strand, 52060910 - 52060987
Alignment:
Q  198 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    ||||| |||||||||||||||| ||||||| ||||||| |||||||||||||| ||| |||||||| || ||||||||    
T  52060910 acgcccaaatcattgattgaatctgtaattgactgaagttgatctttcaataggaattaaacgaacacctcaacaaga 52060987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 9714037 - 9713934
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||||| ||||| |||||||||||||| |||   ||||||||||||| |||||  ||  |||||||||||||||||| |||| ||||||||| ||| |    
T  9714037 ttgacgcccaaatcgttgattgaatttgtgattgtttgaagctgatcttccaatatgaaagaaacgaactccgcaacaatatgtgaaatcaaacaacgtc 9713938  T
Q  295 gcac 298  Q
    ||||    
T  9713937 gcac 9713934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 10496460 - 10496367
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||||||||||||| ||  |||||||| | || |||||| | ||||||||||    
T  10496460 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaactaaacgaacactgcgacaagacgcaaaatcaaac 10496367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 297
Target Start/End: Original strand, 51888204 - 51888297
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgca 297  Q
    |||||||||||| ||||||| ||| | ||||| |||||||||||||  || ||||||||| |||||||||||||  ||||||||| ||| ||||    
T  51888204 aaatcattgattaaatttgtgattgattgaagttgatctttcaatatgaaccaaacgaacaccgcaacaagatgcgaaatcaaacaacgtcgca 51888297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 4142672 - 4142788
Alignment:
Q  132 atgtctataaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaattaac 230  Q
    ||||||| ||||||||||||||||| ||||||| ||||| | | |||||| |||||| | ||  |||||| | ||||||||| |||||||||||||| ||    
T  4142672 atgtctacaaataatatgataaaacttaagtcaccgaaatactcatgtttctggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgac 4142771  T
Q  231 tgaagctgatctttcaa 247  Q
    ||| |  ||||||||||    
T  4142772 tgatgtagatctttcaa 4142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 18138908 - 18138968
Alignment:
Q  238 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    ||||||||||||||||||||| |||| | ||||||||||| |||||||||| |||||||||    
T  18138908 gatctttcaatagaaatcaaatgaacactgcaacaagatggaaaatcaaacaacgccgcac 18138968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 49126121 - 49126181
Alignment:
Q  238 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    ||||||||||||||||||||| |||| | ||||||||||| |||||||||| |||||||||    
T  49126121 gatctttcaatagaaatcaaatgaacactgcaacaagatggaaaatcaaacaacgccgcac 49126181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 132 - 275
Target Start/End: Complemental strand, 54022049 - 54021905
Alignment:
Q  132 atgtctataaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaac 230  Q
    ||||||| ||||||||||||||||  ||||||| ||||| ||  ||||||| ||||| | ||  |||||  | |||||||||||| ||||||||||| ||    
T  54022049 atgtctacaaataatatgataaaatctaagtcaccgaaatatccatgttttcggatctgcaacgttgacatccaaatcattgattcaatttgtaattgac 54021950  T
Q  231 tgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    ||| |  ||||||||||||| ||  |||||||| |||| ||||||    
T  54021949 tgatgtcgatctttcaataggaactaaacgaacaccgcgacaaga 54021905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4902639 - 4902565
Alignment:
Q  1 tgaggttcaaagtgagtacaagagtagtggtcagtttcggccattgtataaagcaaacattattgagaacaaatag 76  Q
    ||||||||||||||||||||||||||||||| ||||||   |||| ||||||| |  |||||||||||||||||||    
T  4902639 tgaggttcaaagtgagtacaagagtagtggtaagtttc-aacattatataaagaagtcattattgagaacaaatag 4902565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 8670610 - 8670531
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaag 274  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||||||||||||| ||  |||||||| |||| |||||    
T  8670610 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaataaacgaacaccgcgacaag 8670531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 342
Target Start/End: Original strand, 17949318 - 17949453
Alignment:
Q  205 aatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-acg 303  Q
    |||||||| |||||||||||||| ||||| |  ||||||||||||| ||| |||||||| |||| |||| | | ||||||||   ||||||||| | |||    
T  17949318 aatcattggttgaatttgtaattgactgatgtagatctttcaataggaattaaacgaacaccgcgacaaaacgcaaaatcaa---acgccgcacaacacg 17949414  T
Q  304 acatacaagacaacgtggtactcagacgaagaaatcaca 342  Q
    ||| |||| ||||||  | ||| |||||| |||||||||    
T  17949415 acaaacaacacaacgccgcacttagacgacgaaatcaca 17949453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 342
Target Start/End: Original strand, 17953170 - 17953305
Alignment:
Q  205 aatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-acg 303  Q
    |||||||| |||||||||||||| ||||| |  ||||||||||||| ||| |||||||| |||| |||| | | ||||||||   ||||||||| | |||    
T  17953170 aatcattggttgaatttgtaattgactgatgtagatctttcaataggaattaaacgaacaccgcgacaaaacgcaaaatcaa---acgccgcacaacacg 17953266  T
Q  304 acatacaagacaacgtggtactcagacgaagaaatcaca 342  Q
    ||| |||| ||||||  | ||| |||||| |||||||||    
T  17953267 acaaacaacacaacgccgcacttagacgacgaaatcaca 17953305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 288
Target Start/End: Complemental strand, 21662625 - 21662469
Alignment:
Q  133 tgtctataaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaact 231  Q
    |||||| ||||||||||||||||| ||||||| ||||| |   ||| ||  ||||| | ||  |||||||  ||||||||||||| |||||||||| |||    
T  21662625 tgtctacaaataatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatcattgattggatttgtaattgact 21662526  T
Q  232 gaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    || | |||||||||||||| ||  |||||||  |||| |||||| |  |||||||||    
T  21662525 gatgttgatctttcaataggaactaaacgaataccgcgacaagacgcgaaatcaaac 21662469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 288
Target Start/End: Complemental strand, 21671389 - 21671233
Alignment:
Q  133 tgtctataaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaact 231  Q
    |||||| ||||||||||||||||| ||||||| ||||| |   ||| ||  ||||| | ||  |||||||  ||||||||||||| |||||||||| |||    
T  21671389 tgtctacaaataatatgataaaacctaagtcaccgaaatacccatgcttccggatctgcaacgttgacgctcaaatcattgattggatttgtaattgact 21671290  T
Q  232 gaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    || | |||||||||||||| ||  |||||||  |||| |||||| |  |||||||||    
T  21671289 gatgttgatctttcaataggaactaaacgaataccgcgacaagacgcgaaatcaaac 21671233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 53444244 - 53444188
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    ||||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  53444244 attgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 53444188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 237 - 288
Target Start/End: Complemental strand, 7393354 - 7393303
Alignment:
Q  237 tgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||| |||||||||||| || ||||||||||| |||||||||    
T  7393354 tgatctttcaataggaatcaaacgaacaccacaacaagatgtgaaatcaaac 7393303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 250
Target Start/End: Complemental strand, 32766695 - 32766584
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||| ||||||| ||||| |   ||||||  ||||| | || ||||||| | |||||||||||||||||||||||| ||||| |  |    
T  32766695 aaataatatgataaaacttaagtcaccgaaatacccatgtttccggatctgcaacattgacgtccaaatcattgattgaatttgtaattgactgatgtag 32766596  T
Q  239 atctttcaatag 250  Q
    |||||| |||||    
T  32766595 atcttttaatag 32766584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 367 - 414
Target Start/End: Complemental strand, 52944266 - 52944219
Alignment:
Q  367 tatatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgat 414  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||    
T  52944266 tatatgtgaaaatcacttatttagattgaaagaaaagggaaaaatgat 52944219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 294
Target Start/End: Complemental strand, 18048991 - 18048909
Alignment:
Q  212 gattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||||| | | ||| ||||||||| |||||||||||  |||||||||||| ||||||||||  | |||||||||| |||||    
T  18048991 gattgaatctatgattgactgaagcttatctttcaatatgaatcaaacgaacaccgcaacaaggcgcaaaatcaaacaacgcc 18048909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 28857518 - 28857424
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||  ||||||| ||| ||| |||||||||||||||||||||  || ||||||||| ||||||| ||| |   |||||||| |||||||||    
T  28857518 aaatcatcaattgaatatgtgattgactgaagctgatctttcaatatgaaacaaacgaacaccgcaactagacgcggaatcaaacaacgccgcac 28857424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 33332553 - 33332658
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caacaagatgtaaaatcaaactacg 292  Q
    |||||| | |||||||||||||||| ||| |||  |||||| ||||||||||||| |||  |||||||| |||  ||||||||||  ||||||||| |||    
T  33332553 ttgacgtccaaatcattgattgaatctgtgattgtctgaagttgatctttcaataaaaacgaaacgaacaccgcacaacaagatgcgaaatcaaacaacg 33332652  T
Q  293 ccgcac 298  Q
     |||||    
T  33332653 tcgcac 33332658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 36161827 - 36161733
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||||| ||| ||| |||||| || ||||||| |||  ||  |||||||| ||||||||| | |||||||||||| ||| |||||    
T  36161827 aaatcattgattgaatatgtgattgactgaaactaatctttcgatatgaacaaaacgaacaccgcaacaaaacgtaaaatcaaacaacgacgcac 36161733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 27652060 - 27651995
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||||||||||||||||| |||  || |||||||||||||||||  || ||||||||| |||||    
T  27652060 aaatcattgattgaatttgtgattgtctaaagctgatctttcaatacgaaccaaacgaacaccgca 27651995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 269
Target Start/End: Complemental strand, 36194825 - 36194760
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||||||||||||||||| |||   |||||||||||||||||||  || ||||||||| |||||    
T  36194825 aaatcattgattgaatttgtgattgtttgaagctgatctttcaatacgaaccaaacgaacaccgca 36194760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 4908490 - 4908411
Alignment:
Q  1 tgaggttcaaagtgagtacaagagtag-----tggtcagtttcggccattgtataaagcaaacattattgagaacaaatag 76  Q
    |||||||||||||||||||||||| ||     |||| |||||| || ||| |||||||||| |||||||||||||||||||    
T  4908490 tgaggttcaaagtgagtacaagagaagagaagtggtaagtttcagc-attatataaagcaatcattattgagaacaaatag 4908411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 9643504 - 9643420
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| ||||||| ||| ||| ||||||| |||||||| ||||  || ||||||||| | |||||||||||  |||||||||    
T  9643504 aaatcattaattgaatatgtgattgactgaagttgatcttttaatatgaaccaaacgaacactgcaacaagatgagaaatcaaac 9643420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 38166223 - 38166306
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||| |||||| | | ||||||| ||| ||||||||||||| ||||||||| ||| || ||| ||||||| |||||||||    
T  38166223 aaatcattgcttgaatctatgattaact-aagttgatctttcaatataaatcaaacaaacaccacaataagatgtgaaatcaaac 38166306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 48351179 - 48351263
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||| | |||||| ||| ||| ||||||||||||||||||||| ||| ||||||||| |||  |||||| |  |||||||||    
T  48351179 aaatcataggttgaatatgtgattgactgaagctgatctttcaatataaaccaaacgaacaccgtgacaagacgcgaaatcaaac 48351263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 38
Target Start/End: Complemental strand, 4896619 - 4896584
Alignment:
Q  3 aggttcaaagtgagtacaagagtagtggtcagtttc 38  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4896619 aggttcaaagtgagtacaagagtagtggtaagtttc 4896584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 12199686 - 12199769
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    ||||| |||||||||| ||||| | ||||||| |||| ||||||||  ||  |||||||| ||||||||||| | |||||||||    
T  12199686 aaatctttgattgaatctgtaactgactgaagttgatatttcaatatgaactaaacgaacaccgcaacaagacgcaaaatcaaa 12199769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 2520729 - 2520695
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||| |||||||||||||||||||||||||    
T  2520729 atgtgaaaaccacttatttagattgaacgaaaagg 2520695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 24099227 - 24099261
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||||||||||||||||| |||||||    
T  24099227 atgtgaaaatcacttatttagattgaaagaaaagg 24099261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 396
Target Start/End: Original strand, 37188708 - 37188738
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaa 396  Q
    |||||||||||||||||||||||||||||||    
T  37188708 atatatgtgaaaatcacttatttagattgaa 37188738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 396
Target Start/End: Complemental strand, 43444366 - 43444336
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaa 396  Q
    |||||||||||||||||||||||||||||||    
T  43444366 atatatgtgaaaatcacttatttagattgaa 43444336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 396
Target Start/End: Complemental strand, 52978780 - 52978750
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaa 396  Q
    |||||||||||||||||||||||||||||||    
T  52978780 atatatgtgaaaatcacttatttagattgaa 52978750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 1621491 - 1621556
Alignment:
Q  198 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    ||||| |||||||||||||||||| | |||   |||||||||||||||||||  || |||||||||    
T  1621491 acgcccaaatcattgattgaatttatgattgtttgaagctgatctttcaatacgaaccaaacgaac 1621556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 239 - 288
Target Start/End: Original strand, 3336152 - 3336201
Alignment:
Q  239 atctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||  ||||||| |||| ||||||||||||| ||||||||||    
T  3336152 atctttcaatatgaatcaaatgaacaccgcaacaagatggaaaatcaaac 3336201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 6155217 - 6155278
Alignment:
Q  202 ctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    ||||||||| |||||||  ||| ||| |||||| ||||||||||||||  ||||||||||||    
T  6155217 ctaaatcatcgattgaacatgtgattgactgaaactgatctttcaatatgaatcaaacgaac 6155278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Complemental strand, 43095586 - 43095549
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  43095586 atatatgtgaaaaccacttatttagattgaaagaaaag 43095549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Complemental strand, 54021817 - 54021780
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  54021817 atatatgtgaaaaccacttatttagattgaaagaaaag 54021780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 56156626 - 56156719
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||  |||||||| |||||||||||||| ||||| | | ||||||||| || ||  |||||||| |||| |||||| |  |||||||||    
T  56156626 ttgacgccccaatcattggttgaatttgtaattgactgatgttaatctttcaagaggaactaaacgaacaccgcgacaagacgcgaaatcaaac 56156719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 1621654 - 1621686
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  1621654 tatgtgaaaatcacttatttagattgaatgaaa 1621686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 11299978 - 11300033
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 253  Q
    |||||||| ||||||||| |||||||||||||  |||   |||||||||||||||||||    
