View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1787_low_51 (Length: 270)
Name: NF1787_low_51
Description: NF1787
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1787_low_51 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 23 - 257
Target Start/End: Complemental strand, 41878640 - 41878405
Alignment:
| Q |
23 |
ttatttatgtttatgatgtatgtcataaaatacaaagtgtaaggtggtttt-atttataggaggtttatacaatacaaagttagaatgtgctggaagtaa |
121 |
Q |
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| T |
41878640 |
ttatttatgtttatgatgtatgttatacaatacaaagtgcaaggtggtttttatttataggaggtttatacaatacaaagttagaatgtgctggaagtaa |
41878541 |
T |
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| Q |
122 |
tataggttgagaattcttgtatttgctagaaaattctatgctacgtgacacagctatgcactgtcacgtgtaagtaataagattgatcatattaattaac |
221 |
Q |
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| T |
41878540 |
tataggttgagaattcttgtatttgctagaaaattctatgctacgtgacacagctatgcactgtcacgtgtaagtaataagattgatcatattaattaac |
41878441 |
T |
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| Q |
222 |
atgttcattcattttctacacactatttgggtcttc |
257 |
Q |
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| T |
41878440 |
atgttcattcattttctacacactatttgggtcttc |
41878405 |
T |
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