T  11299978 ttgacgcccaaatcattgtttgaatttgtaatcgact---gctgatctttcaatagaaa 11300033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 26633602 - 26633710
Alignment:
Q  143 taatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaattaactgaagctgatc 241  Q
    |||||||||||||| |||||||  |||| ||| ||| ||  ||||| | || ||||||| | ||||||||| |||||||||||||  ||||| |  ||||    
T  26633602 taatatgataaaacctaagtcacagaaatattcatgcttccggatctgcaacattgacgtccaaatcattggttgaatttgtaatcgactgatgtagatc 26633701  T
Q  242 tttcaatag 250  Q
    |||||||||    
T  26633702 tttcaatag 26633710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 27651900 - 27651868
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  27651900 tatgtgaaaatcacttatttagattgaaagaaa 27651868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 294
Target Start/End: Original strand, 36204363 - 36204467
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaat-----taactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaact 289  Q
    |||||| | |||||||||||||||||||| ||     | |||||||||||| ||||||||  || |||| |||| ||||||||| |||  |||||||||     
T  36204363 ttgacgtccaaatcattgattgaatttgtgatgtgattgactgaagctgatttttcaatatgaaccaaatgaacaccgcaacaatatgcgaaatcaaaca 36204462  T
Q  290 acgcc 294  Q
    |||||    
T  36204463 acgcc 36204467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 37030377 - 37030293
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||||| |||| || | ||||| ||||||||  ||||||| |||||| || |||| ||||||  | |||||||||    
T  37030377 aaatcattgattgaatctgtatttgattgaagttgatcttttgatagaaaccaaacgtacaccgcgacaagacatgaaatcaaac 37030293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 194 - 297
Target Start/End: Complemental strand, 1602198 - 1602096
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgc 293  Q
    ||||| ||||||||||||||||||| |||||||| ||| |||  |||||||||||||||||||||||||| ||||||||||||| |||||||||| |||     
T  1602198 attgatgcctaaatcattgattgaaattgtaattgact-aagtcgatctttcaatagaaatcaaacgaacgccgcaacaagatgcaaaatcaaacaacgt 1602100  T
Q  294 cgca 297  Q
    ||||    
T  1602099 cgca 1602096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 49627021 - 49626919
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||||||| ||| |||||||||||||||||||||  || | ||||||| |||||||||||||| ||||||||| |||||    
T  49627021 ttgacgtccaaatcattgattgaatttgtgattgactgaagctgatctttcaatatgaa-ccaacgaacaccgcaacaagatgtcaaatcaaacaacgcc 49626923  T
Q  295 gcac 298  Q
    ||||    
T  49626922 gcac 49626919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 24583058 - 24582956
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| |||||||||||||||||||||  || | ||||||| |||||||||||||  ||||||||| |||||    
T  24583058 ttgacgtccaaatcattgattgaatctgtgattgactgaagctgatctttcaatatgaa-ccaacgaacaccgcaacaagatgccaaatcaaacaacgcc 24582960  T
Q  295 gcac 298  Q
    ||||    
T  24582959 gcac 24582956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 47133011 - 47132908
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | ||||||| |||||||| ||| ||| |||||||||||||||||||||  || ||||||||| ||||||||||| |  |||| |||| |||||    
T  47133011 ttgacgtccaaatcatcgattgaatctgtgattgactgaagctgatctttcaatatgaagcaaacgaacaccgcaacaagacgcgaaattaaacaacgcc 47132912  T
Q  295 gcac 298  Q
    ||||    
T  47132911 gcac 47132908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 341
Target Start/End: Complemental strand, 16161946 - 16161795
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 290  Q
    |||||||| |||||||||| ||||||||| |||  || |||||||||||||||||  || ||||||||| |||||    | ||||||| ||||||||| |    
T  16161946 ttgacgcccaaatcattgaatgaatttgtgattgtcttaagctgatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgtgaaatcaaacaa 16161847  T
Q  291 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  16161846 cgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 16161795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 48750293 - 48750219
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||||| |||||||||||| ||||||| |||  ||||||||||||||||||||  |||||||||||| |||||    
T  48750293 ttgacgcccaaatcattgattaaatttgtgattgtctgaagctgatctttcaatacgaatcaaacgaacaccgca 48750219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 287
Target Start/End: Complemental strand, 44915748 - 44915655
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    ||||||||| |||||||||||||||||||||||| ||||| | |||||||||||||  ||  |||||||| |||| |||| | | |||||||||    
T  44915748 attgacgcccaaatcattgattgaatttgtaattgactgatgttgatctttcaatatgaactaaacgaacaccgcgacaaaacgcaaaatcaaa 44915655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 287
Target Start/End: Complemental strand, 3228433 - 3228285
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||| ||| ||||||||| ||  ||| ||| ||||| | ||  |||||||| ||||||||||||| |||||||||| |||||    |    
T  3228433 aaataatatgataaaacctaaatcatcgaaatatccatgatttcggatctgcaacgttgacgcccaaatcattgattgtatttgtaattgactgatatcg 3228334  T
Q  239 atctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    |||||||||||| ||  |||| ||| |||| ||||||||  ||||||||    
T  3228333 atctttcaataggaactaaacaaacaccgcgacaagatgcgaaatcaaa 3228285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 27580112 - 27580204
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    |||||||| |||||||| ||||||||||||||| |||||||  ||||||||||||| ||  ||| |||| |||| |||||| | |||||||||    
T  27580112 ttgacgcccaaatcatttattgaatttgtaatttactgaagtcgatctttcaataggaactaaatgaacaccgcgacaagacgcaaaatcaaa 27580204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 6217820 - 6217914
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||||||||| ||| ||||||| ||||||||||||| | | |||||||||  |  ||||||| | |||||||||| ||| |||||    
T  6217820 aaatcattgattgaatttgtgattgactgaagttgatctttcaatatataccaaacgaacaacataacaagacgcaaaatcaaacaacgtcgcac 6217914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 12635269 - 12635175
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||||||||| ||| ||| ||| |||||||||||||  || |||| |||| || | |||| | |||||||||||| |||||||||    
T  12635269 aaatcattgattgaatttgtgatttactaaagttgatctttcaatatgaaccaaatgaacaccactacaaaacgtaaaatcaaacaacgccgcac 12635175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 16262960 - 16262866
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||||| ||| ||| |||| || |||| ||||||||  |||||||||||| || |||||||| |  ||||||||| |||||||||    
T  16262960 aaatcattgattgaatatgtgattgactgcagttgatttttcaatatgaatcaaacgaacaccacaacaagacgcgaaatcaaacaacgccgcac 16262866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 34528831 - 34528745
Alignment:
Q  202 ctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||||||| ||| ||| ||||||| ||||||||||||| ||| ||||  ||| ||| |||||||||  |||||||||    
T  34528831 ctaaatcattgattgaatctgtgattgactgaagttgatctttcaatataaaccaaagaaacaccgaaacaagatgcgaaatcaaac 34528745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 44543380 - 44543279
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| ||| |||||||||||||||||  || | ||||||| |||||| ||||||  ||||||||| |||||    
T  44543380 ttgacgtccaaatcattgattgaatctgtgattgactaaagctgatctttcaatatgaa-ccaacgaacaccgcaataagatgccaaatcaaacaacgcc 44543282  T
Q  295 gca 297  Q
    |||    
T  44543281 gca 44543279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 23291626 - 23291719
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||| ||| ||||||||| |||||||||||||| ||||| || ||||||||||||| ||  |||||||| |||| |||||| |  |||||||||    
T  23291626 ttgatgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaataaacgaacaccgcgacaagaagcgaaatcaaac 23291719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 362 - 415
Target Start/End: Complemental strand, 26535337 - 26535284
Alignment:
Q  362 cttaatatatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 415  Q
    ||||||||||||||||| ||||||||||||||||| |||||||| |||| ||||    
T  26535337 cttaatatatgtgaaaaccacttatttagattgaaagaaaaggagaaaaagatg 26535284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 269
Target Start/End: Original strand, 34413088 - 34413148
Alignment:
Q  209 attgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    ||||||||||||||| |||  ||| |||||||||||||||| ||||||||||||| |||||    
T  34413088 attgattgaatttgtgattgtctggagctgatctttcaatacaaatcaaacgaacaccgca 34413148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 287
Target Start/End: Complemental strand, 18939418 - 18939336
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    |||||||||||| ||| ||||||| ||||||| ||||||||||||| ||| |||| |||| |||||||| || || ||||||||    
T  18939418 aaatcattgattaaatctgtaattgactgaagttgatctttcaata-aaaccaaatgaacaccgcaacaggacgtgaaatcaaa 18939336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 27456646 - 27456555
Alignment:
Q  197 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| ||||||||||||||| |||||||| ||||| |  ||||||||||||| ||  |||||||| |||| |||||| |  |||||||||    
T  27456646 gacgcccaaatcattgattgaacttgtaattgactgatgtcgatctttcaataggaactaaacgaacaccgcgacaagacgcgaaatcaaac 27456555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 34878262 - 34878317
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  34878262 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 34878317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 262
Target Start/End: Original strand, 36775694 - 36775761
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaa 262  Q
    |||||||| |||||||||||||||||||| |||  ||||||| ||||||||||||  || ||||||||    
T  36775694 ttgacgcccaaatcattgattgaatttgtgattgtctgaagccgatctttcaatacgaaccaaacgaa 36775761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 249
Target Start/End: Original strand, 21947546 - 21947656
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||| ||||||| ||||| ||| ||| ||  ||||| | ||  |||||| | ||||||||| |||||||||||||| ||||| |  |    
T  21947546 aaataatatgataaaacttaagtcaccgaaatattcatgcttccggatctgcaacgttgacgtccaaatcattggttgaatttgtaattgactgatgtag 21947645  T
Q  239 atctttcaata 249  Q
    |||||||||||    
T  21947646 atctttcaata 21947656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 31692460 - 31692553
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||| ||||||| ||| ||| ||||| |||||||||||  || | ||||||| ||||||||||| | |||||||||| || ||||||    
T  31692460 aaatcattgattaaatttgttattgactaaagctaatctttcaatatgaa-ccaacgaacaccgcaacaagaagcaaaatcaaacaacaccgcac 31692553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 1742389 - 1742296
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| ||||||||| |||||||||||||| | ||| || ||||||||||||| ||  |||||||| || | |||||| |  |||||||||    
T  1742389 ttgacgcccaaatcattggttgaatttgtaattgattgatgccgatctttcaataggaaataaacgaacaccacgacaagacgcgaaatcaaac 1742296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 7836780 - 7836873
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  |||||||| |||| ||  |||||||| |||| |||||| |  |||||||||    
T  7836780 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcgataggaaataaacgaacgccgcgacaagacgcgaaatcaaac 7836873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 288
Target Start/End: Original strand, 10776389 - 10776538
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    |||||| |||||||||| ||||||| ||||| | | ||| || |||||| | ||  |||||| | ||||||||||||| |||||||||| ||||| |  |    
T  10776389 aaataaaatgataaaacctaagtcaccgaaatactcatgcttctggatctgcaatgttgacgtccaaatcattgattggatttgtaattgactgatgtcg 10776488  T
Q  239 atctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||| || ||  |||||||| |||| |||||| | | ||||||||    
T  10776489 atctttcaaaaggaagtaaacgaacaccgcgacaagacgcacaatcaaac 10776538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 252
Target Start/End: Complemental strand, 14872747 - 14872690
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaa 252  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  |||||||||||||||    
T  14872747 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatagaa 14872690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 197 - 286
Target Start/End: Complemental strand, 45789647 - 45789558
Alignment:
Q  197 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaa 286  Q
    |||||| |||||||||||||||| ||||||| | | ||| |||| ||||||||| || ||||| |||  |||||||| | ||||||||||    
T  45789647 gacgcccaaatcattgattgaatctgtaattgattaaagttgatatttcaataggaaccaaacaaacatcgcaacaacacgtaaaatcaa 45789558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 5983944 - 5983864
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  ||||||||||||| ||  |||| ||| |||| ||||||    
T  5983944 ttgacgcccaaatcattggttgaatttgtaattgactgatgtagatctttcaataggaactaaacaaacaccgcgacaaga 5983864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 132 - 235
Target Start/End: Original strand, 32873784 - 32873888
Alignment:
Q  132 atgtctataaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaattaac 230  Q
    ||||||| ||||||||||||||||   |||| ||||||| |   |||||| |||||| | || |||||||| ||||||||||||| ||| ||||||| ||    
T  32873784 atgtctacaaataatatgataaaatcaaagtgatcgaaatacccatgtttctggatctgcaacattgacgcttaaatcattgattaaatgtgtaattgac 32873883  T
Q  231 tgaag 235  Q
    |||||    
T  32873884 tgaag 32873888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 39888288 - 39888236
Alignment:
Q  197 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata 249  Q
    |||||| ||||||||||||||| |||||||| |||||||  ||||||||||||    
T  39888288 gacgcccaaatcattgattgaagttgtaattgactgaagtcgatctttcaata 39888236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 342
Target Start/End: Complemental strand, 19061008 - 19060870
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-ac 302  Q
    |||| ||||||||||  ||| ||| ||||||||| |||||||||||  || ||| ||||| | |||||||||||| ||||||||| ||||| ||| | ||    
T  19061008 aaattattgattgaacctgtgattgactgaagctaatctttcaatatgaaccaa-cgaacactgcaacaagatgtcaaatcaaacaacgccacacaagac 19060910  T
Q  303 gacatacaagacaacgtggtactcagacgaagaaatcaca 342  Q
    |||  |||| |||| || | ||| |||||| |||||||||    
T  19060909 gacgaacaacacaaggtcgcacttagacgacgaaatcaca 19060870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 28053700 - 28053739
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaa 234  Q
    ||||||||||||| ||||||||||||||||||| ||||||    
T  28053700 ttgacgcctaaataattgattgaatttgtaattgactgaa 28053739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Complemental strand, 1742219 - 1742181
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  1742219 atatatgtgaaaaccacttatttagattgaaagaaaagg 1742181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 395
Target Start/End: Complemental strand, 12635105 - 12635076
Alignment:
Q  366 atatatgtgaaaatcacttatttagattga 395  Q
    ||||||||||||||||||||||||||||||    
T  12635105 atatatgtgaaaatcacttatttagattga 12635076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Original strand, 23291796 - 23291833
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  23291796 atatatgtgaaaaccacttatttagattgaaagaaaag 23291833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 362 - 403
Target Start/End: Complemental strand, 27456484 - 27456443
Alignment:
Q  362 cttaatatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||| ||||| ||||||||||||||||| ||||||    
T  27456484 cttaatatatgcgaaaaccacttatttagattgaaagaaaag 27456443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 271
Target Start/End: Original strand, 30506167 - 30506232
Alignment:
Q  206 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaac 271  Q
    |||||||||||||| || |||| | | |||| ||||||||||||| || ||||||||| |||||||    
T  30506167 atcattgattgaatctgcaattgattcaagccgatctttcaataggaagcaaacgaacaccgcaac 30506232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 289
Target Start/End: Original strand, 40163422 - 40163507
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaact 289  Q
    |||||||||||| ||||| |  || ||||||||||||||| ||||||||| ||||| ||| || ||| |||| |  ||||||||||    
T  40163422 aaatcattgattaaatttttgtttgactgaagctgatcttgcaatagaaaccaaacaaacaccacaataagaggcgaaatcaaact 40163507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 8212063 - 8212107
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaa 410  Q
    ||||||||||||| |||||||||||||| || |||||||| ||||    
T  8212063 atatatgtgaaaaccacttatttagatttaaagaaaaggaaaaaa 8212107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 9687199 - 9687259
Alignment:
Q  238 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    ||||||||||||  ||||||| |||| |||||| ||||||  ||||||||| |||||||||    
T  9687199 gatctttcaatatgaatcaaatgaacaccgcaagaagatgggaaatcaaacaacgccgcac 9687259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 15431650 - 15431682
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaatt 227  Q
    |||||||| ||||||||||||||||||||||||    
T  15431650 ttgacgcccaaatcattgattgaatttgtaatt 15431682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 34413247 - 34413279
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  34413247 tatgtgaaaatcacttatttagattgaaagaaa 34413279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 37720133 - 37720201
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||||||| | ||||||||| |||  |||||| |||||||||||||  || |||||||||    
T  37720133 ttgacgcccaaatcattaaatgaatttgtgattgtctgaagttgatctttcaatacgaaccaaacgaac 37720201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 40163515 - 40163559
Alignment:
Q  229 actgaagctgatctttcaatagaaatcaaacgaactccgcaacaa 273  Q
    ||||||||||||||| ||||||||| ||||| ||| |||||||||    
T  40163515 actgaagctgatcttccaatagaaaccaaacaaacaccgcaacaa 40163559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 48750124 - 48750092
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  48750124 tatgtgaaaatcacttatttagattgaaagaaa 48750092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 3e-24; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 195 - 276
Target Start/End: Original strand, 26716091 - 26716172
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagat 276  Q
    |||||||| |||||||||||||||||| | ||| ||||||||| ||||||||||||||||||||||||| ||||||||||||    
T  26716091 ttgacgccaaaatcattgattgaatttatgattgactgaagctaatctttcaatagaaatcaaacgaacaccgcaacaagat 26716172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 338
Target Start/End: Complemental strand, 35175499 - 35175364
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-ac 302  Q
    |||||||||||||||| ||| ||| ||||||||||||||||||||| ||| ||||||||| |||||||||||  | ||||||||| |||| |||| | ||    
T  35175499 aaatcattgattgaatatgtgattgactgaagctgatctttcaatataaaccaaacgaacaccgcaacaagacatgaaatcaaacaacgctgcacaagac 35175400  T
Q  303 gacatacaagacaacgtggtactcagacgaagaaat 338  Q
    ||   |||| |||| || |||||||||||| |||||    
T  35175399 gatgaacaacacaatgtcgtactcagacgacgaaat 35175364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 19339281 - 19339187
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| ||||||||||||||||||||||||||| ||| ||| |||||||||||||| ||  |||||||| || | |||||| || |||| ||||    
T  19339281 attgacacctaaatcattgattgaatttgtaattgactaaagttgatctttcaataggaactaaacgaacgccacgacaagacgtgaaattaaac 19339187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 21289798 - 21289905
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 290  Q
    ||||| || |||||||||||||||||||| |||  ||||||||||||||||||||  || ||||||||| |||||    | |||||| |||||||||| |    
T  21289798 ttgacaccaaaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgcaaaatcaaacaa 21289897  T
Q  291 cgccgcac 298  Q
    ||||||||    
T  21289898 cgccgcac 21289905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 341
Target Start/End: Complemental strand, 29239438 - 29239300
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-ac 302  Q
    |||||||||||| ||| ||| ||| ||||||||||||||| |||||  || ||||||||| || |||||||| || |||||||||  |||||||| | ||    
T  29239438 aaatcattgattaaatctgtgattgactgaagctgatcttccaatacgaaccaaacgaacaccacaacaagacgtgaaatcaaacagcgccgcacaagac 29239339  T
Q  303 gacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||  |||| ||||||  | |||||||||| ||||||||    
T  29239338 gacgaacaacacaacgccgcactcagacgatgaaatcac 29239300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 51303627 - 51303701
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||||| |||||||||||||||||||| |||  | |||||||||||||||||| ||| ||||||||| |||||    
T  51303627 ttgacgcccaaatcattgattgaatttgtgattgtcagaagctgatctttcaatacaaaccaaacgaacaccgca 51303701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 4821902 - 4821818
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||| |||||||| ||| ||| ||| |||||||||||||||||  || ||||||||| ||||||||||| | ||||||||||    
T  4821902 aaatcatggattgaatatgtgattgactcaagctgatctttcaatatgaaccaaacgaacaccgcaacaagacgcaaaatcaaac 4821818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 283
Target Start/End: Complemental strand, 14859594 - 14859506
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaat 283  Q
    |||||| | |||||||||||||||| ||| ||| | |||||||||||||||||||  || |||| |||| ||||||||||||| |||||    
T  14859594 ttgacgtccaaatcattgattgaatatgtgattgattgaagctgatctttcaatatgaaccaaatgaacaccgcaacaagatgcaaaat 14859506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 20464953 - 20465047
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||| |||||||| ||||||||||||||| ||||||   ||||||||||||| | | ||| |||| |||| |||||| | ||||||||||    
T  20464953 attgacgcccaaatcatttattgaatttgtaattgactgaaatcgatctttcaataggatttaaatgaacaccgcgacaagacgcaaaatcaaac 20465047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 33579984 - 33579891
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata-gaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  |||||||||||| ||||| |||||||| |||| |||||| | ||||||||||    
T  33579984 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatatgaaat-aaacgaacaccgcgacaagacgcaaaatcaaac 33579891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 342
Target Start/End: Complemental strand, 38545903 - 38545758
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  ||||||||||| ||||  |||| ||| |||| |||||| |  |||||||   |||||    
T  38545903 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatggaaaataaacaaacaccgcgacaagacgcgaaatcaa---acgcc 38545807  T
Q  295 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatcaca 342  Q
    |||| | |||||  |||| ||||||| ||||| |||||| |||||||||    
T  38545806 gcacaagacgacgaacaacacaacgtcgtacttagacgacgaaatcaca 38545758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 232
Target Start/End: Original strand, 23799838 - 23799931
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactg 232  Q
    ||||||||||||||||  |||||||| |||| | | ||||||| ||||| | ||  |||||||| |||||||||||||||||||||||| ||||    
T  23799838 aaataatatgataaaatctaagtcattgaaatactcatgttttcggatctgcaacgttgacgccgaaatcattgattgaatttgtaattgactg 23799931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 276
Target Start/End: Original strand, 628916 - 628987
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagat 276  Q
    |||||||||||||||| ||| ||| |||||||||||||||||||||  || | ||||||| ||||||||||||    
T  628916 aaatcattgattgaatctgtgattgactgaagctgatctttcaatatgaa-ccaacgaacaccgcaacaagat 628987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 8914816 - 8914748
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||||||||||||||||||| |||  |||||||| |||||||||||  || |||||||||    
T  8914816 ttgacgcccaaatcattgattgaatttgtgattgtctgaagctaatctttcaatacgaaccaaacgaac 8914748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 287
Target Start/End: Complemental strand, 21313140 - 21313048
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    |||||| | |||||||||||||||||||||||| |||||  | ||| ||||||||||||  |||||||| |||| |||| | || ||||||||    
T  21313140 ttgacgtccaaatcattgattgaatttgtaattgactgataccgatatttcaatagaaactaaacgaacaccgcgacaaaacgtgaaatcaaa 21313048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 275
Target Start/End: Complemental strand, 32246547 - 32246471
Alignment:
Q  199 cgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||| |||||||||||||||| ||| ||||||||||| |||||||||||||| || |||  ||||  ||||||||||    
T  32246547 cgcccaaatcattgattgaatatgtgattaactgaagttgatctttcaataggaaccaagtgaacagcgcaacaaga 32246471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 276
Target Start/End: Complemental strand, 48199872 - 48199800
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagat 276  Q
    |||||||||||| ||||| ||||| | ||||| |||||||||||||| || ||||||||| || |||||||||    
T  48199872 aaatcattgattaaatttataattgattgaagttgatctttcaataggaaccaaacgaacaccacaacaagat 48199800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 53099894 - 53099839
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||||||||||||||| |||||||| ||| | ||||||||||||||||    
T  53099894 ttgacgcccaaatcattgattgaacttgtaattgactcatgctgatctttcaatag 53099839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 212 - 294
Target Start/End: Original strand, 4396335 - 4396417
Alignment:
Q  212 gattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||||| | | ||| ||||||||| |||||||||||  |||||||||||| ||||||||||  | |||||||||| |||||    
T  4396335 gattgaatctatgattgactgaagcttatctttcaatatgaatcaaacgaacaccgcaacaaggcgcaaaatcaaacaacgcc 4396417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 51923831 - 51923757
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||| | |||||||||||||||||||  |||  ||||||||||||||||||||  || ||||||||| |||||    
T  51923831 ttgacgtccaaatcattgattgaatttgcgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgca 51923757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 53508330 - 53508252
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaa 273  Q
    |||||| | |||||||||||||||| ||| |||||||| |  |||||||||||||| || ||||||||| | |||||||    
T  53508330 ttgacgtccaaatcattgattgaatctgtgattaactggatttgatctttcaataggaaccaaacgaacactgcaacaa 53508252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 297
Target Start/End: Original strand, 53807842 - 53807943
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| ||||||| |||||||||||||  || | ||||||| | |||||||||||  ||||||||| | |||    
T  53807842 ttgacgtccaaatcattgattgaatctgtgattgactgaagttgatctttcaatatgaa-ccaacgaacacagcaacaagatgccaaatcaaacaatgcc 53807940  T
Q  295 gca 297  Q
    |||    
T  53807941 gca 53807943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 18011124 - 18011031
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| || | |||||||||| |||| ||| ||| |||  ||||||||||||||||  |||||||| |||  ||||||||| |||||||||    
T  18011124 ttgacgcccaagtgattgattgaaattgttattgactaaagtcgatctttcaatagaaactaaacgaacaccgtgacaagatgtgaaatcaaac 18011031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 275
Target Start/End: Complemental strand, 27856257 - 27856188
Alignment:
Q  206 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||||||||||||||| ||| ||||||| | |||||||||||| || ||||||| | ||||| |||||    
T  27856257 atcattgattgaatttgttatttactgaagttaatctttcaataggaaccaaacgagcaccgcatcaaga 27856188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 31794150 - 31794090
Alignment:
Q  238 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    ||||||||||||  ||||||| |||| ||||||||||||  |||||||||| |||||||||    
T  31794150 gatctttcaatatgaatcaaatgaacaccgcaacaagatagaaaatcaaacaacgccgcac 31794090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 366 - 402
Target Start/End: Complemental strand, 33579803 - 33579767
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaa 402  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33579803 atatatgtgaaaatcacttatttagattgaaagaaaa 33579767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 35864925 - 35865009
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||||||||||||| | ||| |  ||||||||||||| ||  |||||||| |||| | |||| | ||||||||||    
T  35864925 aaatcattgattgaatttgtaattgattgatgtcgatctttcaataggaactaaacgaacaccgcgaaaagacgcaaaatcaaac 35865009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 46304504 - 46304584
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||||||||||||||| |||||||||||||| ||||| |  ||| ||||||||| ||  |||| ||| |||| ||||||    
T  46304504 ttgacgcctaaatcattggttgaatttgtaattgactgatgtagatatttcaataggaactaaacaaacaccgcgacaaga 46304584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 47042032 - 47042087
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||| ||||| |||||||||||| | ||||| ||||||||||||||||    
T  47042032 ttgacgcccaaaccattggttgaatttgtaactgactgatgctgatctttcaatag 47042087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 297
Target Start/End: Complemental strand, 2208939 - 2208838
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    ||||| || ||||||||| |||||| | ||||| ||||||   | |||||||||||||||||||||||| || | |||||||| | |||||||| || ||    
T  2208939 ttgacacccaaatcattg-ttgaatatataattgactgaaatcggtctttcaatagaaatcaaacgaacaccacgacaagatggataatcaaacaacacc 2208841  T
Q  295 gca 297  Q
    |||    
T  2208840 gca 2208838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 396
Target Start/End: Complemental strand, 2342450 - 2342420
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaa 396  Q
    |||||||||||||||||||||||||||||||    
T  2342450 atatatgtgaaaatcacttatttagattgaa 2342420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 7546719 - 7546645
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||||  |||||||||| ||||||||| |||  ||||| ||||||||||||||  || ||||||||| |||||    
T  7546719 ttgacgctcaaatcattgactgaatttgtgattgtctgaaactgatctttcaatacgaaccaaacgaacaccgca 7546645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 393
Target Start/End: Complemental strand, 22290876 - 22290846
Alignment:
Q  363 ttaatatatgtgaaaatcacttatttagatt 393  Q
    |||||||||||||||||||||||||||||||    
T  22290876 ttaatatatgtgaaaatcacttatttagatt 22290846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 27706210 - 27706284
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||||| |||||||||||||||||||| |||     |||||||||||||||||  || ||||||||| |||||    
T  27706210 ttgacgccgaaatcattgattgaatttgtgattgttaaaagctgatctttcaatacgaaccaaacgaacaccgca 27706284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 36461588 - 36461622
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||||||||||||||||| |||||||    
T  36461588 atgtgaaaatcacttatttagattgaaagaaaagg 36461622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 230 - 275
Target Start/End: Complemental strand, 38142604 - 38142558
Alignment:
Q  230 ctgaagctgatcttt-caatagaaatcaaacgaactccgcaacaaga 275  Q
    ||||||||||||||| ||||||||||||||||||| |||||| ||||    
T  38142604 ctgaagctgatcttttcaatagaaatcaaacgaacaccgcaaaaaga 38142558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 45424902 - 45424824
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaa 273  Q
    |||||||| |||||||||||||||||||||||| || || |  ||| ||||||||| ||  |||| ||| |||||||||    
T  45424902 ttgacgcccaaatcattgattgaatttgtaattgaccgatgtcgatttttcaataggaactaaacaaacaccgcaacaa 45424824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Original strand, 47042205 - 47042243
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  47042205 atatatgtgaaaatcacttatttaaattgaaagaaaagg 47042243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 231 - 297
Target Start/End: Complemental strand, 52496995 - 52496929
Alignment:
Q  231 tgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgca 297  Q
    |||||||||||||||||||  |||||||||||| || |||||| | || ||||||||| ||| ||||    
T  52496995 tgaagctgatctttcaataagaatcaaacgaacacctcaacaatacgtgaaatcaaacaacgtcgca 52496929  T

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Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 415
Target Start/End: Original strand, 53808019 - 53808068
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 415  Q
    |||| |||||||||||||||||||||| |||||||| ||| |||| ||||    
T  53808019 atatttgtgaaaatcacttatttagatcgaacgaaagggaaaaaaagatg 53808068  T

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Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 250
Target Start/End: Original strand, 6954679 - 6954735
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    ||||||| | ||||||||| |||||||||||||| ||||| |  |||||||||||||    
T  6954679 attgacgtccaaatcattggttgaatttgtaattgactgatgtagatctttcaatag 6954735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 7887427 - 7887522
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caacaagatgtaaaatcaaac 288  Q
    |||||||| |||||||| || |||| ||| |||  |||||| |||||||||||||| ||  |||||||| |||  ||||||||||  |||||||||    
T  7887427 ttgacgcccaaatcattaatcgaatatgtgattgtctgaagttgatctttcaataggaactaaacgaacaccgcacaacaagatgcgaaatcaaac 7887522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 227
Target Start/End: Complemental strand, 32701595 - 32701563
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaatt 227  Q
    |||||||| ||||||||||||||||||||||||    
T  32701595 ttgacgcccaaatcattgattgaatttgtaatt 32701563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 37040864 - 37040780
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||||||| |||| ||||| || || |   |||||||||||||||  |||||||| |||| |||||| || |||||||||    
T  37040864 aaatcattgattggatttataattgaccgatgtcaatctttcaatagaaactaaacgaacgccgcgacaagacgtgaaatcaaac 37040780  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 402
Target Start/End: Complemental strand, 47896087 - 47896051
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaa 402  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  47896087 atatatgtgaaaaccacttatttagattgaaagaaaa 47896051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 402
Target Start/End: Complemental strand, 53508156 - 53508120
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaa 402  Q
    |||||||||||||||||||||||| |||||| |||||    
T  53508156 atatatgtgaaaatcacttatttatattgaaagaaaa 53508120  T

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Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 38880571 - 38880655
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||  || ||||||||| ||||||||||||| ||||||||||    
T  38880571 aaatcattgattgaatttgtgattgactgaagctgatctttcaataagaaccaaacgaacaccgcaacaagatgcaaaatcaaac 38880655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 195 - 341
Target Start/End: Complemental strand, 28476334 - 28476183
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 290  Q
    |||||||| |||||||||| ||||||||| |||  ||||||||||||||||||||  || ||||||||| |||||    | ||||||  ||||||||| |    
T  28476334 ttgacgcccaaatcattgaatgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgcgaaatcaaacaa 28476235  T
Q  291 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  28476234 cgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 28476183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 341
Target Start/End: Complemental strand, 22743051 - 22742900
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caac--aagatgtaaaatcaaacta 290  Q
    |||||||  |||||||||||||||||||| |||  ||||||||||||||||||||  || ||||||||| |||  ||||  || |||| ||||||||| |    
T  22743051 ttgacgctcaaatcattgattgaatttgtgattggctgaagctgatctttcaatacgaaccaaacgaacgccgcacaactaaaaatgtgaaatcaaacaa 22742952  T
Q  291 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  22742951 cgccgcacaagacgacgaacaacacaacgtcgaactaagacgacgaaatcac 22742900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 37837442 - 37837535
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  ||||||||||||| ||  |||||||| |||| |||||| | ||||||||||    
T  37837442 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaataggaactaaacgaacaccgcgacaagacgcaaaatcaaac 37837535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 207 - 275
Target Start/End: Complemental strand, 22087412 - 22087344
Alignment:
Q  207 tcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||  ||||||| ||| | |||||||||    
T  22087412 tcattgattgaatttgtaattgactgaagttgatctttcaataggtatcaaacaaacacagcaacaaga 22087344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 5348578 - 5348669
Alignment:
Q  197 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| |||||||||||||||| ||||||| | ||||  |||||||||||||| || ||||||||| |||||| |||| |  |||||||||    
T  5348578 gacgcccaaatcattgattgaatctgtaattgattgaaattgatctttcaataggaaccaaacgaacaccgcaataagacgataaatcaaac 5348669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 45349783 - 45349876
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| ||||||||| |||||||||||||| ||||| ||  |||||||||||| ||  |||||||| |||| |||||| |  |||||||||    
T  45349783 ttgacgccaaaatcattgcttgaatttgtaattgactgatgccaatctttcaataggaactaaacgaacaccgcgacaagacgcgaaatcaaac 45349876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 287
Target Start/End: Original strand, 25287114 - 25287262
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||  ||||||| ||||| ||  ||| |||  |||| |||| ||||||||  |||||||||||||||||||||||| | ||| |       
T  25287114 aaataatatgataaaatctaagtcaccgaaatatccatgctttcagatctgtaatattgacgctcaaatcattgattgaatttgtaattgattgatgtca 25287213  T
Q  239 atctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    |||||||||||  ||  ||| |||| |||| ||||||||| ||||||||    
T  25287214 atctttcaataagaagtaaatgaacaccgcgacaagatgtgaaatcaaa 25287262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 35133054 - 35132986
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||||||||||||||||||| |||  |||||| |||||||||||||  || |||||||||    
T  35133054 ttgacgcccaaatcattgattgaatttgtgattgtctgaagttgatctttcaatacgaaccaaacgaac 35132986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 1749140 - 1749199
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||||||||||||||| |||  ||||||||||||||||||||  || |||||||||    
T  1749140 aaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaac 1749199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 9977190 - 9977245
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||||||||| |||||||||||||| |||||||  |||||||||||||    
T  9977190 ttgacgcccaaatcattgtttgaatttgtaattgactgaagtcgatctttcaatag 9977245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 341
Target Start/End: Original strand, 24350823 - 24350972
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 290  Q
    |||||||| |||||||||||||||||||| |||   |||||||||||||||||||  || ||||||||| | |||    | || |||| ||||||||| |    
T  24350823 ttgacgcccaaatcattgattgaatttgtgatt--gtgaagctgatctttcaatacgaaccaaacgaacactgcacaacaaaaaatgtgaaatcaaacaa 24350920  T
Q  291 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  24350921 cgccgcacaagacgacgaacaacacaacgtcgcactaagacgacgaaatcac 24350972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 26623784 - 26623867
Alignment:
Q  206 atcattgattgaatttgtaattaac-tgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| ||||||| || |||| || ||||| |||||||||||||| || ||||| ||| ||||||||||||| ||||||||||    
T  26623784 atcattaattgaatatgcaattgacctgaagttgatctttcaataggaaccaaacaaacaccgcaacaagatgcaaaatcaaac 26623867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 38798888 - 38798833
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  38798888 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 38798833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 39328774 - 39328829
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  39328774 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 39328829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 341
Target Start/End: Original strand, 44311776 - 44311922
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    ||||| || |||| ||||||||||||||||||| ||| |||| ||||||| |||||||| ||||| || | | |||||| |||| ||||||||| ||| |    
T  44311776 ttgacacccaaattattgattgaatttgtaattgacttaagccgatcttttaatagaaaccaaac-aaatacacaacaaaatgtgaaatcaaacaacgtc 44311874  T
Q  295 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||  | |||||  |||| ||||||  | |||||||||| ||||||||    
T  44311875 gcagaagacgacgaacaatacaacgacgcactcagacgatgaaatcac 44311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 4530180 - 4530090
Alignment:
Q  198 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||||| | |||||||||||||| | ||||||| ||||||||||| || ||  ||  |||| ||||||||||| | ||||||||||    
T  4530180 acgcctaaatcttggattgaatttgtaactgactgaagttgatctttcaacagtaactaattgaacaccgcaacaagacgcaaaatcaaac 4530090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 19404740 - 19404834
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||| |||||||||||||||||||||||| || || |   ||||||||| || ||  ||| |||| |||| |||||||| ||||||||||    
T  19404740 attgacgcccaaatcattgattgaatttgtaattgacagatgtcaatctttcaagaggaactaaaagaacaccgcgacaagatgcaaaatcaaac 19404834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 31482082 - 31482172
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| |||||||||||||||  ||  ||| | |||||||| | |||||||||||||||||||||| |||||| |||| || |||||||||    
T  31482082 ttgacgcc-aaatcattgattgaaagtg--attgagtgaagctgttttttcaatagaaatcaaacgaacaccgcaataagacgtgaaatcaaac 31482172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 24770353 - 24770273
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaat-agaaatcaaacgaactccgcaacaaga 275  Q
    |||||||| ||||||||| |||||||||| ||| ||||| || ||||||||||| |||||| |||||||| |||| ||||||    
T  24770353 ttgacgcccaaatcattggttgaatttgtgattgactgatgccgatctttcaataagaaat-aaacgaacaccgcgacaaga 24770273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 39229119 - 39229055
Alignment:
Q  197 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacga 261  Q
    |||||| || |||| | |||||| ||||||| ||||||| ||||||||||||||||| |||||||    
T  39229119 gacgcccaagtcatcggttgaatctgtaattgactgaagttgatctttcaatagaaaccaaacga 39229055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 5792963 - 5792929
Alignment:
Q  136 ctataaataatatgataaaacataagtcatcgaaa 170  Q
    |||||||||||||||||||| ||||||||||||||    
T  5792963 ctataaataatatgataaaatataagtcatcgaaa 5792929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 9450294 - 9450328
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||||||||||||||||| |||||||    
T  9450294 atgtgaaaatcacttatttagattgaaagaaaagg 9450328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 19404911 - 19404957
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 415  Q
    |||||||||| ||||||||||||||||| |||||||| |||| ||||    
T  19404911 tatgtgaaaaccacttatttagattgaaagaaaaggaaaaaaagatg 19404957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 24069387 - 24069481
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||||  ||| ||| |  ||||||||| ||||||||  |||||||||||| ||||||||| | |  ||||||||  |||||||||    
T  24069387 aaatcattgattgaacctgtgattgatcgaagctgatatttcaatatgaatcaaacgaacaccgcaacaatacgccaaatcaaaaaacgccgcac 24069481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 415
Target Start/End: Original strand, 24351000 - 24351046
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 415  Q
    |||||||||||||||||||||||||||| |||| ||| |||| ||||    
T  24351000 tatgtgaaaatcacttatttagattgaaagaaagggaaaaaaggatg 24351046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 30756976 - 30757010
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||||||||||||||||| |||||||    
T  30756976 atgtgaaaatcacttatttagattgaaagaaaagg 30757010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 404
Target Start/End: Original strand, 37837608 - 37837650
Alignment:
Q  362 cttaatatatgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||| ||| ||||||||||||||||| |||||||    
T  37837608 cttaatatatgtgtaaaccacttatttagattgaaagaaaagg 37837650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Complemental strand, 42978547 - 42978509
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  42978547 atatatgtgaaaaccacttatttagattgatcgaaaagg 42978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 369 - 410
Target Start/End: Original strand, 1749300 - 1749341
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaaaggacaaaa 410  Q
    |||||||||||||||||||||||||||| |||| ||| ||||    
T  1749300 tatgtgaaaatcacttatttagattgaaagaaagggaaaaaa 1749341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Complemental strand, 24770192 - 24770155
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  24770192 atatatgtgaaaaccacttatttagattgaaagaaaag 24770155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 288
Target Start/End: Complemental strand, 46700202 - 46700049
Alignment:
Q  136 ctataaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaat-tgacgcctaaatcattgattgaatttgtaattaactgaa 234  Q
    ||||||||||||||||||||  ||||||| ||||| ||  ||| ||  ||||| | ||   ||| ||| ||||||||||||||||||||| || |||||     
T  46700202 ctataaataatatgataaaatctaagtcaccgaaatatccatgcttccggatctgcaacgctgatgcccaaatcattgattgaatttgtagttgactgat 46700103  T
Q  235 gctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |  ||| ||||||||| ||  |||||||| || | |||||| || |||||||||    
T  46700102 gtcgatatttcaataggaactaaacgaacaccacgacaagacgtgaaatcaaac 46700049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 47590418 - 47590325
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| ||||||||| |||||||||||||| || || |  ||||||||||||| ||| | || ||| ||||  ||||| | ||||||||||    
T  47590418 ttgacgcccaaatcattggttgaatttgtaattgacggatgtagatctttcaataggaattatacaaacaccgcggcaagacgcaaaatcaaac 47590325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 11343917 - 11343837
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||| | |||||||| ||| ||||||||||| ||||||  | |||||||||||  || ||||| ||| |||||||||||    
T  11343917 ttgacgtccaaatcattaattaaatttgtaattgactgaatttaatctttcaatatgaaccaaacaaacaccgcaacaaga 11343837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 22742872 - 22742840
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  22742872 tatgtgaaaatcacttatttagattgaaagaaa 22742840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 402
Target Start/End: Original strand, 25287335 - 25287375
Alignment:
Q  362 cttaatatatgtgaaaatcacttatttagattgaacgaaaa 402  Q
    ||||||||| |||||||||||||||||||||| || |||||    
T  25287335 cttaatatacgtgaaaatcacttatttagattaaaagaaaa 25287375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 27997192 - 27997105
Alignment:
Q  198 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||| |||||||||| | ||||| ||||| |   ||| |||||||||||||  |||||||||||| | ||||||||||| ||||| ||||    
T  27997192 acgcccaaatcattgacttaatttataattga---aagttgatctttcaatatgaatcaaacgaacactgcaacaagatgcaaaataaaac 27997105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 28476155 - 28476123
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  28476155 tatgtgaaaatcacttatttagattgaaagaaa 28476123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 48930714 - 48930682
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  48930714 tatgtgaaaatcacttatttagattgaaagaaa 48930682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 30400020 - 30400112
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    |||||||| |||||||||||||||||||||||| ||||||| |||||||||||||| ||  |||||||| |||| ||| |||| |||||||||    
T  30400020 ttgacgcccaaatcattgattgaatttgtaattgactgaagttgatctttcaataggaactaaacgaacaccgcgacacgatgcaaaatcaaa 30400112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 17151536 - 17151445
Alignment:
Q  197 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| |||||||||||||||| ||||||| ||||||  |||||||||||||| |||||||||||| ||| |||||||||  |||||||||    
T  17151536 gacgcccaaatcattgattgaatctgtaattgactgaaattgatctttcaataggaatcaaacgaacaccgtaacaagatgcgaaatcaaac 17151445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 28871775 - 28871866
Alignment:
Q  197 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||||| |||||| ||||||| ||||||| |||||||||||||| || ||||||||| |||| |||||| |  |||||||||    
T  28871775 gacgcctaaatcattggttgaatctgtaattgactgaagttgatctttcaataggaaccaaacgaacaccgcgacaagacgcgaaatcaaac 28871866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 41327618 - 41327525
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| | ||||||||| |||||||||||||| ||||||   |||||||||||||||| ||||||||| ||||||||| | || |||||||||    
T  41327618 ttgacgtccaaatcattggttgaatttgtaattgactgaaatagatctttcaatagaaaccaaacgaacaccgcaacaatacgtgaaatcaaac 41327525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 342
Target Start/End: Original strand, 32448604 - 32448751
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| |||||||||||||||||||||  || | ||||||| |||||||||||||  ||||||||| ||| |    
T  32448604 ttgacgtccaaatcattgattgaatctgtgattgactgaagctgatctttcaatatgaa-ccaacgaacaccgcaacaagatgccaaatcaaacaacggc 32448702  T
Q  295 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatcaca 342  Q
    |||| | |||||  |||| |||| || | ||| |||||| |||||||||    
T  32448703 gcacaagacgacgaacaacacaaggtcgcacttagacgacgaaatcaca 32448751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 28533939 - 28534042
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||| ||||||| ||| ||| | |||||||  ||||||||||| |||||||||||| |||||||||||| | ||||||||| ||| |    
T  28533939 ttgacgtccaaatcatttattgaatctgtgattgagtgaagcttgtctttcaataggaatcaaacgaacaccgcaacaagatttgaaatcaaacaacgtc 28534038  T
Q  295 gcac 298  Q
    ||||    
T  28534039 gcac 28534042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 29574622 - 29574716
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||||| ||| ||| ||||||||| |||||||||||  |||||||| ||| | ||||||| |||| ||||||||| | |||||||    
T  29574622 aaatcattgattgaatctgtgattgactgaagctaatctttcaatatgaatcaaacaaacactgcaacaaaatgtgaaatcaaacaatgccgcac 29574716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 36175481 - 36175561
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||| | |||||||||||||||| |||||||   ||| | ||||||||||||||||| ||||||||| |||||||||||    
T  36175481 ttgacgtccaaatcattgattgaatatgtaattgtttgatgttgatctttcaatagaaaccaaacgaacaccgcaacaaga 36175561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 12554175 - 12554242
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaac 271  Q
    |||||||||||||||| ||||||| ||||||| |||| ||||||||  |||||||||||| |||||||    
T  12554175 aaatcattgattgaatctgtaattgactgaagttgatatttcaatatgaatcaaacgaacaccgcaac 12554242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 17249132 - 17249234
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| |||||| ||||||||||||||  || | ||| ||| |||||||||||||  |||| ||||||||||    
T  17249132 ttgacgtccaaatcattgattgaatctgtgattgactgaaactgatctttcaatatgaa-ccaacaaacaccgcaacaagatgccaaataaaactacgcc 17249230  T
Q  295 gcac 298  Q
    ||||    
T  17249231 gcac 17249234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 23933604 - 23933707
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||| ||||||||||| ||| ||| ||||||| ||| |||||||||  || ||||||||| ||||||||||||| ||| |||||| || ||    
T  23933604 ttgacgtccaaataattgattgaatctgtgattgactgaagttgaactttcaataagaaccaaacgaacaccgcaacaagatgcaaattcaaacaacacc 23933703  T
Q  295 gcac 298  Q
    ||||    
T  23933704 gcac 23933707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 198 - 341
Target Start/End: Complemental strand, 3309057 - 3308909
Alignment:
Q  198 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caacaa--gatgtaaaatcaaactacgc 293  Q
    ||||| |||||||||||||||||||| |||  |||||| |||| |||||||| ||| ||||||||| |||  ||||||  ||||  ||||||||| ||||    
T  3309057 acgcccaaatcattgattgaatttgtgattgtctgaagttgatatttcaatacaaaccaaacgaacaccgcacaacaaaggatgctaaatcaaacaacgc 3308958  T
Q  294 cgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    ||||| | |||||| | || ||||||| | ||| |||||| ||||||||    
T  3308957 cgcacaagacgacaaataacacaacgtcgcactaagacgacgaaatcac 3308909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 4264588 - 4264494
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| ||||||||||||||| ||| ||||||| ||||||| |||||||||||||  || |||| |||| |||||| |||| |  |||||||||    
T  4264588 attgactcctaaatcattgattaaatctgtaattgactgaagttgatctttcaataagaaccaaatgaacaccgcaataagacgcgaaatcaaac 4264494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 288
Target Start/End: Complemental strand, 6436723 - 6436629
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||| | |||||||||||||||| | | ||| |||||||||||||||||| ||  || || |||||| ||| ||||||||| ||||||||||    
T  6436723 attgacgtccaaatcattgattgaatatttgattgactgaagctgatctttcattatgaaccagacgaacaccgtaacaagatgcaaaatcaaac 6436629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 209 - 299
Target Start/End: Complemental strand, 11812784 - 11812694
Alignment:
Q  209 attgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcact 299  Q
    ||||||||||| ||||||  ||||||||||||||||| |||| |||||||  ||| |||||||||||   |||||||||| ||| ||||||    
T  11812784 attgattgaatctgtaatcgactgaagctgatctttctataggaatcaaataaacaccgcaacaagacacaaaatcaaacaacgtcgcact 11812694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 132 - 288
Target Start/End: Original strand, 4904066 - 4904223
Alignment:
Q  132 atgtctataaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaac 230  Q
    ||||||| ||||||||||||||||  ||||||| ||||| ||  ||| || |||||| | ||  ||||| || |||||||   |||||||||||||| ||    
T  4904066 atgtctacaaataatatgataaaatctaagtcaccgaaatatccatgcttctggatctgcaacgttgacacccaaatcatcagttgaatttgtaattgac 4904165  T
Q  231 tgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||| |  ||||||||||||  || ||||||||| |||||||||||   ||||||||||    
T  4904166 tgatgtcgatctttcaatatgaaccaaacgaacaccgcaacaagacacaaaatcaaac 4904223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 25509053 - 25509146
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| | |||||||||||||||||||||| ||||| | |||||||||||| | ||  |||||||| |||| ||||||   ||||||||||    
T  25509053 ttgacgcccagatcattgattgaatttgtaattgactgatgttgatctttcaatgggaactaaacgaacaccgcgacaagacacaaaatcaaac 25509146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 10237201 - 10237269
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||| | |||||||||||||||||||| |||  ||||||||||||||||||||  || |||||||||    
T  10237201 ttgacgtccaaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaac 10237269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 247
Target Start/End: Original strand, 29279499 - 29279607
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||  ||||||| ||||||| | ||||||  ||||| | || ||||||||  |||||||||||||||||||||||  ||||| | ||    
T  29279499 aaataatatgataaaatttaagtcaccgaaaaactcatgtttccggatctgcaacattgacgcacaaatcattgattgaatttgtaatcgactgatgttg 29279598  T
Q  239 atctttcaa 247  Q
    ||| |||||    
T  29279599 atcattcaa 29279607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 31128765 - 31128845
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    ||||||||||||||||||||||||||||||||| |||||    ||| ||||||||| ||  |||||||| |||| ||||||    
T  31128765 ttgacgcctaaatcattgattgaatttgtaattgactgatatcgatttttcaataggaactaaacgaacaccgcgacaaga 31128845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 1415672 - 1415617
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  1415672 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 1415617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 275
Target Start/End: Complemental strand, 10929771 - 10929700
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||||||||||||| ||| ||| |||||||||||| |||||| |  || ||||||||| |||||||||||    
T  10929771 aaatcattgattgaatctgtgattgactgaagctgatttttcaacatgaaccaaacgaacaccgcaacaaga 10929700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 275
Target Start/End: Original strand, 33760187 - 33760258
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||||||||||| | | ||||| ||||||| |||||||||||||  |||||||||||| | |||||||||    
T  33760187 aaatcattgattgagtctataattgactgaagttgatctttcaatatgaatcaaacgaacactgcaacaaga 33760258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 253
Target Start/End: Original strand, 12677435 - 12677493
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 253  Q
    |||||||| ||||||||| |||||||||||||| ||| | || ||||||||||||||||    
T  12677435 ttgacgcccaaatcattggttgaatttgtaattgacttatgccgatctttcaatagaaa 12677493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 19062280 - 19062389
Alignment:
Q  139 taaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagct 237  Q
    |||||||||||||||||| ||||||| ||||| |   ||| ||| ||||| | ||  |||||| | |||||||||||||||||||||||| ||||| |      
T  19062280 taaataatatgataaaacttaagtcaccgaaatacccatgctttcggatctgaaacgttgacgtccaaatcattgattgaatttgtaattgactgatgta 19062379  T
Q  238 gatctttcaa 247  Q
    ||||||||||    
T  19062380 gatctttcaa 19062389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 259
Target Start/End: Original strand, 10792862 - 10792914
Alignment:
Q  207 tcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaac 259  Q
    ||||||||||||||||||||| | |||||||  |||||||||| |||||||||    
T  10792862 tcattgattgaatttgtaattcagtgaagctagtctttcaataaaaatcaaac 10792914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 247
Target Start/End: Complemental strand, 41694736 - 41694684
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaa 247  Q
    |||| ||| |||||||||||||||| |||||||  ||||||||||||||||||    
T  41694736 ttgatgcccaaatcattgattgaatatgtaattggctgaagctgatctttcaa 41694684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 365 - 396
Target Start/End: Complemental strand, 4192805 - 4192774
Alignment:
Q  365 aatatatgtgaaaatcacttatttagattgaa 396  Q
    ||||||||||||||||||||||||||||||||    
T  4192805 aatatatgtgaaaatcacttatttagattgaa 4192774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 19028899 - 19028954
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||  ||||||||||||||||||||| || |||||||  |||||||||||||    
T  19028899 ttgacgctcaaatcattgattgaatttgtacttgactgaagtcgatctttcaatag 19028954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 288
Target Start/End: Complemental strand, 19597980 - 19597901
Alignment:
Q  209 attgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||| ||||||| ||||||||||| || ||||||||||  ||||||||||||  | ||||||||   ||||||||||    
T  19597980 attgattaaatttgtgattaactgaagttggtctttcaataagaatcaaacgaacatcacaacaagacacaaaatcaaac 19597901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 33923820 - 33923765
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||||||||| |||||||||||||| ||||| |  |||||||||||||    
T  33923820 ttgacgcccaaatcattggttgaatttgtaattgactgatgtcgatctttcaatag 33923765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 35220440 - 35220385
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||||||||| |||||||||||||  ||||| | ||||||||||||||    
T  35220440 ttgacgcccaaatcattggttgaatttgtaatggactgatgttgatctttcaatag 35220385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 229 - 288
Target Start/End: Complemental strand, 37994360 - 37994301
Alignment:
Q  229 actgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||| ||||||||  ||||||| |||| | ||||||||||| ||||||||||    
T  37994360 actgaagctgatttttcaatatgaatcaaatgaacactgcaacaagatgcaaaatcaaac 37994301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 14955644 - 14955570
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||||  |||||||||||||||||| | |||| |||||| |||| ||||||||  || ||||||||| |||||    
T  14955644 ttgacgctcaaatcattgattgaatttatgattatctgaagatgatatttcaatatgaaccaaacgaacaccgca 14955570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 24461549 - 24461479
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaag 274  Q
    ||||||| |||||||| |||  || ||||||| |||||||||||||  || ||||||||| ||||||||||    
T  24461549 aaatcatcgattgaatctgtggttgactgaagttgatctttcaatatgaaccaaacgaacaccgcaacaag 24461479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Original strand, 43397274 - 43397312
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  43397274 atatatgtgaaaaccacttatttagattgaaagaaaagg 43397312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Original strand, 12648078 - 12648115
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  12648078 atatatgtggaaatcacttatttagattgaaagaaaag 12648115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 14423440 - 14423347
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| | |||||||||||| ||| ||||||| ||| |||  ||||||||||||  || ||||| ||| |||||| || |||| |||||||||    
T  14423440 ttgacgtccaaatcattgattaaatctgtaattgactaaagtcgatctttcaataagaaccaaacaaacaccgcaataaaatgtgaaatcaaac 14423347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Original strand, 28227839 - 28227876
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  28227839 atatttgtgaaaatcacttatttagattgaaagaaaag 28227876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Original strand, 29279724 - 29279761
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  29279724 atatatgtgaaaaccacttatttagattgaaagaaaag 29279761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Original strand, 31128933 - 31128970
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  31128933 atatatgtgaaaaccacttatttagattgaaagaaaag 31128970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 36691989 - 36691896
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| | ||||||||| |||||||||||||| || || |   |||||||| ||||||  |||||||| |||| ||||||||  |||||||||    
T  36691989 ttgacgtccaaatcattgcttgaatttgtaattgaccgatgtcaatctttcagtagaaactaaacgaacaccgcgacaagatgcgaaatcaaac 36691896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 42698695 - 42698744
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 253  Q
    |||||| ||||||||||||||||| ||||| |  ||||||||||||||||    
T  42698695 aaatcactgattgaatttgtaattcactgatgtcgatctttcaatagaaa 42698744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 7646580 - 7646536
Alignment:
Q  203 taaatcattgattgaatttgtaattaactgaagctgatctttcaa 247  Q
    ||||||||||||||||||||||||| ||||| |  ||||||||||    
T  7646580 taaatcattgattgaatttgtaattgactgatgtagatctttcaa 7646536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 10237370 - 10237402
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  10237370 tatgtgaaaatcacttatttagattgaaagaaa 10237402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 18763583 - 18763515
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||| |||| |||||||||||||| | ||| || ||||||||||||| ||  ||||||||    
T  18763583 ttgacgcccaaatgattggttgaatttgtaattgattgatgccgatctttcaataggaactaaacgaac 18763515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 402
Target Start/End: Original strand, 29574787 - 29574823
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaa 402  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  29574787 atatatgtggaaatcacttatttagattgaaagaaaa 29574823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 402
Target Start/End: Complemental strand, 31788398 - 31788366
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaa 402  Q
    ||||||||||||||||||||||||||| |||||    
T  31788398 atgtgaaaatcacttatttagattgaaagaaaa 31788366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 194 - 298
Target Start/End: Original strand, 34128668 - 34128772
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgc 293  Q
    ||||||||| |||| ||||||||||||| ||||  ||| |||  ||||||| ||||| || ||||| ||| || |||||||| | | |||||||| |||     
T  34128668 attgacgcccaaataattgattgaatttataatcgactaaagtcgatcttttaataggaaccaaacaaacaccacaacaagacgcacaatcaaacaacgt 34128767  T
Q  294 cgcac 298  Q
    |||||    
T  34128768 cgcac 34128772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 34599073 - 34599013
Alignment:
Q  238 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    ||||||||||||  ||||||| |||| |||||  |||||| |||||||||| |||||||||    
T  34599073 gatctttcaatatgaatcaaatgaacaccgcacgaagatggaaaatcaaacaacgccgcac 34599013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 48; Significance: 3e-18; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 5333536 - 5333433
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||||| |||| ||||||||||| ||| ||| ||||||| |||||||||||||| || ||||||||| ||| ||||||| | |||||||||| || ||    
T  5333536 ttgacgcccaaataattgattgaatatgtgattgactgaagttgatctttcaataggaaccaaacgaacaccggaacaagacgcaaaatcaaacaacacc 5333437  T
Q  295 gcac 298  Q
    ||||    
T  5333436 gcac 5333433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 15344415 - 15344313
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| ||||||  |||||||||||||  || ||| ||||| |||||||||||||| |||||||||||||||    
T  15344415 ttgacgtccaaatcattgattgaatctgtgattgactgaacttgatctttcaatatgaaccaa-cgaacaccgcaacaagatgtcaaatcaaactacgcc 15344317  T
Q  295 gcac 298  Q
    ||||    
T  15344316 gcac 15344313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 15433480 - 15433378
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| ||||||  |||||||||||||  || ||| ||||| |||||||||||||| |||||||||||||||    
T  15433480 ttgacgtccaaatcattgattgaatctgtgattgactgaacttgatctttcaatatgaaccaa-cgaacaccgcaacaagatgtcaaatcaaactacgcc 15433382  T
Q  295 gcac 298  Q
    ||||    
T  15433381 gcac 15433378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 15524784 - 15524682
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| ||||||  |||||||||||||  || ||| ||||| |||||||||||||| |||||||||||||||    
T  15524784 ttgacgtccaaatcattgattgaatctgtgattgactgaacttgatctttcaatatgaaccaa-cgaacaccgcaacaagatgtcaaatcaaactacgcc 15524686  T
Q  295 gcac 298  Q
    ||||    
T  15524685 gcac 15524682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 195 - 341
Target Start/End: Complemental strand, 41896624 - 41896473
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 290  Q
    |||| |||||||||||| ||||||||||| |||  ||||||||||||||||||||  || ||||||||| |||||    | || |||| ||||||||| |    
T  41896624 ttgatgcctaaatcattaattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgcacaacaaaatatgtgaaatcaaacaa 41896525  T
Q  291 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||||||| | |||||  |||| ||||||| ||||| |||||| ||||||||    
T  41896524 cgccgcacaagacgaccaacaacacaacgtcgtactaagacgatgaaatcac 41896473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 33347505 - 33347595
Alignment:
Q  197 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||  |||||| |||| |||||||||||  | |||||||||    
T  33347505 gacgcctaaatcattgattgaatctgtgattgactgaagttgatctttcaatag-gatcaaatgaacaccgcaacaagacatgaaatcaaac 33347595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 288
Target Start/End: Original strand, 17693540 - 17693689
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||||||||||||||||| | | ||| ||  ||||| | ||  |||||||| ||||||||| |||||||||||||| ||||| |  |    
T  17693540 aaataatatgataaaacataagtcatcgaaatactcatgcttccggatctgcaatgttgacgcccaaatcattggttgaatttgtaattgactgatgtcg 17693639  T
Q  239 atctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| ||||| ||  |||| ||| |||| |||| | | ||||||||||    
T  17693640 atcttttaataggaactaaacaaacaccgcgacaaaacgcaaaatcaaac 17693689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 1236690 - 1236781
Alignment:
Q  206 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||  || | ||||||| |||||||||||||  ||||||||| |||||||||    
T  1236690 atcattgattgaatatgtgattgactgaagttgatctttcaatatgaa-ccaacgaacaccgcaacaagatgccaaatcaaacaacgccgcac 1236781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 206 - 298
Target Start/End: Original strand, 1239390 - 1239481
Alignment:
Q  206 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||| ||| ||| ||||||| |||||||||||||  || | ||||||| |||||||||||||  ||||||||| |||||||||    
T  1239390 atcattgattgaatatgtgattgactgaagttgatctttcaatatgaa-ccaacgaacaccgcaacaagatgccaaatcaaacaacgccgcac 1239481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 18890681 - 18890749
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||||||||||||||||||| |||  ||||||||||||||||||||  || |||||||||    
T  18890681 ttgacgcccaaatcattgattgaatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaac 18890749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 41060252 - 41060324
Alignment:
Q  216 gaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||| |||||||||  |||||||| || |||||||||| ||||||||||| | ||||||||||    
T  41060252 gaatttgtaattaagtgaagctgaattttcaatataagtcaaacgaacaccgcaacaagaagcaaaatcaaac 41060324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 195 - 340
Target Start/End: Original strand, 45445793 - 45445936
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||||| ||||||||| |||||||||||||| ||||| || ||||||||||||| ||  |||| ||| |||| |||| |||  |||||||   |||||    
T  45445793 ttgacgcccaaatcattggttgaatttgtaattgactgatgccgatctttcaataggaaataaacaaacaccgcgacaaaatgcgaaatcaa---acgcc 45445889  T
Q  295 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatca 340  Q
    |||| | |||||  |||| ||||||| ||||| |||||| |||||||    
T  45445890 gcacaagacgacgaacaatacaacgtcgtacttagacgacgaaatca 45445936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 29617256 - 29617359
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| ||||||| || ||||||||||  || ||||||||| ||||||||||| |  |||||||||  ||||    
T  29617256 ttgacgtccaaatcattgattgaatctgtgattgactgaagttggtctttcaataagaaccaaacgaacaccgcaacaagacgcgaaatcaaacagcgcc 29617355  T
Q  295 gcac 298  Q
    ||||    
T  29617356 gcac 29617359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 33214589 - 33214708
Alignment:
Q  132 atgtctataaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaattaac 230  Q
    ||||||| |||||||||||||||||||||||||||||||     ||| ||  ||||| | ||  |||| ||| ||||||||| |||||||||||||| ||    
T  33214589 atgtctaaaaataatatgataaaacataagtcatcgaaattcacatgcttccggatctgcaacgttgaagcccaaatcattggttgaatttgtaattgac 33214688  T
Q  231 tgaagctgatctttcaatag 250  Q
    ||| || |||||||||||||    
T  33214689 tgacgccgatctttcaatag 33214708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 194 - 249
Target Start/End: Complemental strand, 42046329 - 42046274
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata 249  Q
    ||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||    
T  42046329 attgacgcccaaatcattgattgaatttgtgattgtctgaagctgatctttcaata 42046274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 288
Target Start/End: Original strand, 16247204 - 16247298
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||| ||| |||||||||||||||||||||||||| ||| |  |||||||| |||| ||  |||||||| |||| |||||| || |||||||||    
T  16247204 attgatgcccaaatcattgattgaatttgtaattaattgatgtcgatctttccataggaactaaacgaacaccgcgacaagacgtgaaatcaaac 16247298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 18847120 - 18847189
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    ||||||||  |||||||||||||||| || |||||||||| ||||| |||||||||| || |||||||||    
T  18847120 attgacgctcaaatcattgattgaatctgcaattaactgatgctgacctttcaataggaaccaaacgaac 18847189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 299
Target Start/End: Complemental strand, 8981270 - 8981166
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||  ||||||| ||| ||| ||||| |||||||||||||||  || ||||||||| ||||||||||| |  ||||||||  |||||    
T  8981270 ttgacgtccaaatcatcaattgaatctgtgattgactgacgctgatctttcaatatcaaacaaacgaacaccgcaacaagacgcgaaatcaaaaaacgcc 8981171  T
Q  295 gcact 299  Q
    |||||    
T  8981170 gcact 8981166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 341
Target Start/End: Original strand, 20227263 - 20227409
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    ||||| || |||| ||||||||||||||||||| ||| |||| ||||||| |||||||| ||||| || | | |||||| |||| ||||||||| ||| |    
T  20227263 ttgacacccaaattattgattgaatttgtaattgacttaagccgatcttttaatagaaaccaaac-aaatacacaacaaaatgtgaaatcaaacaacgtc 20227361  T
Q  295 gcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||  | |||||  |||| ||||||  | |||||||||| ||||||||    
T  20227362 gcagaagacgacgaacaatacaacgacgcactcagacgatgaaatcac 20227409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 28086804 - 28086847
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaa 247  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  28086804 aaatcattgattgaatttgtaattaactgaagtcgatctttcaa 28086847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 341
Target Start/End: Complemental strand, 39657561 - 39657410
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca----acaagatgtaaaatcaaacta 290  Q
    |||||| | |||||||||||||||||| | |||  |||||||| |||||||||||  || ||||||||| |||||    | ||||||  ||||||||| |    
T  39657561 ttgacgtccaaatcattgattgaatttatgattgtctgaagctaatctttcaatacgaaccaaacgaacaccgcacaacaaaagatgcgaaatcaaacaa 39657462  T
Q  291 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  39657461 cgccgcacaagacgacgaacaatacaacgtcgcactaagacgacgaaatcac 39657410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 275
Target Start/End: Original strand, 7677209 - 7677345
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||| ||||||| ||||| ||| ||| ||  ||||| | ||  |||||||  ||||||||| | |||| ||||||| ||||| | ||    
T  7677209 aaataatatgataaaacctaagtcaccgaaatattcatgcttccggatctgcaacgttgacgctcaaatcattggtcgaatctgtaattgactgatgttg 7677308  T
Q  239 atctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    || ||||| ||| || ||||||||| |||| ||||||    
T  7677309 atatttcagtaggaaccaaacgaacaccgcgacaaga 7677345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 27498347 - 27498414
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||||||| ||||||||||| | ||||||||| |||||||||||||| ||| ||| ||||    
T  27498347 ttgacgcccaaatcattaattgaatttgt-actaactgaagttgatctttcaataggaattaaatgaac 27498414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 198 - 275
Target Start/End: Complemental strand, 34609940 - 34609860
Alignment:
Q  198 acgcctaaatcattgattgaatttgta----attaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    ||||| ||||||||||||| |||||||    ||| ||||||| |||||||||||| |||| ||||||||| |||||||||||    
T  34609940 acgcccaaatcattgattgcatttgtaactgattgactgaagttgatctttcaatggaaa-caaacgaacaccgcaacaaga 34609860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 201 - 288
Target Start/End: Original strand, 36948425 - 36948512
Alignment:
Q  201 cctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||||||||||||||||||||| ||||| |   || ||||||||| ||| |||| ||| |||| |||||| |  |||||||||    
T  36948425 cctaaatcattgattgaatttgtaattgactgatgtcaatttttcaataggaattaaacaaacaccgcgacaagacgcgaaatcaaac 36948512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 8443502 - 8443596
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||||| ||| ||| ||||||| |||||||||||    || ||||||||| | ||||||||| |   |||||||| |||||||||    
T  8443502 aaatcattgattgaatatgtgattgactgaagttgatctttcaaattgaaccaaacgaacactgcaacaagacgcggaatcaaacaacgccgcac 8443596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 369 - 403
Target Start/End: Complemental strand, 14585634 - 14585600
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    |||||||||||||||||||||||||||| ||||||    
T  14585634 tatgtgaaaatcacttatttagattgaaagaaaag 14585600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 20553401 - 20553435
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||||||||||||||||| |||||||    
T  20553401 atgtgaaaatcacttatttagattgaaagaaaagg 20553435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 20559901 - 20559935
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||||||||||||||||| |||||||    
T  20559901 atgtgaaaatcacttatttagattgaaagaaaagg 20559935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Original strand, 20571463 - 20571497
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||||||||||||||||| |||||||    
T  20571463 atgtgaaaatcacttatttagattgaaagaaaagg 20571497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 396
Target Start/End: Original strand, 26469348 - 26469378
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaa 396  Q
    |||||||||||||||||||||||||||||||    
T  26469348 atatatgtgaaaatcacttatttagattgaa 26469378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 362 - 404
Target Start/End: Original strand, 33214779 - 33214821
Alignment:
Q  362 cttaatatatgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||| |||||||||||||||| |||||| |||||||    
T  33214779 cttaatatatgcgaaaatcacttatttaaattgaaagaaaagg 33214821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 404
Target Start/End: Complemental strand, 37971226 - 37971192
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||||||||||||||||| |||||||    
T  37971226 atgtgaaaatcacttatttagattgaaagaaaagg 37971192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 370 - 412
Target Start/End: Complemental strand, 41896444 - 41896402
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaaggacaaaatg 412  Q
    ||||||||||||||||||||||||||| |||| ||| ||||||    
T  41896444 atgtgaaaatcacttatttagattgaaagaaagggaaaaaatg 41896402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 471148 - 471241
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||  |||||||||||||||| | | ||| | ||||| |||||||||||||  || ||||||| | |||||||||||   ||||||||||    
T  471148 ttgacgcacaaatcattgattgaatctatgattgagtgaagatgatctttcaataagaaccaaacgagcaccgcaacaagacacaaaatcaaac 471241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Original strand, 14545053 - 14545090
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  14545053 atatatgtgaaaaccacttatttagattgaaagaaaag 14545090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 341
Target Start/End: Original strand, 24099271 - 24099384
Alignment:
Q  229 actgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac-taacgacatacaagacaacgtggtactca 327  Q
    |||||||||||| ||||||||  || |||| |||| |||||||||||||  ||||||||| |||| | ||   |||||  |||| ||||||| | |||||    
T  24099271 actgaagctgatttttcaatatgaaccaaatgaacaccgcaacaagatgcgaaatcaaacaacgcggtacaggacgacgaacaacacaacgtcgcactca 24099370  T
Q  328 gacgaagaaatcac 341  Q
    ||||| ||||||||    
T  24099371 gacgacgaaatcac 24099384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 395
Target Start/End: Original strand, 40619224 - 40619253
Alignment:
Q  366 atatatgtgaaaatcacttatttagattga 395  Q
    ||||||||||||||||||||||||||||||    
T  40619224 atatatgtgaaaatcacttatttagattga 40619253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 3673548 - 3673468
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||||| ||| ||||||||  |||||||||| ||||| |  ||||||||||||| ||  ||| |||| |||||||||||    
T  3673548 ttgacgcccaaagcattgatttgatttgtaattgactgatgtcgatctttcaataggaactaaaggaacaccgcaacaaga 3673468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 5046851 - 5046767
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||| ||||||||||| ||||||| ||||||  |||| ||||||||| || ||||||||  ||  |||||| ||| |||||||||    
T  5046851 aaattattgattgaatctgtaattgactgaatttgatttttcaataggaaccaaacgaataccaaaacaaggtgtgaaatcaaac 5046767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 14585784 - 14585716
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||| | |||||| ||||||||||||| |||  ||||||||||| ||||||||  || |||||||||    
T  14585784 ttgacgtccaaatcaatgattgaatttgtgattgtctgaagctgatatttcaatacgaaccaaacgaac 14585716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 14916178 - 14916262
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||||| | | ||| | ||||| || ||||||||||  || ||||||||| |||||||||||  | |||||||||    
T  14916178 aaatcattgattgaatctctgattgattgaagttggtctttcaatatgaaccaaacgaacaccgcaacaagacatgaaatcaaac 14916262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 26469128 - 26469196
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||||||||||||||| ||  ||||||| ||  |||||||||||||| ||  ||||||||    
T  26469128 ttgacgcccaaatcattgattgaatatgcgattaactaaacttgatctttcaataggaacaaaacgaac 26469196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 3e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 288
Target Start/End: Complemental strand, 19121078 - 19120924
Alignment:
Q  134 gtctataaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactg 232  Q
    ||||| ||||||||||||||||| ||||||| ||||| ||| |||||| | |||| | |   ||||||| ||| |||||||| |||||||||||| ||||    
T  19121078 gtctacaaataatatgataaaacctaagtcaccgaaatattcatgtttctagatctgcagcgttgacgcttaagtcattgatagaatttgtaattgactg 19120979  T
Q  233 aagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||| ||||| || || ||||| ||| ||||||||||| |  |||||||||    
T  19120978 aagctgatc-ttcaaaaggaaacaaacaaacaccgcaacaagacgcgaaatcaaac 19120924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 194 - 341
Target Start/End: Original strand, 19103450 - 19103602
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccg--caacaa--gatgtaaaatcaaact 289  Q
    ||||||||| |||||||||||||||||||| |||  |||||||| ||||||| |||  |||||||||||| |||  ||||||  ||||| |||||||||     
T  19103450 attgacgcccaaatcattgattgaatttgtgattgtctgaagctaatctttcgatacgaatcaaacgaacaccgcacaacaaatgatgtgaaatcaaaca 19103549  T
Q  290 acgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    ||||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  19103550 acgccgcacaagacgactaacaacacaacgtcgcactaagacgacgaaatcac 19103602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 8088196 - 8088298
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||| ||| |||||||||||||||||||||  || | ||||||| | |||||||||||  ||||||||| |||||    
T  8088196 ttgacgtccaaatcattgattgaatctgtgattgactgaagctgatctttcaatatgaa-ccaacgaacactgcaacaagatgccaaatcaaacaacgcc 8088294  T
Q  295 gcac 298  Q
    ||||    
T  8088295 gcac 8088298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 41749428 - 41749337
Alignment:
Q  197 gacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||| |||||||||||||||||| || |||| | ||||| || ||| ||||||| |||||||||||| | |||||||||||| |||||||||    
T  41749428 gacgtctaaatcattgattgaatctggaattgattgaagttggtctctcaataggaatcaaacgaacactgcaacaagatgtgaaatcaaac 41749337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 37986106 - 37986190
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||||| ||||| | ||  ||| |||||||||||||  |||||||||||| |||||||||||||  |||||||||    
T  37986106 aaatcattgattgaatctgtaaatgacaaaagttgatctttcaataagaatcaaacgaacgccgcaacaagatgcgaaatcaaac 37986190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 6217002 - 6216916
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaa 281  Q
    |||||||| |||||||||||||||||||||||| | ||| |  ||||||||||||||||  |||| ||| | || ||||||||||||    
T  6217002 ttgacgcccaaatcattgattgaatttgtaattgattgatgtagatctttcaatagaaactaaacaaacactgcgacaagatgtaaa 6216916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 287
Target Start/End: Original strand, 31391683 - 31391829
Alignment:
Q  142 ataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctgat 240  Q
    ||||||||||||||| ||||||| ||||| | | ||  || |||||| | ||  |||||||| ||||||||| |||||||||||||| ||||| || |||    
T  31391683 ataatatgataaaacctaagtcaccgaaatactcatccttctggatctgcaacgttgacgcccaaatcattggttgaatttgtaattgactgatgccgat 31391782  T
Q  241 ctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    ||||||||| |||  |||| ||| | || ||||||||  ||||||||    
T  31391783 ctttcaataaaaactaaacaaacactgcgacaagatgcgaaatcaaa 31391829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 341
Target Start/End: Original strand, 28540890 - 28541041
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactc--cgcaacaa--gatgtaaaatcaaacta 290  Q
    |||||||| |||||||||||||||||||| |||  |||||||| |||||||||||  || ||||||||| |  | ||||||  ||||  ||||||||| |    
T  28540890 ttgacgcccaaatcattgattgaatttgtgattgtctgaagctaatctttcaatacgaaccaaacgaacaccacacaacaaatgatgcgaaatcaaacaa 28540989  T
Q  291 cgccgcacta-acgacatacaagacaacgtggtactcagacgaagaaatcac 341  Q
    |||||||| | |||||  |||| ||||||| | ||| |||||| ||||||||    
T  28540990 cgccgcacaagacgacgaacaacacaacgtcgcactaagacgatgaaatcac 28541041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 13422038 - 13421982
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    ||||||||| |||||||||||||||||||||||| ||||| |  |||||||||||||    
T  13422038 attgacgcccaaatcattgattgaatttgtaattgactgatgtcgatctttcaatag 13421982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 275
Target Start/End: Original strand, 26878092 - 26878172
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||||| |||||||||||||||| | ||||| ||||| |  |||||||||| |||||| |||||||| |||| ||||||    
T  26878092 ttgacgcccaaatcattgattgaatatctaattgactgatgtcgatctttcaagagaaattaaacgaacaccgcgacaaga 26878172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 41630606 - 41630538
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||||||||||||||||||||||| |||||||  ||||||| ||||| ||  ||||||||    
T  41630606 ttgacgcccaaatcattgattgaatttgtaattgactgaagtcgatcttttaataggaactaaacgaac 41630538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 2979290 - 2979364
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||||| |||||||||||||||||||| |||  |||||| |||||||| ||||  || ||||||||| |||||    
T  2979290 ttgacgcccaaatcattgattgaatttgtgattgtctgaagttgatcttttaatacgaaccaaacgaacaccgca 2979364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 14211331 - 14211257
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||| | ||||||||||||| |||||| |||  ||||||||||||||||||||  || ||||||||| |||||    
T  14211331 ttgacgtccaaatcattgattgcatttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgca 14211257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 39567374 - 39567321
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaat 248  Q
    |||||| | |||||||||||||||||||| |||  |||||||||||||||||||    
T  39567374 ttgacgtccaaatcattgattgaatttgtgattgtctgaagctgatctttcaat 39567321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 227
Target Start/End: Complemental strand, 1409658 - 1409570
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaa-attgacgcctaaatcattgattgaatttgtaatt 227  Q
    |||||||||||| |||  |||||||   ||| ||| ||||||| ||||| | || |||||||| |||||||||||||||||||||||||    
T  1409658 aaataatatgattaaatctaagtcactaaaatattcatgttttcggatctgcaacattgacgcataaatcattgattgaatttgtaatt 1409570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 10722865 - 10722797
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||||||||||||||||| ||| | |||||||  ||||||||||||| ||  ||||||||    
T  10722865 ttgacgcccaaatcattgattgaatttttaaatgactgaagtcgatctttcaataggaactaaacgaac 10722797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 11976928 - 11977012
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    ||||||||| |||||||||||||| ||||| || ||||| ||||||||||  |||| ||| |||| |||||| |  |||||||||    
T  11976928 aaatcattggttgaatttgtaattgactgatgccgatctctcaatagaaaataaacaaacaccgcgacaagacgcgaaatcaaac 11977012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 25980262 - 25980182
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    |||||||| ||||||||| ||||||||||| || ||||| | |||||||||||||| ||  |||| ||| |||| ||||||    
T  25980262 ttgacgcccaaatcattggttgaatttgtagttgactgatgttgatctttcaataggaactaaacaaacaccgcgacaaga 25980182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 275
Target Start/End: Complemental strand, 31316004 - 31315932
Alignment:
Q  203 taaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    ||||| ||||||||||| ||| ||| | |||||||||||||||||||  |||||||| ||| || ||||||||    
T  31316004 taaattattgattgaatatgttattgattgaagctgatctttcaatatgaatcaaacaaacaccacaacaaga 31315932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 35850903 - 35850848
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||  ||||||||| |||||||||||||| ||||| || |||||||||||||    
T  35850903 ttgacgcacaaatcattggttgaatttgtaattgactgatgccgatctttcaatag 35850848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Original strand, 8096651 - 8096689
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  8096651 atatatgtgaaaaccacttatttagattgaaagaaaagg 8096689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 10332539 - 10332665
Alignment:
Q  202 ctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta- 300  Q
    ||||||||| ||| |||| ||| ||| |||||  || |||||||||||  |||||||| ||| | ||||||||| |  ||||||||| | ||||||| |     
T  10332539 ctaaatcatcgatcgaatatgtgattgactgagcctaatctttcaatatgaatcaaacaaacactgcaacaagacgcgaaatcaaacaatgccgcacaag 10332638  T
Q  301 acgacatacaagacaacgtggtactca 327  Q
    |||||| |||| ||||||| |||||||    
T  10332639 acgacaaacaacacaacgtcgtactca 10332665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 404
Target Start/End: Original strand, 11977090 - 11977128
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaagg 404  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  11977090 atatatgtgaaaaccacttatttagattgaaagaaaagg 11977128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 366 - 403
Target Start/End: Complemental strand, 7036163 - 7036126
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaag 403  Q
    ||||||||||||| ||||||||||||||||| ||||||    
T  7036163 atatatgtgaaaaccacttatttagattgaaagaaaag 7036126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 298
Target Start/End: Complemental strand, 28235670 - 28235609
Alignment:
Q  237 tgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||||||||  ||| ||| |||| |||||| |||||| |||||||||| |||||||||    
T  28235670 tgatctttcaataagaataaaatgaacaccgcaagaagatggaaaatcaaacaacgccgcac 28235609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 2979469 - 2979501
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  2979469 tatgtgaaaatcacttatttagattgaaagaaa 2979501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 402
Target Start/End: Complemental strand, 4771075 - 4771039
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaa 402  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  4771075 atatatgtgaaaaccacttatttagattgaaagaaaa 4771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 14211162 - 14211130
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  14211162 tatgtgaaaatcacttatttagattgaaagaaa 14211130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 15571590 - 15571522
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    ||||| || ||||||||||||||||||||| || ||| |||  ||||||||||||| ||  ||||||||    
T  15571590 ttgacacccaaatcattgattgaatttgtagtttactaaagtcgatctttcaatagtaactaaacgaac 15571522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 370 - 402
Target Start/End: Original strand, 24229942 - 24229974
Alignment:
Q  370 atgtgaaaatcacttatttagattgaacgaaaa 402  Q
    ||||||||||||||||||||||||||| |||||    
T  24229942 atgtgaaaatcacttatttagattgaaagaaaa 24229974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 28541069 - 28541101
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  28541069 tatgtgaaaatcacttatttagattgaaagaaa 28541101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 35920989 - 35921073
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||||||| ||| ||| | ||||  |||||||| ||||| || |||| |||| ||||||||||| |  |||||||||    
T  35920989 aaatcattgattgaatctgtgattgattgaatttgatcttttaataggaaacaaatgaacaccgcaacaagacgcgaaatcaaac 35921073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Complemental strand, 39567227 - 39567195
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  39567227 tatgtgaaaatcacttatttagattgaaagaaa 39567195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 26588465 - 26588559
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    |||||||| ||||||| ||| ||| ||||||| |||||||||||||  || ||||||||| ||||||||||| |  ||||||||| |||||||||    
T  26588465 aaatcattaattgaatgtgtgattgactgaagttgatctttcaatatgaaccaaacgaacaccgcaacaagacgggaaatcaaacaacgccgcac 26588559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 140 - 268
Target Start/End: Original strand, 29255374 - 29255503
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||  ||||||| ||||| |   ||||||  ||||| ||||  |||||||| |||||||||||||||||||||||| ||||| |  |    
T  29255374 aaataatatgataaaatctaagtcaccgaaatacccatgtttccggatctgtaacgttgacgcccaaatcattgattgaatttgtaattgactgatgaag 29255473  T
Q  239 atctttcaatagaaatcaaacgaactccgc 268  Q
    |||||||||||| ||  |||||||| ||||    
T  29255474 atctttcaataggaactaaacgaacaccgc 29255503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 140 - 249
Target Start/End: Complemental strand, 8102888 - 8102778
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||  ||| |||||  || ||| |||||| |||||| | ||  |||||||| |||||||||| ||||||||| |||  |||||||||    
T  8102888 aaataatatgataaaatctaaatcatcagaatattcatgtttctggatctgcaacgttgacgcccaaatcattgaatgaatttgtgattgtctgaagctg 8102789  T
Q  239 atctttcaata 249  Q
    |||||||||||    
T  8102788 atctttcaata 8102778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 204 - 297
Target Start/End: Complemental strand, 679206 - 679113
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgca 297  Q
    |||||||||||||||| ||| ||| |||||| |||| ||||||||| ||| ||||||||  || |||||||| | ||||  |||||||||||||    
T  679206 aaatcattgattgaatatgtgattgactgaaactgacctttcaataaaaaccaaacgaataccacaacaagacgcaaaactaaactacgccgca 679113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 6957256 - 6957163
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||| |||||||||||||||||||| ||| ||| |||||||  ||||| ||||| ||||||||| |||| | ||||||||| || |||| ||||    
T  6957256 ttgatgcctaaatcattgattgaatctgttattgactgaagtcgatctatcaatggaaatcaaatgaacactgcaacaagacgtgaaatgaaac 6957163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 288
Target Start/End: Complemental strand, 34018722 - 34018573
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    |||||||||||||||||||||||||  |||| | | ||| ||  ||||| | ||  |||||||| ||||||||  ||||||||||||||||||||    |    
T  34018722 aaataatatgataaaacataagtcactgaaatactcatgcttccggatctgcaacgttgacgcccaaatcattagttgaatttgtaattaactgatctcg 34018623  T
Q  239 atctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||| ||  |||||||| |||| ||||||  | |||||||||    
T  34018622 atctttcaataggaactaaacgaacaccgcgacaagacatgaaatcaaac 34018573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 11321462 - 11321546
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||| ||||||||||||||||||| ||||| |  ||||||||||||| ||  |||||||| || |||||||| || |||||||||    
T  11321462 aaataattgattgaatttgtaattgactgatgtcgatctttcaataggaactaaacgaacaccacaacaagacgtgaaatcaaac 11321546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 14801933 - 14801865
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||| |||||||||||||||||||| |||  |||||||| |||||||||||  || |||||||||    
T  14801933 ttgacgcccaaatcattgattgaatttgtgattgtctgaagctaatctttcaatacgaaccaaacgaac 14801865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 298
Target Start/End: Original strand, 528334 - 528437
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||||| |||| ||||||| ||| ||||||| ||||||||||||||||| |||  ||  |||| ||| | |||||||||   |||||||||| |||||    
T  528334 ttgacgcccaaataattgattaaatatgtaatttactgaagctgatctttcgataagaacgaaacaaacactgcaacaagacacaaaatcaaacaacgcc 528433  T
Q  295 gcac 298  Q
    ||||    
T  528434 gcac 528437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 546137 - 546062
Alignment:
Q  195 ttgacgcctaaatcattgattgaattt-gtaattaactgaagctgatctttcaatagaaatcaaacgaactccgca 269  Q
    |||||||| |||||||||||||||||| || |||  ||||||||||||||||||||  || ||||||||| |||||    
T  546137 ttgacgcccaaatcattgattgaattttgtgattgtctgaagctgatctttcaatacgaaccaaacgaacaccgca 546062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 31296926 - 31296823
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| |||||||||  ||||||| |   ||| |||||| ||||| ||||||||  ||||||| |||| | ||||||||||| |||||||||| |||||    
T  31296926 ttgacgtctaaatcatcaattgaatattggattgactgaaactgatttttcaatatgaatcaaatgaacactgcaacaagatgcaaaatcaaacaacgcc 31296827  T
Q  295 gcac 298  Q
    ||||    
T  31296826 gcac 31296823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 140 - 249
Target Start/End: Complemental strand, 30894761 - 30894652
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||| ||| ||||||||| |  | || || |||||| ||||  |||||||| ||||||||| |||||||||||||| ||||| |  |    
T  30894761 aaataatatgataaaacctaattcatcgaaatacca-tgcttctggatctgtaacgttgacgcccaaatcattggttgaatttgtaattgactgatgtcg 30894663  T
Q  239 atctttcaata 249  Q
    |||||||||||    
T  30894662 atctttcaata 30894652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 249
Target Start/End: Complemental strand, 23128715 - 23128670
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaata 249  Q
    |||||||||||||||||||||||| ||||| | |||||||||||||    
T  23128715 aaatcattgattgaatttgtaattgactgatgttgatctttcaata 23128670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 362 - 402
Target Start/End: Original strand, 11321618 - 11321658
Alignment:
Q  362 cttaatatatgtgaaaatcacttatttagattgaacgaaaa 402  Q
    ||||||||||||||||| ||||||||||||||||| |||||    
T  11321618 cttaatatatgtgaaaaccacttatttagattgaaagaaaa 11321658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 127775 - 127720
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatag 250  Q
    |||||||| ||||||||||| |||||||||||| ||||| |  |||||||||||||    
T  127775 ttgacgcccaaatcattgatcgaatttgtaattgactgatgtcgatctttcaatag 127720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 22571572 - 22571477
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctga-tctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    ||||||||| |||||||||||||  ||||||||||| | ||||||||  || ||||||||| ||  ||||| | | |||||||||| |||||||||    
T  22571572 aaatcattggttgaatttgtaatcgactgaagctgattttttcaatattaaccaaacgaacaccataacaaaacgcaaaatcaaacaacgccgcac 22571477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 298
Target Start/End: Complemental strand, 30493638 - 30493535
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgcc 294  Q
    |||||| | |||||||||||||||| ||  ||| ||||||| |||||||||||||  || ||||||||| ||  ||||||||   ||||||||| ||||     
T  30493638 ttgacgtccaaatcattgattgaatatgagattgactgaagttgatctttcaatatgaaccaaacgaacaccagaacaagatacgaaatcaaacaacgct 30493539  T
Q  295 gcac 298  Q
    ||||    
T  30493538 gcac 30493535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 249
Target Start/End: Complemental strand, 30776766 - 30776715
Alignment:
Q  198 acgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaata 249  Q
    ||||| |||||||||| ||||||||| |||  ||||||||||||||||||||    
T  30776766 acgcccaaatcattgaatgaatttgtgattgtctgaagctgatctttcaata 30776715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 396
Target Start/End: Original strand, 4984694 - 4984724
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaa 396  Q
    |||||||||||||||||||||||||||||||    
T  4984694 atatatgtgaaaatcacttatttagattgaa 4984724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 366 - 396
Target Start/End: Original strand, 9508832 - 9508862
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaa 396  Q
    |||||||||||||||||||||||||||||||    
T  9508832 atatatgtgaaaatcacttatttagattgaa 9508862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 20225953 - 20225899
Alignment:
Q  199 cgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 253  Q
    |||| |||||||||||||||||||||| | | ||||| ||||||| |||||||||    
T  20225953 cgccaaaatcattgattgaatttgtaactgaatgaagttgatcttccaatagaaa 20225899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 253
Target Start/End: Complemental strand, 22119937 - 22119883
Alignment:
Q  199 cgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaa 253  Q
    |||| |||||||||||||||||||||| | | ||||| ||||||| |||||||||    
T  22119937 cgccaaaatcattgattgaatttgtaactgaatgaagttgatcttccaatagaaa 22119883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 342
Target Start/End: Complemental strand, 28981272 - 28981135
Alignment:
Q  206 atcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-acga 304  Q
    |||||||||||||| ||| ||| ||| || || |||||| ||||  || ||||||||| || |||||||||  |||||||||| || |||||  | ||||    
T  28981272 atcattgattgaatctgtgattgactaaaactaatctttgaatatgaaccaaacgaacaccacaacaagatacaaaatcaaacaacaccgcagaagacga 28981173  T
Q  305 catacaagacaacgtggtactcagacgaagaaatcaca 342  Q
    |  |||| ||||||  ||||||||||||  ||||||||    
T  28981172 cgaacaacacaacgccgtactcagacgataaaatcaca 28981135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 34185677 - 34185770
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| | ||||||||||||||||| || || | |||||| |||||||||||||  ||  ||| |||| || |||||||| | ||||||||||    
T  34185677 ttgacgtccaaatcattgattgaattcgtgatcacctgaagttgatctttcaatatgaactaaaagaacaccacaacaagacgcaaaatcaaac 34185770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 7515186 - 7515218
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaatt 227  Q
    |||||||||||||||||| ||||||||||||||    
T  7515186 ttgacgcctaaatcattggttgaatttgtaatt 7515218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 298
Target Start/End: Complemental strand, 12653026 - 12652966
Alignment:
Q  238 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    ||||||||||||  ||||||| |||| |||||  |||||| |||||||||| |||||||||    
T  12653026 gatctttcaatatgaatcaaatgaacaccgcacgaagatggaaaatcaaacaacgccgcac 12652966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 23947313 - 23947373
Alignment:
Q  238 gatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcac 298  Q
    ||||||||||||  ||||||| |||| |||||| ||||||  ||||||||| |||||||||    
T  23947313 gatctttcaatatgaatcaaatgaacaccgcaaaaagatgggaaatcaaacaacgccgcac 23947373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 28981113 - 28981069
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaa 410  Q
    ||||||||| ||||||||||||||||||||| |||| ||| ||||    
T  28981113 atatatgtggaaatcacttatttagattgaaagaaagggaaaaaa 28981069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 30608667 - 30608711
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaa 410  Q
    ||||||||||||| |||| |||||||||||| |||||||| ||||    
T  30608667 atatatgtgaaaaccactaatttagattgaaagaaaaggagaaaa 30608711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 195 - 288
Target Start/End: Complemental strand, 1449 - 1356
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||| |||| |||| | |||||||||||| ||||| || ||||||||||||| ||  |||||||| ||||||||||| |  |||||||||    
T  1449 ttgacgcccaaattattggtcgaatttgtaattgactgatgccgatctttcaataggaactaaacgaacaccgcaacaagacgcgaaatcaaac 1356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 275
Target Start/End: Original strand, 1747 - 1883
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    |||||||||||||||| |||||||||||||| |   ||| ||  ||||| | ||  |||  ||| |||||||||||||||||||||||| || || |  |    
T  1747 aaataatatgataaaatataagtcatcgaaatacccatgcttccggatctgcaacgttggtgcccaaatcattgattgaatttgtaatttaccgatgtcg 1846  T
Q  239 atctttcaatagaaatcaaacgaactccgcaacaaga 275  Q
    ||||| |||||||||| |||||||| |||| ||||||    
T  1847 atcttccaatagaaattaaacgaacaccgcgacaaga 1883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 287
Target Start/End: Original strand, 58072 - 58164
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaa 287  Q
    |||||| | ||||||| |||||||| ||| ||| |||||||||||||||||| ||  || ||||| ||| ||||||||||| | |||||||||    
T  58072 ttgacgtccaaatcatcgattgaatctgtgattgactgaagctgatctttcagtatgaaacaaacaaacaccgcaacaagacgcaaaatcaaa 58164  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 366 - 415
Target Start/End: Original strand, 58233 - 58282
Alignment:
Q  366 atatatgtgaaaatcacttatttagattgaacgaaaaggacaaaatgatg 415  Q
    ||||||||| ||||||||||||||||||||| |||||||| |||| ||||    
T  58233 atatatgtggaaatcacttatttagattgaaagaaaaggaaaaaaggatg 58282  T

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Target: scaffold0884 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 140 - 288
Target Start/End: Original strand, 1901 - 2050
Alignment:
Q  140 aaataatatgataaaacataagtcatcgaaaaattaatgtttttggatccgtaaa-ttgacgcctaaatcattgattgaatttgtaattaactgaagctg 238  Q
    ||||||||||||||||| ||| ||| ||||| | | ||||||| ||||| | ||  |||||||| ||| ||||| |||||||||||||| ||| | |  |    
T  1901 aaataatatgataaaacctaaatcaccgaaatacttatgttttcggatctgcaacgttgacgcccaaaccattggttgaatttgtaattgactaatgtag 2000  T
Q  239 atctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||||||||| ||  |||  ||| |||| ||||||||  |||||||||    
T  2001 atctttcaataggaactaaaaaaacaccgcgacaagatgcgaaatcaaac 2050  T

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Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 194 - 231
Target Start/End: Complemental strand, 36931 - 36894
Alignment:
Q  194 attgacgcctaaatcattgattgaatttgtaattaact 231  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  36931 attgacgcccaaatcattgattgaatttgtaattaact 36894  T

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Target: scaffold0042 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 92480 - 92573
Alignment:
Q  195 ttgacgcctaaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaac 288  Q
    |||||| | |||||||||||||||| ||| ||| ||| ||  |||||||||||||  || ||||||||| || |||||||| || |||||||||    
T  92480 ttgacgtccaaatcattgattgaatctgtgatttactaaaattgatctttcaatatgaaccaaacgaacaccacaacaagacgtgaaatcaaac 92573  T

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Target: scaffold0888 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 263
Target Start/End: Original strand, 1671 - 1730
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaac 263  Q
    |||||||||||||||||||| |||  |||||| |||||||||||||  || |||||||||    
T  1671 aaatcattgattgaatttgtgattgtctgaagttgatctttcaatacgaaccaaacgaac 1730  T

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Target: scaffold0888; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 369 - 401
Target Start/End: Original strand, 1831 - 1863
Alignment:
Q  369 tatgtgaaaatcacttatttagattgaacgaaa 401  Q
    |||||||||||||||||||||||||||| ||||    
T  1831 tatgtgaaaatcacttatttagattgaaagaaa 1863  T

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Target: scaffold0347 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 204 - 343
Target Start/End: Complemental strand, 6126 - 5986
Alignment:
Q  204 aaatcattgattgaatttgtaattaactgaagctgatctttcaatagaaatcaaacgaactccgcaacaagatgtaaaatcaaactacgccgcacta-ac 302  Q
    |||||||||||||||| ||| ||| ||||||| | |  ||||||||  || |||| |||| ||||||||| | |  ||||||||| ||||||||| | ||    
T  6126 aaatcattgattgaatatgtgattgactgaagttaacatttcaatatgaaccaaatgaacaccgcaacaatacgcgaaatcaaacaacgccgcacaagac 6027  T
Q  303 gacatacaagacaacgtggtactcagacgaagaaatcacac 343  Q
    |||  |||| ||| | | | |||||||||| ||||||||||    
T  6026 gacgaacaacacatcattgcactcagacgacgaaatcacac 5986  T

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